>TRPE_SCHPO (O94582) Probable anthranilate synthase component 1 (EC 4.1.3.27)|
           (Anthranilate synthase component I)
          Length = 489

 Score = 30.0 bits (66), Expect = 5.0
 Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 8/82 (9%)
 Frame = -3

Query: 573 QTAALKLAICDDIG---ERSYDFADVAAILVQILLRHPAVGSEAFRKRY-----KIDVDS 418
           QT  +   +C   G   E +Y+ A     +++  L  P +     +K +     K +V  
Sbjct: 153 QTVKIISHVCIQQGRPIEEAYEAAVFKINMLKKKLESPEIPLPEQKKVHLGYEAKSNVGE 212

Query: 417 DCGKLFVTKLSVHLFNGDTTQA 352
           D  K FV+ L  H+FNGD  QA
Sbjct: 213 DGYKAFVSNLKEHIFNGDIFQA 234

>MAGC3_HUMAN (Q8TD91) Melanoma-associated antigen C3 (MAGE-C3 antigen)|
           (Hepatocellular carcinoma-associated antigen 2)
          Length = 643

 Score = 30.0 bits (66), Expect = 5.0
 Identities = 19/40 (47%), Positives = 22/40 (55%)
 Frame = +1

Query: 190 REIVLSLRYKGHCDQRAS*V*SLVKCCVYCSCWRSLQGNP 309
           RE+ L LR  G  DQR     SLV C  Y   WR+L G+P
Sbjct: 60  REVRLFLR-GGTSDQRMD---SLVLCPTYFKLWRTLSGSP 95

>PURL_LACCA (P35852) Phosphoribosylformylglycinamidine synthase II (EC 6.3.5.3)|
           (FGAM synthase II)
          Length = 740

 Score = 29.6 bits (65), Expect = 6.5
 Identities = 36/129 (27%), Positives = 46/129 (35%)
 Frame = -3

Query: 519 DFADVAAILVQILLRHPAVGSEAFRKRYKIDVDSDCGKLFVTKLSVHLFNGDTTQAAFRI 340
           D  DV  IL+         G+E + KR +  V S    L +T      F   T   AF  
Sbjct: 464 DSKDVTCILIA-----GGCGNECWLKRARNLVASGAEPLGITDCLN--FGDPTKPEAFYE 516

Query: 339 LSDFRKGRFGWVALERPPT*TINTTLYQRSYSRRTLITMSFVAQ**DNFSGPQPMCGMRN 160
           L++  KG          P  + N +LY  +                     P PM GM  
Sbjct: 517 LAEAAKGIIAATKAFNAPVISGNVSLYNETNGEAIY---------------PTPMIGMVG 561

Query: 159 LIEDRVTIT 133
           LIED  TIT
Sbjct: 562 LIEDLSTIT 570

>Y1583_PASMU (Q9CKM8) Hypothetical protein PM1583 precursor|
          Length = 204

 Score = 29.6 bits (65), Expect = 6.5
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = +2

Query: 191 EKLSYHCATKDIVINVRREYDL 256
           E++S +C TKD +IN R  YD+
Sbjct: 94  ERVSTNCKTKDTIINTRTRYDV 115

>RDRP_BSNV (Q8AZL8) RNA-directed RNA polymerase (EC 2.7.7.48) (RDRP) (Protein|
           VP1)
          Length = 867

 Score = 29.6 bits (65), Expect = 6.5
 Identities = 14/45 (31%), Positives = 24/45 (53%)
 Frame = +2

Query: 317 LPFRKSDKMRKAAWVVSPLNKWTESFVTNNLPQSLSTSILYRFRN 451
           L F K+++  K AW+    N W+  F T+ L  ++S  I+   +N
Sbjct: 305 LLFPKAERYEKKAWLTKTRNIWSAPFPTHLLLSTISWPIMNSSKN 349

>YHC1_YEAST (P23180) Hypothetical 53.1 kDa protein in SPO11-OPI1 intergenic|
           region
          Length = 465

 Score = 29.6 bits (65), Expect = 6.5
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = +2

Query: 422 STSILYRFRNASEPTAGCLNNICTRMAATSAK 517
           ST+I +    +S+P + C NN+  R A+ SAK
Sbjct: 46  STTITFSMEESSKPVSVCFNNVFLRDASHSAK 77

>YDA6_SCHPO (Q10348) Putative endonuclease C1F12.06c (EC 3.1.-.-)|
          Length = 252

 Score = 29.3 bits (64), Expect = 8.5
 Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 6/51 (11%)
 Frame = -2

Query: 313 WLGCLGETSNMNNKHNTLPEIILTTHVDHNVL------CSAMIGQFLWTST 179
           +L C+G T +++    TL + +L    DH +L       S ++G  +WTS+
Sbjct: 145 YLHCVGLTESLDAHRETLKKHVLKKTTDHPILIHSIDQSSEILGAAVWTSS 195

>TRUB_HELMO (Q8GB99) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA|
           pseudouridine 55 synthase) (Psi55 synthase)
           (tRNA-uridine isomerase) (tRNA pseudouridylate synthase)
           (Fragment)
          Length = 307

 Score = 29.3 bits (64), Expect = 8.5
 Identities = 20/64 (31%), Positives = 27/64 (42%)
 Frame = +3

Query: 327 GSRTRCGKLLGWYLH*TSGLRAS*QTICRSHCLHRSCIVFEMPQNQQPDVLTISAQEWLP 506
           G R  CG ++GW +   SG             L  SC + E+ Q   P+ L +S  E L 
Sbjct: 188 GQRLGCGAIMGWLIRRRSG----------PFRLQNSCTLKELEQGLAPEKL-VSPGEVLQ 236

Query: 507 HQQN 518
           H  N
Sbjct: 237 HLPN 240

>C11B1_RAT (P15393) Cytochrome P450 11B1, mitochondrial precursor (EC|
           1.14.15.4) (CYPXIB1) (P450C11) (Steroid
           11-beta-hydroxylase) (P450(11 beta)-DS)
          Length = 499

 Score = 29.3 bits (64), Expect = 8.5
 Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 6/42 (14%)
 Frame = -2

Query: 271 HNTLPEIILTTHVDHNVLCSAMIGQFL------WTSTYVWNE 164
           H+  PE +  TH  H++  S     FL      WTST VW E
Sbjct: 214 HDLKPESVTFTHALHSMFKSTTQLMFLPKSLTRWTSTRVWKE 255


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 82,575,714
Number of Sequences: 219361
Number of extensions: 1686982
Number of successful extensions: 3939
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3858
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3939
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4929664480
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)