>dbj|AK063573.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-117-G09, full
            insert sequence
          Length = 1420

 Score =  182 bits (92), Expect = 8e-43
 Identities = 251/304 (82%)
 Strand = Plus / Minus

                                                                        
Query: 275  attgttcatgttggaggtctctccaaggcaacccaaccaaatctgcctttccggaagtcg 334
            |||| ||||||||| |||||||||| ||| || || |||||| ||||||||||| |||| 
Sbjct: 1135 attgctcatgttgggggtctctccagggccacgcagccaaatttgcctttccggtagtca 1076

                                                                        
Query: 335  gacaagatgcggaaagctgcttgggtggtatctccattgaacaagtggactgagagcttc 394
            |||||||||||||| ||||||||| ||| |||||||||||||||||| || |||||||| 
Sbjct: 1075 gacaagatgcggaaggctgcttggctggcatctccattgaacaagtgaacagagagcttt 1016

                                                                        
Query: 395  gtgacaaacaatttgccgcagtcactgtctacatcgatcttgtatcgttttcgaaatgcc 454
            || ||||||| ||| || || || ||||| |  || | | | || ||| ||||||| || 
Sbjct: 1015 gtcacaaacattttaccacaatcgctgtccatgtcaagcctatagcgtcttcgaaacgct 956

                                                                        
Query: 455  tcagaaccaacagccggatgtcttaacaatatctgcacaagaatggctgccacatcagca 514
            ||||  || ||||| |||||||| |  |||| ||| || ||||| |||||||||||||||
Sbjct: 955  tcagggcctacagctggatgtctcactaataactgtacgagaatcgctgccacatcagca 896

                                                                        
Query: 515  aaatcatatgatctttctccgatatcatcacagatagcaagcttaagagcagctgtctga 574
            || ||||| || |||||||| ||||||||||| |||||||| || |  ||||||||||| 
Sbjct: 895  aagtcatacgacctttctcctatatcatcacatatagcaagtttgattgcagctgtctgg 836

                
Query: 575  tcac 578
            ||||
Sbjct: 835  tcac 832

>ref|XM_475272.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1116

 Score =  180 bits (91), Expect = 3e-42
 Identities = 247/299 (82%)
 Strand = Plus / Minus

                                                                        
Query: 280  tcatgttggaggtctctccaaggcaacccaaccaaatctgcctttccggaagtcggacaa 339
            ||||||||| |||||||||| ||| || || |||||| ||||||||||| |||| |||||
Sbjct: 1116 tcatgttgggggtctctccagggccacgcagccaaatttgcctttccggtagtcagacaa 1057

                                                                        
Query: 340  gatgcggaaagctgcttgggtggtatctccattgaacaagtggactgagagcttcgtgac 399
            ||||||||| ||||||||| ||| |||||||||||||||||| || |||||||| || ||
Sbjct: 1056 gatgcggaaggctgcttggctggcatctccattgaacaagtgaacagagagctttgtcac 997

                                                                        
Query: 400  aaacaatttgccgcagtcactgtctacatcgatcttgtatcgttttcgaaatgcctcaga 459
            ||||| ||| || || || ||||| |  || | | | || ||| ||||||| || |||| 
Sbjct: 996  aaacattttaccacaatcgctgtccatgtcaagcctatagcgtcttcgaaacgcttcagg 937

                                                                        
Query: 460  accaacagccggatgtcttaacaatatctgcacaagaatggctgccacatcagcaaaatc 519
             || ||||| |||||||| |  |||| ||| || ||||| ||||||||||||||||| ||
Sbjct: 936  gcctacagctggatgtctcactaataactgtacgagaatcgctgccacatcagcaaagtc 877

                                                                       
Query: 520  atatgatctttctccgatatcatcacagatagcaagcttaagagcagctgtctgatcac 578
            ||| || |||||||| ||||||||||| |||||||| || |  ||||||||||| ||||
Sbjct: 876  atacgacctttctcctatatcatcacatatagcaagtttgattgcagctgtctggtcac 818

>gb|AC130600.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0048I21,
              complete sequence
          Length = 137650

 Score =  129 bits (65), Expect = 1e-26
 Identities = 113/129 (87%)
 Strand = Plus / Plus

                                                                          
Query: 275    attgttcatgttggaggtctctccaaggcaacccaaccaaatctgcctttccggaagtcg 334
              |||| ||||||||| |||||||||| ||| || || |||||| ||||||||||| |||| 
Sbjct: 109696 attgctcatgttgggggtctctccagggccacgcagccaaatttgcctttccggtagtca 109755

                                                                          
Query: 335    gacaagatgcggaaagctgcttgggtggtatctccattgaacaagtggactgagagcttc 394
              |||||||||||||| ||||||||| ||| |||||||||||||||||| || |||||||| 
Sbjct: 109756 gacaagatgcggaaggctgcttggctggcatctccattgaacaagtgaacagagagcttt 109815

                       
Query: 395    gtgacaaac 403
              || ||||||
Sbjct: 109816 gtcacaaac 109824



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 97/115 (84%)
 Strand = Plus / Plus

                                                                          
Query: 464    acagccggatgtcttaacaatatctgcacaagaatggctgccacatcagcaaaatcatat 523
              ||||| |||||||| |  |||| ||| || ||||| ||||||||||||||||| ||||| 
Sbjct: 110102 acagctggatgtctcactaataactgtacgagaatcgctgccacatcagcaaagtcatac 110161

                                                                     
Query: 524    gatctttctccgatatcatcacagatagcaagcttaagagcagctgtctgatcac 578
              || |||||||| ||||||||||| |||||||| || |  ||||||||||| ||||
Sbjct: 110162 gacctttctcctatatcatcacatatagcaagtttgattgcagctgtctggtcac 110216

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  129 bits (65), Expect = 1e-26
 Identities = 113/129 (87%)
 Strand = Plus / Plus

                                                                            
Query: 275      attgttcatgttggaggtctctccaaggcaacccaaccaaatctgcctttccggaagtcg 334
                |||| ||||||||| |||||||||| ||| || || |||||| ||||||||||| |||| 
Sbjct: 20982918 attgctcatgttgggggtctctccagggccacgcagccaaatttgcctttccggtagtca 20982977

                                                                            
Query: 335      gacaagatgcggaaagctgcttgggtggtatctccattgaacaagtggactgagagcttc 394
                |||||||||||||| ||||||||| ||| |||||||||||||||||| || |||||||| 
Sbjct: 20982978 gacaagatgcggaaggctgcttggctggcatctccattgaacaagtgaacagagagcttt 20983037

                         
Query: 395      gtgacaaac 403
                || ||||||
Sbjct: 20983038 gtcacaaac 20983046



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 97/115 (84%)
 Strand = Plus / Plus

                                                                            
Query: 464      acagccggatgtcttaacaatatctgcacaagaatggctgccacatcagcaaaatcatat 523
                ||||| |||||||| |  |||| ||| || ||||| ||||||||||||||||| ||||| 
Sbjct: 20983324 acagctggatgtctcactaataactgtacgagaatcgctgccacatcagcaaagtcatac 20983383

                                                                       
Query: 524      gatctttctccgatatcatcacagatagcaagcttaagagcagctgtctgatcac 578
                || |||||||| ||||||||||| |||||||| || |  ||||||||||| ||||
Sbjct: 20983384 gacctttctcctatatcatcacatatagcaagtttgattgcagctgtctggtcac 20983438

>gb|U80032.1| Caenorhabditis elegans cosmid C32E12, complete sequence
          Length = 45389

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 363   tatctccattgaacaagtgga 383
             |||||||||||||||||||||
Sbjct: 21135 tatctccattgaacaagtgga 21115

>gb|BC060268.1| Mus musculus gene model 444, (NCBI), mRNA (cDNA clone IMAGE:6416369),
            partial cds
          Length = 3630

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 532  tccgatatcatcacagatagc 552
            |||||||||||||||||||||
Sbjct: 3094 tccgatatcatcacagatagc 3114

>gb|AC117693.9| Mus musculus chromosome 1, clone RP23-448D22, complete sequence
          Length = 193386

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 41     ctttcacatgctaatacatatccag 65
              ||||||||||||||| |||||||||
Sbjct: 125249 ctttcacatgctaatgcatatccag 125225

>ref|XM_990700.1| PREDICTED: Mus musculus gene model 444, (NCBI) (Gm444), mRNA
          Length = 4434

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 532  tccgatatcatcacagatagc 552
            |||||||||||||||||||||
Sbjct: 3310 tccgatatcatcacagatagc 3330

>ref|XM_144253.6| PREDICTED: Mus musculus gene model 444, (NCBI) (Gm444), mRNA
          Length = 4428

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 532  tccgatatcatcacagatagc 552
            |||||||||||||||||||||
Sbjct: 3304 tccgatatcatcacagatagc 3324

>ref|XM_908279.2| PREDICTED: Mus musculus gene model 444, (NCBI) (Gm444), mRNA
          Length = 4428

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 532  tccgatatcatcacagatagc 552
            |||||||||||||||||||||
Sbjct: 3304 tccgatatcatcacagatagc 3324

>gb|AC158757.6| Mus musculus chromosome 5, clone RP23-64D3, complete sequence
          Length = 247058

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 532    tccgatatcatcacagatagc 552
              |||||||||||||||||||||
Sbjct: 142886 tccgatatcatcacagatagc 142906

>gb|AC110909.10| Mus musculus chromosome 7, clone RP24-186G5, complete sequence
          Length = 161738

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 288   gaggtctctccaaggcaacc 307
             ||||||||||||||||||||
Sbjct: 12633 gaggtctctccaaggcaacc 12652

>gb|AC149779.3| Bos taurus  BAC CH240-5F6 (Children's Hospital Oakland Research Institute
              Bovine BAC Library (male)) complete sequence
          Length = 181013

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 10     tgtaacagcttacaaatata 29
              ||||||||||||||||||||
Sbjct: 102105 tgtaacagcttacaaatata 102086

>gb|AC140235.3| Mus musculus BAC clone RP24-272D15 from chromosome 7, complete sequence
          Length = 185617

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 548   atagcaagcttaagagcagc 567
             ||||||||||||||||||||
Sbjct: 65487 atagcaagcttaagagcagc 65468

>gb|AC121995.2| Mus musculus BAC clone RP24-310M4 from 7, complete sequence
          Length = 126991

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 548   atagcaagcttaagagcagc 567
             ||||||||||||||||||||
Sbjct: 38276 atagcaagcttaagagcagc 38295

>gb|AC146308.2| Medicago truncatula clone mth2-10a12, complete sequence
          Length = 112733

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 513   caaaatcatatgatctttctccga 536
             |||||||||||||||||| |||||
Sbjct: 77931 caaaatcatatgatctttgtccga 77954

>gb|AC137554.15| Medicago truncatula clone mth2-17j18, complete sequence
          Length = 121248

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 513   caaaatcatatgatctttctccga 536
             |||||||||||||||||| |||||
Sbjct: 92149 caaaatcatatgatctttgtccga 92126

>gb|AC165244.2| Mus musculus BAC clone RP24-498C9 from chromosome 14, complete
            sequence
          Length = 191747

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 279  ttcatgttggaggtctctcc 298
            ||||||||||||||||||||
Sbjct: 8807 ttcatgttggaggtctctcc 8788

>emb|AL359642.12| Human DNA sequence from clone RP11-507F17 on chromosome 9 Contains a
            kertain pseudogene, complete sequence
          Length = 122613

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 154  aattagattcctcattccac 173
            ||||||||||||||||||||
Sbjct: 5056 aattagattcctcattccac 5037

>gb|AC132315.4| Mus musculus BAC clone RP24-234J3 from chromosome 12, complete sequence
          Length = 181828

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 59    tatccagctcagacctctag 78
             ||||||||||||||||||||
Sbjct: 37051 tatccagctcagacctctag 37070

>dbj|AK162557.1| Mus musculus 16 days neonate cerebellum cDNA, RIKEN full-length
            enriched library, clone:9630006P13 product:hypothetical
            protein, full insert sequence
          Length = 1547

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 548  atagcaagcttaagagcagc 567
            ||||||||||||||||||||
Sbjct: 1056 atagcaagcttaagagcagc 1037

>gb|AC156033.6| Mus musculus BAC clone RP23-377G8 from chromosome 12, complete
            sequence
          Length = 216718

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 59   tatccagctcagacctctag 78
            ||||||||||||||||||||
Sbjct: 4393 tatccagctcagacctctag 4374

>gb|AC142245.14| Mus musculus chromosome 15, clone RP23-82J20, complete sequence
          Length = 242954

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 270   tgtttattgttcatgttgga 289
             ||||||||||||||||||||
Sbjct: 66065 tgtttattgttcatgttgga 66046

>emb|BX469891.9| Zebrafish DNA sequence from clone CH211-226B21 in linkage group 2,
             complete sequence
          Length = 175261

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 267   ttgtgtttattgttcatgtt 286
             ||||||||||||||||||||
Sbjct: 40150 ttgtgtttattgttcatgtt 40131

>emb|AL928927.10| Zebrafish DNA sequence from clone CH211-113H16, complete sequence
          Length = 168805

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 264   gtgttgtgtttattgttcatgttg 287
             ||||| ||||||||||||||||||
Sbjct: 39083 gtgttttgtttattgttcatgttg 39106

>emb|AL928835.6| Zebrafish DNA sequence from clone CH211-201P7 in linkage group 1,
             complete sequence
          Length = 182427

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 264   gtgttgtgtttattgttcatgttg 287
             ||||| ||||||||||||||||||
Sbjct: 97299 gtgttttgtttattgttcatgttg 97276

>gb|AC114988.21| Mus musculus chromosome 7, clone RP23-207N5, complete sequence
          Length = 196013

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 288    gaggtctctccaaggcaacc 307
              ||||||||||||||||||||
Sbjct: 189427 gaggtctctccaaggcaacc 189446


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,340,855
Number of Sequences: 3902068
Number of extensions: 4340855
Number of successful extensions: 78342
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 78275
Number of HSP's gapped (non-prelim): 67
length of query: 578
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 555
effective length of database: 17,143,297,704
effective search space: 9514530225720
effective search space used: 9514530225720
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)