ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd16k24
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1MYB1_PHYPA (P80074) Myb-related protein Pp1 (Fragment) 27 9.3

>MYB1_PHYPA (P80074) Myb-related protein Pp1 (Fragment)|
          Length = 449

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 15/49 (30%), Positives = 22/49 (44%)
 Frame = +1

Query: 91  LLLXSYLDTGERPQIHNNLKXFLPLPAASKPGGGLRCSWSPAATDHXFS 237
           ++L S     ER     +    LPLP     G  +  + SP+AT+  FS
Sbjct: 215 MILPSPAQISERLMASRHCDSLLPLPRIDLAGSNIFPAQSPSATESSFS 263


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,199,856
Number of Sequences: 219361
Number of extensions: 414859
Number of successful extensions: 761
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 754
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 761
length of database: 80,573,946
effective HSP length: 99
effective length of database: 58,857,207
effective search space used: 1412572968
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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