Clone Name | rbasd16k10 |
---|---|
Clone Library Name | barley_pub |
>AAT_PYRHO (O58489) Aspartate aminotransferase (EC 2.6.1.1) (Transaminase A)| (AspAT) Length = 391 Score = 33.1 bits (74), Expect = 0.19 Identities = 19/71 (26%), Positives = 33/71 (46%) Frame = -2 Query: 217 EXIRERVQDLVINRKLLVEAMSPLGEDAVKGGXGAIYLWAKLPDNCKDDFEVVRWLATKH 38 + + E ++ RK++V+ + + VK GA Y++ + + WL K Sbjct: 288 KAVEEMKKEYNERRKIVVKRLKNMPGIKVKEPKGAFYVFPNISGTGMSSEKFSEWLLEKA 347 Query: 37 GVAVIPGSASG 5 V VIPG+A G Sbjct: 348 RVVVIPGTAFG 358
>AAT_SYNY3 (Q55128) Aspartate aminotransferase (EC 2.6.1.1) (Transaminase A)| (ASPAT) Length = 389 Score = 31.6 bits (70), Expect = 0.56 Identities = 18/69 (26%), Positives = 32/69 (46%) Frame = -2 Query: 211 IRERVQDLVINRKLLVEAMSPLGEDAVKGGXGAIYLWAKLPDNCKDDFEVVRWLATKHGV 32 + V+ R+++VE ++ + + GA Y++ + + E L H V Sbjct: 290 VETMVKAFTERRQVIVEGINQIAGLSCPNPKGAFYVFVDIAKTGLNSLEFSARLLESHQV 349 Query: 31 AVIPGSASG 5 AVIPG+A G Sbjct: 350 AVIPGAAFG 358
>AAT_PYRAB (Q9V0L2) Aspartate aminotransferase (EC 2.6.1.1) (Transaminase A)| (AspAT) Length = 389 Score = 31.2 bits (69), Expect = 0.73 Identities = 20/71 (28%), Positives = 36/71 (50%) Frame = -2 Query: 217 EXIRERVQDLVINRKLLVEAMSPLGEDAVKGGXGAIYLWAKLPDNCKDDFEVVRWLATKH 38 + + E ++ RKL+ + ++ +G VK GA Y++ ++ D E + + Sbjct: 285 KAVEEMRKEYDRRRKLVWKRLNEMGLPTVKP-KGAFYIFPRIKDTGLTSKEFSELMLMEA 343 Query: 37 GVAVIPGSASG 5 VAV+PGSA G Sbjct: 344 KVAVVPGSAFG 354
>NEC2_RAT (P28841) Neuroendocrine convertase 2 precursor (EC 3.4.21.94) (NEC| 2) (PC2) (Prohormone convertase 2) (Proprotein convertase 2) (KEX2-like endoprotease 2) Length = 637 Score = 29.6 bits (65), Expect = 2.1 Identities = 20/61 (32%), Positives = 31/61 (50%) Frame = -2 Query: 253 QRLALYSLXAGPEXIRERVQDLVINRKLLVEAMSPLGEDAVKGGXGAIYLWAKLPDNCKD 74 Q + +YS GP + V R+L ++AM+ G + +GG G+IY+WA D Sbjct: 259 QLIDIYSASWGPTDNGKTVDG---PRELTLQAMAD-GVNKGRGGKGSIYVWASGDGGSYD 314 Query: 73 D 71 D Sbjct: 315 D 315
>NEC2_PIG (Q03333) Neuroendocrine convertase 2 precursor (EC 3.4.21.94) (NEC| 2) (PC2) (Prohormone convertase 2) (Proprotein convertase 2) (KEX2-like endoprotease 2) Length = 638 Score = 29.6 bits (65), Expect = 2.1 Identities = 20/61 (32%), Positives = 31/61 (50%) Frame = -2 Query: 253 QRLALYSLXAGPEXIRERVQDLVINRKLLVEAMSPLGEDAVKGGXGAIYLWAKLPDNCKD 74 Q + +YS GP + V R+L ++AM+ G + +GG G+IY+WA D Sbjct: 260 QLIDIYSASWGPTDNGKTVDG---PRELTLQAMAD-GVNKGRGGKGSIYVWASGDGGSYD 315 Query: 73 D 71 D Sbjct: 316 D 316
>NEC2_MOUSE (P21661) Neuroendocrine convertase 2 precursor (EC 3.4.21.94) (NEC| 2) (PC2) (Prohormone convertase 2) (Proprotein convertase 2) (KEX2-like endoprotease 2) Length = 637 Score = 29.6 bits (65), Expect = 2.1 Identities = 20/61 (32%), Positives = 31/61 (50%) Frame = -2 Query: 253 QRLALYSLXAGPEXIRERVQDLVINRKLLVEAMSPLGEDAVKGGXGAIYLWAKLPDNCKD 74 Q + +YS GP + V R+L ++AM+ G + +GG G+IY+WA D Sbjct: 259 QLIDIYSASWGPTDNGKTVDG---PRELTLQAMAD-GVNKGRGGKGSIYVWASGDGGSYD 314 Query: 73 D 71 D Sbjct: 315 D 315
>NEC2_HUMAN (P16519) Neuroendocrine convertase 2 precursor (EC 3.4.21.94) (NEC| 2) (PC2) (Prohormone convertase 2) (Proprotein convertase 2) (KEX2-like endoprotease 2) Length = 638 Score = 29.6 bits (65), Expect = 2.1 Identities = 20/61 (32%), Positives = 31/61 (50%) Frame = -2 Query: 253 QRLALYSLXAGPEXIRERVQDLVINRKLLVEAMSPLGEDAVKGGXGAIYLWAKLPDNCKD 74 Q + +YS GP + V R+L ++AM+ G + +GG G+IY+WA D Sbjct: 260 QLIDIYSASWGPTDNGKTVDG---PRELTLQAMAD-GVNKGRGGKGSIYVWASGDGGSYD 315 Query: 73 D 71 D Sbjct: 316 D 316
>YE5A_SCHPO (O14174) Hypothetical protein C4D7.10c in chromosome I| Length = 473 Score = 29.3 bits (64), Expect = 2.8 Identities = 10/18 (55%), Positives = 12/18 (66%) Frame = +2 Query: 176 PVYHEILHPFPDXLWASL 229 PVYH +L P P+ LW L Sbjct: 174 PVYHTVLRPTPETLWQDL 191
>YBDL_ECOLI (P77806) Aminotransferase ybdL (EC 2.6.1.-)| Length = 386 Score = 28.9 bits (63), Expect = 3.6 Identities = 11/19 (57%), Positives = 13/19 (68%) Frame = -2 Query: 76 DDFEVVRWLATKHGVAVIP 20 DD E +WL +HGVA IP Sbjct: 333 DDVEFCQWLTQEHGVAAIP 351
>V70K_TYMVA (P20131) 69 kDa protein| Length = 628 Score = 28.5 bits (62), Expect = 4.7 Identities = 19/58 (32%), Positives = 22/58 (37%) Frame = +3 Query: 3 PPLALPGITATPCLVASHLTTSKSSLQLSGSLAQR*MAPXPPLTASSPRGDIASTSSF 176 PP ALP I T H + K +L G P P SP D+ T SF Sbjct: 405 PPAALPPIAYTSGRGKIHHSLPKGALPKEGPPPPPRRLPSPATPPQSPLRDLGRTPSF 462
>DSBE_CHRVI (Q46476) Thiol:disulfide interchange protein dsbE (Cytochrome c| biogenesis protein ccmG) Length = 165 Score = 28.1 bits (61), Expect = 6.1 Identities = 20/78 (25%), Positives = 31/78 (39%), Gaps = 3/78 (3%) Frame = -2 Query: 247 LALYSLXAGPEXIRERVQDLVINRKLLVEAMSP---LGEDAVKGGXGAIYLWAKLPDNCK 77 L Y L P I + D L + P L D + G + +WA +C+ Sbjct: 20 LLFYGLQLDPRKIPSPLVDKPAPEFSLPDLKDPNQTLTRDILIGQVSLVNVWASWCPSCR 79 Query: 76 DDFEVVRWLATKHGVAVI 23 + + +A +HGV VI Sbjct: 80 QEHAELMRIAREHGVRVI 97
>SYW_CLOAB (Q97LD6) Tryptophanyl-tRNA synthetase (EC 6.1.1.2)| (Tryptophan--tRNA ligase) (TrpRS) Length = 335 Score = 28.1 bits (61), Expect = 6.1 Identities = 14/52 (26%), Positives = 25/52 (48%) Frame = -2 Query: 181 NRKLLVEAMSPLGEDAVKGGXGAIYLWAKLPDNCKDDFEVVRWLATKHGVAV 26 N+K++ + P GE + GAI W KL +D+++ + H + V Sbjct: 4 NKKVIFSGIQPSGELTIGNYFGAIKNWVKL----QDEYDCYYCIVDLHAITV 51
>WNK4_MOUSE (Q80UE6) Serine/threonine-protein kinase WNK4 (EC 2.7.11.1) (Protein| kinase with no lysine 4) (Protein kinase, lysine-deficient 4) Length = 1222 Score = 27.7 bits (60), Expect = 8.0 Identities = 25/84 (29%), Positives = 34/84 (40%) Frame = +3 Query: 6 PLALPGITATPCLVASHLTTSKSSLQLSGSLAQR*MAPXPPLTASSPRGDIASTSSFRFI 185 P +LP TA P L + S SL + ++AQ ++P P L + SP S Sbjct: 894 PPSLPSTTAAPLLSLA----SAFSLAVM-TVAQSLLSPSPGLLSQSPPAPPGPLPSLPLS 948 Query: 186 TRSCTLSLXHSGPAXNEYRARRCP 257 SC + A E A R P Sbjct: 949 LASCDQESLSAQTAETENEASRNP 972
>TENS1_HUMAN (Q9HBL0) Tensin-1| Length = 1735 Score = 27.7 bits (60), Expect = 8.0 Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 6/41 (14%) Frame = +3 Query: 3 PPLALPGITATPCLVASHLTTSKS------SLQLSGSLAQR 107 PP +LPG+TA P L T+ S L L G +A R Sbjct: 835 PPASLPGLTAQPLLSPKEATSDPSRTPEEEPLNLEGLVAHR 875
>AGI_HORVU (P15312) Root-specific lectin precursor| Length = 212 Score = 27.7 bits (60), Expect = 8.0 Identities = 15/35 (42%), Positives = 16/35 (45%), Gaps = 1/35 (2%) Frame = -1 Query: 200 GARSRDKP-EAACGGNVSPWRGCCQGWXGCHLPLG 99 GA S DKP A GG V CC W C + G Sbjct: 150 GACSTDKPCGKAAGGKVCTNNYCCSKWGSCGIGPG 184
>NAS35_CAEEL (P98060) Zinc metalloproteinase nas-35 precursor (EC 3.4.24.21)| (Nematode astacin 35) (Dumpy protein 31) (Tollish protein 2) Length = 592 Score = 27.7 bits (60), Expect = 8.0 Identities = 15/42 (35%), Positives = 19/42 (45%) Frame = -1 Query: 239 VLIXGWPRVXQGKGARSRDKPEAACGGNVSPWRGCCQGWXGC 114 VL + R +G AR+R PEA + SPW C C Sbjct: 468 VLFRSFYRGGKGFEARARAVPEAGNWNSWSPWTACSATCGAC 509
>HEP_DROME (Q23977) Dual specificity mitogen-activated protein kinase kinase| hemipterous (EC 2.7.12.2) (MAPKK) Length = 1178 Score = 27.7 bits (60), Expect = 8.0 Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 1/58 (1%) Frame = +3 Query: 3 PPLALPGITATPCLVASHLTTSKSSLQLSG-SLAQR*MAPXPPLTASSPRGDIASTSS 173 PPLA AT A L S+ SG S+AQR P PP+ ++P G +++SS Sbjct: 50 PPLATSASAATSATHAPSL--GAGSVSGSGISIAQR---PAPPVPHATPFGSASASSS 102
>YFDZ_ECOLI (P77434) Hypothetical aminotransferase yfdZ (EC 2.6.1.-)| Length = 412 Score = 27.7 bits (60), Expect = 8.0 Identities = 21/85 (24%), Positives = 38/85 (44%), Gaps = 2/85 (2%) Frame = -2 Query: 253 QRLALYSLXAGPEXIRERVQDLVINRKLLVEAMSPLGEDAVKGGXGAIYLWAKLPD--NC 80 Q A+ +L + +R+ + R +LV+ + G V+ ++Y+WAK+P+ Sbjct: 282 QVAAIAALEGDQQCVRDIAEQYKRRRDVLVKGLHEAGW-MVEMPKASMYVWAKIPEPYAA 340 Query: 79 KDDFEVVRWLATKHGVAVIPGSASG 5 E + L + V V PG G Sbjct: 341 MGSLEFAKKLLNEAKVCVSPGIGFG 365
>PALY_MALDO (P35512) Phenylalanine ammonia-lyase (EC 4.3.1.5) (Fragment)| Length = 235 Score = 27.7 bits (60), Expect = 8.0 Identities = 11/26 (42%), Positives = 15/26 (57%), Gaps = 1/26 (3%) Frame = -1 Query: 176 EAACGGNV-SPWRGCCQGWXGCHLPL 102 +A C G + P GC +GW G LP+ Sbjct: 209 QAICQGKIIDPILGCLEGWNGAPLPI 234
>AAT_AQUAE (O67781) Aspartate aminotransferase (EC 2.6.1.1) (Transaminase A)| (ASPAT) Length = 394 Score = 27.7 bits (60), Expect = 8.0 Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 4/62 (6%) Frame = -2 Query: 178 RKLLVEAMSPL-GEDAVKGGXGAIYLW---AKLPDNCKDDFEVVRWLATKHGVAVIPGSA 11 R VE +S + G D VK GA Y++ + + D ++ +L K VAV+PGSA Sbjct: 304 RDTAVEELSKIPGMDVVKP-EGAFYIFPDFSAYAEKLGGDVKLSEFLLEKAKVAVVPGSA 362 Query: 10 SG 5 G Sbjct: 363 FG 364 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 37,245,174 Number of Sequences: 219361 Number of extensions: 701827 Number of successful extensions: 2203 Number of sequences better than 10.0: 20 Number of HSP's better than 10.0 without gapping: 2156 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2203 length of database: 80,573,946 effective HSP length: 64 effective length of database: 66,534,842 effective search space used: 1596836208 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)