ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd16k01 |
|---|---|
| Clone Library Name | barley_pub |
>RK21_ARATH (P51412) 50S ribosomal protein L21, chloroplast precursor (CL21)| Length = 220 Score = 164 bits (415), Expect = 2e-40 Identities = 80/120 (66%), Positives = 93/120 (77%) Frame = -3 Query: 592 KDADIFAVVMIGSRQYIVMPGRYIYTQRLKDANVNDQIILNKVLLVSTRDKAYIGMPVVT 413 K +IFAV+M+G RQYIV PGRY+YTQRLKDANV+DQI+LNKVLLV T+ YIG PVVT Sbjct: 96 KREEIFAVIMVGGRQYIVFPGRYLYTQRLKDANVDDQIVLNKVLLVGTKTHTYIGKPVVT 155 Query: 412 NAAVHAIVEEQGLDDXXXXXXXXXXXKYQRKAGHRQPNTRLRITGISGYEEYPADPILQV 233 NA VHA+VE QGL+D KY+R GHRQPNTR+RITGI+GYEEYPA P + V Sbjct: 156 NATVHAVVESQGLNDKVVVFKYKPKKKYRRNIGHRQPNTRIRITGITGYEEYPASPNVAV 215
>RK21_SPIOL (P24613) 50S ribosomal protein L21, chloroplast precursor (CL21)| (CS-L7) Length = 256 Score = 152 bits (383), Expect = 1e-36 Identities = 74/114 (64%), Positives = 89/114 (78%) Frame = -3 Query: 583 DIFAVVMIGSRQYIVMPGRYIYTQRLKDANVNDQIILNKVLLVSTRDKAYIGMPVVTNAA 404 +IFAVV+IGSRQYIV+PGR+IYTQRLK A VND+I+LNKVLLV T+ YIG P+VTNAA Sbjct: 122 EIFAVVVIGSRQYIVIPGRWIYTQRLKGATVNDKIVLNKVLLVGTKASTYIGTPIVTNAA 181 Query: 403 VHAIVEEQGLDDXXXXXXXXXXXKYQRKAGHRQPNTRLRITGISGYEEYPADPI 242 VHA+VEEQ LDD Y+R GHRQP TR++ITGI+GYE+YPA + Sbjct: 182 VHAVVEEQLLDDKVIVFKYKKKKNYRRNIGHRQPITRIKITGITGYEDYPASTL 235
>RM21_ARATH (Q8L9A0) 50S ribosomal protein L21, mitochondrial precursor| Length = 270 Score = 94.0 bits (232), Expect = 4e-19 Identities = 49/118 (41%), Positives = 72/118 (61%) Frame = -3 Query: 580 IFAVVMIGSRQYIVMPGRYIYTQRLKDANVNDQIILNKVLLVSTRDKAYIGMPVVTNAAV 401 +FA+V IGS Q+ V G I+T++LK ++ND++ L KVLL+ + + IG P++ +A V Sbjct: 140 VFAIVQIGSHQFKVSNGDSIFTEKLKFCDINDKLELTKVLLLGSASQTIIGRPILPDATV 199 Query: 400 HAIVEEQGLDDXXXXXXXXXXXKYQRKAGHRQPNTRLRITGISGYEEYPADPILQVPA 227 HA+VEE LD+ Y+R GHRQ T+LRIT I G E+ P I+ P+ Sbjct: 200 HAVVEEHALDEKVLIFKKKRRKNYRRTRGHRQELTKLRITDIQGIEK-PEPKIVHKPS 256
>RL21_STAES (Q8CS87) 50S ribosomal protein L21| Length = 102 Score = 58.9 bits (141), Expect = 1e-08 Identities = 37/103 (35%), Positives = 52/103 (50%) Frame = -3 Query: 580 IFAVVMIGSRQYIVMPGRYIYTQRLKDANVNDQIILNKVLLVSTRDKAYIGMPVVTNAAV 401 +FA++ G +Q V G+ IY ++L +AN D +KVL V D +G P V A+V Sbjct: 1 MFAIIETGGKQIKVEEGQEIYVEKL-NANEGDSFTFDKVLFVGG-DSVKVGAPTVEGASV 58 Query: 400 HAIVEEQGLDDXXXXXXXXXXXKYQRKAGHRQPNTRLRITGIS 272 A V +QG +RK GHRQP T+L I I+ Sbjct: 59 TATVNKQGRGKKITVFTYKRRKDSKRKKGHRQPYTKLTIDKIN 101
>RL21_STAEQ (Q5HNQ4) 50S ribosomal protein L21| Length = 102 Score = 58.9 bits (141), Expect = 1e-08 Identities = 37/103 (35%), Positives = 52/103 (50%) Frame = -3 Query: 580 IFAVVMIGSRQYIVMPGRYIYTQRLKDANVNDQIILNKVLLVSTRDKAYIGMPVVTNAAV 401 +FA++ G +Q V G+ IY ++L +AN D +KVL V D +G P V A+V Sbjct: 1 MFAIIETGGKQIKVEEGQEIYVEKL-NANEGDSFTFDKVLFVGG-DSVKVGAPTVEGASV 58 Query: 400 HAIVEEQGLDDXXXXXXXXXXXKYQRKAGHRQPNTRLRITGIS 272 A V +QG +RK GHRQP T+L I I+ Sbjct: 59 TATVNKQGRGKKITVFTYKRRKDSKRKKGHRQPYTKLTIDKIN 101
>RL21_STAS1 (Q49Y85) 50S ribosomal protein L21| Length = 102 Score = 58.2 bits (139), Expect = 2e-08 Identities = 36/103 (34%), Positives = 52/103 (50%) Frame = -3 Query: 580 IFAVVMIGSRQYIVMPGRYIYTQRLKDANVNDQIILNKVLLVSTRDKAYIGMPVVTNAAV 401 +FA++ G +Q V G+ I+ ++L D N D +KVL V D +G P V A+V Sbjct: 1 MFAIIETGGKQVKVEEGQEIFVEKL-DVNEGDSFTFDKVLFVGG-DAVKVGAPTVEGASV 58 Query: 400 HAIVEEQGLDDXXXXXXXXXXXKYQRKAGHRQPNTRLRITGIS 272 A V++QG +RK GHRQP T+L I I+ Sbjct: 59 TATVQKQGRGKKITVFTYKRRKDSKRKKGHRQPYTKLTIDKIN 101
>RL21_STAHJ (Q4L6Z3) 50S ribosomal protein L21| Length = 102 Score = 57.0 bits (136), Expect = 5e-08 Identities = 36/102 (35%), Positives = 49/102 (48%) Frame = -3 Query: 580 IFAVVMIGSRQYIVMPGRYIYTQRLKDANVNDQIILNKVLLVSTRDKAYIGMPVVTNAAV 401 +FA++ G +Q V G+ I+ ++L D N D +KVL V D +G P V A V Sbjct: 1 MFAIIETGGKQIKVEEGQEIFVEKL-DVNEGDSFTFDKVLFVGG-DSVKVGAPTVEGATV 58 Query: 400 HAIVEEQGLDDXXXXXXXXXXXKYQRKAGHRQPNTRLRITGI 275 A V +QG +RK GHRQP T+L I I Sbjct: 59 TATVNKQGRGKKITVFTYKRRKDSKRKKGHRQPYTKLTIDKI 100
>RL21_STAAW (Q7A0Q2) 50S ribosomal protein L21| Length = 102 Score = 57.0 bits (136), Expect = 5e-08 Identities = 36/103 (34%), Positives = 50/103 (48%) Frame = -3 Query: 580 IFAVVMIGSRQYIVMPGRYIYTQRLKDANVNDQIILNKVLLVSTRDKAYIGMPVVTNAAV 401 +FA++ G +Q V G+ I+ ++L D N D +KVL V D +G P V A V Sbjct: 1 MFAIIETGGKQIKVEEGQEIFVEKL-DVNEGDTFTFDKVLFVGG-DSVKVGAPTVEGATV 58 Query: 400 HAIVEEQGLDDXXXXXXXXXXXKYQRKAGHRQPNTRLRITGIS 272 A V +QG +RK GHRQP T+L I I+ Sbjct: 59 TATVNKQGRGKKITVFTYKRRKNSKRKKGHRQPYTKLTIDKIN 101
>RL21_STAAS (Q6G8S2) 50S ribosomal protein L21| Length = 102 Score = 57.0 bits (136), Expect = 5e-08 Identities = 36/103 (34%), Positives = 50/103 (48%) Frame = -3 Query: 580 IFAVVMIGSRQYIVMPGRYIYTQRLKDANVNDQIILNKVLLVSTRDKAYIGMPVVTNAAV 401 +FA++ G +Q V G+ I+ ++L D N D +KVL V D +G P V A V Sbjct: 1 MFAIIETGGKQIKVEEGQEIFVEKL-DVNEGDTFTFDKVLFVGG-DSVKVGAPTVEGATV 58 Query: 400 HAIVEEQGLDDXXXXXXXXXXXKYQRKAGHRQPNTRLRITGIS 272 A V +QG +RK GHRQP T+L I I+ Sbjct: 59 TATVNKQGRGKKITVFTYKRRKNSKRKKGHRQPYTKLTIDKIN 101
>RL21_STAAR (Q6GG57) 50S ribosomal protein L21| Length = 102 Score = 57.0 bits (136), Expect = 5e-08 Identities = 36/103 (34%), Positives = 50/103 (48%) Frame = -3 Query: 580 IFAVVMIGSRQYIVMPGRYIYTQRLKDANVNDQIILNKVLLVSTRDKAYIGMPVVTNAAV 401 +FA++ G +Q V G+ I+ ++L D N D +KVL V D +G P V A V Sbjct: 1 MFAIIETGGKQIKVEEGQEIFVEKL-DVNEGDTFTFDKVLFVGG-DSVKVGAPTVEGATV 58 Query: 400 HAIVEEQGLDDXXXXXXXXXXXKYQRKAGHRQPNTRLRITGIS 272 A V +QG +RK GHRQP T+L I I+ Sbjct: 59 TATVNKQGRGKKITVFTYKRRKNSKRKKGHRQPYTKLTIDKIN 101
>RL21_STAAN (Q7A583) 50S ribosomal protein L21| Length = 102 Score = 57.0 bits (136), Expect = 5e-08 Identities = 36/103 (34%), Positives = 50/103 (48%) Frame = -3 Query: 580 IFAVVMIGSRQYIVMPGRYIYTQRLKDANVNDQIILNKVLLVSTRDKAYIGMPVVTNAAV 401 +FA++ G +Q V G+ I+ ++L D N D +KVL V D +G P V A V Sbjct: 1 MFAIIETGGKQIKVEEGQEIFVEKL-DVNEGDTFTFDKVLFVGG-DSVKVGAPTVEGATV 58 Query: 400 HAIVEEQGLDDXXXXXXXXXXXKYQRKAGHRQPNTRLRITGIS 272 A V +QG +RK GHRQP T+L I I+ Sbjct: 59 TATVNKQGRGKKITVFTYKRRKNSKRKKGHRQPYTKLTIDKIN 101
>RL21_STAAM (Q99TK6) 50S ribosomal protein L21| Length = 102 Score = 57.0 bits (136), Expect = 5e-08 Identities = 36/103 (34%), Positives = 50/103 (48%) Frame = -3 Query: 580 IFAVVMIGSRQYIVMPGRYIYTQRLKDANVNDQIILNKVLLVSTRDKAYIGMPVVTNAAV 401 +FA++ G +Q V G+ I+ ++L D N D +KVL V D +G P V A V Sbjct: 1 MFAIIETGGKQIKVEEGQEIFVEKL-DVNEGDTFTFDKVLFVGG-DSVKVGAPTVEGATV 58 Query: 400 HAIVEEQGLDDXXXXXXXXXXXKYQRKAGHRQPNTRLRITGIS 272 A V +QG +RK GHRQP T+L I I+ Sbjct: 59 TATVNKQGRGKKITVFTYKRRKNSKRKKGHRQPYTKLTIDKIN 101
>RL21_STAAC (Q5HFB6) 50S ribosomal protein L21| Length = 102 Score = 57.0 bits (136), Expect = 5e-08 Identities = 36/103 (34%), Positives = 50/103 (48%) Frame = -3 Query: 580 IFAVVMIGSRQYIVMPGRYIYTQRLKDANVNDQIILNKVLLVSTRDKAYIGMPVVTNAAV 401 +FA++ G +Q V G+ I+ ++L D N D +KVL V D +G P V A V Sbjct: 1 MFAIIETGGKQIKVEEGQEIFVEKL-DVNEGDTFTFDKVLFVGG-DSVKVGAPTVEGATV 58 Query: 400 HAIVEEQGLDDXXXXXXXXXXXKYQRKAGHRQPNTRLRITGIS 272 A V +QG +RK GHRQP T+L I I+ Sbjct: 59 TATVNKQGRGKKITVFTYKRRKNSKRKKGHRQPYTKLTIDKIN 101
>RL21_STAAU (Q93EP0) 50S ribosomal protein L21| Length = 102 Score = 56.2 bits (134), Expect = 8e-08 Identities = 36/103 (34%), Positives = 49/103 (47%) Frame = -3 Query: 580 IFAVVMIGSRQYIVMPGRYIYTQRLKDANVNDQIILNKVLLVSTRDKAYIGMPVVTNAAV 401 +FA++ G +Q V G+ I+ ++L D N D +KVL V D +G P V A V Sbjct: 1 MFAIIETGGKQIKVEEGQEIFVEKL-DVNEGDTFTFDKVLFVGG-DSVKVGAPTVEGATV 58 Query: 400 HAIVEEQGLDDXXXXXXXXXXXKYQRKAGHRQPNTRLRITGIS 272 A V +QG RK GHRQP T+L I I+ Sbjct: 59 TATVNKQGRGKKITVFTYKRRKNSXRKKGHRQPYTKLTIDKIN 101
>RL21_MYCPN (P78026) 50S ribosomal protein L21| Length = 100 Score = 54.3 bits (129), Expect = 3e-07 Identities = 32/97 (32%), Positives = 53/97 (54%) Frame = -3 Query: 574 AVVMIGSRQYIVMPGRYIYTQRLKDANVNDQIILNKVLLVSTRDKAYIGMPVVTNAAVHA 395 A+V+ GS+QY+V + ++L +A V +I L+KVL++ + IG P + A V Sbjct: 3 AIVVCGSKQYLVHENDTFFVEKL-EAPVGKEIQLDKVLMLDEK----IGAPYLEKARVVC 57 Query: 394 IVEEQGLDDXXXXXXXXXXXKYQRKAGHRQPNTRLRI 284 +VE+ GL + +K GHRQP T+L++ Sbjct: 58 VVEKHGLQRKVNVIKHISQKHHLKKYGHRQPYTKLKV 94
>RL21_RICPR (Q9ZCI9) 50S ribosomal protein L21| Length = 105 Score = 53.9 bits (128), Expect = 4e-07 Identities = 33/104 (31%), Positives = 54/104 (51%), Gaps = 1/104 (0%) Frame = -3 Query: 580 IFAVVMIGSRQYIVMPGRYIYTQRLKDANVNDQIILNKVLLVSTRDK-AYIGMPVVTNAA 404 +FAV+ G +QY V I +++ D + +I +++L++ K ++IG P+V A Sbjct: 1 MFAVIKAGGKQYKVDRNSVIKVEKI-DGELGSKIQFDQILMIGEYSKPSFIGTPIVKGAI 59 Query: 403 VHAIVEEQGLDDXXXXXXXXXXXKYQRKAGHRQPNTRLRITGIS 272 V A + Q D+ Y+RKAGHRQ T L+I I+ Sbjct: 60 VTAEITNQLKDNKIIAFKKKRRKNYRRKAGHRQELTELKILDIT 103
>RL21_THET8 (P60492) 50S ribosomal protein L21| Length = 101 Score = 53.5 bits (127), Expect = 5e-07 Identities = 38/104 (36%), Positives = 51/104 (49%) Frame = -3 Query: 580 IFAVVMIGSRQYIVMPGRYIYTQRLKDANVNDQIILNKVLLVSTRDKAYIGMPVVTNAAV 401 +FA+V G +QY V PG + ++L DA + L +LL +K +G PVV A+V Sbjct: 1 MFAIVKTGGKQYRVEPGLKLRVEKL-DAEPGATVELPVLLLGG--EKTVVGTPVVEGASV 57 Query: 400 HAIVEEQGLDDXXXXXXXXXXXKYQRKAGHRQPNTRLRITGISG 269 A V G +Y+RK GHRQP T L I I G Sbjct: 58 VAEVLGHGRGKKILVSKFKAKVQYRRKKGHRQPYTELLIKEIRG 101
>RL21_MYCGE (P47474) 50S ribosomal protein L21| Length = 100 Score = 52.8 bits (125), Expect = 9e-07 Identities = 29/97 (29%), Positives = 52/97 (53%) Frame = -3 Query: 574 AVVMIGSRQYIVMPGRYIYTQRLKDANVNDQIILNKVLLVSTRDKAYIGMPVVTNAAVHA 395 A+V+ G++QY+V I+ ++L V +I L+KVL++ + IG P + A V Sbjct: 3 AIVVCGAKQYLVHENESIFVEKLA-GKVGQEIQLDKVLMLDEK----IGKPYLEKAKVVC 57 Query: 394 IVEEQGLDDXXXXXXXXXXXKYQRKAGHRQPNTRLRI 284 ++E+ GL + ++ GHRQP T+L++ Sbjct: 58 VIEKHGLKSKIKLIKHISQKHHLKRYGHRQPYTKLKV 94
>RL21_LAWIN (O87886) 50S ribosomal protein L21| Length = 102 Score = 52.4 bits (124), Expect = 1e-06 Identities = 31/102 (30%), Positives = 50/102 (49%) Frame = -3 Query: 580 IFAVVMIGSRQYIVMPGRYIYTQRLKDANVNDQIILNKVLLVSTRDKAYIGMPVVTNAAV 401 ++A++ G +Q+ V G I+ ++ DA V +I +K+ ++ IG P + NA V Sbjct: 1 MYAIIEAGGKQFCVEEGSKIFVSKI-DAEVGTEIFFDKIFMIGG-SSPQIGTPYINNAKV 58 Query: 400 HAIVEEQGLDDXXXXXXXXXXXKYQRKAGHRQPNTRLRITGI 275 A V E G D ++ GHRQ T L++TGI Sbjct: 59 IAKVLEHGRDKKILVFKKWRRNDSRKLQGHRQDYTALKVTGI 100
>RL21_SYNY3 (P74266) 50S ribosomal protein L21| Length = 124 Score = 51.6 bits (122), Expect = 2e-06 Identities = 35/102 (34%), Positives = 46/102 (45%) Frame = -3 Query: 577 FAVVMIGSRQYIVMPGRYIYTQRLKDANVNDQIILNKVLLVSTRDKAYIGMPVVTNAAVH 398 +A++ IG Q V PGR+ L DA D +++KVLLV D IG P V A V Sbjct: 3 YAIIEIGGTQIRVEPGRFYEINHL-DAAPEDSYVVDKVLLVKDGDNVTIGQPYVAGATVE 61 Query: 397 AIVEEQGLDDXXXXXXXXXXXKYQRKAGHRQPNTRLRITGIS 272 + K ++K GHRQ TRL + IS Sbjct: 62 GEILSHRRGRKVIVYKMQPKKKTRKKRGHRQELTRLLVKSIS 103
>RL21_CHLPN (Q9Z806) 50S ribosomal protein L21| Length = 106 Score = 50.8 bits (120), Expect = 3e-06 Identities = 32/101 (31%), Positives = 45/101 (44%) Frame = -3 Query: 577 FAVVMIGSRQYIVMPGRYIYTQRLKDANVNDQIILNKVLLVSTRDKAYIGMPVVTNAAVH 398 +AV+ GS+QY V G I + L + + ++I VL V KA +G P + NA V Sbjct: 4 YAVIQTGSKQYQVRSGDVIDVELLGEVASDKEVIFQDVLFVFDGTKASLGSPTIANAQVK 63 Query: 397 AIVEEQGLDDXXXXXXXXXXXKYQRKAGHRQPNTRLRITGI 275 A + Y RK GHRQ R++I I Sbjct: 64 AEYLSHVKGEKVVAYKYKKRKNYHRKHGHRQKYLRVKIREI 104
>RL21_THEMA (Q9X1G9) 50S ribosomal protein L21| Length = 105 Score = 48.5 bits (114), Expect = 2e-05 Identities = 29/102 (28%), Positives = 48/102 (47%) Frame = -3 Query: 580 IFAVVMIGSRQYIVMPGRYIYTQRLKDANVNDQIILNKVLLVSTRDKAYIGMPVVTNAAV 401 ++A+V RQY V G+ +YT++ KD + D+I+ ++V+ V + +G P V A V Sbjct: 2 LYAIVETAGRQYRVEEGKILYTEKQKDYSPGDEIVFDRVVFVRKDGEVLVGKPYVEGAKV 61 Query: 400 HAIVEEQGLDDXXXXXXXXXXXKYQRKAGHRQPNTRLRITGI 275 V E + + GHRQ T ++I I Sbjct: 62 VGKVLEHAKARKVKTVKYRPRKNSKVEKGHRQWYTAIKIEKI 103
>RL21_BACSU (P26908) 50S ribosomal protein L21 (BL20)| Length = 102 Score = 48.5 bits (114), Expect = 2e-05 Identities = 31/103 (30%), Positives = 48/103 (46%) Frame = -3 Query: 580 IFAVVMIGSRQYIVMPGRYIYTQRLKDANVNDQIILNKVLLVSTRDKAYIGMPVVTNAAV 401 ++A++ G +Q V G+ +Y ++L A + + VL V D +G P V A V Sbjct: 1 MYAIIKTGGKQIKVEEGQTVYIEKLA-AEAGETVTFEDVLFVGG-DNVKVGNPTVEGATV 58 Query: 400 HAIVEEQGLDDXXXXXXXXXXXKYQRKAGHRQPNTRLRITGIS 272 A VE+QG +K GHRQP T++ I I+ Sbjct: 59 TAKVEKQGRAKKITVFRYKPKKNVHKKQGHRQPYTKVTIEKIN 101
>RL21_SYNP7 (Q9Z3H5) 50S ribosomal protein L21| Length = 127 Score = 48.1 bits (113), Expect = 2e-05 Identities = 32/102 (31%), Positives = 47/102 (46%) Frame = -3 Query: 577 FAVVMIGSRQYIVMPGRYIYTQRLKDANVNDQIILNKVLLVSTRDKAYIGMPVVTNAAVH 398 +A++ +Q V PGR+ RL DA+++ + L+KVLLV IG P V A V Sbjct: 3 YAIIEASGKQLWVEPGRFYDLDRL-DADLDQSLTLDKVLLVQDEGAPQIGQPYVAGATVQ 61 Query: 397 AIVEEQGLDDXXXXXXXXXXXKYQRKAGHRQPNTRLRITGIS 272 V K ++K GHRQ TR+ + I+ Sbjct: 62 VTVLSHPRGRKVTVYKMKPKKKTRKKQGHRQDLTRVLVESIT 103
>RL21_SHIFL (P0AG50) 50S ribosomal protein L21| Length = 103 Score = 48.1 bits (113), Expect = 2e-05 Identities = 28/103 (27%), Positives = 52/103 (50%) Frame = -3 Query: 580 IFAVVMIGSRQYIVMPGRYIYTQRLKDANVNDQIILNKVLLVSTRDKAYIGMPVVTNAAV 401 ++AV G +Q+ V G+ + ++L D + + +VL+++ ++ IG+P V + Sbjct: 1 MYAVFQSGGKQHRVSEGQTVRLEKL-DIATGETVEFAEVLMIANGEEVKIGVPFVDGGVI 59 Query: 400 HAIVEEQGLDDXXXXXXXXXXXKYQRKAGHRQPNTRLRITGIS 272 A V G + Y+++ GHRQ T ++ITGIS Sbjct: 60 KAEVVAHGRGEKVKIVKFRRRKHYRKQQGHRQWFTDVKITGIS 102
>RL21_ECOLI (P0AG48) 50S ribosomal protein L21| Length = 103 Score = 48.1 bits (113), Expect = 2e-05 Identities = 28/103 (27%), Positives = 52/103 (50%) Frame = -3 Query: 580 IFAVVMIGSRQYIVMPGRYIYTQRLKDANVNDQIILNKVLLVSTRDKAYIGMPVVTNAAV 401 ++AV G +Q+ V G+ + ++L D + + +VL+++ ++ IG+P V + Sbjct: 1 MYAVFQSGGKQHRVSEGQTVRLEKL-DIATGETVEFAEVLMIANGEEVKIGVPFVDGGVI 59 Query: 400 HAIVEEQGLDDXXXXXXXXXXXKYQRKAGHRQPNTRLRITGIS 272 A V G + Y+++ GHRQ T ++ITGIS Sbjct: 60 KAEVVAHGRGEKVKIVKFRRRKHYRKQQGHRQWFTDVKITGIS 102
>RL21_ECO57 (P0AG49) 50S ribosomal protein L21| Length = 103 Score = 48.1 bits (113), Expect = 2e-05 Identities = 28/103 (27%), Positives = 52/103 (50%) Frame = -3 Query: 580 IFAVVMIGSRQYIVMPGRYIYTQRLKDANVNDQIILNKVLLVSTRDKAYIGMPVVTNAAV 401 ++AV G +Q+ V G+ + ++L D + + +VL+++ ++ IG+P V + Sbjct: 1 MYAVFQSGGKQHRVSEGQTVRLEKL-DIATGETVEFAEVLMIANGEEVKIGVPFVDGGVI 59 Query: 400 HAIVEEQGLDDXXXXXXXXXXXKYQRKAGHRQPNTRLRITGIS 272 A V G + Y+++ GHRQ T ++ITGIS Sbjct: 60 KAEVVAHGRGEKVKIVKFRRRKHYRKQQGHRQWFTDVKITGIS 102
>RK21_CYACA (O19884) Chloroplast 50S ribosomal protein L21| Length = 108 Score = 48.1 bits (113), Expect = 2e-05 Identities = 30/106 (28%), Positives = 48/106 (45%) Frame = -3 Query: 577 FAVVMIGSRQYIVMPGRYIYTQRLKDANVNDQIILNKVLLVSTRDKAYIGMPVVTNAAVH 398 +A+V RQ PG+Y Y AN D+II KVLL+ + IG P V VH Sbjct: 4 YAIVKASGRQLWFEPGKY-YNINYVHANPGDKIIFYKVLLLKNTNSLLIGKPFVEKVEVH 62 Query: 397 AIVEEQGLDDXXXXXXXXXXXKYQRKAGHRQPNTRLRITGISGYEE 260 A + + D ++K G++ T+++I I +++ Sbjct: 63 ATILQHLKDKKITVFKMQAKKGTKKKKGYKTVLTKIKINCIHNHKK 108
>RL21_CHLMU (Q9PJX5) 50S ribosomal protein L21| Length = 107 Score = 45.8 bits (107), Expect = 1e-04 Identities = 30/99 (30%), Positives = 46/99 (46%), Gaps = 1/99 (1%) Frame = -3 Query: 577 FAVVMIGSRQYIVMPGRYIYTQRLKD-ANVNDQIILNKVLLVSTRDKAYIGMPVVTNAAV 401 +AVV G++QY V G I + L + N +++ +VL V +KA +G P V NA V Sbjct: 4 YAVVQTGNKQYQVRKGDVIDVELLDGISEENKEVLFQEVLFVFDGEKASVGSPTVGNAVV 63 Query: 400 HAIVEEQGLDDXXXXXXXXXXXKYQRKAGHRQPNTRLRI 284 + + Y +K GHRQ R++I Sbjct: 64 KGELISFVRGEKVVAYKYKKRKNYHKKIGHRQNYLRVKI 102
>RL21_BORBU (O51719) 50S ribosomal protein L21| Length = 103 Score = 45.1 bits (105), Expect = 2e-04 Identities = 24/92 (26%), Positives = 42/92 (45%) Frame = -3 Query: 580 IFAVVMIGSRQYIVMPGRYIYTQRLKDANVNDQIILNKVLLVSTRDKAYIGMPVVTNAAV 401 ++A+V I +QY + G ++ ++ D++ N VLL++ + IG P V N+ + Sbjct: 1 MYALVEINGKQYKAIEGEFLKIDKISPVE-KDKLEFNSVLLINKDGEVKIGKPYVVNSLI 59 Query: 400 HAIVEEQGLDDXXXXXXXXXXXKYQRKAGHRQ 305 +E D +RK GHRQ Sbjct: 60 RCTYKEDKKDKKVVSYRYRRRKSSERKVGHRQ 91
>RL21_HAEIN (P44359) 50S ribosomal protein L21| Length = 103 Score = 43.5 bits (101), Expect = 5e-04 Identities = 30/102 (29%), Positives = 49/102 (48%) Frame = -3 Query: 580 IFAVVMIGSRQYIVMPGRYIYTQRLKDANVNDQIILNKVLLVSTRDKAYIGMPVVTNAAV 401 ++AV G +Q+ V G+ + ++L+ A + + L+V + IG PVV A V Sbjct: 1 MYAVFQSGGKQHRVSEGQVVRLEKLELAT-GATVEFDSXLMVVNGEDVKIGAPVVAGAKV 59 Query: 400 HAIVEEQGLDDXXXXXXXXXXXKYQRKAGHRQPNTRLRITGI 275 A V QG + +++ GHRQ T ++ITGI Sbjct: 60 VAEVVAQGRGEKVKIVKFRRRKHSRKQQGHRQWFTEVKITGI 101
>RL21_BUCAI (P57467) 50S ribosomal protein L21| Length = 108 Score = 43.1 bits (100), Expect = 7e-04 Identities = 26/103 (25%), Positives = 51/103 (49%) Frame = -3 Query: 580 IFAVVMIGSRQYIVMPGRYIYTQRLKDANVNDQIILNKVLLVSTRDKAYIGMPVVTNAAV 401 ++AV + G +QY V+ + I ++L ++ + I +K+L++ +D IG P V + Sbjct: 1 MYAVFISGGKQYRVVKNQIIRLEKL-NSPLGTTIEFDKILMLFDKDSIKIGTPFVEGGTI 59 Query: 400 HAIVEEQGLDDXXXXXXXXXXXKYQRKAGHRQPNTRLRITGIS 272 A ++ G Y+++ GHRQ T ++I I+ Sbjct: 60 KAHIQNHGRLKKIKIIKFNRRKHYKKQQGHRQYFTDVKIIDIN 102
>RK21_ODOSI (P49557) Chloroplast 50S ribosomal protein L21| Length = 105 Score = 42.0 bits (97), Expect = 0.002 Identities = 29/101 (28%), Positives = 47/101 (46%) Frame = -3 Query: 577 FAVVMIGSRQYIVMPGRYIYTQRLKDANVNDQIILNKVLLVSTRDKAYIGMPVVTNAAVH 398 +A+V I RQ+ + G+Y R+ + +I LN+VLL++ + IG P + + V Sbjct: 3 YAIVEISGRQFWIETGKYYDFNRIP-TELGKEITLNRVLLLNNEGEILIGKPYLESVTVK 61 Query: 397 AIVEEQGLDDXXXXXXXXXXXKYQRKAGHRQPNTRLRITGI 275 + E K ++K GHRQ TR+ I I Sbjct: 62 GKILEHLRGRKTLVYKMRPKKKTRKKQGHRQELTRVLIEEI 102
>RK21_GUITH (O78429) Chloroplast 50S ribosomal protein L21| Length = 104 Score = 41.6 bits (96), Expect = 0.002 Identities = 29/101 (28%), Positives = 44/101 (43%) Frame = -3 Query: 577 FAVVMIGSRQYIVMPGRYIYTQRLKDANVNDQIILNKVLLVSTRDKAYIGMPVVTNAAVH 398 +A++ +Q+ V PGR+ Y + D+I L +VLL++ +G P + N V Sbjct: 3 YAIIEASGKQFWVEPGRF-YDFNSLNVEPGDKIALTRVLLINDNGNITVGKPCLDNVKVE 61 Query: 397 AIVEEQGLDDXXXXXXXXXXXKYQRKAGHRQPNTRLRITGI 275 A V K ++K GHR TRL I I Sbjct: 62 ATVLGHLRGQKVTVYKMQPKKKTRKKQGHRTNLTRLLIDNI 102
>RL21_RHOPA (Q6NDF0) 50S ribosomal protein L21 (RRP-L21)| Length = 125 Score = 41.2 bits (95), Expect = 0.003 Identities = 33/101 (32%), Positives = 46/101 (45%) Frame = -3 Query: 577 FAVVMIGSRQYIVMPGRYIYTQRLKDANVNDQIILNKVLLVSTRDKAYIGMPVVTNAAVH 398 FAV+ G RQY V+P + ++ D +V I L +VL++ D +G P V A V Sbjct: 1 FAVIKTGGRQYRVVPEDVLEVGKI-DGDVGSIIQLGEVLVLG-GDTPVLGAPTVAGATVA 58 Query: 397 AIVEEQGLDDXXXXXXXXXXXKYQRKAGHRQPNTRLRITGI 275 A V + +RK G+R T LRIT I Sbjct: 59 AEVLDHKRGPKVIAFKKRRRKHSKRKRGYRDEITVLRITEI 99
>RL21_TREPA (O83727) 50S ribosomal protein L21| Length = 105 Score = 40.8 bits (94), Expect = 0.004 Identities = 27/104 (25%), Positives = 42/104 (40%) Frame = -3 Query: 580 IFAVVMIGSRQYIVMPGRYIYTQRLKDANVNDQIILNKVLLVSTRDKAYIGMPVVTNAAV 401 ++A++ +QY V G I + + I + +VL++ IG P + V Sbjct: 1 MYALIEYKGKQYKVERGSSIVVDNISEVAPGGCIDVREVLMIGGEGLTRIGSPYLEGVGV 60 Query: 400 HAIVEEQGLDDXXXXXXXXXXXKYQRKAGHRQPNTRLRITGISG 269 A+V E Y R GHRQ TRL ++ I G Sbjct: 61 RAVVGECFRSRKITVYKYKSKKDYHRTIGHRQWYTRLTVSDILG 104
>RL21_STRGR (P95756) 50S ribosomal protein L21| Length = 106 Score = 40.4 bits (93), Expect = 0.005 Identities = 27/102 (26%), Positives = 46/102 (45%) Frame = -3 Query: 580 IFAVVMIGSRQYIVMPGRYIYTQRLKDANVNDQIILNKVLLVSTRDKAYIGMPVVTNAAV 401 ++A+V G RQ+ V G + ++ A V D + L+ +L+V D V+ V Sbjct: 1 MYAIVRSGGRQHKVAVGDIVEVDKISTAKVGDTVELSTLLVVDG-DAVTSDPWVLDGIKV 59 Query: 400 HAIVEEQGLDDXXXXXXXXXXXKYQRKAGHRQPNTRLRITGI 275 A + + Y+R+ GHRQ T +++TGI Sbjct: 60 TAEIVDHHKGAKIDILRYKNKTGYRRRQGHRQQYTAIKVTGI 101
>RK21_MARPO (P06387) Chloroplast 50S ribosomal protein L21| Length = 116 Score = 39.7 bits (91), Expect = 0.008 Identities = 26/106 (24%), Positives = 46/106 (43%), Gaps = 5/106 (4%) Frame = -3 Query: 577 FAVVMIGSRQYIVMPGRYIYTQRL-----KDANVNDQIILNKVLLVSTRDKAYIGMPVVT 413 +A++ G +Q V PGR+ + + N +I++ +VL++ +G P + Sbjct: 4 YAIIETGGQQLRVEPGRFYNIRHFVSLTPNELEQNTKILIYRVLMIRQESTIKMGHPWLK 63 Query: 412 NAAVHAIVEEQGLDDXXXXXXXXXXXKYQRKAGHRQPNTRLRITGI 275 A V + L+ K +RK GHRQ +TR + I Sbjct: 64 GAIVKGRILHSCLEKKITIYKMISKKKTRRKLGHRQKSTRFIVDSI 109
>RL21_DEIRA (Q9RY64) 50S ribosomal protein L21| Length = 100 Score = 37.7 bits (86), Expect = 0.030 Identities = 30/104 (28%), Positives = 44/104 (42%) Frame = -3 Query: 580 IFAVVMIGSRQYIVMPGRYIYTQRLKDANVNDQIILNKVLLVSTRDKAYIGMPVVTNAAV 401 +FA++ G +QY V G I + L+ D++ L K L V + V Sbjct: 1 MFAIIQTGGKQYRVSEGDVIRVESLQ-GEAGDKVEL-KALFVGGEQTVF--GEDAGKYTV 56 Query: 400 HAIVEEQGLDDXXXXXXXXXXXKYQRKAGHRQPNTRLRITGISG 269 A V E G +Y+R+ GHRQ T ++I GI G Sbjct: 57 QAEVVEHGRGKKIYIRKYKSGVQYRRRTGHRQNFTAIKILGIQG 100
>RK21_PORPU (P51209) Chloroplast 50S ribosomal protein L21| Length = 104 Score = 37.4 bits (85), Expect = 0.039 Identities = 29/101 (28%), Positives = 40/101 (39%) Frame = -3 Query: 577 FAVVMIGSRQYIVMPGRYIYTQRLKDANVNDQIILNKVLLVSTRDKAYIGMPVVTNAAVH 398 +A++ +Q + GRY Y IIL KVLL++ +G P + A + Sbjct: 3 YAIIEASGKQLWIEEGRY-YDLNHIPVEPGQSIILGKVLLLNKDGHVSLGHPCIEGAVIK 61 Query: 397 AIVEEQGLDDXXXXXXXXXXXKYQRKAGHRQPNTRLRITGI 275 A V K + K GHRQ TRL I I Sbjct: 62 ATVMRHLRGKKITVFKMKPKKKMRLKKGHRQELTRLMIDSI 102
>RK21_ADICA (Q85FH8) Chloroplast 50S ribosomal protein L21| Length = 127 Score = 36.2 bits (82), Expect = 0.087 Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 5/75 (6%) Frame = -3 Query: 577 FAVVMIGSRQYIVMPGRYIYTQRLKDANVNDQ-----IILNKVLLVSTRDKAYIGMPVVT 413 +A++ IG +Q V PGR+ Y R +N+N + + + +VLL+ K IG P + Sbjct: 13 YAIIDIGGKQLRVQPGRF-YDVRHFPSNLNTRGSDTKVSMGRVLLIRDGSKIDIGSPWLA 71 Query: 412 NAAVHAIVEEQGLDD 368 NA V + +D Sbjct: 72 NAVVKGRILHNCFED 86
>RL21_MYCLE (Q9CBZ2) 50S ribosomal protein L21| Length = 103 Score = 33.9 bits (76), Expect = 0.43 Identities = 31/107 (28%), Positives = 44/107 (41%), Gaps = 6/107 (5%) Frame = -3 Query: 577 FAVVMIGSRQYIVMPGRYIYTQRLKDANVNDQIILNKVLLVSTRDKAYIGMPVVTNA--- 407 +A+V G +QY V G + ++L D ++ L L+V G V TNA Sbjct: 4 YAIVKTGGKQYKVAVGDVVKIEKL-DFEPGAKVSLPVTLVVD-------GATVTTNAKAL 55 Query: 406 ---AVHAIVEEQGLDDXXXXXXXXXXXKYQRKAGHRQPNTRLRITGI 275 AV V E Y ++ GHRQ T L++TGI Sbjct: 56 AKVAVTGKVLEHTKGPKIRIHKFKNKTGYHKRQGHRQQLTVLKVTGI 102
>RL21_MYCTU (P66117) 50S ribosomal protein L21| Length = 104 Score = 32.3 bits (72), Expect = 1.3 Identities = 28/108 (25%), Positives = 46/108 (42%), Gaps = 6/108 (5%) Frame = -3 Query: 577 FAVVMIGSRQYIVMPGRYIYTQRLKDANVNDQIILNKVLLVSTRDKAYIGMPVVTNAAVH 398 +A+V G +QY V G + ++L ++ +++ L L+V G V T+A Sbjct: 5 YAIVKTGGKQYKVAVGDVVKVEKL-ESEQGEKVSLPVALVVD-------GATVTTDAKAL 56 Query: 397 AIVEEQG------LDDXXXXXXXXXXXKYQRKAGHRQPNTRLRITGIS 272 A V G Y ++ GHRQ T L++TGI+ Sbjct: 57 AKVAVTGEVLGHTKGPKIRIHKFKNKTGYHKRQGHRQQLTVLKVTGIA 104
>RL21_MYCBO (P66118) 50S ribosomal protein L21| Length = 104 Score = 32.3 bits (72), Expect = 1.3 Identities = 28/108 (25%), Positives = 46/108 (42%), Gaps = 6/108 (5%) Frame = -3 Query: 577 FAVVMIGSRQYIVMPGRYIYTQRLKDANVNDQIILNKVLLVSTRDKAYIGMPVVTNAAVH 398 +A+V G +QY V G + ++L ++ +++ L L+V G V T+A Sbjct: 5 YAIVKTGGKQYKVAVGDVVKVEKL-ESEQGEKVSLPVALVVD-------GATVTTDAKAL 56 Query: 397 AIVEEQG------LDDXXXXXXXXXXXKYQRKAGHRQPNTRLRITGIS 272 A V G Y ++ GHRQ T L++TGI+ Sbjct: 57 AKVAVTGEVLGHTKGPKIRIHKFKNKTGYHKRQGHRQQLTVLKVTGIA 104
>TNR6A_HUMAN (Q8NDV7) Trinucleotide repeat-containing gene 6A protein (CAG| repeat protein 26) (Glycin-tryptophan protein of 182 kDa) (GW182 autoantigen) (GW1 protein) (EMSY interactor protein) Length = 1962 Score = 32.0 bits (71), Expect = 1.6 Identities = 17/57 (29%), Positives = 24/57 (42%), Gaps = 7/57 (12%) Frame = +1 Query: 22 IKXNTIGI*KEHKXWWNKQK-------DGTNHSTNGSIFSTLTWGRVSFGEQWGKCS 171 +K N G KE K WN + DG S S+ ++ WG S WG+ + Sbjct: 814 VKSNQWGNCKEEKAAWNDSQKNKQGWGDGQKSSQGWSVSASDNWGETSRNNHWGEAN 870
>RL21_CHLVI (P94688) 50S ribosomal protein L21 (Fragment)| Length = 95 Score = 30.8 bits (68), Expect = 3.6 Identities = 23/100 (23%), Positives = 43/100 (43%) Frame = -3 Query: 574 AVVMIGSRQYIVMPGRYIYTQRLKDANVNDQIILNKVLLVSTRDKAYIGMPVVTNAAVHA 395 A++ I +Q++V G I+ + K A D I + ++ V D A ++ Sbjct: 3 ALIEISDKQFLVQEGDKIFVPKQK-AVAGDVIEVKSLMKVGQADSA------LSEGTAKV 55 Query: 394 IVEEQGLDDXXXXXXXXXXXKYQRKAGHRQPNTRLRITGI 275 V + D+ ++QR+ GHRQ T++ + I Sbjct: 56 KVLDHVRDETIIVFRKKRRKRFQRRNGHRQHMTQVEVMSI 95
>DHYS_SULSO (Q97ZF1) Probable deoxyhypusine synthase (EC 2.5.1.46) (DHS)| Length = 312 Score = 30.8 bits (68), Expect = 3.6 Identities = 11/20 (55%), Positives = 14/20 (70%) Frame = +1 Query: 40 GI*KEHKXWWNKQKDGTNHS 99 GI K H WWN+ KDG N++ Sbjct: 240 GISKHHTIWWNQFKDGLNYA 259
>FBLN1_BRARE (O42182) Fibulin-1 precursor| Length = 681 Score = 30.0 bits (66), Expect = 6.2 Identities = 21/71 (29%), Positives = 29/71 (40%), Gaps = 3/71 (4%) Frame = -2 Query: 572 RCHDWVQTIHCDARSVYIHAEAERRQCQ*SDHFEQGTTSVN*RQSLYWHASGDQCC---C 402 RCH+ + HC + A R CQ D GT S + +S + G +C C Sbjct: 472 RCHNTPGSFHCTCPASGYTLAANGRSCQDIDECLTGTHSCSESESCFNIQGGFRCLSFDC 531 Query: 401 SCNC*RTGTGR 369 N R+G R Sbjct: 532 PANYRRSGDTR 542 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 84,387,798 Number of Sequences: 219361 Number of extensions: 1622484 Number of successful extensions: 3518 Number of sequences better than 10.0: 48 Number of HSP's better than 10.0 without gapping: 3424 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3498 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6143359464 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
