ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd16j22 |
|---|---|
| Clone Library Name | barley_pub |
>RL19B_ARATH (Q9LUQ6) 60S ribosomal protein L19-2| Length = 209 Score = 167 bits (424), Expect = 2e-41 Identities = 87/140 (62%), Positives = 95/140 (67%) Frame = -2 Query: 639 KDGFIIRKPQKIXXXXXXXXXHEAKQKGRHSGYGKRRGTREARLPTKIXXXXXXXXXXXX 460 KDGFIIRKP KI +EAK+KGRHSGYGKR+GTREARLPTKI Sbjct: 46 KDGFIIRKPTKIHSRSRARALNEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRF 105 Query: 459 XRKYREAKKIDKHMYHDMYLKVKGNMFKNKRVLMESIHKSKAEKAREKTLSDQFXXXXXX 280 KYRE+KKID+HMYHDMY+KVKGN+FKNKRVLMESIHK KAEKAREKTL+DQF Sbjct: 106 LSKYRESKKIDRHMYHDMYMKVKGNVFKNKRVLMESIHKMKAEKAREKTLADQFEAKRIK 165 Query: 279 XXXXXXXXXXXXXXRLAQGP 220 RLAQGP Sbjct: 166 NKASRERKFARREERLAQGP 185
>RL19C_ARATH (P49693) 60S ribosomal protein L19-3| Length = 208 Score = 165 bits (417), Expect = 1e-40 Identities = 86/140 (61%), Positives = 95/140 (67%) Frame = -2 Query: 639 KDGFIIRKPQKIXXXXXXXXXHEAKQKGRHSGYGKRRGTREARLPTKIXXXXXXXXXXXX 460 KDGFIIRKP KI + AK+KGRHSGYGKR+GTREARLPTK+ Sbjct: 46 KDGFIIRKPTKIHSRSRARQLNIAKRKGRHSGYGKRKGTREARLPTKVLWMRRMRVLRRL 105 Query: 459 XRKYREAKKIDKHMYHDMYLKVKGNMFKNKRVLMESIHKSKAEKAREKTLSDQFXXXXXX 280 +KYRE KKID+HMYHDMY+KVKGN+FKNKRVLMESIHKSKAEKAREKTLSDQF Sbjct: 106 LKKYRETKKIDRHMYHDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAK 165 Query: 279 XXXXXXXXXXXXXXRLAQGP 220 RLA+GP Sbjct: 166 NKASRERKHARREERLAKGP 185
>RL19A_ARATH (Q9SRX2) 60S ribosomal protein L19-1| Length = 214 Score = 164 bits (416), Expect = 2e-40 Identities = 86/140 (61%), Positives = 93/140 (66%) Frame = -2 Query: 639 KDGFIIRKPQKIXXXXXXXXXHEAKQKGRHSGYGKRRGTREARLPTKIXXXXXXXXXXXX 460 KDGFIIRKP KI AK KGRHSGYGKR+GTREARLPTK+ Sbjct: 46 KDGFIIRKPTKIHSRSRARKMKIAKMKGRHSGYGKRKGTREARLPTKVLWMRRMRVLRRL 105 Query: 459 XRKYREAKKIDKHMYHDMYLKVKGNMFKNKRVLMESIHKSKAEKAREKTLSDQFXXXXXX 280 +KYRE KKIDKHMYHDMY++VKGN+FKNKRVLMESIHKSKAEKAREKTLSDQF Sbjct: 106 LKKYRETKKIDKHMYHDMYMRVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAK 165 Query: 279 XXXXXXXXXXXXXXRLAQGP 220 RLA+GP Sbjct: 166 NKASRERKHARREERLAKGP 185
>RL19_DROME (P36241) 60S ribosomal protein L19| Length = 203 Score = 130 bits (326), Expect = 4e-30 Identities = 61/113 (53%), Positives = 78/113 (69%) Frame = -2 Query: 639 KDGFIIRKPQKIXXXXXXXXXHEAKQKGRHSGYGKRRGTREARLPTKIXXXXXXXXXXXX 460 KDG II+KP + EA++KGRH G+GKR+GT AR+PTK+ Sbjct: 46 KDGLIIKKPVVVHSRYRVRKNTEARRKGRHCGFGKRKGTANARMPTKLLWMQRQRVLRRL 105 Query: 459 XRKYREAKKIDKHMYHDMYLKVKGNMFKNKRVLMESIHKSKAEKAREKTLSDQ 301 +KYR++KKID+H+YHD+Y+K KGN+FKNKRVLME IHK KAEK R K L+DQ Sbjct: 106 LKKYRDSKKIDRHLYHDLYMKCKGNVFKNKRVLMEYIHKKKAEKQRSKMLADQ 158
>RL19_RAT (P84100) 60S ribosomal protein L19| Length = 196 Score = 127 bits (319), Expect = 3e-29 Identities = 62/113 (54%), Positives = 77/113 (68%) Frame = -2 Query: 639 KDGFIIRKPQKIXXXXXXXXXHEAKQKGRHSGYGKRRGTREARLPTKIXXXXXXXXXXXX 460 KDG IIRKP + A++KGRH G GKR+GT AR+P K+ Sbjct: 46 KDGLIIRKPVTVHSRARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRL 105 Query: 459 XRKYREAKKIDKHMYHDMYLKVKGNMFKNKRVLMESIHKSKAEKAREKTLSDQ 301 R+YRE+KKID+HMYH +YLKVKGN+FKNKR+LME IHK KA+KAR+K L+DQ Sbjct: 106 LRRYRESKKIDRHMYHSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQ 158
>RL19_PONPY (Q5RB99) 60S ribosomal protein L19| Length = 196 Score = 127 bits (319), Expect = 3e-29 Identities = 62/113 (54%), Positives = 77/113 (68%) Frame = -2 Query: 639 KDGFIIRKPQKIXXXXXXXXXHEAKQKGRHSGYGKRRGTREARLPTKIXXXXXXXXXXXX 460 KDG IIRKP + A++KGRH G GKR+GT AR+P K+ Sbjct: 46 KDGLIIRKPVTVHSRARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRL 105 Query: 459 XRKYREAKKIDKHMYHDMYLKVKGNMFKNKRVLMESIHKSKAEKAREKTLSDQ 301 R+YRE+KKID+HMYH +YLKVKGN+FKNKR+LME IHK KA+KAR+K L+DQ Sbjct: 106 LRRYRESKKIDRHMYHSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQ 158
>RL19_MOUSE (P84099) 60S ribosomal protein L19| Length = 196 Score = 127 bits (319), Expect = 3e-29 Identities = 62/113 (54%), Positives = 77/113 (68%) Frame = -2 Query: 639 KDGFIIRKPQKIXXXXXXXXXHEAKQKGRHSGYGKRRGTREARLPTKIXXXXXXXXXXXX 460 KDG IIRKP + A++KGRH G GKR+GT AR+P K+ Sbjct: 46 KDGLIIRKPVTVHSRARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRL 105 Query: 459 XRKYREAKKIDKHMYHDMYLKVKGNMFKNKRVLMESIHKSKAEKAREKTLSDQ 301 R+YRE+KKID+HMYH +YLKVKGN+FKNKR+LME IHK KA+KAR+K L+DQ Sbjct: 106 LRRYRESKKIDRHMYHSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQ 158
>RL19_MACFA (Q8HXN9) 60S ribosomal protein L19| Length = 196 Score = 127 bits (319), Expect = 3e-29 Identities = 62/113 (54%), Positives = 77/113 (68%) Frame = -2 Query: 639 KDGFIIRKPQKIXXXXXXXXXHEAKQKGRHSGYGKRRGTREARLPTKIXXXXXXXXXXXX 460 KDG IIRKP + A++KGRH G GKR+GT AR+P K+ Sbjct: 46 KDGLIIRKPVTVHSRARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRL 105 Query: 459 XRKYREAKKIDKHMYHDMYLKVKGNMFKNKRVLMESIHKSKAEKAREKTLSDQ 301 R+YRE+KKID+HMYH +YLKVKGN+FKNKR+LME IHK KA+KAR+K L+DQ Sbjct: 106 LRRYRESKKIDRHMYHSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQ 158
>RL19_HUMAN (P84098) 60S ribosomal protein L19| Length = 196 Score = 127 bits (319), Expect = 3e-29 Identities = 62/113 (54%), Positives = 77/113 (68%) Frame = -2 Query: 639 KDGFIIRKPQKIXXXXXXXXXHEAKQKGRHSGYGKRRGTREARLPTKIXXXXXXXXXXXX 460 KDG IIRKP + A++KGRH G GKR+GT AR+P K+ Sbjct: 46 KDGLIIRKPVTVHSRARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRL 105 Query: 459 XRKYREAKKIDKHMYHDMYLKVKGNMFKNKRVLMESIHKSKAEKAREKTLSDQ 301 R+YRE+KKID+HMYH +YLKVKGN+FKNKR+LME IHK KA+KAR+K L+DQ Sbjct: 106 LRRYRESKKIDRHMYHSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQ 158
>RL19_BOVIN (Q3T0W9) 60S ribosomal protein L19| Length = 196 Score = 127 bits (319), Expect = 3e-29 Identities = 62/113 (54%), Positives = 77/113 (68%) Frame = -2 Query: 639 KDGFIIRKPQKIXXXXXXXXXHEAKQKGRHSGYGKRRGTREARLPTKIXXXXXXXXXXXX 460 KDG IIRKP + A++KGRH G GKR+GT AR+P K+ Sbjct: 46 KDGLIIRKPVTVHSRARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRL 105 Query: 459 XRKYREAKKIDKHMYHDMYLKVKGNMFKNKRVLMESIHKSKAEKAREKTLSDQ 301 R+YRE+KKID+HMYH +YLKVKGN+FKNKR+LME IHK KA+KAR+K L+DQ Sbjct: 106 LRRYRESKKIDRHMYHSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQ 158
>RL19_XENLA (Q7ZYS1) 60S ribosomal protein L19| Length = 197 Score = 127 bits (318), Expect = 4e-29 Identities = 62/113 (54%), Positives = 77/113 (68%) Frame = -2 Query: 639 KDGFIIRKPQKIXXXXXXXXXHEAKQKGRHSGYGKRRGTREARLPTKIXXXXXXXXXXXX 460 KDG IIRKP + A++KGRH G GKR+GT AR+P K+ Sbjct: 46 KDGLIIRKPVTVHSRARCRKNTLARRKGRHMGIGKRKGTANARMPEKLSWMRRMRILRRL 105 Query: 459 XRKYREAKKIDKHMYHDMYLKVKGNMFKNKRVLMESIHKSKAEKAREKTLSDQ 301 R+YRE+KKID+HMYH +YLKVKGN+FKNKR+LME IHK KA+KAR+K L+DQ Sbjct: 106 LRRYRESKKIDRHMYHSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQ 158
>RL19_BRARE (Q6P5L3) 60S ribosomal protein L19| Length = 196 Score = 123 bits (309), Expect = 4e-28 Identities = 60/113 (53%), Positives = 76/113 (67%) Frame = -2 Query: 639 KDGFIIRKPQKIXXXXXXXXXHEAKQKGRHSGYGKRRGTREARLPTKIXXXXXXXXXXXX 460 KDG II+KP + A++KGRH G GKR+GT AR+P K+ Sbjct: 46 KDGLIIKKPVTVHSRARCRKNTLARRKGRHMGVGKRKGTANARMPEKLCWMRRMRILRRL 105 Query: 459 XRKYREAKKIDKHMYHDMYLKVKGNMFKNKRVLMESIHKSKAEKAREKTLSDQ 301 R+YREAKKID+HMYH +YL+ KGN+FKNKR+LME IHK KA+KAR+K L+DQ Sbjct: 106 LRRYREAKKIDRHMYHSLYLRAKGNVFKNKRILMEHIHKLKADKARKKLLADQ 158
>RL19_ICTPU (Q90YU8) 60S ribosomal protein L19| Length = 196 Score = 122 bits (306), Expect = 9e-28 Identities = 59/113 (52%), Positives = 76/113 (67%) Frame = -2 Query: 639 KDGFIIRKPQKIXXXXXXXXXHEAKQKGRHSGYGKRRGTREARLPTKIXXXXXXXXXXXX 460 KDG II+KP + A++KGRH G GKR+GT AR+P K+ Sbjct: 46 KDGLIIKKPVTVHSRARCRKNTLARRKGRHMGIGKRKGTANARMPEKLCWMRRMRILRRL 105 Query: 459 XRKYREAKKIDKHMYHDMYLKVKGNMFKNKRVLMESIHKSKAEKAREKTLSDQ 301 R+YRE+KKID+HMYH +YL+ KGN+FKNKR+LME IHK KA++AR+K LSDQ Sbjct: 106 LRRYRESKKIDRHMYHSLYLRAKGNVFKNKRILMEHIHKLKADRARKKLLSDQ 158
>RL19_DICDI (P14329) 60S ribosomal protein L19 (Vegetative-specific protein| V14) (22 kDa calmodulin-binding protein) Length = 186 Score = 115 bits (289), Expect = 8e-26 Identities = 60/111 (54%), Positives = 71/111 (63%) Frame = -2 Query: 633 GFIIRKPQKIXXXXXXXXXHEAKQKGRHSGYGKRRGTREARLPTKIXXXXXXXXXXXXXR 454 GFI+RKP + + AK+ GRH G G R GTREARLP+KI + Sbjct: 48 GFIMRKPVVVHSRSRAREHNAAKRLGRHRGAGNRLGTREARLPSKILWIRRIRVLRRLLK 107 Query: 453 KYREAKKIDKHMYHDMYLKVKGNMFKNKRVLMESIHKSKAEKAREKTLSDQ 301 KYREAKKIDKH Y ++YLK KGN+FKNKR L+E I KSK EK REK + DQ Sbjct: 108 KYREAKKIDKHSYRELYLKAKGNVFKNKRTLIEYIVKSKTEKLREKLIQDQ 158
>RL19_CAEEL (O02639) 60S ribosomal protein L19| Length = 198 Score = 114 bits (286), Expect = 2e-25 Identities = 56/112 (50%), Positives = 71/112 (63%) Frame = -2 Query: 636 DGFIIRKPQKIXXXXXXXXXHEAKQKGRHSGYGKRRGTREARLPTKIXXXXXXXXXXXXX 457 DG IIRKP + EA++KGRH+GYGKRRGT AR+P K Sbjct: 47 DGLIIRKPVTVHSRFRAREYEEARRKGRHTGYGKRRGTANARMPEKTLWIRRMRVLRNLL 106 Query: 456 RKYREAKKIDKHMYHDMYLKVKGNMFKNKRVLMESIHKSKAEKAREKTLSDQ 301 R+YR+AKK+DKH+YH++YL+ KGN FKNK+ L+E I K K E R K L+DQ Sbjct: 107 RRYRDAKKLDKHLYHELYLRAKGNNFKNKKNLIEYIFKKKTENKRAKQLADQ 158
>RL19_SCHPO (P05734) 60S ribosomal protein L19 (YL15)| Length = 192 Score = 109 bits (272), Expect = 8e-24 Identities = 54/113 (47%), Positives = 72/113 (63%) Frame = -2 Query: 639 KDGFIIRKPQKIXXXXXXXXXHEAKQKGRHSGYGKRRGTREARLPTKIXXXXXXXXXXXX 460 KDG +IRKP + H AK+ GRH+GYGKR+GT EAR+P+ + Sbjct: 45 KDGLVIRKPNLMHSRFRIRKTHAAKRLGRHTGYGKRKGTAEARMPSAVVWMRRQRVLRRL 104 Query: 459 XRKYREAKKIDKHMYHDMYLKVKGNMFKNKRVLMESIHKSKAEKAREKTLSDQ 301 RKYRE+ KIDKH+YH +YL+ KGN FK+KR L+E I ++KAE R K + +Q Sbjct: 105 LRKYRESGKIDKHLYHTLYLEAKGNTFKHKRALIEHIQRAKAEANRTKLIQEQ 157
>RL19_YEAST (P05735) 60S ribosomal protein L19 (L23) (YL14) (RP33) (RP15L)| Length = 188 Score = 107 bits (266), Expect = 4e-23 Identities = 50/113 (44%), Positives = 74/113 (65%) Frame = -2 Query: 639 KDGFIIRKPQKIXXXXXXXXXHEAKQKGRHSGYGKRRGTREARLPTKIXXXXXXXXXXXX 460 K+G I++K + ++K++GRHSGYGKR+GTREARLP+++ Sbjct: 45 KNGTIVKKAVTVHSKSRTRAHAQSKREGRHSGYGKRKGTREARLPSQVVWIRRLRVLRRL 104 Query: 459 XRKYREAKKIDKHMYHDMYLKVKGNMFKNKRVLMESIHKSKAEKAREKTLSDQ 301 KYR+A KIDKH+YH +Y + KGN FK+KR L+E I ++KA+ REK L+++ Sbjct: 105 LAKYRDAGKIDKHLYHVLYKESKGNAFKHKRALVEHIIQAKADAQREKALNEE 157
>RL19_PYRAB (Q9V1V3) 50S ribosomal protein L19e| Length = 151 Score = 62.4 bits (150), Expect = 1e-09 Identities = 37/106 (34%), Positives = 51/106 (48%) Frame = -2 Query: 639 KDGFIIRKPQKIXXXXXXXXXHEAKQKGRHSGYGKRRGTREARLPTKIXXXXXXXXXXXX 460 K+G I +KP K HE K+KGRH G G R+G + AR+ K Sbjct: 46 KEGVIKKKPVKGQSRYRARIRHEQKKKGRHRGPGSRKGKKTARMGKKELWIKTIRALRKE 105 Query: 459 XRKYREAKKIDKHMYHDMYLKVKGNMFKNKRVLMESIHKSKAEKAR 322 RK +E KKID+ Y +Y++ KG FK+K L + + K R Sbjct: 106 LRKLKEQKKIDRRTYRMLYIRAKGGQFKSKHQLYMFLEEHNLLKKR 151
>RL19_PYRHO (O59437) 50S ribosomal protein L19e| Length = 150 Score = 61.2 bits (147), Expect = 2e-09 Identities = 35/93 (37%), Positives = 47/93 (50%) Frame = -2 Query: 639 KDGFIIRKPQKIXXXXXXXXXHEAKQKGRHSGYGKRRGTREARLPTKIXXXXXXXXXXXX 460 K+G I +KP + HE K+KGRH G G R+G + AR+ K Sbjct: 46 KEGVIRKKPIEGQSRYRARIRHEQKKKGRHRGPGSRKGKKTARMGKKELWIKTIRALRRE 105 Query: 459 XRKYREAKKIDKHMYHDMYLKVKGNMFKNKRVL 361 RK +E KKID+ Y +Y++ KG FKNK L Sbjct: 106 LRKLKEQKKIDRKTYRMLYIRAKGGQFKNKHQL 138
>RL19_PYRFU (Q8U016) 50S ribosomal protein L19e (PfeL19)| Length = 150 Score = 60.5 bits (145), Expect = 4e-09 Identities = 35/93 (37%), Positives = 46/93 (49%) Frame = -2 Query: 639 KDGFIIRKPQKIXXXXXXXXXHEAKQKGRHSGYGKRRGTREARLPTKIXXXXXXXXXXXX 460 K+G I +KP K HE K+KGRH G G R+G + AR+ K Sbjct: 46 KEGVIKKKPIKGQSRYRAKIRHEQKKKGRHRGPGSRKGKKTARMGKKELWIKTIRALRKE 105 Query: 459 XRKYREAKKIDKHMYHDMYLKVKGNMFKNKRVL 361 RK + KKID+ Y +Y++ KG FKNK L Sbjct: 106 LRKLKAQKKIDRKTYRMLYIRAKGGQFKNKHQL 138
>RL19_METVA (P14024) 50S ribosomal protein L19e (ORF E)| Length = 149 Score = 52.4 bits (124), Expect = 1e-06 Identities = 27/89 (30%), Positives = 42/89 (47%) Frame = -2 Query: 636 DGFIIRKPQKIXXXXXXXXXHEAKQKGRHSGYGKRRGTREARLPTKIXXXXXXXXXXXXX 457 DG I++K +K E K+KG+ G G RRG + AR P K Sbjct: 46 DGIIVKKQEKGISSARKKEVQEQKRKGKRKGPGSRRGAKGARTPKKEKWMNTIRPLRTLL 105 Query: 456 RKYREAKKIDKHMYHDMYLKVKGNMFKNK 370 ++ RE +KI++ Y +Y KG F+++ Sbjct: 106 KELRENEKIERSSYRKLYRMAKGGAFRSR 134
>RL19_METJA (P54043) 50S ribosomal protein L19e| Length = 151 Score = 50.4 bits (119), Expect = 4e-06 Identities = 27/90 (30%), Positives = 42/90 (46%) Frame = -2 Query: 639 KDGFIIRKPQKIXXXXXXXXXHEAKQKGRHSGYGKRRGTREARLPTKIXXXXXXXXXXXX 460 K+G I +K +K E ++KGR G G RRG AR P K Sbjct: 48 KEGVIKKKQKKGISSARVKKLKEQRKKGRRRGPGSRRGAAGARTPPKERWMATIRALRKT 107 Query: 459 XRKYREAKKIDKHMYHDMYLKVKGNMFKNK 370 ++ R++ KID+ +Y +Y KG F+++ Sbjct: 108 LKQLRDSGKIDRKVYRKLYRMAKGGAFRSR 137
>RL19_METTH (O26129) 50S ribosomal protein L19e| Length = 148 Score = 49.7 bits (117), Expect = 7e-06 Identities = 28/90 (31%), Positives = 41/90 (45%) Frame = -2 Query: 639 KDGFIIRKPQKIXXXXXXXXXHEAKQKGRHSGYGKRRGTREARLPTKIXXXXXXXXXXXX 460 KDG I KP+K + K+KGR G G +G + AR P K Sbjct: 45 KDGAIKAKPKKGISSYRSKKIAQQKKKGRRRGPGSIKGAKGARRPKKDEWMTTIRALRKD 104 Query: 459 XRKYREAKKIDKHMYHDMYLKVKGNMFKNK 370 ++ R+ ++I+K Y +Y KG FK+K Sbjct: 105 LKEMRDNREINKSTYRKLYKMAKGGAFKSK 134
>RL19_ARCFU (O28372) 50S ribosomal protein L19e| Length = 149 Score = 43.1 bits (100), Expect = 7e-04 Identities = 25/89 (28%), Positives = 38/89 (42%) Frame = -2 Query: 639 KDGFIIRKPQKIXXXXXXXXXHEAKQKGRHSGYGKRRGTREARLPTKIXXXXXXXXXXXX 460 + G I RKP K+KGR G+G R+G + AR+P K Sbjct: 48 EQGVIKRKPVNGVSRARINKRKLQKRKGRRRGHGSRKGAKGARMPRKRMWILRIRALRKA 107 Query: 459 XRKYREAKKIDKHMYHDMYLKVKGNMFKN 373 R+ + +D+ Y +Y K KG F++ Sbjct: 108 LRQMKAEGVVDRRTYRILYRKAKGGEFRS 136
>RL19_SULAC (O05639) 50S ribosomal protein L19e| Length = 150 Score = 40.0 bits (92), Expect = 0.006 Identities = 27/85 (31%), Positives = 38/85 (44%), Gaps = 8/85 (9%) Frame = -2 Query: 573 EAKQKGRHSGYGKRRGTREARLPTKIXXXXXXXXXXXXXRKY----REAKKIDKHMYHDM 406 E K K R G G++ G+R+ + + R+Y R+ IDKH Y + Sbjct: 65 ERKHKRRSKGEGRKHGSRKGKSGARTGDKEIWINKIRKIRRYIRWLRDNNVIDKHTYRLL 124 Query: 405 YLKVKGNMFKN----KRVLMESIHK 343 Y + KGN FKN K L + HK Sbjct: 125 YKRAKGNYFKNLSDVKSYLRQMGHK 149
>RL19_AERPE (Q9YF93) 50S ribosomal protein L19e| Length = 155 Score = 38.5 bits (88), Expect = 0.017 Identities = 26/89 (29%), Positives = 38/89 (42%) Frame = -2 Query: 639 KDGFIIRKPQKIXXXXXXXXXHEAKQKGRHSGYGKRRGTREARLPTKIXXXXXXXXXXXX 460 K G I P+K H ++KGR G G+R+G ARL K Sbjct: 47 KRGVIKVLPEKGNAGHASKVRHLQRRKGRRRGMGRRKGVATARLDPKERWMHRIRKIRRY 106 Query: 459 XRKYREAKKIDKHMYHDMYLKVKGNMFKN 373 R R+ + ID+ Y +Y+ KG F++ Sbjct: 107 LRYLRDKQVIDRKTYRRLYMLAKGGTFRD 135
>RL19_SULSO (Q9UX89) 50S ribosomal protein L19e| Length = 151 Score = 37.0 bits (84), Expect = 0.050 Identities = 21/64 (32%), Positives = 32/64 (50%) Frame = -2 Query: 567 KQKGRHSGYGKRRGTREARLPTKIXXXXXXXXXXXXXRKYREAKKIDKHMYHDMYLKVKG 388 K +G+ SG R+G + AR +K + R+ K ID+H Y ++YLK KG Sbjct: 73 KSEGKKSG--SRKGKKGARANSKQMWVKRVRKIRAYLKWLRDHKVIDRHTYRELYLKTKG 130 Query: 387 NMFK 376 +K Sbjct: 131 GNYK 134
>NU1M_RAT (P03889) NADH-ubiquinone oxidoreductase chain 1 (EC 1.6.5.3) (NADH| dehydrogenase subunit 1) Length = 318 Score = 31.2 bits (69), Expect = 2.7 Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 9/50 (18%) Frame = +2 Query: 320 SLAFSALDLWILS---------MRTLLFLNMLPLTFRYMSWYMCLSIFFA 442 +L S LWI + + LL+ N LPLT + WY+ L IF A Sbjct: 263 TLLLSTTFLWIRASYPRFRYDQLMHLLWKNFLPLTLAFCMWYISLPIFLA 312
>NU1M_HYLLA (Q96126) NADH-ubiquinone oxidoreductase chain 1 (EC 1.6.5.3) (NADH| dehydrogenase subunit 1) Length = 318 Score = 31.2 bits (69), Expect = 2.7 Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 9/51 (17%) Frame = +2 Query: 320 SLAFSALDLWILS---------MRTLLFLNMLPLTFRYMSWYMCLSIFFAS 445 +L ++L LWI + + LL+ N LPLT + WY+ LS AS Sbjct: 263 TLLLTSLFLWIRTTYPRFRYDQLMYLLWKNFLPLTLTLLMWYISLSTMIAS 313
>POLS_RUBVT (P07566) Structural polyprotein [Contains: Nucleocapsid protein C;| Membrane glycoprotein E2; Membrane glycoprotein E1] Length = 1063 Score = 30.0 bits (66), Expect = 6.1 Identities = 14/22 (63%), Positives = 15/22 (68%) Frame = -3 Query: 284 PRARQAGRGRLPGGRRDWPRAP 219 PR R+ RGR G RRDW RAP Sbjct: 59 PRRRRGNRGR--GQRRDWSRAP 78
>RR3_MESVI (Q9MUU2) Chloroplast 30S ribosomal protein S3| Length = 213 Score = 29.6 bits (65), Expect = 7.9 Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 11/47 (23%) Frame = -3 Query: 332 RRQERRPYLTSLRPSVPRARQAG--------RGRLPG---GRRDWPR 225 R QER+P+ ++R +V RA++AG GRL G R +W R Sbjct: 125 RLQERKPFRRAIRQAVQRAKRAGVQGIKIQVAGRLNGAEIARSEWVR 171 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 68,990,333 Number of Sequences: 219361 Number of extensions: 1080204 Number of successful extensions: 3291 Number of sequences better than 10.0: 31 Number of HSP's better than 10.0 without gapping: 3155 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3283 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5995743495 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
