ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd16j19
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PCY2_RAT (O88637) Ethanolamine-phosphate cytidylyltransferase (E... 28 7.0
2PCY2_MOUSE (Q922E4) Ethanolamine-phosphate cytidylyltransferase ... 28 7.0

>PCY2_RAT (O88637) Ethanolamine-phosphate cytidylyltransferase (EC 2.7.7.14)|
           (Phosphorylethanolamine transferase)
           (CTP:phosphoethanolamine cytidylyltransferase)
          Length = 404

 Score = 28.1 bits (61), Expect = 7.0
 Identities = 13/31 (41%), Positives = 15/31 (48%)
 Frame = -2

Query: 111 ASGNAPXPGRVXTGTCGXVERFFHGYVSFLQ 19
           ASG  P PG       G  + F  G+V FLQ
Sbjct: 222 ASGKEPQPGETVIYVAGAFDLFHIGHVDFLQ 252



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>PCY2_MOUSE (Q922E4) Ethanolamine-phosphate cytidylyltransferase (EC 2.7.7.14)|
           (Phosphorylethanolamine transferase)
           (CTP:phosphoethanolamine cytidylyltransferase)
          Length = 404

 Score = 28.1 bits (61), Expect = 7.0
 Identities = 13/31 (41%), Positives = 15/31 (48%)
 Frame = -2

Query: 111 ASGNAPXPGRVXTGTCGXVERFFHGYVSFLQ 19
           ASG  P PG       G  + F  G+V FLQ
Sbjct: 222 ASGKEPQPGETVIYVAGAFDLFHIGHVDFLQ 252


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,008,208
Number of Sequences: 219361
Number of extensions: 178363
Number of successful extensions: 358
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 355
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 358
length of database: 80,573,946
effective HSP length: 21
effective length of database: 75,967,365
effective search space used: 1823216760
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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