>SEC9_YARLI (Q6C5G0) Protein transport protein SEC9|
          Length = 608

 Score = 33.9 bits (76), Expect = 0.27
 Identities = 22/53 (41%), Positives = 24/53 (45%), Gaps = 7/53 (13%)
 Frame = -1

Query: 382 ARPGAVNGIPQAPQVEQP-------AYAAGGASSEPSGTESHRSTGADNDGGS 245
           A P A    P A Q +QP       A AAGGAS  P G     S G   +GGS
Sbjct: 56  AAPPAARSNPYAVQNQQPSGGNPYAAAAAGGASGSPYGGSDPYSNGGGGNGGS 108

>ENAH_HUMAN (Q8N8S7) Protein enabled homolog|
          Length = 591

 Score = 33.1 bits (74), Expect = 0.46
 Identities = 25/92 (27%), Positives = 38/92 (41%), Gaps = 4/92 (4%)
 Frame = -1

Query: 493 SQVPMFPPRTPLTPXXXXXXXXXXXXXXXLPFAGQMVARPGAVNGIPQAPQVEQPAYAAG 314
           +QVP  PP  P  P                P  G   A  GA   + +  ++E  ++ +G
Sbjct: 358 NQVPPPPPPPPAPPLPASGFFLASMSEDNRPLTGLAAAIAGA--KLRKVSRMEDTSFPSG 415

Query: 313 ----GASSEPSGTESHRSTGADNDGGSGLADQ 230
               G +S  S T++ R  G    GGSGL ++
Sbjct: 416 GNAIGVNSASSKTDTGRGNGPLPLGGSGLMEE 447

>ZIMP7_MOUSE (Q8CIE2) PIAS-like protein Zimp7|
          Length = 920

 Score = 33.1 bits (74), Expect = 0.46
 Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
 Frame = -2

Query: 375 PGLSMAFPRPLKLNNQPMQQ--VGPVPSLLAPRATGALAPITMVGAAWLTSP 226
           PG  +  P P   + QP+ Q   GP+  L    A+G + P +M GA   + P
Sbjct: 831 PGTQLHHPNPSPASRQPLGQPNTGPISELAFNPASGMMGPPSMTGAGEASEP 882

>ENAH_MOUSE (Q03173) Protein enabled homolog (NPC-derived proline-rich protein|
           1) (NDPP-1)
          Length = 802

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 24/92 (26%), Positives = 33/92 (35%), Gaps = 4/92 (4%)
 Frame = -1

Query: 493 SQVPMFPPRTPLTPXXXXXXXXXXXXXXXLPFAGQMVARPGAVNGIPQAPQVEQPAYAAG 314
           +Q P  PP  P  P                P  G   A  GA   + +  +VE  ++  G
Sbjct: 590 NQAPPPPPPPPAPPLPASGIFSGSTSEDNRPLTGLAAAIAGA--KLRKVSRVEDGSFPGG 647

Query: 313 GASSEPSGTESHRSTGADND----GGSGLADQ 230
           G +   S   S    G  N     GGSGL ++
Sbjct: 648 GNTGSVSLASSKADAGRGNGPLPLGGSGLMEE 679

>RLA3_TRYCR (P26795) 60S acidic ribosomal protein P2-B (P2B)|
          Length = 112

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 17/46 (36%), Positives = 22/46 (47%)
 Frame = -1

Query: 370 AVNGIPQAPQVEQPAYAAGGASSEPSGTESHRSTGADNDGGSGLAD 233
           AV+  P A     PA AAGGA++  +          D+D G GL D
Sbjct: 67  AVSAAPAAGDAAAPAAAAGGAAAPAAADAKKEEEEEDDDMGFGLFD 112

>Y936_PSEPK (Q88PB4) Maf-like protein PP0936|
          Length = 203

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 18/48 (37%), Positives = 23/48 (47%)
 Frame = +2

Query: 161 SVCPGASIHAFCDLKRKLVAFLGLVSQAAPTIVIGASAPVALGARRLG 304
           S  P  S  A+ +   +  A  GLVS   P +V+GA   V L  R LG
Sbjct: 34  SPLPSESAPAYVERLARAKAAAGLVSVDGPAVVLGADTAVVLDGRILG 81

>UN112_DROME (Q9VZI3) Unc-112-related protein (Fermitin-1)|
          Length = 708

 Score = 30.8 bits (68), Expect = 2.3
 Identities = 17/42 (40%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
 Frame = -1

Query: 355 PQAPQVEQPAYAAGGASSEPSGTESHRSTG-ADNDGGSGLAD 233
           P +P   + A A G   S P+GT  H STG A  D  S   D
Sbjct: 197 PASPYTRRAATAPGTPISSPTGTWKHNSTGYASYDSNSSFGD 238

>POL1_GCMV (P13025) RNA1 polyprotein (P1) [Contains: P1A protein (1A) (Protease|
            cofactor); Putative ATP-dependent helicase (EC 3.6.1.-)
            (NTP-binding protein) (NTB) (1B) (Membrane-binding
            protein); Viral genome-linked protein (1C-VPg); Picornain
            3C-like pr
          Length = 2252

 Score = 30.0 bits (66), Expect = 3.9
 Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
 Frame = +1

Query: 181  YTCILRPKTQA-RSFLRTGQPSRSHHRYRRQCSCGSRCQKARNWPHLLHRL 330
            Y  +LR KT A  +FL+       H+R+R  C  G+    +R W HLL+RL
Sbjct: 1649 YNLLLRVKTCAFTAFLQ-------HNRHRLPCQVGTN-PYSREWGHLLNRL 1691

>CN032_PONPY (Q5R623) Protein C14orf32 homolog|
          Length = 245

 Score = 30.0 bits (66), Expect = 3.9
 Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
 Frame = -2

Query: 375 PGLSMAFPRPLKLNNQPMQQVGPVPSLLAPRATGALAPI---TMVGAAW 238
           PG+   +P P    N P    GP P+   P+A GA  P+   T+   AW
Sbjct: 155 PGMGGQYPTP----NMPYPSPGPYPAPPPPQAPGAAPPVPWGTVPPGAW 199

>CN032_MACFA (Q4R837) Protein C14orf32 homolog|
          Length = 245

 Score = 30.0 bits (66), Expect = 3.9
 Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
 Frame = -2

Query: 375 PGLSMAFPRPLKLNNQPMQQVGPVPSLLAPRATGALAPI---TMVGAAW 238
           PG+   +P P    N P    GP P+   P+A GA  P+   T+   AW
Sbjct: 155 PGMGGQYPTP----NMPYPSPGPYPAPPPPQAPGAAPPVPWGTVPPGAW 199

>CN032_HUMAN (Q8NDC0) Protein C14orf32|
          Length = 245

 Score = 30.0 bits (66), Expect = 3.9
 Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
 Frame = -2

Query: 375 PGLSMAFPRPLKLNNQPMQQVGPVPSLLAPRATGALAPI---TMVGAAW 238
           PG+   +P P    N P    GP P+   P+A GA  P+   T+   AW
Sbjct: 155 PGMGGQYPTP----NMPYPSPGPYPAPPPPQAPGAAPPVPWGTVPPGAW 199

>CN032_BOVIN (Q5E9L3) Protein C14orf32 homolog|
          Length = 240

 Score = 30.0 bits (66), Expect = 3.9
 Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
 Frame = -2

Query: 375 PGLSMAFPRPLKLNNQPMQQVGPVPSLLAPRATGALAPI---TMVGAAW 238
           PG+   +P P    N P    GP P+   P+A GA  P+   T+   AW
Sbjct: 150 PGMGGQYPTP----NMPYPSPGPYPAPPPPQAPGAAPPVPWGTVPPGAW 194

>DSBB_NEIMA (Q9JTA9) Disulfide bond formation protein B (Disulfide|
           oxidoreductase)
          Length = 162

 Score = 29.6 bits (65), Expect = 5.0
 Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
 Frame = +2

Query: 176 ASIHAFCDLKRKLVAFLGLVSQAAPTIVIGASAPVALGARRL--GTGPTCCIGWLFNLRG 349
           A+I   C  +RK     G V  + P +   + A   L  + L  GT P+C   W F L+G
Sbjct: 52  AAIVLMCRPRRKAGGLFGAVFISIPAVTGISVAAYQLWLQSLPPGTAPSCGAPWTFRLKG 111

>DMRT1_PIG (Q9TT01) Doublesex- and mab-3-related transcription factor 1|
          Length = 373

 Score = 29.6 bits (65), Expect = 5.0
 Identities = 18/52 (34%), Positives = 24/52 (46%)
 Frame = -1

Query: 382 ARPGAVNGIPQAPQVEQPAYAAGGASSEPSGTESHRSTGADNDGGSGLADQS 227
           ++P A +  P AP    P   AGG S    GT     +G  + GGSG +  S
Sbjct: 8   SKPSAPSEAPHAPG-PPPQGKAGGFSKALLGTSGGGGSGGSSGGGSGASGMS 58

>KCNH3_HUMAN (Q9ULD8) Potassium voltage-gated channel subfamily H member 3|
            (Voltage-gated potassium channel subunit Kv12.2)
            (Ether-a-go-go-like potassium channel 2) (ELK channel 2)
            (ELK2) (Brain-specific eag-like channel 1) (BEC1)
          Length = 1083

 Score = 29.3 bits (64), Expect = 6.6
 Identities = 23/93 (24%), Positives = 31/93 (33%)
 Frame = -1

Query: 514  PGAGHYMSQVPMFPPRTPLTPXXXXXXXXXXXXXXXLPFAGQMVARPGAVNGIPQAPQVE 335
            PG    M+  P  PP +  +P                P +G + + P      P +P   
Sbjct: 966  PGPPPLMAPWPWGPPASQSSPWPRATAFWTSTSDSEPPASGDLCSEPST----PASPPPS 1021

Query: 334  QPAYAAGGASSEPSGTESHRSTGADNDGGSGLA 236
            +     G A  EP       STG    G  GLA
Sbjct: 1022 EEGARTGPA--EPVSQAEATSTGEPPPGSGGLA 1052

>SCG1_BOVIN (P23389) Secretogranin-1 precursor (Secretogranin I) (SgI)|
           (Chromogranin B) (CgB) [Contains: GAWK peptide; Peptide
           BAM-1745; Secretolytin]
          Length = 646

 Score = 28.9 bits (63), Expect = 8.6
 Identities = 14/38 (36%), Positives = 16/38 (42%)
 Frame = +1

Query: 244 RSHHRYRRQCSCGSRCQKARNWPHLLHRLVVQLEGPGE 357
           +SH R R     G   +   NWP  L R     E PGE
Sbjct: 211 KSHSRERSSQESGEETKSQENWPQELQRHPEGQEAPGE 248

>MARCS_BOVIN (P12624) Myristoylated alanine-rich C-kinase substrate (MARCKS)|
           (ACAMP-81)
          Length = 331

 Score = 28.9 bits (63), Expect = 8.6
 Identities = 20/56 (35%), Positives = 24/56 (42%), Gaps = 5/56 (8%)
 Frame = -1

Query: 397 AGQMVARPGA-----VNGIPQAPQVEQPAYAAGGASSEPSGTESHRSTGADNDGGS 245
           A    A PGA      NG   A   E+PA A  GA+S P+  E      A  D G+
Sbjct: 44  ASPAAAEPGAKEELQANGSAPAADKEEPAAAGSGAAS-PAAAEKDEPAAAAPDAGA 98


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 65,438,037
Number of Sequences: 219361
Number of extensions: 1200711
Number of successful extensions: 3965
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 3758
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3958
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3812186532
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)