Clone Information

BLAST Search Result

Clone Name	rbasd16j04
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	RL72_ARATH (P60039) 60S ribosomal protein L7-2	243	4e-64
2	RL73_ARATH (Q9LHP1) 60S ribosomal protein L7-3	242	6e-64
3	RL71_ARATH (P60040) 60S ribosomal protein L7-1	240	2e-63
4	RL7_HUMAN (P18124) 60S ribosomal protein L7	210	2e-54
5	RL7_BOVIN (Q58DT1) 60S ribosomal protein L7	210	2e-54
6	RL7_MOUSE (P14148) 60S ribosomal protein L7	209	3e-54
7	RL7_RAT (P05426) 60S ribosomal protein L7	209	6e-54
8	RL7_NEUCR (Q7SBD5) 60S ribosomal protein L7	198	8e-51
9	RL7_CAEEL (O01802) 60S ribosomal protein L7	193	4e-49
10	RL7_YARLI (Q6C603) 60S ribosomal protein L7	191	1e-48
11	RL7_DROME (P32100) 60S ribosomal protein L7	191	2e-48
12	RL7_ASHGO (Q755A7) 60S ribosomal protein L7	186	5e-47
13	RL7_DICDI (P11874) 60S ribosomal protein L7	184	2e-46
14	RL7B_YEAST (Q12213) 60S ribosomal protein L7-B (L6B) (YL8B)	184	2e-46
15	RL7A_YEAST (P05737) 60S ribosomal protein L7-A (L6A) (YL8A) (RP11)	184	2e-46
16	RL7C_SCHPO (O60143) 60S ribosomal protein L7-C	181	1e-45
17	RL7_DEBHA (Q6BTA4) 60S ribosomal protein L7	179	4e-45
18	RL7B_SCHPO (P25457) 60S ribosomal protein L7-B	178	8e-45
19	RL7_CANGA (Q6FSN6) 60S ribosomal protein L7	177	1e-44
20	RL7A_SCHPO (P17937) 60S ribosomal protein L7-A	154	1e-37
21	RL7L_HUMAN (Q6DKI1) Ribosomal protein L7-like 1	138	9e-33
22	RL7L_PONPY (Q5RAH8) Ribosomal protein L7-like 1	138	1e-32
23	RLP7_YEAST (P40693) Ribosome biogenesis protein RLP7 (Ribosomal ...	97	3e-20
24	RLP7_CANGA (Q6FS36) Ribosome biogenesis protein RLP7	93	5e-19
25	RLP7_KLULA (P32102) Ribosome biogenesis protein RLP7	92	1e-18
26	RL7_ENCCU (Q8SS93) 60S ribosomal protein L7	91	2e-18
27	RLP7_ASHGO (Q75ET5) Ribosome biogenesis protein RLP7	89	1e-17
28	RLP7_DEBHA (Q6BIF5) Ribosome biogenesis protein RLP7	88	1e-17
29	RLP7_PICJA (P32101) Ribosome biogenesis protein RLP7 (Fragment)	86	9e-17
30	RL30_PYRHO (O59440) 50S ribosomal protein L30P	45	1e-04
31	RL30_PYRFU (Q9HH78) 50S ribosomal protein L30P (PfL30)	45	2e-04
32	HCP_SALTY (Q8ZQE8) Hydroxylamine reductase (EC 1.7.-.-) (Hybrid-...	31	0.019
33	HCP_SALTI (Q8Z829) Hydroxylamine reductase (EC 1.7.-.-) (Hybrid-...	31	0.019
34	RL30_SULSO (Q9UX86) 50S ribosomal protein L30P	38	0.023
35	RL30_METJA (P54046) 50S ribosomal protein L30P	37	0.050
36	RL30_AERPE (Q9YF96) 50S ribosomal protein L30P	37	0.050
37	RL30_SULAC (O05642) 50S ribosomal protein L30P	35	0.11
38	RL30_METVA (P14035) 50S ribosomal protein L30P	35	0.15
39	RL30_METTH (O26132) 50S ribosomal protein L30P	35	0.15
40	RL30_ARCFU (O28375) 50S ribosomal protein L30P	35	0.19
41	MUKF_PASMU (Q9CN38) Chromosome partition protein mukF	32	0.95
42	MUTH_YERPE (Q8ZHU5) DNA mismatch repair protein mutH (Methyl-dir...	31	2.1
43	AX22B_PHAAU (P32294) Auxin-induced protein 22B (Indole-3-acetic ...	31	2.8
44	HCP_SHIFL (Q83S05) Hydroxylamine reductase (EC 1.7.-.-) (Hybrid-...	30	4.7
45	END3_SYNY3 (P73715) Endonuclease III (EC 4.2.99.18) (DNA-(apurin...	30	4.7
46	HCP_ECOLI (P75825) Hydroxylamine reductase (EC 1.7.-.-) (Hybrid-...	30	4.7
47	HCP_ECOL6 (Q8FJE0) Hydroxylamine reductase (EC 1.7.-.-) (Hybrid-...	30	4.7
48	HCP_ECO57 (Q8X6L0) Hydroxylamine reductase (EC 1.7.-.-) (Hybrid-...	30	4.7
49	YR33_THEPE (P15889) Hypothetical 33.4 kDa protein in ribosomal R...	30	6.1
50	AX22D_PHAAU (O24542) Auxin-induced protein 22D (Indole-3-acetic ...	30	6.1
51	P3C2G_MOUSE (O70167) Phosphatidylinositol-4-phosphate 3-kinase C...	30	6.1
52	Y1618_HAEIN (P45275) Hypothetical ABC transporter ATP-binding pr...	30	6.1
53	HCP_YERPE (Q8ZGE1) Hydroxylamine reductase (EC 1.7.-.-) (Hybrid-...	30	6.1
54	GOGA4_HUMAN (Q13439) Golgin subfamily A member 4 (Trans-Golgi p2...	29	8.0
55	MUTH_PHOLL (Q7N124) DNA mismatch repair protein mutH (Methyl-dir...	29	8.0
56	RS8_BUCAI (P57577) 30S ribosomal protein S8	29	8.0

>RL72_ARATH (P60039) 60S ribosomal protein L7-2|
          Length = 242

 Score =  243 bits (619), Expect = 4e-64
 Identities = 114/145 (78%), Positives = 128/145 (88%)
 Frame = -1

Query: 538 KTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLN 359
           KTKKILQLLRLRQIFNGVFLKVNKAT+NMLRRVEPYV YGYPNLKSV+ELIYKRGYGKLN
Sbjct: 98  KTKKILQLLRLRQIFNGVFLKVNKATVNMLRRVEPYVTYGYPNLKSVKELIYKRGYGKLN 157

Query: 358 KQRIPLTNNKVIEEGLGKHNIICIEDVVHEILTVGPHFKEANNFLWPFXXXXXXXXXXXK 179
            QRI LT+N ++++ LGKH IIC+ED++HEI+TVGPHFKEANNFLWPF           K
Sbjct: 158 HQRIALTDNSIVDQALGKHGIICVEDLIHEIMTVGPHFKEANNFLWPFQLKAPLGGLKKK 217

Query: 178 RNHYVEGGDAGNREDYINQLVRRMN 104
           RNHYVEGGDAGNRE++IN+LVRRMN
Sbjct: 218 RNHYVEGGDAGNRENFINELVRRMN 242

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>RL73_ARATH (Q9LHP1) 60S ribosomal protein L7-3|
          Length = 244

 Score =  242 bits (617), Expect = 6e-64
 Identities = 114/145 (78%), Positives = 128/145 (88%)
 Frame = -1

Query: 538 KTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLN 359
           KTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYV YGYPNLKSV+ELIYKRG+GKLN
Sbjct: 100 KTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVTYGYPNLKSVKELIYKRGFGKLN 159

Query: 358 KQRIPLTNNKVIEEGLGKHNIICIEDVVHEILTVGPHFKEANNFLWPFXXXXXXXXXXXK 179
            QR  LT+N ++++GLGKH IIC+ED++HEI+TVGPHFKEANNFLWPF           K
Sbjct: 160 HQRTALTDNSIVDQGLGKHGIICVEDLIHEIMTVGPHFKEANNFLWPFQLKAPLGGMKKK 219

Query: 178 RNHYVEGGDAGNREDYINQLVRRMN 104
           RNHYVEGGDAGNRE++IN+LVRRMN
Sbjct: 220 RNHYVEGGDAGNRENFINELVRRMN 244

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>RL71_ARATH (P60040) 60S ribosomal protein L7-1|
          Length = 242

 Score =  240 bits (613), Expect = 2e-63
 Identities = 114/145 (78%), Positives = 127/145 (87%)
 Frame = -1

Query: 538 KTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLN 359
           KTKKILQLLRLRQIFNGVFLKVNKAT+NMLRRVEPYV YG+PNLKSV+ELIYKRGYGKLN
Sbjct: 98  KTKKILQLLRLRQIFNGVFLKVNKATMNMLRRVEPYVTYGFPNLKSVKELIYKRGYGKLN 157

Query: 358 KQRIPLTNNKVIEEGLGKHNIICIEDVVHEILTVGPHFKEANNFLWPFXXXXXXXXXXXK 179
            QRI LT+N ++E+ LGKH IIC ED++HEILTVGPHFKEANNFLWPF           K
Sbjct: 158 HQRIALTDNSIVEQALGKHGIICTEDLIHEILTVGPHFKEANNFLWPFQLKAPLGGLKKK 217

Query: 178 RNHYVEGGDAGNREDYINQLVRRMN 104
           RNHYVEGGDAGNRE++IN+L+RRMN
Sbjct: 218 RNHYVEGGDAGNRENFINELIRRMN 242

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>RL7_HUMAN (P18124) 60S ribosomal protein L7|
          Length = 248

 Score =  210 bits (535), Expect = 2e-54
 Identities = 100/145 (68%), Positives = 118/145 (81%)
 Frame = -1

Query: 538 KTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLN 359
           K +K+LQLLRLRQIFNG F+K+NKA+INMLR VEPY+A+GYPNLKSV ELIYKRGYGK+N
Sbjct: 104 KVRKVLQLLRLRQIFNGTFVKLNKASINMLRIVEPYIAWGYPNLKSVNELIYKRGYGKIN 163

Query: 358 KQRIPLTNNKVIEEGLGKHNIICIEDVVHEILTVGPHFKEANNFLWPFXXXXXXXXXXXK 179
           K+RI LT+N +I   LGK+ IIC+ED++HEI TVG  FKEANNFLWPF           K
Sbjct: 164 KKRIALTDNALIARSLGKYGIICMEDLIHEIYTVGKRFKEANNFLWPFKLSSPRGGMKKK 223

Query: 178 RNHYVEGGDAGNREDYINQLVRRMN 104
             H+VEGGDAGNRED IN+L+RRMN
Sbjct: 224 TTHFVEGGDAGNREDQINRLIRRMN 248

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>RL7_BOVIN (Q58DT1) 60S ribosomal protein L7|
          Length = 248

 Score =  210 bits (535), Expect = 2e-54
 Identities = 100/145 (68%), Positives = 118/145 (81%)
 Frame = -1

Query: 538 KTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLN 359
           K +K+LQLLRLRQIFNG F+K+NKA+INMLR VEPY+A+GYPNLKSV ELIYKRGYGK+N
Sbjct: 104 KVRKVLQLLRLRQIFNGTFVKLNKASINMLRIVEPYIAWGYPNLKSVNELIYKRGYGKIN 163

Query: 358 KQRIPLTNNKVIEEGLGKHNIICIEDVVHEILTVGPHFKEANNFLWPFXXXXXXXXXXXK 179
           K+RI LT+N +I   LGK+ IIC+ED++HEI TVG  FKEANNFLWPF           K
Sbjct: 164 KKRIALTDNALIARSLGKYGIICMEDLIHEIYTVGKRFKEANNFLWPFKLSSPRGGMKKK 223

Query: 178 RNHYVEGGDAGNREDYINQLVRRMN 104
             H+VEGGDAGNRED IN+L+RRMN
Sbjct: 224 TTHFVEGGDAGNREDQINRLIRRMN 248

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>RL7_MOUSE (P14148) 60S ribosomal protein L7|
          Length = 270

 Score =  209 bits (533), Expect = 3e-54
 Identities = 100/145 (68%), Positives = 117/145 (80%)
 Frame = -1

Query: 538 KTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLN 359
           K +K+LQLLRLRQIFNG F+K+NKA+INMLR VEPY+A+GYPNLKSV ELIYKRGYGK+N
Sbjct: 126 KVRKVLQLLRLRQIFNGTFVKLNKASINMLRIVEPYIAWGYPNLKSVNELIYKRGYGKIN 185

Query: 358 KQRIPLTNNKVIEEGLGKHNIICIEDVVHEILTVGPHFKEANNFLWPFXXXXXXXXXXXK 179
           K+RI LT+N +I   LGK  IIC+ED++HEI TVG  FKEANNFLWPF           K
Sbjct: 186 KKRIALTDNSLIARSLGKFGIICMEDLIHEIYTVGKRFKEANNFLWPFKLSSPRGGMKKK 245

Query: 178 RNHYVEGGDAGNREDYINQLVRRMN 104
             H+VEGGDAGNRED IN+L+RRMN
Sbjct: 246 TTHFVEGGDAGNREDQINRLIRRMN 270

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>RL7_RAT (P05426) 60S ribosomal protein L7|
          Length = 260

 Score =  209 bits (531), Expect = 6e-54
 Identities = 98/145 (67%), Positives = 117/145 (80%)
 Frame = -1

Query: 538 KTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLN 359
           K +K+LQLLRLRQIFNG F+K+NKA++NMLR VEPY+A+GYPNLKSV ELIYKRGYGK+N
Sbjct: 116 KVRKVLQLLRLRQIFNGTFVKLNKASVNMLRIVEPYIAWGYPNLKSVNELIYKRGYGKIN 175

Query: 358 KQRIPLTNNKVIEEGLGKHNIICIEDVVHEILTVGPHFKEANNFLWPFXXXXXXXXXXXK 179
           K+RI LT+N ++   LGK  IIC+ED++HEI TVG  FKEANNFLWPF           K
Sbjct: 176 KKRIALTDNSLVARSLGKFGIICMEDLIHEIYTVGKRFKEANNFLWPFKLSSPRGGMKKK 235

Query: 178 RNHYVEGGDAGNREDYINQLVRRMN 104
             H+VEGGDAGNRED IN+L+RRMN
Sbjct: 236 TTHFVEGGDAGNREDQINRLIRRMN 260

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>RL7_NEUCR (Q7SBD5) 60S ribosomal protein L7|
          Length = 248

 Score =  198 bits (504), Expect = 8e-51
 Identities = 93/146 (63%), Positives = 119/146 (81%), Gaps = 1/146 (0%)
 Frame = -1

Query: 538 KTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLN 359
           K +KILQLLRL QI NGVF++V KAT  M++ VEP+VAYGYPNLKSV+ELIYKRGYGK+N
Sbjct: 103 KPRKILQLLRLLQINNGVFVRVTKATAEMIKIVEPWVAYGYPNLKSVKELIYKRGYGKVN 162

Query: 358 KQRIPLTNNKVIEEGLGKHNIICIEDVVHEILTVGPHFKEANNFLWPFXXXXXXXXXXXK 179
           KQR+ LT+N +IEE LGK+ IIC+ED++HEI TVGP+FK+A+NFLWPF           +
Sbjct: 163 KQRVALTDNSIIEENLGKYGIICMEDLIHEIYTVGPNFKQASNFLWPFKLSNPTGGFRTR 222

Query: 178 R-NHYVEGGDAGNREDYINQLVRRMN 104
           +  H++EGGD GNRE++IN L+R+MN
Sbjct: 223 KFKHFIEGGDLGNREEHINALIRQMN 248

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>RL7_CAEEL (O01802) 60S ribosomal protein L7|
          Length = 244

 Score =  193 bits (490), Expect(2) = 4e-49
 Identities = 88/144 (61%), Positives = 113/144 (78%)
 Frame = -1

Query: 538 KTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLN 359
           K +K LQ+LRLRQI NGVF+K+NKAT+ +LR +EPYVA+GYPN K++ +L+YKRGY K++
Sbjct: 100 KPRKALQILRLRQINNGVFVKLNKATLPLLRIIEPYVAWGYPNNKTIHDLLYKRGYAKVD 159

Query: 358 KQRIPLTNNKVIEEGLGKHNIICIEDVVHEILTVGPHFKEANNFLWPFXXXXXXXXXXXK 179
             R+P+T+N ++E+ LGK NIIC+ED+ HEI TVGPHFKEA NFLWPF           K
Sbjct: 160 GNRVPITDNTIVEQSLGKFNIICLEDLAHEIATVGPHFKEATNFLWPFKLNNPTGGWTKK 219

Query: 178 RNHYVEGGDAGNREDYINQLVRRM 107
            NH+VEGGD GNRED IN L+R+M
Sbjct: 220 TNHFVEGGDFGNREDQINNLLRKM 243



 Score = 21.2 bits (43), Expect(2) = 4e-49
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -3

Query: 563 RGINAMHPKDQE 528
           RGIN +HPK ++
Sbjct: 92  RGINQLHPKPRK 103

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>RL7_YARLI (Q6C603) 60S ribosomal protein L7|
          Length = 250

 Score =  191 bits (485), Expect = 1e-48
 Identities = 89/147 (60%), Positives = 114/147 (77%), Gaps = 2/147 (1%)
 Frame = -1

Query: 538 KTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLN 359
           K +K+LQLLRL QI NGVF+++ KAT  +LR VEPY+A+GYPNL SVR+L+YKRGYGK+N
Sbjct: 104 KPRKVLQLLRLHQINNGVFVRITKATAELLRIVEPYIAFGYPNLASVRQLVYKRGYGKVN 163

Query: 358 KQRIPLTNNKVIEEGLGKHNIICIEDVVHEILTVGPHFKEANNFLWPFXXXXXXXXXXXK 179
           KQRIPL++N +IEE LGK+ IIC+ED++HEI TVGP FK+A+NFLWPF           +
Sbjct: 164 KQRIPLSDNAIIEEALGKYGIICMEDLIHEIYTVGPAFKQASNFLWPFKLSNPSGGWGVR 223

Query: 178 R--NHYVEGGDAGNREDYINQLVRRMN 104
           R   HY+EGG  GNRE+ IN L++  N
Sbjct: 224 RKFKHYIEGGSTGNREENINALIKAQN 250

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>RL7_DROME (P32100) 60S ribosomal protein L7|
          Length = 252

 Score =  191 bits (484), Expect = 2e-48
 Identities = 94/145 (64%), Positives = 113/145 (77%), Gaps = 1/145 (0%)
 Frame = -1

Query: 538 KTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLN 359
           K +K+LQL RLRQI NGVF+K+NKATINMLR  EPY+ +GYPNLKSVRELIYKRG+ K N
Sbjct: 107 KVRKVLQLFRLRQINNGVFIKLNKATINMLRIAEPYITWGYPNLKSVRELIYKRGFVKHN 166

Query: 358 KQRIPLTNNKVIEEGLGK-HNIICIEDVVHEILTVGPHFKEANNFLWPFXXXXXXXXXXX 182
           +QR+P+T+N VIE  L + H I C+ED+VHEI TVGP+FK A+NFLWPF           
Sbjct: 167 RQRVPITDNFVIERKLRQAHQIQCVEDLVHEIFTVGPNFKYASNFLWPFKLNTPTGGWRK 226

Query: 181 KRNHYVEGGDAGNREDYINQLVRRM 107
           K NHYV GGD GNRED IN+L+R+M
Sbjct: 227 KANHYVNGGDFGNREDQINRLLRKM 251

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>RL7_ASHGO (Q755A7) 60S ribosomal protein L7|
          Length = 243

 Score =  186 bits (471), Expect = 5e-47
 Identities = 85/147 (57%), Positives = 113/147 (76%), Gaps = 2/147 (1%)
 Frame = -1

Query: 538 KTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLN 359
           K +K+LQLLRL QI +GVF+KV KAT  +LR VEPYVAYGYP+  ++R+L+YKRGYGK+N
Sbjct: 97  KPRKVLQLLRLNQINSGVFVKVTKATTELLRLVEPYVAYGYPSYSTIRQLVYKRGYGKIN 156

Query: 358 KQRIPLTNNKVIEEGLGKHNIICIEDVVHEILTVGPHFKEANNFLWPFXXXXXXXXXXXK 179
           KQRI L+ N ++E  LGK+ II ++D++HEI+TVGPHFK+ANNFLWPF            
Sbjct: 157 KQRIALSENSIVEANLGKYGIISVDDLIHEIITVGPHFKQANNFLWPFKLSNPSGGWGVP 216

Query: 178 R--NHYVEGGDAGNREDYINQLVRRMN 104
           R   H+++GG  GNRE++IN+LV+ MN
Sbjct: 217 RKFKHFIQGGAFGNREEFINKLVKSMN 243

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>RL7_DICDI (P11874) 60S ribosomal protein L7|
          Length = 245

 Score =  184 bits (466), Expect = 2e-46
 Identities = 86/145 (59%), Positives = 113/145 (77%)
 Frame = -1

Query: 538 KTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLN 359
           K +K+L+LLRL Q+ NGVF+K+NKA+INML+ VEPYVAYG+PNLKS++ELIYKRG+ K++
Sbjct: 101 KPRKVLKLLRLLQLNNGVFVKLNKASINMLKLVEPYVAYGFPNLKSIKELIYKRGHLKID 160

Query: 358 KQRIPLTNNKVIEEGLGKHNIICIEDVVHEILTVGPHFKEANNFLWPFXXXXXXXXXXXK 179
            QRIPLT+N ++E+ LGK  IIC+ED++HEI T G HFK+ NN LWPF           K
Sbjct: 161 GQRIPLTSNDMVEKQLGKFGIICVEDIIHEITTCGKHFKQVNNSLWPFKLNCPRGGFNMK 220

Query: 178 RNHYVEGGDAGNREDYINQLVRRMN 104
           +  +++GGDAGNRE  IN L+ RMN
Sbjct: 221 KTPFLQGGDAGNREHLINNLIHRMN 245

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>RL7B_YEAST (Q12213) 60S ribosomal protein L7-B (L6B) (YL8B)|
          Length = 243

 Score =  184 bits (466), Expect = 2e-46
 Identities = 81/147 (55%), Positives = 115/147 (78%), Gaps = 2/147 (1%)
 Frame = -1

Query: 538 KTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLN 359
           K +K+LQLLRL +I +G F+KV KAT+ +L+ +EPYVAYGYP+  ++R+L+YKRG+GK+N
Sbjct: 97  KPRKVLQLLRLTRINSGTFVKVTKATLELLKLIEPYVAYGYPSYSTIRQLVYKRGFGKIN 156

Query: 358 KQRIPLTNNKVIEEGLGKHNIICIEDVVHEILTVGPHFKEANNFLWPFXXXXXXXXXXXK 179
           KQR+PL++N +IE  LGK+ I+ I+D++HEI+TVGPHFK+ANNFLWPF            
Sbjct: 157 KQRVPLSDNAIIEANLGKYGILSIDDLIHEIITVGPHFKQANNFLWPFKLSNPSGGWGVP 216

Query: 178 R--NHYVEGGDAGNREDYINQLVRRMN 104
           R   H+++GG  GNRE++IN+LV+ MN
Sbjct: 217 RKFKHFIQGGSFGNREEFINKLVKAMN 243

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>RL7A_YEAST (P05737) 60S ribosomal protein L7-A (L6A) (YL8A) (RP11)|
          Length = 243

 Score =  184 bits (466), Expect = 2e-46
 Identities = 81/147 (55%), Positives = 115/147 (78%), Gaps = 2/147 (1%)
 Frame = -1

Query: 538 KTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLN 359
           K +K+LQLLRL +I +G F+KV KAT+ +L+ +EPYVAYGYP+  ++R+L+YKRG+GK+N
Sbjct: 97  KPRKVLQLLRLTRINSGTFVKVTKATLELLKLIEPYVAYGYPSYSTIRQLVYKRGFGKIN 156

Query: 358 KQRIPLTNNKVIEEGLGKHNIICIEDVVHEILTVGPHFKEANNFLWPFXXXXXXXXXXXK 179
           KQR+PL++N +IE  LGK+ I+ I+D++HEI+TVGPHFK+ANNFLWPF            
Sbjct: 157 KQRVPLSDNAIIEANLGKYGILSIDDLIHEIITVGPHFKQANNFLWPFKLSNPSGGWGVP 216

Query: 178 R--NHYVEGGDAGNREDYINQLVRRMN 104
           R   H+++GG  GNRE++IN+LV+ MN
Sbjct: 217 RKFKHFIQGGSFGNREEFINKLVKSMN 243

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>RL7C_SCHPO (O60143) 60S ribosomal protein L7-C|
          Length = 251

 Score =  181 bits (460), Expect = 1e-45
 Identities = 87/145 (60%), Positives = 114/145 (78%), Gaps = 1/145 (0%)
 Frame = -1

Query: 538 KTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLN 359
           K +KI+QLLRL QI NGVF+K NKAT  ML+ VEPYV YG PNLK+VREL+YKRG+GK+N
Sbjct: 106 KARKIMQLLRLIQINNGVFVKFNKATKEMLQVVEPYVTYGIPNLKTVRELLYKRGFGKVN 165

Query: 358 KQRIPLTNNKVIEEGLGKHNIICIEDVVHEILTVGPHFKEANNFLWPFXXXXXXXXXXXK 179
           KQRI L++N +IE  LGK++I+ IED++HEI TVGP+FK+A NF+WPF           +
Sbjct: 166 KQRIALSDNAIIEAALGKYSILSIEDLIHEIYTVGPNFKQAANFIWPFQLSSPLGGWRDR 225

Query: 178 R-NHYVEGGDAGNREDYINQLVRRM 107
           +  H++EGGDAG R+++IN LVR+M
Sbjct: 226 KFKHFIEGGDAGKRDEHINSLVRKM 250

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>RL7_DEBHA (Q6BTA4) 60S ribosomal protein L7|
          Length = 241

 Score =  179 bits (455), Expect = 4e-45
 Identities = 82/146 (56%), Positives = 113/146 (77%), Gaps = 1/146 (0%)
 Frame = -1

Query: 538 KTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLN 359
           K +K+LQLLRL QI  GVF+++ KAT  +L+  EPY+AYGYPNL ++R L+YKRG+GK+N
Sbjct: 96  KPRKVLQLLRLTQINAGVFVRLTKATSELLKLAEPYIAYGYPNLSTIRHLVYKRGHGKIN 155

Query: 358 KQRIPLTNNKVIEEGLGKHNIICIEDVVHEILTVGPHFKEANNFLWPFXXXXXXXXXXXK 179
           KQRI L++N +IE  LGK+ I+ IED++HEI TVGP+FK+ANNFLWPF           +
Sbjct: 156 KQRIALSDNAIIEANLGKYGILSIEDLIHEIYTVGPNFKQANNFLWPFKLSNPNGGFRTR 215

Query: 178 R-NHYVEGGDAGNREDYINQLVRRMN 104
           +  H+++GGD GNRE++IN LV++MN
Sbjct: 216 KFFHFIQGGDTGNREEFINALVKQMN 241

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>RL7B_SCHPO (P25457) 60S ribosomal protein L7-B|
          Length = 250

 Score =  178 bits (452), Expect = 8e-45
 Identities = 85/145 (58%), Positives = 113/145 (77%), Gaps = 1/145 (0%)
 Frame = -1

Query: 538 KTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLN 359
           K +KI+QLLRL QI NG+F+K NKA   ML+ VEPYV YG PN K+VRELIYKRG+GK+N
Sbjct: 105 KARKIMQLLRLLQINNGIFVKFNKAIKEMLQVVEPYVTYGIPNHKTVRELIYKRGFGKVN 164

Query: 358 KQRIPLTNNKVIEEGLGKHNIICIEDVVHEILTVGPHFKEANNFLWPFXXXXXXXXXXXK 179
           KQRIPL++N +IE  LGK++I+ +ED++HEI TVGP+FK+A NFLWPF           +
Sbjct: 165 KQRIPLSDNAIIEAALGKYSILSVEDLIHEIYTVGPNFKQAANFLWPFKLSSPLGGWRER 224

Query: 178 R-NHYVEGGDAGNREDYINQLVRRM 107
           +  H++EGGDAG R+++IN LV++M
Sbjct: 225 KFKHFIEGGDAGKRDEHINGLVQKM 249

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>RL7_CANGA (Q6FSN6) 60S ribosomal protein L7|
          Length = 244

 Score =  177 bits (450), Expect = 1e-44
 Identities = 82/147 (55%), Positives = 111/147 (75%), Gaps = 2/147 (1%)
 Frame = -1

Query: 538 KTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLN 359
           K +K+LQLLRL QI +G F+KV KAT  +L+ +EPYVAYGYP+  +VR+L+YKRG+GK+N
Sbjct: 98  KPRKVLQLLRLTQINSGTFVKVTKATSELLKLIEPYVAYGYPSYSTVRQLVYKRGHGKIN 157

Query: 358 KQRIPLTNNKVIEEGLGKHNIICIEDVVHEILTVGPHFKEANNFLWPFXXXXXXXXXXXK 179
           KQRI L++N ++E  LGK  I+ I+D++HEI+TVGPHFK+ANNFLWPF            
Sbjct: 158 KQRIALSDNAIVEANLGKFGILSIDDLIHEIVTVGPHFKQANNFLWPFKLSNPSGGWGVP 217

Query: 178 R--NHYVEGGDAGNREDYINQLVRRMN 104
           R   H+++GG  GNRE +IN+LV+ MN
Sbjct: 218 RKFKHFIQGGAFGNREQFINKLVKAMN 244

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>RL7A_SCHPO (P17937) 60S ribosomal protein L7-A|
          Length = 249

 Score =  154 bits (390), Expect = 1e-37
 Identities = 78/144 (54%), Positives = 101/144 (70%), Gaps = 1/144 (0%)
 Frame = -1

Query: 538 KTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLN 359
           K +K+L+LLRL +I N VF++ NKA   MLR VEPYV YG PNL SVRELIYKRG+GK+N
Sbjct: 104 KIRKVLRLLRLSRINNAVFVRNNKAVAQMLRIVEPYVMYGIPNLHSVRELIYKRGFGKIN 163

Query: 358 KQRIPLTNNKVIEEGLGKHNIICIEDVVHEILTVGPHFKEANNFLWPFXXXXXXXXXXXK 179
            QRI L++N +IEE LGK+++I IED++HEI  VG HFKE   FLWPF           K
Sbjct: 164 GQRIALSDNALIEEALGKYDVISIEDIIHEIYNVGSHFKEVTKFLWPFTLTPVKHSLMEK 223

Query: 178 R-NHYVEGGDAGNREDYINQLVRR 110
           +  H+ EG  AG   + IN+L+++
Sbjct: 224 KVKHFNEGRKAGYCGEEINELIKK 247

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>RL7L_HUMAN (Q6DKI1) Ribosomal protein L7-like 1|
          Length = 246

 Score =  138 bits (348), Expect = 9e-33
 Identities = 70/143 (48%), Positives = 94/143 (65%)
 Frame = -1

Query: 532 KKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQ 353
           ++ +  LRL++IF+GVF+KV    + MLR VEPYV +G+PNLKSVRELI KRG  K+  +
Sbjct: 104 QRTIARLRLKKIFSGVFVKVTPQNLKMLRIVEPYVTWGFPNLKSVRELILKRGQAKVKNK 163

Query: 352 RIPLTNNKVIEEGLGKHNIICIEDVVHEILTVGPHFKEANNFLWPFXXXXXXXXXXXKRN 173
            IPLT+N VIEE LGK  +IC+ED++HEI   G HF+E + FL PF           +  
Sbjct: 164 TIPLTDNTVIEEHLGKFGVICLEDLIHEIAFPGKHFQEISWFLCPFHLSVARHATKNRVG 223

Query: 172 HYVEGGDAGNREDYINQLVRRMN 104
              E G  G R + INQL+R++N
Sbjct: 224 FLKEMGTPGYRGERINQLIRQLN 246

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>RL7L_PONPY (Q5RAH8) Ribosomal protein L7-like 1|
          Length = 246

 Score =  138 bits (347), Expect = 1e-32
 Identities = 70/143 (48%), Positives = 94/143 (65%)
 Frame = -1

Query: 532 KKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQ 353
           ++ +  LRL++IF+GVF+KV    + MLR VEPYV +G+PNLKSVRELI KRG  K+  +
Sbjct: 104 QRTIARLRLKKIFSGVFVKVTPQNLKMLRIVEPYVTWGFPNLKSVRELILKRGQAKVKNK 163

Query: 352 RIPLTNNKVIEEGLGKHNIICIEDVVHEILTVGPHFKEANNFLWPFXXXXXXXXXXXKRN 173
            IPLT+N VIEE LGK  +IC+ED++HEI   G HF+E + FL PF           +  
Sbjct: 164 TIPLTDNTVIEEHLGKFGVICLEDLIHEIAFPGKHFQEISWFLRPFHLSVARHATKNRVG 223

Query: 172 HYVEGGDAGNREDYINQLVRRMN 104
              E G  G R + INQL+R++N
Sbjct: 224 FLKEMGTPGYRGERINQLIRQLN 246

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>RLP7_YEAST (P40693) Ribosome biogenesis protein RLP7 (Ribosomal protein|
           L7-like)
          Length = 322

 Score = 97.1 bits (240), Expect = 3e-20
 Identities = 51/114 (44%), Positives = 67/114 (58%), Gaps = 6/114 (5%)
 Frame = -1

Query: 538 KTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYKRGY---- 371
           K  KIL LLRL +   GVF+K+ K    +L+ + PYV  G P+L S+R LI KRG     
Sbjct: 158 KAFKILSLLRLVETNTGVFVKLTKNVYPLLKVIAPYVVIGKPSLSSIRSLIQKRGRIIYK 217

Query: 370 --GKLNKQRIPLTNNKVIEEGLGKHNIICIEDVVHEILTVGPHFKEANNFLWPF 215
              +     I L +N ++EE LG H IIC+ED++HEI T+G  F   N FL PF
Sbjct: 218 GENEAEPHEIVLNDNNIVEEQLGDHGIICVEDIIHEIATMGESFSVCNFFLQPF 271

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>RLP7_CANGA (Q6FS36) Ribosome biogenesis protein RLP7|
          Length = 317

 Score = 93.2 bits (230), Expect = 5e-19
 Identities = 48/121 (39%), Positives = 75/121 (61%), Gaps = 6/121 (4%)
 Frame = -1

Query: 559 VSMPCTQKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYK 380
           V+     K  +IL  LRL ++   VF+K+ + T ++L+ + PYV  G P+LKS+R LI K
Sbjct: 146 VAASIPHKAYRILSTLRLEEVNTAVFIKLTETTFSLLKIIAPYVIVGKPSLKSIRSLIQK 205

Query: 379 RG---YGKLNKQ---RIPLTNNKVIEEGLGKHNIICIEDVVHEILTVGPHFKEANNFLWP 218
           R    Y + +++    I L +N ++EE LG   +ICI+D++HEI T+G +F + N FL P
Sbjct: 206 RSKIVYKREDEEEAKEIILNDNNIVEEKLGDCGVICIDDIIHEIATLGENFTKCNFFLQP 265

Query: 217 F 215
           F
Sbjct: 266 F 266

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>RLP7_KLULA (P32102) Ribosome biogenesis protein RLP7|
          Length = 318

 Score = 91.7 bits (226), Expect = 1e-18
 Identities = 47/114 (41%), Positives = 68/114 (59%), Gaps = 6/114 (5%)
 Frame = -1

Query: 538 KTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLN 359
           K  K+L LLRL ++  GVF+K+ K    +L+ V PY+  G P+L S+R LI KR      
Sbjct: 154 KAYKVLSLLRLVELNTGVFIKLTKDVYPLLKLVSPYIVIGQPSLASIRSLIQKRSRIMWQ 213

Query: 358 K------QRIPLTNNKVIEEGLGKHNIICIEDVVHEILTVGPHFKEANNFLWPF 215
           +      + I L +N ++EE LG   +ICIED++HEI T+G +F +   FL PF
Sbjct: 214 RPEDKEPKEIILNDNNIVEEKLGDEGVICIEDIIHEISTLGENFSKCTFFLLPF 267

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>RL7_ENCCU (Q8SS93) 60S ribosomal protein L7|
          Length = 239

 Score = 90.9 bits (224), Expect = 2e-18
 Identities = 50/148 (33%), Positives = 87/148 (58%), Gaps = 1/148 (0%)
 Frame = -1

Query: 547 CTQKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYKRGYG 368
           C  K +K+L+L RL++I   V ++ NK+T  ML+ ++ +VA+G   ++ +R+L+Y +G G
Sbjct: 93  CPPKVRKVLELFRLKRINTCVLVRNNKSTRKMLQIIKDHVAFGTIGMELLRKLVYTKGSG 152

Query: 367 KLNKQRIPLTNNKVIEEGLGKHNIICIEDVVHEILTVGPHFKEANNFLWPFXXXXXXXXX 188
           +    R+ LTN  + +   GK  I CIE++VH I      FK+ N+FL+PF         
Sbjct: 153 RNGHVRVKLTNEFIEDMFDGK--IRCIEELVHHIYNGTEMFKKVNSFLYPFHLSPPRGGF 210

Query: 187 XXKRN-HYVEGGDAGNREDYINQLVRRM 107
             +++  + +GG  GN +D ++ L+ RM
Sbjct: 211 KGQKSKSFNDGGSVGNHQDLLSNLLERM 238

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>RLP7_ASHGO (Q75ET5) Ribosome biogenesis protein RLP7|
          Length = 293

 Score = 88.6 bits (218), Expect = 1e-17
 Identities = 45/115 (39%), Positives = 68/115 (59%), Gaps = 6/115 (5%)
 Frame = -1

Query: 541 QKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYKRGY--- 371
           +K  ++L LLRL ++  GVF+++      +L+ V PYV  G P+L S+R L+ KR     
Sbjct: 128 RKAHRVLTLLRLAEVNTGVFVRLTAEVFPLLQVVAPYVVVGRPSLASIRALVQKRARVVH 187

Query: 370 ---GKLNKQRIPLTNNKVIEEGLGKHNIICIEDVVHEILTVGPHFKEANNFLWPF 215
              G+     + L +N V+EE LG   +IC+ED++HEI T+G  F + N FL PF
Sbjct: 188 QRAGEAAPVEMVLNDNGVVEERLGDEGVICVEDIIHEIATMGEAFAKCNFFLLPF 242

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>RLP7_DEBHA (Q6BIF5) Ribosome biogenesis protein RLP7|
          Length = 275

 Score = 88.2 bits (217), Expect = 1e-17
 Identities = 47/115 (40%), Positives = 71/115 (61%), Gaps = 7/115 (6%)
 Frame = -1

Query: 538 KTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYKRGY---- 371
           K +K+L LLRL +   GVF+K+  AT+ +L+ + PY+  G P+L S+R+L  KR      
Sbjct: 112 KARKVLHLLRLNRPNTGVFVKLTPATVPLLKLISPYIVAGKPSLNSIRKLFQKRACISVI 171

Query: 370 -GKLNKQRI-PLTNNKVIEEGLGKH-NIICIEDVVHEILTVGPHFKEANNFLWPF 215
             +  + RI  L NN V+E+  G     ICIED++HE+ T+G HFK  +N++ PF
Sbjct: 172 DEETKEPRITKLDNNGVVEDKFGDDLGCICIEDLIHELATLGEHFKTVSNWILPF 226

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>RLP7_PICJA (P32101) Ribosome biogenesis protein RLP7 (Fragment)|
          Length = 212

 Score = 85.5 bits (210), Expect = 9e-17
 Identities = 43/114 (37%), Positives = 69/114 (60%), Gaps = 6/114 (5%)
 Frame = -1

Query: 538 KTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYKRGYGKL- 362
           K +K+LQLLRL +I +GVF+K+ +    +L+ + PY     P+L++VR+L+ KR    + 
Sbjct: 49  KVQKVLQLLRLNKINSGVFVKLTETVYPLLKLLSPYTVIXQPSLQTVRQLVQKRATVTVT 108

Query: 361 -----NKQRIPLTNNKVIEEGLGKHNIICIEDVVHEILTVGPHFKEANNFLWPF 215
                  +++ L +N ++EE LG   IICIED++HE   +   FK   +FL PF
Sbjct: 109 HANDEEPRQVKLNDNNLVEEKLGDEGIICIEDIIHETSHLATTFKTVTHFLDPF 162

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>RL30_PYRHO (O59440) 50S ribosomal protein L30P|
          Length = 155

 Score = 45.1 bits (105), Expect = 1e-04
 Identities = 37/140 (26%), Positives = 69/140 (49%), Gaps = 1/140 (0%)
 Frame = -1

Query: 523 LQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQRIP 344
           L +LRL ++ + V +    + + ML++ + Y+ +G  N +++ +LI KRG    NK   P
Sbjct: 23  LAMLRLHRVNHCVIVDDTPSYLGMLQKAKDYITWGEINAETLAKLIRKRGKLIGNK---P 79

Query: 343 LTNNKVIEEGLGKHNIICIEDVVHEILTVGPHFKEANNFLWPFXXXXXXXXXXXKRNH-Y 167
           +T+ + ++E LG    + IE+   +++      K+  N    F            +   +
Sbjct: 80  VTD-EYVKEKLG----MTIEEFAQKVINGEMSLKDLPNLKPVFRLHPPRGGFKGSKKRSF 134

Query: 166 VEGGDAGNREDYINQLVRRM 107
            EGG  G R + IN+L+ RM
Sbjct: 135 QEGGALGYRGEKINELIERM 154

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>RL30_PYRFU (Q9HH78) 50S ribosomal protein L30P (PfL30)|
          Length = 155

 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 37/140 (26%), Positives = 69/140 (49%), Gaps = 1/140 (0%)
 Frame = -1

Query: 523 LQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQRIP 344
           L +LRL ++ + V +    + + ML++ + Y+ +G  N +++ +LI KRG    NK   P
Sbjct: 23  LAMLRLHRVNHCVIVDDTPSYLGMLQKAKDYITWGEINAETLAKLIRKRGRLIGNK---P 79

Query: 343 LTNNKVIEEGLGKHNIICIEDVVHEILTVGPHFKEANNFLWPFXXXXXXXXXXXKRNH-Y 167
           +T+ + ++E LG    + IE+   +++      K+  N    F            +   +
Sbjct: 80  VTD-EYVKEKLG----MTIEEFAQKVVNGEMSLKDLPNLKPVFRLHPPRGGFRGSKKRSF 134

Query: 166 VEGGDAGNREDYINQLVRRM 107
            EGG  G R + IN+L+ RM
Sbjct: 135 KEGGALGYRGEKINELIERM 154

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>HCP_SALTY (Q8ZQE8) Hydroxylamine reductase (EC 1.7.-.-) (Hybrid-cluster|
           protein) (HCP)
          Length = 550

 Score = 30.8 bits (68), Expect(2) = 0.019
 Identities = 24/98 (24%), Positives = 50/98 (51%), Gaps = 9/98 (9%)
 Frame = -1

Query: 565 SEVSMPCTQKTKKILQLLRLRQIFNGVFLKVNKAT-INMLRRVEPYVAYGYPNLKSVREL 389
           ++V++  T+    ++    L+ ++N   L+  + T +N+    E   A+GYP L+  + L
Sbjct: 232 TQVNVKATEGKCILISGHDLKDLYN--LLEQTEGTGVNVYTHGEMLPAHGYPELRKFKHL 289

Query: 388 IYKRGYGKLNKQ----RIP----LTNNKVIEEGLGKHN 299
           +   G G  N+Q    R P    +T+N +I+  +G ++
Sbjct: 290 VGNYGSGWQNQQVEFARFPGPIVMTSNCIIDPTVGSYD 327



 Score = 26.2 bits (56), Expect(2) = 0.019
 Identities = 15/34 (44%), Positives = 17/34 (50%), Gaps = 3/34 (8%)
 Frame = -3

Query: 272 RDLDGWPS---LQGGQQLPVAIQAQGAAGRPQEE 180
           R + GWP    L+G    PV  QAQ  AG P  E
Sbjct: 333 RSIVGWPGVSHLEGDDFGPVIAQAQQMAGFPYSE 366

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>HCP_SALTI (Q8Z829) Hydroxylamine reductase (EC 1.7.-.-) (Hybrid-cluster|
           protein) (HCP)
          Length = 550

 Score = 30.8 bits (68), Expect(2) = 0.019
 Identities = 24/98 (24%), Positives = 50/98 (51%), Gaps = 9/98 (9%)
 Frame = -1

Query: 565 SEVSMPCTQKTKKILQLLRLRQIFNGVFLKVNKAT-INMLRRVEPYVAYGYPNLKSVREL 389
           ++V++  T+    ++    L+ ++N   L+  + T +N+    E   A+GYP L+  + L
Sbjct: 232 TQVNVKATEGKCILISGHDLKDLYN--LLEQTEGTGVNVYTHGEMLPAHGYPELRKFKHL 289

Query: 388 IYKRGYGKLNKQ----RIP----LTNNKVIEEGLGKHN 299
           +   G G  N+Q    R P    +T+N +I+  +G ++
Sbjct: 290 VGNYGSGWQNQQVEFARFPGPIVMTSNCIIDPTVGSYD 327



 Score = 26.2 bits (56), Expect(2) = 0.019
 Identities = 15/34 (44%), Positives = 17/34 (50%), Gaps = 3/34 (8%)
 Frame = -3

Query: 272 RDLDGWPS---LQGGQQLPVAIQAQGAAGRPQEE 180
           R + GWP    L+G    PV  QAQ  AG P  E
Sbjct: 333 RSIVGWPGVSHLEGDDFGPVIAQAQQMAGFPYSE 366

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>RL30_SULSO (Q9UX86) 50S ribosomal protein L30P|
          Length = 158

 Score = 37.7 bits (86), Expect = 0.023
 Identities = 36/143 (25%), Positives = 61/143 (42%), Gaps = 4/143 (2%)
 Frame = -1

Query: 523 LQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQRIP 344
           L +LRLR  FN +        + ML +V PY+ +G  +  +++ LI  R    L   +  
Sbjct: 24  LNMLRLRYNFNTMVYPKTSQILGMLNKVSPYITWGEIDPDTLKLLIINR----LETVKGD 79

Query: 343 LTNNKVIEEGLGKHNIICIEDVVHE----ILTVGPHFKEANNFLWPFXXXXXXXXXXXKR 176
             ++  ++E L   NI  +   ++E    +  +  +FK       P             +
Sbjct: 80  KVSDSYVKEVLKIENIDAMVKQLYEGKIYLHKLDEYFKLPIRLHPP-----RGGFKGSVK 134

Query: 175 NHYVEGGDAGNREDYINQLVRRM 107
             Y   G+ G R D IN+L+RRM
Sbjct: 135 RPYKNKGEFGYRGDKINELMRRM 157

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>RL30_METJA (P54046) 50S ribosomal protein L30P|
          Length = 154

 Score = 36.6 bits (83), Expect = 0.050
 Identities = 34/140 (24%), Positives = 67/140 (47%), Gaps = 1/140 (0%)
 Frame = -1

Query: 523 LQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQRIP 344
           L++LRL ++ + V +   +    ML++V+ YV +G  +  ++ +LI KRG    NK+   
Sbjct: 22  LKMLRLHKVNHCVIIPETETFKGMLQKVKDYVTWGEIDKDTLVKLILKRGRLPGNKK--- 78

Query: 343 LTNNKVIEEGLGKHNIICIEDVVHEILTVGPHFKEAN-NFLWPFXXXXXXXXXXXKRNHY 167
             N ++I+E  G    + +E++  +I+      KE     ++              +  +
Sbjct: 79  -VNPEIIKELTG----MDVEELAEKIINGEIKLKETPLKPVFRLHPPRKGFERGGIKKPF 133

Query: 166 VEGGDAGNREDYINQLVRRM 107
             GG  G R + IN+L+ +M
Sbjct: 134 SVGGALGYRGEKINELLEKM 153

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>RL30_AERPE (Q9YF96) 50S ribosomal protein L30P|
          Length = 162

 Score = 36.6 bits (83), Expect = 0.050
 Identities = 39/145 (26%), Positives = 69/145 (47%), Gaps = 4/145 (2%)
 Frame = -1

Query: 529 KILQLLRLRQIFNG-VFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQ 353
           K L LLRLR+ +   ++        +MLR VE +  YG    + + EL+ KRG    +K 
Sbjct: 24  KTLYLLRLRRRYTASIYHDSLPGLRDMLRTVEAWTTYGEIEERVLEELLRKRGRIVGDK- 82

Query: 352 RIPLTNNKVIEEGLGKHNIICIEDVVHEILTVGPHF-KEANNFLWPFXXXX--XXXXXXX 182
             PLT +K +EE LG   +  + ++  ++++   H+ +     + PF             
Sbjct: 83  --PLT-DKWVEENLG---LSGLGELAEKLVSGELHYHRLEEKGVKPFFRLHPPRGGFKKS 136

Query: 181 KRNHYVEGGDAGNREDYINQLVRRM 107
            +  + +GG+ G R   IN+L+ +M
Sbjct: 137 IKRMFRDGGELGYRGSAINELILKM 161

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>RL30_SULAC (O05642) 50S ribosomal protein L30P|
          Length = 156

 Score = 35.4 bits (80), Expect = 0.11
 Identities = 36/140 (25%), Positives = 56/140 (40%), Gaps = 1/140 (0%)
 Frame = -1

Query: 523 LQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQRIP 344
           L +LRL+  FN +    + +   ML  V  YV +G  N + +R L+      KL   R  
Sbjct: 24  LSMLRLKNAFNAMIYPKDSSIQGMLNLVSSYVTWGELNDEGLRLLV-----SKLEISRGK 78

Query: 343 LTNNKVIEEGLGKHNIICIEDVVHEILTVGPHFKEANNFLWPFXXX-XXXXXXXXKRNHY 167
             N + +++ L       +E +    L +    K    F  P                 +
Sbjct: 79  KVNEEYVKDKLNVDFQSFVESIKDGKLRLN---KLDEIFSLPIRLHPPKGGFKGKVSRPF 135

Query: 166 VEGGDAGNREDYINQLVRRM 107
             GG+ G R D IN+L+RRM
Sbjct: 136 RAGGEFGYRGDKINELIRRM 155

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>RL30_METVA (P14035) 50S ribosomal protein L30P|
          Length = 154

 Score = 35.0 bits (79), Expect = 0.15
 Identities = 25/90 (27%), Positives = 44/90 (48%)
 Frame = -1

Query: 523 LQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQRIP 344
           +++LRL ++ + V +  N     M+++V+ YV YG  + +++  LI KRG          
Sbjct: 22  MKMLRLHRVNHCVVIPENDHYTGMIKKVKDYVTYGEIDKETLVSLILKRG---------R 72

Query: 343 LTNNKVIEEGLGKHNIICIEDVVHEILTVG 254
           L  NK + E L K  +    D + E +  G
Sbjct: 73  LAGNKRLSEELLKELVELPVDALAEKVLAG 102

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>RL30_METTH (O26132) 50S ribosomal protein L30P|
          Length = 152

 Score = 35.0 bits (79), Expect = 0.15
 Identities = 29/139 (20%), Positives = 62/139 (44%)
 Frame = -1

Query: 523 LQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQRIP 344
           +++LRL +I + V ++   + + ML++ + Y+ +G  + +++  +I KRG       R+ 
Sbjct: 21  MEMLRLNRINHAVLVEDTPSYLGMLQKAKDYITWGEVDQETLTAMIRKRG-------RL- 72

Query: 343 LTNNKVIEEGLGKHNIICIEDVVHEILTVGPHFKEANNFLWPFXXXXXXXXXXXKRNHYV 164
           +  +++ +E + +       D     +  G    E       F            +  + 
Sbjct: 73  IGGDRITDEYINEKTAYGSVDEFAAAVFSGEVKLEEAGIKPVFRLHPPRKGYEGIKKAFN 132

Query: 163 EGGDAGNREDYINQLVRRM 107
           EGG  G R + IN L++RM
Sbjct: 133 EGGSLGYRGEKINDLLKRM 151

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>RL30_ARCFU (O28375) 50S ribosomal protein L30P|
          Length = 152

 Score = 34.7 bits (78), Expect = 0.19
 Identities = 37/145 (25%), Positives = 66/145 (45%)
 Frame = -1

Query: 541 QKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYKRGYGKL 362
           +K K+ L++LRL + ++ V +    +   ML+ V+ YVAYG  N +++  L+  RG    
Sbjct: 15  RKIKETLKMLRLHKRYHCVVIPDTPSYRGMLQVVKDYVAYGEINAETLALLLRLRGRLTG 74

Query: 361 NKQRIPLTNNKVIEEGLGKHNIICIEDVVHEILTVGPHFKEANNFLWPFXXXXXXXXXXX 182
           N++   LT+  V E    K     IE+    ++      K+  +    F           
Sbjct: 75  NRK---LTDEYVKE----KTGYETIEEFAKAVVEGKASLKDLPDLKPVFRLHPPRKGIKN 127

Query: 181 KRNHYVEGGDAGNREDYINQLVRRM 107
            + HY   G+ G   + IN+L+ +M
Sbjct: 128 IKWHYPR-GNLGYHGEEINRLLYKM 151

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>MUKF_PASMU (Q9CN38) Chromosome partition protein mukF|
          Length = 441

 Score = 32.3 bits (72), Expect = 0.95
 Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
 Frame = +2

Query: 245 EVRANRQDLVDNVFNADDVVLSKTL-LDDLVVGQRNPLLVELSITSLVDQLPHTLQVRVP 421
           E   N ++L D +  A D + ++ L + D V+GQ N   VE  IT L  +L   +     
Sbjct: 210 ETSGNLRELQDTLNAAGDKLQAQLLRIQDCVIGQENLAFVEQLITDLQAKLDRIISWGQQ 269

Query: 422 ICNIWLDPAEHV 457
             ++W+    HV
Sbjct: 270 AIDLWIGYDRHV 281

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>MUTH_YERPE (Q8ZHU5) DNA mismatch repair protein mutH (Methyl-directed mismatch|
           repair protein)
          Length = 228

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
 Frame = -3

Query: 329 GHRGGSWKAQHHLH*RRCPRDLDGWPSLQGGQQLPVAIQAQGAA---GRPQEEEEPLRRG 159
           G+ G +W++ H  H  +  R L  W  ++G + +P+A +  GA        EEEE LRR 
Sbjct: 102 GNSGVTWESSHVRH--KLARVL--WVPVEGERHIPLAERRVGAPLLWSPNVEEEELLRRD 157

Query: 158 W 156
           W
Sbjct: 158 W 158

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>AX22B_PHAAU (P32294) Auxin-induced protein 22B (Indole-3-acetic acid-induced|
           protein ARG4)
          Length = 196

 Score = 30.8 bits (68), Expect = 2.8
 Identities = 15/47 (31%), Positives = 27/47 (57%)
 Frame = -1

Query: 493 NGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQ 353
           +G+F+KV+      LR+V+  V  GYP L    E ++K   G+ +++
Sbjct: 98  DGIFVKVSMDGAPYLRKVDLKVYGGYPELLKALETMFKLAIGEYSER 144

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>HCP_SHIFL (Q83S05) Hydroxylamine reductase (EC 1.7.-.-) (Hybrid-cluster|
           protein) (HCP)
          Length = 552

 Score = 30.0 bits (66), Expect = 4.7
 Identities = 22/79 (27%), Positives = 41/79 (51%), Gaps = 9/79 (11%)
 Frame = -1

Query: 508 LRQIFNGVFLKVNKAT-INMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQ----RIP 344
           L+ ++N   L+  + T +N+    E   A+GYP L+  + L+   G G  N+Q    R P
Sbjct: 253 LKDLYN--LLEQTEGTGVNVYTHGEMLPAHGYPELRKFKHLVGNYGSGWQNQQVEFARFP 310

Query: 343 ----LTNNKVIEEGLGKHN 299
               +T+N +I+  +G ++
Sbjct: 311 GPIVMTSNCIIDPTVGAYD 329

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>END3_SYNY3 (P73715) Endonuclease III (EC 4.2.99.18) (DNA-(apurinic or|
           apyrimidinic site) lyase)
          Length = 219

 Score = 30.0 bits (66), Expect = 4.7
 Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
 Frame = -1

Query: 478 KVNKATINMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQRIPLTNNKVIEEGLGKHN 299
           +VNK T  + +R     A  Y + + + ELI+  G+ +   + I     K++EE  G+  
Sbjct: 55  RVNKVTPALFQRYPDANALAYGDRQEIEELIHSTGFFRNKAKNIQGACRKIVEEFDGE-- 112

Query: 298 IICIEDVVHEILTV-GPHFKEAN 233
              +   + E+LT+ G   K AN
Sbjct: 113 ---VPQRMEELLTLPGVARKTAN 132

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>HCP_ECOLI (P75825) Hydroxylamine reductase (EC 1.7.-.-) (Hybrid-cluster|
           protein) (HCP)
          Length = 550

 Score = 30.0 bits (66), Expect = 4.7
 Identities = 22/79 (27%), Positives = 41/79 (51%), Gaps = 9/79 (11%)
 Frame = -1

Query: 508 LRQIFNGVFLKVNKAT-INMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQ----RIP 344
           L+ ++N   L+  + T +N+    E   A+GYP L+  + L+   G G  N+Q    R P
Sbjct: 251 LKDLYN--LLEQTEGTGVNVYTHGEMLPAHGYPELRKFKHLVGNYGSGWQNQQVEFARFP 308

Query: 343 ----LTNNKVIEEGLGKHN 299
               +T+N +I+  +G ++
Sbjct: 309 GPIVMTSNCIIDPTVGAYD 327

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>HCP_ECOL6 (Q8FJE0) Hydroxylamine reductase (EC 1.7.-.-) (Hybrid-cluster|
           protein) (HCP)
          Length = 550

 Score = 30.0 bits (66), Expect = 4.7
 Identities = 22/79 (27%), Positives = 41/79 (51%), Gaps = 9/79 (11%)
 Frame = -1

Query: 508 LRQIFNGVFLKVNKAT-INMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQ----RIP 344
           L+ ++N   L+  + T +N+    E   A+GYP L+  + L+   G G  N+Q    R P
Sbjct: 251 LKDLYN--LLEQTEGTGVNVYTHGEMLPAHGYPELRKFKHLVGNYGSGWQNQQVEFARFP 308

Query: 343 ----LTNNKVIEEGLGKHN 299
               +T+N +I+  +G ++
Sbjct: 309 GPIVMTSNCIIDPTVGAYD 327

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>HCP_ECO57 (Q8X6L0) Hydroxylamine reductase (EC 1.7.-.-) (Hybrid-cluster|
           protein) (HCP)
          Length = 550

 Score = 30.0 bits (66), Expect = 4.7
 Identities = 22/79 (27%), Positives = 41/79 (51%), Gaps = 9/79 (11%)
 Frame = -1

Query: 508 LRQIFNGVFLKVNKAT-INMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQ----RIP 344
           L+ ++N   L+  + T +N+    E   A+GYP L+  + L+   G G  N+Q    R P
Sbjct: 251 LKDLYN--LLEQTEGTGVNVYTHGEMLPAHGYPELRKFKHLVGNYGSGWQNQQVEFARFP 308

Query: 343 ----LTNNKVIEEGLGKHN 299
               +T+N +I+  +G ++
Sbjct: 309 GPIVMTSNCIIDPTVGAYD 327

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>YR33_THEPE (P15889) Hypothetical 33.4 kDa protein in ribosomal RNA operon|
          Length = 300

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 1/86 (1%)
 Frame = -1

Query: 496 FNG-VFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQRIPLTNNKVIE 320
           FNG V+  + +  +  L+   PYV Y   +L+ V EL+ +RG G L           V++
Sbjct: 73  FNGDVYKALEQTGVEFLKYDPPYV-YTRSDLREVIELMVERGIGAL----------AVVD 121

Query: 319 EGLGKHNIICIEDVVHEILTVGPHFK 242
           E L    I+    V+  +  V  H K
Sbjct: 122 EDLRVVGIVSERHVISLLANVETHVK 147

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>AX22D_PHAAU (O24542) Auxin-induced protein 22D (Indole-3-acetic acid-induced|
           protein ARG13)
          Length = 193

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 14/47 (29%), Positives = 28/47 (59%)
 Frame = -1

Query: 493 NGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQ 353
           NG+++KV+ A    LR+++  V   YP L    E ++K  +G+ +++
Sbjct: 96  NGMYVKVSMAGAPYLRKIDLKVYKSYPELLKALENMFKCIFGEYSER 142

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>P3C2G_MOUSE (O70167) Phosphatidylinositol-4-phosphate 3-kinase C2|
            domain-containing gamma polypeptide (EC 2.7.1.154)
            (Phosphoinositide 3-Kinase-C2-gamma) (PtdIns-3-kinase C2
            gamma) (PI3K-C2gamma)
          Length = 1506

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 35/130 (26%), Positives = 52/130 (40%), Gaps = 15/130 (11%)
 Frame = +2

Query: 200  RRLELEWPQEVVGLLEVRANRQDLVDNVFNADDVVLSKTLLD---DLVVGQRNPLLVELS 370
            RR     P E +GLL  R   QD+ +      D +L+  LLD    LV   +    +E  
Sbjct: 775  RRWTFSHPWEALGLLTSRFPDQDIREVAVQQLDTLLTDELLDCLPQLVQAVKFEWNLESP 834

Query: 371  ITSLVDQLPHTLQVRVPICNIWLDPAEHVDGGLVNLEEHSI------------EYLSQTQ 514
            +  L+ + P    +RV  C  WL      +    +  +  +            E LS+ Q
Sbjct: 835  LVELLPRRP-LQSIRVAHCLYWLLRDAQGEAYFKSWYQELLAALQFCAGEALNEELSKEQ 893

Query: 515  KLEDLLGLLG 544
            KL  LLG +G
Sbjct: 894  KLVKLLGDIG 903

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>Y1618_HAEIN (P45275) Hypothetical ABC transporter ATP-binding protein HI1618|
          Length = 217

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 13/53 (24%)
 Frame = +2

Query: 287 NADDVVLSKTLLDDLVVGQRN-------------PLLVELSITSLVDQLPHTL 406
           NADD +   T+LDD+  G  N               L  L IT L D++ HTL
Sbjct: 96  NADDQLFGPTVLDDIAFGPLNQNVPREQAYHIAEQQLERLGITRLKDRMVHTL 148

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>HCP_YERPE (Q8ZGE1) Hydroxylamine reductase (EC 1.7.-.-) (Hybrid-cluster|
           protein) (HCP)
          Length = 550

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 8/61 (13%)
 Frame = -1

Query: 460 INMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQR--------IPLTNNKVIEEGLGK 305
           IN+    E   A+GYP LK    L+   G G  N+Q         I +T+N +I+  +G 
Sbjct: 266 INIYTHGEMLPAHGYPELKRYPHLVGNYGSGWQNQQTEFAKFPGPILMTSNCIIDPNVGN 325

Query: 304 H 302
           +
Sbjct: 326 Y 326

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>GOGA4_HUMAN (Q13439) Golgin subfamily A member 4 (Trans-Golgi p230) (256 kDa|
            golgin) (Golgin-245) (Protein 72.1)
          Length = 2230

 Score = 29.3 bits (64), Expect = 8.0
 Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
 Frame = +2

Query: 338  GQRNPLLVELSITSLVDQLPHTLQVRVPICNIWLDPAEHVDGGLVNLEE-HSIEYLSQTQ 514
            G +N +  + ++ ++ D +  TLQ +   C I     + +D  LV  +E H +E    T 
Sbjct: 1820 GGKNNIQAKQNLENVFDDVQKTLQEKELTCQILEQKIKELDSCLVRQKEVHRVEMEELTS 1879

Query: 515  KLEDLLGL 538
            K E L  L
Sbjct: 1880 KYEKLQAL 1887

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>MUTH_PHOLL (Q7N124) DNA mismatch repair protein mutH (Methyl-directed mismatch|
           repair protein)
          Length = 228

 Score = 29.3 bits (64), Expect = 8.0
 Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
 Frame = -3

Query: 329 GHRGGSWKAQHHLH*RRCPRDLDGWPSLQGGQQLPVAIQAQGAA---GRPQEEEEPLRRG 159
           G+ G +W + H    R+  R L  W  ++G +++P+A +  G+       QEEEE LRR 
Sbjct: 102 GNSGITWGSCHVR--RKLSRVL--WIPVEGEREIPLAKRRVGSPLLWSPNQEEEELLRRD 157

Query: 158 W 156
           W
Sbjct: 158 W 158

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>RS8_BUCAI (P57577) 30S ribosomal protein S8|
          Length = 130

 Score = 29.3 bits (64), Expect = 8.0
 Identities = 25/104 (24%), Positives = 47/104 (45%), Gaps = 14/104 (13%)
 Frame = -1

Query: 559 VSMPCTQKTKKILQLLRLRQIFNG------------VFLKV--NKATINMLRRVEPYVAY 422
           V MP ++  K I+QLL+                   VFLK    K+ ++M++R+      
Sbjct: 25  VKMPSSKLKKSIIQLLKEEGYIKDYNVTGDTKLELEVFLKYFQGKSVVDMIQRISRPSLR 84

Query: 421 GYPNLKSVRELIYKRGYGKLNKQRIPLTNNKVIEEGLGKHNIIC 290
            Y N  ++ +++   G   ++  +  +T+    +EGLG   +IC
Sbjct: 85  IYKNKNNLPKVMSGLGIAVISTSKGVMTDRMARQEGLG-GEVIC 127


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 73,605,764
Number of Sequences: 219361
Number of extensions: 1433561
Number of successful extensions: 4064
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 3948
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4043
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4643056080
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result