Clone Name | rbasd16j02 |
---|---|
Clone Library Name | barley_pub |
>dbj|AK105366.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-119-G03, full insert sequence Length = 852 Score = 214 bits (108), Expect = 3e-52 Identities = 197/226 (87%), Gaps = 3/226 (1%) Strand = Plus / Minus Query: 416 tgttgctgtagttgctgctcctgcatctgctgaggcgttagaggggtcctcggagggaac 475 |||||||| || |||||||||||||||||||| ||||||||||||||||| || |||||| Sbjct: 458 tgttgctgcagctgctgctcctgcatctgctggggcgttagaggggtcctgggggggaac 399 Query: 476 attggcacctgtgacatgtaatgccctgc---ccctggggatgcagcaggtggtgccatc 532 ||||||||||| |||||||| ||||| | ||| || |||||| || | || ||||| Sbjct: 398 attggcacctgcgacatgtattgcccccctaaccccggcgatgcaccatgcggcaccatc 339 Query: 533 tgaggacggcttacagaggtctgtggctgagtatcagcaatcgcagccaaatacaaaaga 592 || |||||||||| || |||||| || |||||||||||||| |||||||| ||||| ||| Sbjct: 338 tggggacggcttatagtggtctgcggttgagtatcagcaattgcagccaagtacaagaga 279 Query: 593 ttcttctgaagctgagcttgatactgagcacattccgccaactttc 638 |||||||||||||| |||||||||||||||||||| |||||||||| Sbjct: 278 ttcttctgaagctgcgcttgatactgagcacattctgccaactttc 233 Score = 54.0 bits (27), Expect = 6e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 118 atcacggccacttatcattcaagggcacaggaatgatcc 156 |||||||||||| | | |||||||||||||||||||||| Sbjct: 771 atcacggccactcaccgttcaagggcacaggaatgatcc 733 Score = 42.1 bits (21), Expect = 2.2 Identities = 39/45 (86%) Strand = Plus / Minus Query: 240 cgctcccaccatcgttatcggcgccagtgctcctgtggctctcgg 284 |||| ||||| || || |||| ||| ||||||||||||||||||| Sbjct: 640 cgcttccaccgtcattttcggtgccggtgctcctgtggctctcgg 596
>gb|AY106697.1| Zea mays PCO074690 mRNA sequence Length = 714 Score = 170 bits (86), Expect = 4e-39 Identities = 200/238 (84%) Strand = Plus / Minus Query: 401 agcatctgagcctgttgttgctgtagttgctgctcctgcatctgctgaggcgttagaggg 460 |||| ||||||||| || ||||| || |||||||||||||||||||| || || ||||| Sbjct: 462 agcaactgagcctgctgctgctgaagctgctgctcctgcatctgctggggtgtaagaggt 403 Query: 461 gtcctcggagggaacattggcacctgtgacatgtaatgccctgcccctggggatgcagca 520 |||||||| |||||||| ||||||||||||||||| |||||| | || || ||| || || Sbjct: 402 gtcctcggtgggaacataggcacctgtgacatgtactgccctactccaggcgatccacca 343 Query: 521 ggtggtgccatctgaggacggcttacagaggtctgtggctgagtatcagcaatcgcagcc 580 || || ||||||||||| |||||||||| ||||| || |||| ||| || || ||||| Sbjct: 342 ggcggcgccatctgagggcggcttacagcagtctgcggttgagcatctgcgattgcagcg 283 Query: 581 aaatacaaaagattcttctgaagctgagcttgatactgagcacattccgccaactttc 638 | |||||| || ||||||||||| || | |||||||||||||||||| ||||| |||| Sbjct: 282 agatacaagaggttcttctgaagttgtgattgatactgagcacattctgccaattttc 225 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 263 ccagtgctcctgtggctctcggtgccagaaggctc 297 |||||||||||||||||||||||||| || ||||| Sbjct: 612 ccagtgctcctgtggctctcggtgcccgagggctc 578
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 416 tgttgctgtagttgctgctcctgcatctgctgaggcgttagaggggtcctcggagggaac 475 |||||||| || |||||||||||||||||||| ||||||||||||||||| || |||||| Sbjct: 18897151 tgttgctgcagctgctgctcctgcatctgctggggcgttagaggggtcctgggggggaac 18897210 Query: 476 attggcacctgtgacatgtaatgccc 501 ||||||||||| |||||||| ||||| Sbjct: 18897211 attggcacctgcgacatgtattgccc 18897236 Score = 97.6 bits (49), Expect = 4e-17 Identities = 73/81 (90%) Strand = Plus / Plus Query: 536 ggacggcttacagaggtctgtggctgagtatcagcaatcgcagccaaatacaaaagattc 595 |||||||||| || |||||| || |||||||||||||| |||||||| ||||| |||||| Sbjct: 18897344 ggacggcttatagtggtctgcggttgagtatcagcaattgcagccaagtacaagagattc 18897403 Query: 596 ttctgaagctgagcttgatac 616 ||||||||||| ||||||||| Sbjct: 18897404 ttctgaagctgcgcttgatac 18897424 Score = 54.0 bits (27), Expect = 6e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 118 atcacggccacttatcattcaagggcacaggaatgatcc 156 |||||||||||| | | |||||||||||||||||||||| Sbjct: 18896838 atcacggccactcaccgttcaagggcacaggaatgatcc 18896876 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Plus Query: 613 atactgagcacattccgccaactttc 638 ||||||||||||||| |||||||||| Sbjct: 18899557 atactgagcacattctgccaactttc 18899582 Score = 42.1 bits (21), Expect = 2.2 Identities = 39/45 (86%) Strand = Plus / Plus Query: 240 cgctcccaccatcgttatcggcgccagtgctcctgtggctctcgg 284 |||| ||||| || || |||| ||| ||||||||||||||||||| Sbjct: 18896969 cgcttccaccgtcattttcggtgccggtgctcctgtggctctcgg 18897013
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 416 tgttgctgtagttgctgctcctgcatctgctgaggcgttagaggggtcctcggagggaac 475 |||||||| || |||||||||||||||||||| ||||||||||||||||| || |||||| Sbjct: 18823378 tgttgctgcagctgctgctcctgcatctgctggggcgttagaggggtcctgggggggaac 18823437 Query: 476 attggcacctgtgacatgtaatgccc 501 ||||||||||| |||||||| ||||| Sbjct: 18823438 attggcacctgcgacatgtattgccc 18823463 Score = 97.6 bits (49), Expect = 4e-17 Identities = 73/81 (90%) Strand = Plus / Plus Query: 536 ggacggcttacagaggtctgtggctgagtatcagcaatcgcagccaaatacaaaagattc 595 |||||||||| || |||||| || |||||||||||||| |||||||| ||||| |||||| Sbjct: 18823571 ggacggcttatagtggtctgcggttgagtatcagcaattgcagccaagtacaagagattc 18823630 Query: 596 ttctgaagctgagcttgatac 616 ||||||||||| ||||||||| Sbjct: 18823631 ttctgaagctgcgcttgatac 18823651 Score = 54.0 bits (27), Expect = 6e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 118 atcacggccacttatcattcaagggcacaggaatgatcc 156 |||||||||||| | | |||||||||||||||||||||| Sbjct: 18823065 atcacggccactcaccgttcaagggcacaggaatgatcc 18823103 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Plus Query: 613 atactgagcacattccgccaactttc 638 ||||||||||||||| |||||||||| Sbjct: 18825784 atactgagcacattctgccaactttc 18825809 Score = 42.1 bits (21), Expect = 2.2 Identities = 39/45 (86%) Strand = Plus / Plus Query: 240 cgctcccaccatcgttatcggcgccagtgctcctgtggctctcgg 284 |||| ||||| || || |||| ||| ||||||||||||||||||| Sbjct: 18823196 cgcttccaccgtcattttcggtgccggtgctcctgtggctctcgg 18823240
>emb|AL831808.4|CNS08CAL Oryza sativa chromosome 12, . BAC OSJNBa0028H02 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 153064 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Minus Query: 416 tgttgctgtagttgctgctcctgcatctgctgaggcgttagaggggtcctcggagggaac 475 |||||||| || |||||||||||||||||||| ||||||||||||||||| || |||||| Sbjct: 73228 tgttgctgcagctgctgctcctgcatctgctggggcgttagaggggtcctgggggggaac 73169 Query: 476 attggcacctgtgacatgtaatgccc 501 ||||||||||| |||||||| ||||| Sbjct: 73168 attggcacctgcgacatgtattgccc 73143 Score = 97.6 bits (49), Expect = 4e-17 Identities = 73/81 (90%) Strand = Plus / Minus Query: 536 ggacggcttacagaggtctgtggctgagtatcagcaatcgcagccaaatacaaaagattc 595 |||||||||| || |||||| || |||||||||||||| |||||||| ||||| |||||| Sbjct: 73035 ggacggcttatagtggtctgcggttgagtatcagcaattgcagccaagtacaagagattc 72976 Query: 596 ttctgaagctgagcttgatac 616 ||||||||||| ||||||||| Sbjct: 72975 ttctgaagctgcgcttgatac 72955 Score = 54.0 bits (27), Expect = 6e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 118 atcacggccacttatcattcaagggcacaggaatgatcc 156 |||||||||||| | | |||||||||||||||||||||| Sbjct: 73541 atcacggccactcaccgttcaagggcacaggaatgatcc 73503 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Minus Query: 613 atactgagcacattccgccaactttc 638 ||||||||||||||| |||||||||| Sbjct: 70822 atactgagcacattctgccaactttc 70797 Score = 42.1 bits (21), Expect = 2.2 Identities = 39/45 (86%) Strand = Plus / Minus Query: 240 cgctcccaccatcgttatcggcgccagtgctcctgtggctctcgg 284 |||| ||||| || || |||| ||| ||||||||||||||||||| Sbjct: 73410 cgcttccaccgtcattttcggtgccggtgctcctgtggctctcgg 73366
>gb|AY105610.1| Zea mays PCO132612 mRNA sequence Length = 686 Score = 85.7 bits (43), Expect = 2e-13 Identities = 73/83 (87%) Strand = Plus / Minus Query: 428 tgctgctcctgcatctgctgaggcgttagaggggtcctcggagggaacattggcacctgt 487 |||||||||||||||||||| || |||| ||||| || |||||||||||||| || ||| Sbjct: 163 tgctgctcctgcatctgctgtggggttaatggggttcttggagggaacattggtacttgt 104 Query: 488 gacatgtaatgccctgcccctgg 510 |||||||||||||| || ||||| Sbjct: 103 gacatgtaatgccccgcacctgg 81
>gb|AC120885.3| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0042J05, complete sequence Length = 150295 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 569 gcaatcgcagccaaatacaaaagattcttctgaagctgagcttg 612 ||||| ||||||| |||||| |||||||| |||||||||||||| Sbjct: 76529 gcaatggcagccagatacaagagattcttttgaagctgagcttg 76572 Score = 50.1 bits (25), Expect = 0.009 Identities = 70/85 (82%) Strand = Plus / Plus Query: 428 tgctgctcctgcatctgctgaggcgttagaggggtcctcggagggaacattggcacctgt 487 |||||||| |||||||| || || |||| || || || ||||||||||| || || || Sbjct: 76299 tgctgctcttgcatctgttgtggggttaagggagttcttggagggaacatcggtacttgg 76358 Query: 488 gacatgtaatgccctgcccctgggg 512 |||||||||||||| || ||||||| Sbjct: 76359 gacatgtaatgcccagcacctgggg 76383
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 569 gcaatcgcagccaaatacaaaagattcttctgaagctgagcttg 612 ||||| ||||||| |||||| |||||||| |||||||||||||| Sbjct: 23060526 gcaatggcagccagatacaagagattcttttgaagctgagcttg 23060569 Score = 50.1 bits (25), Expect = 0.009 Identities = 70/85 (82%) Strand = Plus / Plus Query: 428 tgctgctcctgcatctgctgaggcgttagaggggtcctcggagggaacattggcacctgt 487 |||||||| |||||||| || || |||| || || || ||||||||||| || || || Sbjct: 23060296 tgctgctcttgcatctgttgtggggttaagggagttcttggagggaacatcggtacttgg 23060355 Query: 488 gacatgtaatgccctgcccctgggg 512 |||||||||||||| || ||||||| Sbjct: 23060356 gacatgtaatgcccagcacctgggg 23060380
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 569 gcaatcgcagccaaatacaaaagattcttctgaagctgagcttg 612 ||||| ||||||| |||||| |||||||| |||||||||||||| Sbjct: 23370436 gcaatggcagccagatacaagagattcttttgaagctgagcttg 23370479 Score = 50.1 bits (25), Expect = 0.009 Identities = 70/85 (82%) Strand = Plus / Plus Query: 428 tgctgctcctgcatctgctgaggcgttagaggggtcctcggagggaacattggcacctgt 487 |||||||| |||||||| || || |||| || || || ||||||||||| || || || Sbjct: 23370206 tgctgctcttgcatctgttgtggggttaagggagttcttggagggaacatcggtacttgg 23370265 Query: 488 gacatgtaatgccctgcccctgggg 512 |||||||||||||| || ||||||| Sbjct: 23370266 gacatgtaatgcccagcacctgggg 23370290
>gb|AC185537.1| Drosophila melanogaster clone BACR39I01, complete sequence Length = 161147 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 412 ctgttgttgctgtagttgctgctcctgca 440 ||||||||||||| ||||||||||||||| Sbjct: 6393 ctgttgttgctgttgttgctgctcctgca 6365
>ref|NM_167688.1| Drosophila melanogaster CG32529-RC, transcript variant C (CG32529), mRNA Length = 5828 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 412 ctgttgttgctgtagttgctgctcctgca 440 ||||||||||||| ||||||||||||||| Sbjct: 1551 ctgttgttgctgttgttgctgctcctgca 1523
>ref|NM_134516.2| Drosophila melanogaster CG32529-RA, transcript variant A (CG32529), mRNA Length = 9319 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 412 ctgttgttgctgtagttgctgctcctgca 440 ||||||||||||| ||||||||||||||| Sbjct: 5042 ctgttgttgctgttgttgctgctcctgca 5014
>ref|NM_001038766.1| Drosophila melanogaster CG32529-RD, transcript variant D (CG32529), mRNA Length = 6581 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 412 ctgttgttgctgtagttgctgctcctgca 440 ||||||||||||| ||||||||||||||| Sbjct: 2304 ctgttgttgctgttgttgctgctcctgca 2276
>gb|AY058379.1| Drosophila melanogaster GH14389 full length cDNA Length = 5043 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 412 ctgttgttgctgtagttgctgctcctgca 440 ||||||||||||| ||||||||||||||| Sbjct: 743 ctgttgttgctgttgttgctgctcctgca 715
>gb|BT004503.1| Drosophila melanogaster GH07949 full insert cDNA Length = 7213 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 412 ctgttgttgctgtagttgctgctcctgca 440 ||||||||||||| ||||||||||||||| Sbjct: 4060 ctgttgttgctgttgttgctgctcctgca 4032
>gb|BT021370.1| Drosophila melanogaster LP07893 full insert cDNA Length = 3133 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 412 ctgttgttgctgtagttgctgctcctgca 440 ||||||||||||| ||||||||||||||| Sbjct: 2304 ctgttgttgctgttgttgctgctcctgca 2276
>gb|AE003513.3| Drosophila melanogaster chromosome X, section 65 of 74 of the complete sequence Length = 207432 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 412 ctgttgttgctgtagttgctgctcctgca 440 ||||||||||||| ||||||||||||||| Sbjct: 202721 ctgttgttgctgttgttgctgctcctgca 202693
>ref|NM_116311.2| Arabidopsis thaliana GIF3 (GRF1-INTERACTING FACTOR 3) AT4G00850 (GIF3) mRNA, complete cds Length = 1045 Score = 48.1 bits (24), Expect = 0.036 Identities = 33/36 (91%) Strand = Plus / Minus Query: 592 attcttctgaagctgagcttgatactgagcacattc 627 ||||||||| || |||||||||||||||||||||| Sbjct: 293 attcttctggagaagagcttgatactgagcacattc 258
>gb|AY102641.1| Arabidopsis thaliana GRF1-interacting factor 3 (GIF3) mRNA, complete cds Length = 1041 Score = 48.1 bits (24), Expect = 0.036 Identities = 33/36 (91%) Strand = Plus / Minus Query: 592 attcttctgaagctgagcttgatactgagcacattc 627 ||||||||| || |||||||||||||||||||||| Sbjct: 293 attcttctggagaagagcttgatactgagcacattc 258
>gb|AY052732.1| Arabidopsis thaliana AT4g00850/A_TM018A10_22 mRNA, complete cds Length = 672 Score = 48.1 bits (24), Expect = 0.036 Identities = 33/36 (91%) Strand = Plus / Minus Query: 592 attcttctgaagctgagcttgatactgagcacattc 627 ||||||||| || |||||||||||||||||||||| Sbjct: 186 attcttctggagaagagcttgatactgagcacattc 151
>gb|AF378866.1|AF378866 Arabidopsis thaliana AT4g00850/A_TM018A10_22 mRNA, complete cds Length = 1006 Score = 48.1 bits (24), Expect = 0.036 Identities = 33/36 (91%) Strand = Plus / Minus Query: 592 attcttctgaagctgagcttgatactgagcacattc 627 ||||||||| || |||||||||||||||||||||| Sbjct: 254 attcttctggagaagagcttgatactgagcacattc 219
>ref|XM_652665.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN0153.2), mRNA Length = 2559 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 406 ctgagcctgttgttgctgtagttgctg 432 ||||||||||||||||||| ||||||| Sbjct: 1644 ctgagcctgttgttgctgttgttgctg 1618
>gb|AY146588.1| Triticum monococcum BAC clone 453N11, complete sequence Length = 285444 Score = 44.1 bits (22), Expect = 0.56 Identities = 28/30 (93%) Strand = Plus / Plus Query: 405 tctgagcctgttgttgctgtagttgctgct 434 |||||||||||||||| ||| ||||||||| Sbjct: 213590 tctgagcctgttgttgttgttgttgctgct 213619 Score = 44.1 bits (22), Expect = 0.56 Identities = 28/30 (93%) Strand = Plus / Plus Query: 405 tctgagcctgttgttgctgtagttgctgct 434 |||||||||||||||| ||| ||||||||| Sbjct: 61197 tctgagcctgttgttgttgttgttgctgct 61226
>gb|DQ345449.1| Triticum monococcum low molecular weight glutenin subunit LMW-M5 (LMW-M5) gene, complete cds Length = 1646 Score = 44.1 bits (22), Expect = 0.56 Identities = 28/30 (93%) Strand = Plus / Minus Query: 405 tctgagcctgttgttgctgtagttgctgct 434 |||||||||||||||| ||| ||||||||| Sbjct: 1176 tctgagcctgttgttgttgttgttgctgct 1147
>gb|DQ307389.1| Triticum monococcum low molecular weight glutenin subunit LMW-M3 (LMW-M3) gene, complete cds Length = 1638 Score = 44.1 bits (22), Expect = 0.56 Identities = 28/30 (93%) Strand = Plus / Minus Query: 405 tctgagcctgttgttgctgtagttgctgct 434 |||||||||||||||| ||| ||||||||| Sbjct: 1167 tctgagcctgttgttgttgttgttgctgct 1138
>gb|DQ307382.1| Triticum turgidum LMW glutenin subunit LMW-Y21 pseudogene, complete sequence Length = 1062 Score = 44.1 bits (22), Expect = 0.56 Identities = 28/30 (93%) Strand = Plus / Minus Query: 405 tctgagcctgttgttgctgtagttgctgct 434 |||||||||||||||| ||| ||||||||| Sbjct: 790 tctgagcctgttgttgttgttgttgctgct 761
>gb|DQ307380.1| Triticum turgidum LMW glutenin subunit LMW-E177 pseudogene, complete sequence Length = 1062 Score = 44.1 bits (22), Expect = 0.56 Identities = 28/30 (93%) Strand = Plus / Minus Query: 405 tctgagcctgttgttgctgtagttgctgct 434 |||||||||||||||| ||| ||||||||| Sbjct: 790 tctgagcctgttgttgttgttgttgctgct 761
>gb|DQ234068.1| Triticum monococcum low molecular weight glutenin gene, complete cds Length = 1041 Score = 44.1 bits (22), Expect = 0.56 Identities = 28/30 (93%) Strand = Plus / Minus Query: 405 tctgagcctgttgttgctgtagttgctgct 434 |||||||||||||||| ||| ||||||||| Sbjct: 766 tctgagcctgttgttgttgttgttgctgct 737
>ref|XM_638699.1| Dictyostelium discoideum putative LISK family protein kinase (DDB0229851), partial mRNA Length = 2766 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 413 tgttgttgctgtagttgctgc 433 ||||||||||||||||||||| Sbjct: 2268 tgttgttgctgtagttgctgc 2248
>gb|AE017334.2| Bacillus anthracis str. 'Ames Ancestor', complete genome Length = 5227419 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 399 gaagcatctgagcctgttgtt 419 ||||||||||||||||||||| Sbjct: 451389 gaagcatctgagcctgttgtt 451409
>gb|AE017225.1| Bacillus anthracis str. Sterne, complete genome Length = 5228663 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 399 gaagcatctgagcctgttgtt 419 ||||||||||||||||||||| Sbjct: 451432 gaagcatctgagcctgttgtt 451452
>ref|XM_456279.1| Kluyveromyces lactis NRRL Y-1140, KLLA0F26961g predicted mRNA Length = 2085 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 406 ctgagcctgttgttgctgtagttgc 430 ||||||||||||||||||| ||||| Sbjct: 1080 ctgagcctgttgttgctgttgttgc 1056
>emb|CR942808.9| Drosophila DNA sequence from clone BACR-5J11, complete sequence Length = 196868 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 413 tgttgttgctgtagttgctgc 433 ||||||||||||||||||||| Sbjct: 59188 tgttgttgctgtagttgctgc 59168
>emb|CR942807.3| Drosophila DNA sequence from clone BACR-12I02, complete sequence Length = 177921 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 413 tgttgttgctgtagttgctgc 433 ||||||||||||||||||||| Sbjct: 8671 tgttgttgctgtagttgctgc 8651
>ref|XM_849206.1| PREDICTED: Canis familiaris similar to trinucleotide repeat containing 9 (LOC611527), mRNA Length = 753 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 419 tgctgtagttgctgctcctgcatctgctg 447 ||||| |||||||||| |||||||||||| Sbjct: 431 tgctgcagttgctgctgctgcatctgctg 403
>emb|CR376855.11| Zebrafish DNA sequence from clone DKEY-56N2 in linkage group 25, complete sequence Length = 219164 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 129 ttatcattcaagggcacagga 149 ||||||||||||||||||||| Sbjct: 55837 ttatcattcaagggcacagga 55817
>ref|XM_500498.1| Yarrowia lipolytica CLIB122, YALI0B04510g predicted mRNA Length = 990 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Minus Query: 415 ttgttgctgtagttgctgctcctgcatctgctg 447 |||||||||| ||||||||| ||||||||||| Sbjct: 729 ttgttgctgttgttgctgctggtgcatctgctg 697
>gb|AY044900.1| Aplysia californica soluble guanylate cyclase subunit mRNA, complete cds Length = 2660 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 412 ctgttgttgctgtagttgctg 432 ||||||||||||||||||||| Sbjct: 405 ctgttgttgctgtagttgctg 385
>emb|CR382126.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-1140 of Kluyveromyces lactis Length = 2602197 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 406 ctgagcctgttgttgctgtagttgc 430 ||||||||||||||||||| ||||| Sbjct: 2487883 ctgagcctgttgttgctgttgttgc 2487859 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 412 ctgttgttgctgtagttgctgctcctgc 439 ||||||||||||| ||||||||| |||| Sbjct: 2474949 ctgttgttgctgttgttgctgctgctgc 2474976
>gb|AC008310.5|AC008310 Drosophila melanogaster, chromosome 3R, region 100C-100D, BAC clone BACR16C04, complete sequence Length = 159528 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 422 tgtagttgctgctcctgcatctgct 446 |||||||||||||||||| |||||| Sbjct: 53232 tgtagttgctgctcctgcttctgct 53208
>gb|AC007469.7|AC007469 Drosophila melanogaster, chromosome 3R, region 100D1-100F2, BAC clone BACR48C22, complete sequence Length = 181446 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 422 tgtagttgctgctcctgcatctgct 446 |||||||||||||||||| |||||| Sbjct: 2867 tgtagttgctgctcctgcttctgct 2843
>gb|AC116305.2| Dictyostelium discoideum chromosome 2 map 1005175-1418323 strain AX4, complete sequence Length = 413138 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 413 tgttgttgctgtagttgctgc 433 ||||||||||||||||||||| Sbjct: 204789 tgttgttgctgtagttgctgc 204769
>gb|AY110360.1| Zea mays CL2011_1 mRNA sequence Length = 3324 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 512 gatgcagcaggtggtgccatc 532 ||||||||||||||||||||| Sbjct: 846 gatgcagcaggtggtgccatc 866
>gb|AE003779.2| Drosophila melanogaster chromosome 3R, section 117 of 118 of the complete sequence Length = 232050 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 422 tgtagttgctgctcctgcatctgct 446 |||||||||||||||||| |||||| Sbjct: 42139 tgtagttgctgctcctgcttctgct 42115
>gb|AE016879.1| Bacillus anthracis str. Ames, complete genome Length = 5227293 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 399 gaagcatctgagcctgttgtt 419 ||||||||||||||||||||| Sbjct: 451389 gaagcatctgagcctgttgtt 451409
>emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB122 of Yarrowia lipolytica Length = 3066374 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 415 ttgttgctgtagttgctgctcctgcatctgctg 447 |||||||||| ||||||||| ||||||||||| Sbjct: 606690 ttgttgctgttgttgctgctggtgcatctgctg 606722
>gb|U67422.1|ZMU67422 Zea mays CRINKLY4 precursor (cr4) mRNA, complete cds Length = 3346 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 512 gatgcagcaggtggtgccatc 532 ||||||||||||||||||||| Sbjct: 846 gatgcagcaggtggtgccatc 866
>gb|AY854822.1| Drosophila virilis strain A11 embryonic lethal abnormal vision protein (elav) gene, partial cds Length = 1039 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 412 ctgttgttgctgtagttgctgctcctgc 439 ||||||||||||| ||||||||| |||| Sbjct: 209 ctgttgttgctgttgttgctgctgctgc 182
>ref|XM_641576.1| Dictyostelium discoideum hypothetical protein (DDB0190931), partial mRNA Length = 381 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 aagcataacagctactactc 98 |||||||||||||||||||| Sbjct: 352 aagcataacagctactactc 333
>ref|XM_640460.1| Dictyostelium discoideum hypothetical protein (DDB0216864), partial mRNA Length = 3639 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 413 tgttgttgctgtagttgctg 432 |||||||||||||||||||| Sbjct: 3383 tgttgttgctgtagttgctg 3364
>ref|XM_638819.1| Dictyostelium discoideum hypothetical protein (DDB0167902), partial mRNA Length = 2130 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 413 tgttgttgctgtagttgctg 432 |||||||||||||||||||| Sbjct: 531 tgttgttgctgtagttgctg 512
>ref|XM_635128.1| Dictyostelium discoideum hypothetical protein (DDB0216408), partial mRNA Length = 4086 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 413 tgttgttgctgtagttgctg 432 |||||||||||||||||||| Sbjct: 2216 tgttgttgctgtagttgctg 2197
>ref|XM_629057.1| Dictyostelium discoideum hypothetical protein (DDB0192055), partial mRNA Length = 4926 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 413 tgttgttgctgtagttgctg 432 |||||||||||||||||||| Sbjct: 3371 tgttgttgctgtagttgctg 3352
>gb|AF042094.1| Lycopersicon esculentum CTG repeat region sequence Length = 443 Score = 40.1 bits (20), Expect = 8.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 413 tgttgttgctgtagttgctgctcctgcatctg 444 ||||||||||| | |||||||| ||||||||| Sbjct: 252 tgttgttgctgcatttgctgctgctgcatctg 283
>gb|AF453312.1| Cotesia congregata clone Cco1 microsatellite sequence Length = 656 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 412 ctgttgttgctgtagttgctgctcctgc 439 ||||||||||||| ||||||||| |||| Sbjct: 531 ctgttgttgctgttgttgctgctgctgc 504
>gb|AC096997.3| Takifugu rubripes clone 217A23, complete sequence Length = 74841 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 412 ctgttgttgctgtagttgctgctcctgc 439 ||||||||||||| ||||||||| |||| Sbjct: 72212 ctgttgttgctgttgttgctgctgctgc 72239
>gb|AY578805.1| Anopheles gambiae medea gene, complete cds Length = 2979 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 412 ctgttgttgctgtagttgctgctcctgc 439 ||||||||||||| ||||||||| |||| Sbjct: 1745 ctgttgttgctgttgttgctgctgctgc 1718
>gb|AC009844.7| Drosophila melanogaster clone BACR01L16, complete sequence Length = 168238 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 415 ttgttgctgtagttgctgctcctg 438 |||||||||| ||||||||||||| Sbjct: 133509 ttgttgctgttgttgctgctcctg 133532
>gb|AC007852.9| Drosophila melanogaster clone BACR33A10, complete sequence Length = 186333 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 447 gaggcgttagaggggtcctc 466 |||||||||||||||||||| Sbjct: 103837 gaggcgttagaggggtcctc 103818
>ref|XM_361336.1| Magnaporthe grisea 70-15 hypothetical protein (MG03810.4) partial mRNA Length = 12735 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 412 ctgttgttgctgtagttgctgctcctgc 439 ||||||||||||| ||||||||| |||| Sbjct: 7980 ctgttgttgctgttgttgctgctgctgc 7953
>ref|XM_415235.1| PREDICTED: Gallus gallus similar to LOC398566 protein (LOC416941), mRNA Length = 2652 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 411 cctgttgttgctgtagttgctgct 434 |||||||||||||| ||||||||| Sbjct: 754 cctgttgttgctgttgttgctgct 731
>ref|XM_323019.1| Neurospora crassa OR74A hypothetical protein (NCU03718.1) partial mRNA Length = 849 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 413 tgttgttgctgtagttgctgctcc 436 |||||||||||| ||||||||||| Sbjct: 380 tgttgttgctgttgttgctgctcc 357
>ref|XM_956401.1| Neurospora crassa OR74A hypothetical protein (NCU03718.1) partial mRNA Length = 849 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 413 tgttgttgctgtagttgctgctcc 436 |||||||||||| ||||||||||| Sbjct: 380 tgttgttgctgttgttgctgctcc 357
>ref|NM_144529.1| Mus musculus Rho GTPase activating protein 17 (Arhgap17), mRNA Length = 3394 Score = 40.1 bits (20), Expect = 8.7 Identities = 35/40 (87%) Strand = Plus / Minus Query: 413 tgttgttgctgtagttgctgctcctgcatctgctgaggcg 452 ||||| |||||| ||||||||| |||| ||||||||||| Sbjct: 2161 tgttgctgctgttgttgctgctgctgctgctgctgaggcg 2122
>ref|XM_456272.1| Kluyveromyces lactis NRRL Y-1140, KLLA0F26807g predicted mRNA Length = 711 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 412 ctgttgttgctgtagttgctgctcctgc 439 ||||||||||||| ||||||||| |||| Sbjct: 504 ctgttgttgctgttgttgctgctgctgc 477
>gb|AY575774.1| Pseudomonas aeruginosa bacteriophage PaP2, complete genome Length = 43783 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 405 tctgagcctgttgttgctgtagttgctg 432 ||||||||||||||||||| ||||||| Sbjct: 7799 tctgagcctgttgttgctgctgttgctg 7772
>gb|AC125291.3| Drosophila melanogaster X BAC CH221-17A11 (CHORI Sheared BAC Drosophila melanogaster library) complete sequence Length = 166613 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 412 ctgttgttgctgtagttgctgctcctgc 439 ||||||||||||| ||||||||| |||| Sbjct: 67567 ctgttgttgctgttgttgctgctgctgc 67594
>ref|XM_980810.1| PREDICTED: Mus musculus DNA segment, Chr 6, ERATO Doi 527, expressed (D6Ertd527e), mRNA Length = 2225 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 405 tctgagcctgttgttgctgtagttgctg 432 |||||| ||| ||||||||||||||||| Sbjct: 828 tctgaggctgctgttgctgtagttgctg 801
>ref|XM_489144.3| PREDICTED: Mus musculus DNA segment, Chr 6, ERATO Doi 527, expressed (D6Ertd527e), mRNA Length = 2225 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 405 tctgagcctgttgttgctgtagttgctg 432 |||||| ||| ||||||||||||||||| Sbjct: 828 tctgaggctgctgttgctgtagttgctg 801
>ref|XM_923606.2| PREDICTED: Mus musculus DNA segment, Chr 6, ERATO Doi 527, expressed (D6Ertd527e), mRNA Length = 2225 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 405 tctgagcctgttgttgctgtagttgctg 432 |||||| ||| ||||||||||||||||| Sbjct: 828 tctgaggctgctgttgctgtagttgctg 801
>ref|XM_543684.2| PREDICTED: Canis familiaris similar to Myeloid/lymphoid or mixed-lineage leukemia protein 2 (ALL1-related protein) (LOC486558), mRNA Length = 18674 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 416 tgttgctgtagttgctgctcctgc 439 ||||||||||||||||||| |||| Sbjct: 11075 tgttgctgtagttgctgctgctgc 11052
>emb|CR936849.22| Mouse DNA sequence from clone DN-250A21 on chromosome 3, complete sequence Length = 153083 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 412 ctgttgttgctgtagttgctgctcctgc 439 ||||||||||||| ||||||||| |||| Sbjct: 123985 ctgttgttgctgttgttgctgctgctgc 124012 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 412 ctgttgttgctgtagttgctgctcctgc 439 ||||||||||||| ||||||||| |||| Sbjct: 123772 ctgttgttgctgttgttgctgctgctgc 123799
>ref|XM_537741.2| PREDICTED: Canis familiaris similar to Vitronectin precursor (Serum spreading factor) (S-protein) (V75), transcript variant 1 (LOC480621), mRNA Length = 1529 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 340 aggggcctggggaatgccat 359 |||||||||||||||||||| Sbjct: 94 aggggcctggggaatgccat 75
>ref|XM_863046.1| PREDICTED: Canis familiaris similar to Vitronectin precursor (Serum spreading factor) (S-protein) (V75), transcript variant 3 (LOC480621), mRNA Length = 1531 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 340 aggggcctggggaatgccat 359 |||||||||||||||||||| Sbjct: 94 aggggcctggggaatgccat 75
>ref|XM_848947.1| PREDICTED: Canis familiaris similar to Vitronectin precursor (Serum spreading factor) (S-protein) (V75), transcript variant 2 (LOC480621), mRNA Length = 1564 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 340 aggggcctggggaatgccat 359 |||||||||||||||||||| Sbjct: 94 aggggcctggggaatgccat 75
>gb|AC121956.3| Mus musculus BAC clone RP24-225I19 from chromosome 7, complete sequence Length = 191330 Score = 40.1 bits (20), Expect = 8.7 Identities = 35/40 (87%) Strand = Plus / Minus Query: 413 tgttgttgctgtagttgctgctcctgcatctgctgaggcg 452 ||||| |||||| ||||||||| |||| ||||||||||| Sbjct: 164868 tgttgctgctgttgttgctgctgctgctgctgctgaggcg 164829
>gb|AC006357.5| Homo sapiens PAC clone RP5-1121A15 from 7, complete sequence Length = 130492 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 428 tgctgctcctgcatctgctg 447 |||||||||||||||||||| Sbjct: 41390 tgctgctcctgcatctgctg 41371
>gb|AC146555.5| Medicago truncatula clone mth2-10p14, complete sequence Length = 127640 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 tactactcttcatcatccac 110 |||||||||||||||||||| Sbjct: 99640 tactactcttcatcatccac 99621
>gb|AC138364.8| Mus musculus chromosome 7, clone RP23-243D10, complete sequence Length = 199717 Score = 40.1 bits (20), Expect = 8.7 Identities = 35/40 (87%) Strand = Plus / Minus Query: 413 tgttgttgctgtagttgctgctcctgcatctgctgaggcg 452 ||||| |||||| ||||||||| |||| ||||||||||| Sbjct: 41964 tgttgctgctgttgttgctgctgctgctgctgctgaggcg 41925
>emb|Z98742.5|HS128O3 Human DNA sequence from clone RP1-128O3 on chromosome 6q21-22 Contains the 5' end of the SNX3 gene for sorting nexin 3, a pseudogene similar to hypothetical protein HSPC016, a novel gene, and the 5' end of the LACE1 gene for lactation elevated 1 a ribosomal protein L36a pseudogene (RPL36A) and four CpG islands, complete sequence Length = 119350 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 acttgaggggcctggggaat 354 |||||||||||||||||||| Sbjct: 32579 acttgaggggcctggggaat 32560
>emb|AL596276.6| Human DNA sequence from clone RP11-115A15 on chromosome 1 Contains a heterogeneous nuclear ribonucleoprotein A1 (HNRPA1) pseudogene, a ubiquitin-conjugating enzyme E2 variant 1 (UBE2V1) pseudogene and a cytochrome c oxidase subunit V1a polypeptide 1 (COX6A1) pseudogene, complete sequence Length = 129398 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 416 tgttgctgtagttgctgctc 435 |||||||||||||||||||| Sbjct: 109331 tgttgctgtagttgctgctc 109350
>emb|AL133354.14| Human DNA sequence from clone RP4-599I11 on chromosome 20 Contains the RASSF2 gene for Ras association (RalGDS/AF-6) domain family 2 and a CpG island, complete sequence Length = 59726 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 263 ccagtgctcctgtggctctc 282 |||||||||||||||||||| Sbjct: 34820 ccagtgctcctgtggctctc 34839
>ref|XM_780957.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein LOC580929 (LOC580929), mRNA Length = 5619 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 412 ctgttgttgctgtagttgctgctcctgc 439 ||||||||||||| ||||||||| |||| Sbjct: 4149 ctgttgttgctgttgttgctgctgctgc 4122
>emb|AL445063.1|TACID1 Thermoplasma acidophilum complete genome; segment 1/5 Length = 344000 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 276 ggctctcggtgccagaaggctcgg 299 ||||||||||| |||||||||||| Sbjct: 321814 ggctctcggtggcagaaggctcgg 321837
>gb|AF451898.1| Heliothis zea virus 1, complete genome Length = 228089 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 406 ctgagcctgttgttgctgtagttg 429 ||||||||||||||||||| |||| Sbjct: 185660 ctgagcctgttgttgctgttgttg 185637
>emb|BX255938.7| Mouse DNA sequence from clone RP23-333B5 on chromosome 11 Contains part of a novel gene, complete sequence Length = 207346 Score = 40.1 bits (20), Expect = 8.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 413 tgttgttgctgtagttgctgctcctgcatctg 444 |||||||||||| ||||||||| |||| |||| Sbjct: 35619 tgttgttgctgttgttgctgctgctgcttctg 35650
>gb|AC010042.8| Drosophila melanogaster 3L BAC RP98-5K6 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 157225 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 412 ctgttgttgctgtagttgctgctcctgc 439 ||||||||||||| ||||||||| |||| Sbjct: 41615 ctgttgttgctgttgttgctgctgctgc 41588
>gb|AC023745.3| Drosophila melanogaster X BAC RP98-26N1 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 179312 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 412 ctgttgttgctgtagttgctgctcctgc 439 ||||||||||||| ||||||||| |||| Sbjct: 85284 ctgttgttgctgttgttgctgctgctgc 85257
>gb|AC023709.4| Drosophila melanogaster X BAC RP98-10I17 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 163710 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 412 ctgttgttgctgtagttgctgctcctgc 439 ||||||||||||| ||||||||| |||| Sbjct: 28871 ctgttgttgctgttgttgctgctgctgc 28898
>ref|NM_206299.1| Drosophila melanogaster Clock CG7391-RC, transcript variant C (Clk), mRNA Length = 3588 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 412 ctgttgttgctgtagttgctgctcctgc 439 ||||||||||||| ||||||||| |||| Sbjct: 2695 ctgttgttgctgttgttgctgctgctgc 2668
>ref|NM_170628.1| Drosophila melanogaster Clock CG7391-RB, transcript variant B (Clk), mRNA Length = 3576 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 412 ctgttgttgctgtagttgctgctcctgc 439 ||||||||||||| ||||||||| |||| Sbjct: 2683 ctgttgttgctgttgttgctgctgctgc 2656
>dbj|AB218789.1| Prunus mume Pm74 mRNA for NAC family protein, complete cds Length = 1295 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 412 ctgttgttgctgtagttgctgctcctgc 439 ||||||||||||| ||||||||| |||| Sbjct: 562 ctgttgttgctgttgttgctgctgctgc 535
>gb|AC162465.3| Mus musculus 6 BAC RP24-108G5 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 203546 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 405 tctgagcctgttgttgctgtagttgctg 432 |||||| ||| ||||||||||||||||| Sbjct: 60059 tctgaggctgctgttgctgtagttgctg 60032
>gb|AC003096.3| Arabidopsis thaliana chromosome 2 clone T29F13 map ve016, complete sequence Length = 69817 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 554 tgtggctgagtatcagcaat 573 |||||||||||||||||||| Sbjct: 7761 tgtggctgagtatcagcaat 7780
>ref|NM_135607.2| Drosophila melanogaster CG6495-RA (CG6495), mRNA Length = 2551 Score = 40.1 bits (20), Expect = 8.7 Identities = 32/36 (88%) Strand = Plus / Minus Query: 412 ctgttgttgctgtagttgctgctcctgcatctgctg 447 |||||| ||||| ||||||||| |||||||||||| Sbjct: 1277 ctgttgctgctgcggttgctgctgctgcatctgctg 1242
>ref|NM_079240.2| Drosophila melanogaster Clock CG7391-RA, transcript variant A (Clk), mRNA Length = 3684 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 412 ctgttgttgctgtagttgctgctcctgc 439 ||||||||||||| ||||||||| |||| Sbjct: 2791 ctgttgttgctgttgttgctgctgctgc 2764
>dbj|AK139701.1| Mus musculus 2 cells egg cDNA, RIKEN full-length enriched library, clone:B020011M09 product:unclassifiable, full insert sequence Length = 2176 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 405 tctgagcctgttgttgctgtagttgctg 432 |||||| ||| ||||||||||||||||| Sbjct: 829 tctgaggctgctgttgctgtagttgctg 802
>ref|NM_001014576.1| Drosophila melanogaster Clock CG7391-RD, transcript variant D (Clk), mRNA Length = 3696 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 412 ctgttgttgctgtagttgctgctcctgc 439 ||||||||||||| ||||||||| |||| Sbjct: 2803 ctgttgttgctgttgttgctgctgctgc 2776
>ref|NM_001014575.1| Drosophila melanogaster Clock CG7391-RE, transcript variant E (Clk), mRNA Length = 3694 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 412 ctgttgttgctgtagttgctgctcctgc 439 ||||||||||||| ||||||||| |||| Sbjct: 2801 ctgttgttgctgttgttgctgctgctgc 2774
>ref|NM_001014574.1| Drosophila melanogaster Clock CG7391-RF, transcript variant F (Clk), mRNA Length = 3694 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 412 ctgttgttgctgtagttgctgctcctgc 439 ||||||||||||| ||||||||| |||| Sbjct: 2801 ctgttgttgctgttgttgctgctgctgc 2774
>dbj|AK149986.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:G530113F12 product:Rho GTPase activating protein 17, full insert sequence Length = 3039 Score = 40.1 bits (20), Expect = 8.7 Identities = 35/40 (87%) Strand = Plus / Minus Query: 413 tgttgttgctgtagttgctgctcctgcatctgctgaggcg 452 ||||| |||||| ||||||||| |||| ||||||||||| Sbjct: 1901 tgttgctgctgttgttgctgctgctgctgctgctgaggcg 1862
>dbj|AK139822.1| Mus musculus 2 cells egg cDNA, RIKEN full-length enriched library, clone:B020023E12 product:unclassifiable, full insert sequence Length = 2219 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 405 tctgagcctgttgttgctgtagttgctg 432 |||||| ||| ||||||||||||||||| Sbjct: 828 tctgaggctgctgttgctgtagttgctg 801
>dbj|AK147010.1| Mus musculus 17 days embryo kidney cDNA, RIKEN full-length enriched library, clone:I920087G14 product:Rho GTPase activating protein 17, full insert sequence Length = 3332 Score = 40.1 bits (20), Expect = 8.7 Identities = 35/40 (87%) Strand = Plus / Minus Query: 413 tgttgttgctgtagttgctgctcctgcatctgctgaggcg 452 ||||| |||||| ||||||||| |||| ||||||||||| Sbjct: 2134 tgttgctgctgttgttgctgctgctgctgctgctgaggcg 2095
>gb|AC157522.2| Pan troglodytes BAC clone CH251-520I13 from chromosome unknown, complete sequence Length = 221631 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 acttgaggggcctggggaat 354 |||||||||||||||||||| Sbjct: 13627 acttgaggggcctggggaat 13608
>gb|AC091225.2| Drosophila melanogaster 3L BAC RP98-34B24 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 174774 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 412 ctgttgttgctgtagttgctgctcctgc 439 ||||||||||||| ||||||||| |||| Sbjct: 7129 ctgttgttgctgttgttgctgctgctgc 7156
>ref|XM_931481.1| PREDICTED: Homo sapiens hypothetical protein LOC643305 (LOC643305), mRNA Length = 681 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 263 ccagtgctcctgtggctctc 282 |||||||||||||||||||| Sbjct: 8 ccagtgctcctgtggctctc 27
>dbj|AK152301.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830059F06 product:Nadrin1 homolog [Mus musculus], full insert sequence Length = 3373 Score = 40.1 bits (20), Expect = 8.7 Identities = 35/40 (87%) Strand = Plus / Minus Query: 413 tgttgttgctgtagttgctgctcctgcatctgctgaggcg 452 ||||| |||||| ||||||||| |||| ||||||||||| Sbjct: 2127 tgttgctgctgttgttgctgctgctgctgctgctgaggcg 2088
>dbj|AK152266.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830057M17 product:Rho GTPase activating protein 17, full insert sequence Length = 3112 Score = 40.1 bits (20), Expect = 8.7 Identities = 35/40 (87%) Strand = Plus / Minus Query: 413 tgttgttgctgtagttgctgctcctgcatctgctgaggcg 452 ||||| |||||| ||||||||| |||| ||||||||||| Sbjct: 1866 tgttgctgctgttgttgctgctgctgctgctgctgaggcg 1827
>dbj|AB178959.1| Macaca fascicularis testis cDNA clone: QtsA-10091, similar to human TATA box binding protein (TBP), mRNA, RefSeq: NM_003194.2 Length = 1852 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 412 ctgttgttgctgtagttgctgctcctgc 439 ||||||||||||| ||||||||| |||| Sbjct: 486 ctgttgttgctgttgttgctgctgctgc 459
>dbj|AB168365.1| Macaca fascicularis testis cDNA clone: QtsA-11515, similar to human TATA box binding protein (TBP), mRNA, RefSeq: NM_003194.2 Length = 1875 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 412 ctgttgttgctgtagttgctgctcctgc 439 ||||||||||||| ||||||||| |||| Sbjct: 484 ctgttgttgctgttgttgctgctgctgc 457
>dbj|AK036617.1| Mus musculus adult male bone cDNA, RIKEN full-length enriched library, clone:9830141P14 product:NADRIN homolog [Rattus norvegicus], full insert sequence Length = 3169 Score = 40.1 bits (20), Expect = 8.7 Identities = 35/40 (87%) Strand = Plus / Minus Query: 413 tgttgttgctgtagttgctgctcctgcatctgctgaggcg 452 ||||| |||||| ||||||||| |||| ||||||||||| Sbjct: 1866 tgttgctgctgttgttgctgctgctgctgctgctgaggcg 1827
>gb|AC135056.4| Homo sapiens chromosome 17, clone RP13-650J16, complete sequence Length = 96066 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 506 cctggggatgcagcaggtgg 525 |||||||||||||||||||| Sbjct: 50516 cctggggatgcagcaggtgg 50535
>dbj|AK036468.1| Mus musculus adult male bone cDNA, RIKEN full-length enriched library, clone:9830113J03 product:NADRIN homolog [Rattus norvegicus], full insert sequence Length = 3169 Score = 40.1 bits (20), Expect = 8.7 Identities = 35/40 (87%) Strand = Plus / Minus Query: 413 tgttgttgctgtagttgctgctcctgcatctgctgaggcg 452 ||||| |||||| ||||||||| |||| ||||||||||| Sbjct: 1866 tgttgctgctgttgttgctgctgctgctgctgctgaggcg 1827
>dbj|AK046411.1| Mus musculus adult male corpora quadrigemina cDNA, RIKEN full-length enriched library, clone:B230380O05 product:NADRIN homolog [Rattus norvegicus], full insert sequence Length = 3313 Score = 40.1 bits (20), Expect = 8.7 Identities = 35/40 (87%) Strand = Plus / Minus Query: 413 tgttgttgctgtagttgctgctcctgcatctgctgaggcg 452 ||||| |||||| ||||||||| |||| ||||||||||| Sbjct: 2070 tgttgctgctgttgttgctgctgctgctgctgctgaggcg 2031
>gb|AC092216.1|AC092216 Drosophila melanogaster, chromosome 2L, region 25F-26A, BAC clone BACR10M11, complete sequence Length = 174832 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 413 tgttgttgctgtagttgctg 432 |||||||||||||||||||| Sbjct: 68873 tgttgttgctgtagttgctg 68854
>gb|AC160656.3| Pan troglodytes BAC clone CH251-1C6 from chromosome unknown, complete sequence Length = 194844 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 acttgaggggcctggggaat 354 |||||||||||||||||||| Sbjct: 135249 acttgaggggcctggggaat 135230
>dbj|AK017483.1| Mus musculus 8 days embryo whole body cDNA, RIKEN full-length enriched library, clone:5730403H17 product:Rho GTPase activating protein 17, full insert sequence Length = 1526 Score = 40.1 bits (20), Expect = 8.7 Identities = 35/40 (87%) Strand = Plus / Minus Query: 413 tgttgttgctgtagttgctgctcctgcatctgctgaggcg 452 ||||| |||||| ||||||||| |||| ||||||||||| Sbjct: 335 tgttgctgctgttgttgctgctgctgctgctgctgaggcg 296
>emb|BX000463.19| Zebrafish DNA sequence from clone CH211-266I2, complete sequence Length = 164682 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 412 ctgttgttgctgtagttgctgctcctgc 439 ||||||||||||| ||||||||| |||| Sbjct: 49058 ctgttgttgctgttgttgctgctgctgc 49031
>gb|AC007147.8|AC007147 Drosophila melanogaster, chromosome 2L, region 32A-, BAC clone BACR19N18, complete sequence Length = 196248 Score = 40.1 bits (20), Expect = 8.7 Identities = 32/36 (88%) Strand = Plus / Plus Query: 412 ctgttgttgctgtagttgctgctcctgcatctgctg 447 |||||| ||||| ||||||||| |||||||||||| Sbjct: 154807 ctgttgctgctgcggttgctgctgctgcatctgctg 154842
>gb|AC095043.3| Homo sapiens BAC clone RP11-124A7 from 4, complete sequence Length = 178037 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 577 agccaaatacaaaagattct 596 |||||||||||||||||||| Sbjct: 60989 agccaaatacaaaagattct 60970
>gb|AC116986.2| Dictyostelium discoideum chromosome 2 map 2234041-2567370 strain AX4, complete sequence Length = 333321 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 413 tgttgttgctgtagttgctg 432 |||||||||||||||||||| Sbjct: 235703 tgttgttgctgtagttgctg 235722
>gb|AC116982.2| Dictyostelium discoideum chromosome 2 map 3622643-3879522 strain AX4, complete sequence Length = 256879 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 413 tgttgttgctgtagttgctg 432 |||||||||||||||||||| Sbjct: 31488 tgttgttgctgtagttgctg 31507
>gb|DQ163914.1| Bacteriophage 119X, complete genome Length = 43365 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 405 tctgagcctgttgttgctgtagttgctg 432 ||||||||||||||||||| ||||||| Sbjct: 7626 tctgagcctgttgttgctgctgttgctg 7599
>gb|AC158657.2| Mus musculus 6 BAC RP23-395C12 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 202215 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 405 tctgagcctgttgttgctgtagttgctg 432 |||||| ||| ||||||||||||||||| Sbjct: 82226 tctgaggctgctgttgctgtagttgctg 82253
>ref|XM_317605.2| Anopheles gambiae str. PEST ENSANGP00000009941 (ENSANGG00000007452), partial mRNA Length = 1932 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 413 tgttgttgctgtagttgctgctcc 436 |||||||||||| ||||||||||| Sbjct: 1025 tgttgttgctgttgttgctgctcc 1002
>emb|CT030636.13| Mouse DNA sequence from clone RP23-432O2 on chromosome 17, complete sequence Length = 204320 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 413 tgttgttgctgtagttgctg 432 |||||||||||||||||||| Sbjct: 4828 tgttgttgctgtagttgctg 4847
>gb|AC116804.22| Mus musculus chromosome 17, clone RP24-343C24, complete sequence Length = 186153 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 413 tgttgttgctgtagttgctg 432 |||||||||||||||||||| Sbjct: 30523 tgttgttgctgtagttgctg 30542
>gb|AF145662.1|AF145662 Drosophila melanogaster clone GH10711 BcDNA.GH10711 (BcDNA.GH10711) mRNA, complete cds Length = 2562 Score = 40.1 bits (20), Expect = 8.7 Identities = 32/36 (88%) Strand = Plus / Minus Query: 412 ctgttgttgctgtagttgctgctcctgcatctgctg 447 |||||| ||||| ||||||||| |||||||||||| Sbjct: 1267 ctgttgctgctgcggttgctgctgctgcatctgctg 1232
>gb|AC005706.6|AC005706 Drosophila melanogaster, chromosome 2R, region 51D1-51D2, P1 clone DS04940, complete sequence Length = 72808 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 415 ttgttgctgtagttgctgctcctg 438 |||||||||| ||||||||||||| Sbjct: 57819 ttgttgctgttgttgctgctcctg 57842
>gb|AF146687.1|FRNINE1 Fugu rubripes U2 small nuclear ribonucleoprotein auxiliary factor subunit-related protein (U2AF1-RS2), 19 kDa Golgi adaptor protein adaptin (AP19), and phosphorylase kinase alpha 2 subunit (PHKA2) genes, complete cds; kelch protein (KELCH1) and kelch protein (KELCH2) genes, partial cds; and protein phosphatase 1 (PPEF-1), X-linked juvenile retinoschisis precursor protein (XLRS1), and serine-threonine kinase 9 (STK9) genes, complete cds Length = 62576 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 412 ctgttgttgctgtagttgctgctcctgc 439 ||||||||||||||| ||||||| |||| Sbjct: 54132 ctgttgttgctgtagctgctgctgctgc 54159
>gb|DQ327758.1| Drosophila melanogaster clone 98 mRNA sequence Length = 2830 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 412 ctgttgttgctgtagttgctgctcctgc 439 ||||||||||||| ||||||||| |||| Sbjct: 2076 ctgttgttgctgttgttgctgctgctgc 2103
>gb|AE003629.2| Drosophila melanogaster chromosome 2L, section 38 of 83 of the complete sequence Length = 261176 Score = 40.1 bits (20), Expect = 8.7 Identities = 32/36 (88%) Strand = Plus / Minus Query: 412 ctgttgttgctgtagttgctgctcctgcatctgctg 447 |||||| ||||| ||||||||| |||||||||||| Sbjct: 255950 ctgttgctgctgcggttgctgctgctgcatctgctg 255915
>gb|AE003612.2| Drosophila melanogaster chromosome 2L, section 21 of 83 of the complete sequence Length = 260673 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 413 tgttgttgctgtagttgctg 432 |||||||||||||||||||| Sbjct: 125206 tgttgttgctgtagttgctg 125225
>gb|AE003816.4| Drosophila melanogaster chromosome 2R, section 34 of 73 of the complete sequence Length = 287287 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 447 gaggcgttagaggggtcctc 466 |||||||||||||||||||| Sbjct: 226684 gaggcgttagaggggtcctc 226703
>gb|AE003812.4| Drosophila melanogaster chromosome 2R, section 38 of 73 of the complete sequence Length = 255772 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 415 ttgttgctgtagttgctgctcctg 438 |||||||||| ||||||||||||| Sbjct: 109352 ttgttgctgttgttgctgctcctg 109375
>gb|AE003557.4| Drosophila melanogaster chromosome 3L, section 28 of 83 of the complete sequence Length = 287988 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 412 ctgttgttgctgtagttgctgctcctgc 439 ||||||||||||| ||||||||| |||| Sbjct: 1281 ctgttgttgctgttgttgctgctgctgc 1308
>gb|AE003484.3| Drosophila melanogaster chromosome X, section 36 of 74 of the complete sequence Length = 314111 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 412 ctgttgttgctgtagttgctgctcctgc 439 ||||||||||||| ||||||||| |||| Sbjct: 140335 ctgttgttgctgttgttgctgctgctgc 140308
>gb|AF067207.1|AF067207 Drosophila melanogaster CLOCK mRNA, complete cds Length = 3582 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 412 ctgttgttgctgtagttgctgctcctgc 439 ||||||||||||| ||||||||| |||| Sbjct: 2789 ctgttgttgctgttgttgctgctgctgc 2762
>gb|AE003451.5| Drosophila melanogaster chromosome X, section 35 of 74 of the complete sequence Length = 285729 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 412 ctgttgttgctgtagttgctgctcctgc 439 ||||||||||||| ||||||||| |||| Sbjct: 213875 ctgttgttgctgttgttgctgctgctgc 213848
>gb|AE000782.1| Archaeoglobus fulgidus DSM 4304, complete genome Length = 2178400 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 433 ctcctgcatctgctgaggcgttag 456 ||||||||||||||| |||||||| Sbjct: 1705978 ctcctgcatctgctgcggcgttag 1705955
>gb|AF069997.1|AF069997 Drosophila melanogaster CLOCK mRNA, complete cds Length = 3084 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 412 ctgttgttgctgtagttgctgctcctgc 439 ||||||||||||| ||||||||| |||| Sbjct: 2433 ctgttgttgctgttgttgctgctgctgc 2406
>gb|AF065133.1|AF065133 Drosophila melanogaster CLOCK (Clk) mRNA, complete cds Length = 3551 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 412 ctgttgttgctgtagttgctgctcctgc 439 ||||||||||||| ||||||||| |||| Sbjct: 2682 ctgttgttgctgttgttgctgctgctgc 2655
>ref|NM_001037827.1| Gallus gallus beta globin protein 1 (BGP1), mRNA Length = 1668 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 412 ctgttgttgctgtagttgctgctcctgc 439 ||||||||||||| ||||||||| |||| Sbjct: 1065 ctgttgttgctgttgttgctgctgctgc 1038
>gb|AC167817.4| Mus musculus BAC clone RP23-146N9 from chromosome 17, complete sequence Length = 213670 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 413 tgttgttgctgtagttgctg 432 |||||||||||||||||||| Sbjct: 98100 tgttgttgctgtagttgctg 98119
>emb|AL513467.1|NC17E5 Neurospora crassa DNA linkage group V Cosmid contig 17E5 Length = 130049 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 413 tgttgttgctgtagttgctgctcc 436 |||||||||||| ||||||||||| Sbjct: 85387 tgttgttgctgttgttgctgctcc 85364
>gb|AC004758.1|AC004758 Drosophila melanogaster DNA sequence (P1s DS06106 (D123), DS05973 (D122), and DS08584 (D118)), complete sequence Length = 174311 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 413 tgttgttgctgtagttgctg 432 |||||||||||||||||||| Sbjct: 8585 tgttgttgctgtagttgctg 8566
>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica Length = 4003362 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 312 ctgctgcataggctggttgt 331 |||||||||||||||||||| Sbjct: 1101657 ctgctgcataggctggttgt 1101638
>gb|AC118547.41| Mus musculus strain C57BL/6J clone rp23-3g4 map 17, complete sequence Length = 234061 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 413 tgttgttgctgtagttgctg 432 |||||||||||||||||||| Sbjct: 65708 tgttgttgctgtagttgctg 65689
>emb|AL671857.16| Mouse DNA sequence from clone RP23-176A21 on chromosome 3, complete sequence Length = 207354 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 412 ctgttgttgctgtagttgctgctcctgc 439 ||||||||||||| ||||||||| |||| Sbjct: 66645 ctgttgttgctgttgttgctgctgctgc 66672 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 412 ctgttgttgctgtagttgctgctcctgc 439 ||||||||||||| ||||||||| |||| Sbjct: 66438 ctgttgttgctgttgttgctgctgctgc 66465
>emb|AL626775.11| Mouse DNA sequence from clone RP23-325M14 on chromosome 4, complete sequence Length = 190641 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 65 ggtaaagccaaggcaagcat 84 |||||||||||||||||||| Sbjct: 134742 ggtaaagccaaggcaagcat 134723
>gb|CP000103.1| Nitrosospira multiformis ATCC 25196, complete genome Length = 3184243 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 427 ttgctgctcctgcatctgct 446 |||||||||||||||||||| Sbjct: 3026538 ttgctgctcctgcatctgct 3026557
>dbj|AB060554.1| Mus musculus mRNA for Nadrin2, complete cds Length = 3177 Score = 40.1 bits (20), Expect = 8.7 Identities = 35/40 (87%) Strand = Plus / Minus Query: 413 tgttgttgctgtagttgctgctcctgcatctgctgaggcg 452 ||||| |||||| ||||||||| |||| ||||||||||| Sbjct: 1927 tgttgctgctgttgttgctgctgctgctgctgctgaggcg 1888
>dbj|AB060553.1| Mus musculus mRNA for Nadrin1, complete cds Length = 3411 Score = 40.1 bits (20), Expect = 8.7 Identities = 35/40 (87%) Strand = Plus / Minus Query: 413 tgttgttgctgtagttgctgctcctgcatctgctgaggcg 452 ||||| |||||| ||||||||| |||| ||||||||||| Sbjct: 2161 tgttgctgctgttgttgctgctgctgctgctgctgaggcg 2122
>dbj|D86231.1| Sarcophaga peregrina mRNA for arylphorin gene-specific binding protein-2, complete cds Length = 2047 Score = 40.1 bits (20), Expect = 8.7 Identities = 32/36 (88%) Strand = Plus / Minus Query: 412 ctgttgttgctgtagttgctgctcctgcatctgctg 447 ||||||||| ||| ||||||| | |||||||||||| Sbjct: 1009 ctgttgttgttgttgttgctgttgctgcatctgctg 974 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,661,751 Number of Sequences: 3902068 Number of extensions: 4661751 Number of successful extensions: 89848 Number of sequences better than 10.0: 154 Number of HSP's better than 10.0 without gapping: 154 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 89335 Number of HSP's gapped (non-prelim): 513 length of query: 638 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 615 effective length of database: 17,143,297,704 effective search space: 10543128087960 effective search space used: 10543128087960 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)