ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd16j01 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY596527.1| Saccharum officinarum clone SCCCLB1004G11, complete sequence Length = 1189 Score = 303 bits (153), Expect = 3e-79 Identities = 260/296 (87%) Strand = Plus / Plus Query: 280 tcctcgtcctggtgagcaactttcttccgcaacactttctcaaaatcaatcttttccacg 339 ||||| ||||||||||||| ||||| |||||||| |||||||| ||||||||||| | Sbjct: 325 tcctcatcctggtgagcaaacttcttgcgcaacaccttctcaaactcaatcttttcaaga 384 Query: 340 ggcttggcattctcaacagcgtgtgccttggctaagttggaatagttggcagccgactcc 399 ||||||||||||||| |||| || ||||||| | |||||||||||||||| |||||| Sbjct: 385 ggcttggcattctcatcagcatgcgccttggacagactggaatagttggcagctgactcc 444 Query: 400 gctataaaagcaatctcctcatctgtgagcttcctcagaaatttcgctgggtttccaccc 459 || |||||||| ||||| |||||||||||||||||||||||||| || ||||| |||||| Sbjct: 445 gcaataaaagcgatctcgtcatctgtgagcttcctcagaaatttggcggggttcccaccc 504 Query: 460 catacctctccacaagggatccttgtattctgtcttacaagggctncggcagcaaccatc 519 ||||||||||||||||||||||| |||||||||| ||| |||||| | ||||| |||||| Sbjct: 505 catacctctccacaagggatcctagtattctgtcgtacgagggctccagcagctaccatc 564 Query: 520 ccatgcttttctacaacaacaccatctaacagggttgctcccataccaacaaaagc 575 || |||||||| ||||| ||||||||||| |||||||| ||||| ||||||||||| Sbjct: 565 ccgtgcttttcaacaacgacaccatctaatagggttgcccccatgccaacaaaagc 620 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 47 aagtgcatggtcagctttagaacattgctcgacccaaaattattg 91 |||||||||| |||||||| ||||| ||||||||||| ||||||| Sbjct: 90 aagtgcatggccagctttataacatcgctcgacccaagattattg 134
>gb|BT017158.1| Zea mays clone EL01N0368A12.c mRNA sequence Length = 1060 Score = 264 bits (133), Expect = 3e-67 Identities = 255/296 (86%) Strand = Plus / Minus Query: 280 tcctcgtcctggtgagcaactttcttccgcaacactttctcaaaatcaatcttttccacg 339 ||||| ||||||||||||| ||||| || ||||| |||||||| ||||||||||| | Sbjct: 800 tcctcatcctggtgagcaaacttcttgcgtaacaccttctcaaactcaatcttttcaaga 741 Query: 340 ggcttggcattctcaacagcgtgtgccttggctaagttggaatagttggcagccgactcc 399 |||||||||||||| |||| || |||||| | ||||||||||||| ||| || ||| Sbjct: 740 ggcttggcattctcggcagcatgcaccttggacagattggaatagttggaagctgattcc 681 Query: 400 gctataaaagcaatctcctcatctgtgagcttcctcagaaatttcgctgggtttccaccc 459 | ||||| || ||||| |||||||||||||||||||||||||| || ||||| || ||| Sbjct: 680 gtgataaatgcgatctcgtcatctgtgagcttcctcagaaatttggcagggttccctccc 621 Query: 460 catacctctccacaagggatccttgtattctgtcttacaagggctncggcagcaaccatc 519 ||||||||||||||||||||||| ||||||||||||||||||| | | ||||| |||||| Sbjct: 620 catacctctccacaagggatcctagtattctgtcttacaagggatcctgcagctaccatc 561 Query: 520 ccatgcttttctacaacaacaccatctaacagggttgctcccataccaacaaaagc 575 ||||||||||| ||||| ||||||||||| |||||||| ||||| ||||||||||| Sbjct: 560 ccatgcttttcaacaacgacaccatctaatagggttgcccccatgccaacaaaagc 505 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 47 aagtgcatggtcagctttagaacattgctcgacccaaaattattg 91 |||||||||| |||||||| ||||| ||||||||||| ||||||| Sbjct: 1034 aagtgcatggccagctttataacatcgctcgacccaagattattg 990
>dbj|AK122051.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033114G12, full insert sequence Length = 1036 Score = 264 bits (133), Expect = 3e-67 Identities = 291/344 (84%) Strand = Plus / Minus Query: 229 ggcgccagctctggagggacttcccgagtggcaccaagcatggaaccgtgttcctcgtcc 288 |||| |||||| |||| || |||||||| ||||||| ||| ||| |||||||||| ||| Sbjct: 872 ggcgtcagctccggagtaacctcccgagtagcaccaatcattgaatcgtgttcctcatcc 813 Query: 289 tggtgagcaactttcttccgcaacactttctcaaaatcaatcttttccacgggcttggca 348 ||||||||| ||||| || |||| |||||||| ||| ||||||| || ||||||||| Sbjct: 812 tggtgagcagacttcttgcggaacagcttctcaaattcagtcttttcaacaggcttggca 753 Query: 349 ttctcaacagcgtgtgccttggctaagttggaatagttggcagccgactccgctataaaa 408 |||||| |||| || ||||| || | |||||||||| | ||| || || ||||| Sbjct: 752 ttctcagcagcatgggcctttgccagagtggaatagttagaagctgattctttgataaac 693 Query: 409 gcaatctcctcatctgtgagcttcctcagaaatttcgctgggtttccaccccatacctct 468 | |||||| ||||| |||||||||||||| ||||| || |||||||| |||||||||||| Sbjct: 692 gtaatctcgtcatcagtgagcttcctcaggaatttggcagggtttcctccccatacctct 633 Query: 469 ccacaagggatccttgtattctgtcttacaagggctncggcagcaaccatcccatgcttt 528 ||||| ||||||||||| |||||||||||||||||| | ||||||||||||||||||||| Sbjct: 632 ccacaggggatccttgtgttctgtcttacaagggctccagcagcaaccatcccatgcttt 573 Query: 529 tctacaacaacaccatctaacagggttgctcccataccaacaaa 572 || || |||||||||||||||||||| || |||||||||||||| Sbjct: 572 tccacgacaacaccatctaacagggtcgcccccataccaacaaa 529 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 tgctcgacccaaaattattg 91 |||||||||||||||||||| Sbjct: 1030 tgctcgacccaaaattattg 1011
>dbj|AK104205.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-304-F03, full insert sequence Length = 1086 Score = 264 bits (133), Expect = 3e-67 Identities = 291/344 (84%) Strand = Plus / Minus Query: 229 ggcgccagctctggagggacttcccgagtggcaccaagcatggaaccgtgttcctcgtcc 288 |||| |||||| |||| || |||||||| ||||||| ||| ||| |||||||||| ||| Sbjct: 922 ggcgtcagctccggagtaacctcccgagtagcaccaatcattgaatcgtgttcctcatcc 863 Query: 289 tggtgagcaactttcttccgcaacactttctcaaaatcaatcttttccacgggcttggca 348 ||||||||| ||||| || |||| |||||||| ||| ||||||| || ||||||||| Sbjct: 862 tggtgagcagacttcttgcggaacagcttctcaaattcagtcttttcaacaggcttggca 803 Query: 349 ttctcaacagcgtgtgccttggctaagttggaatagttggcagccgactccgctataaaa 408 |||||| |||| || ||||| || | |||||||||| | ||| || || ||||| Sbjct: 802 ttctcagcagcatgggcctttgccagagtggaatagttagaagctgattctttgataaac 743 Query: 409 gcaatctcctcatctgtgagcttcctcagaaatttcgctgggtttccaccccatacctct 468 | |||||| ||||| |||||||||||||| ||||| || |||||||| |||||||||||| Sbjct: 742 gtaatctcgtcatcagtgagcttcctcaggaatttggcagggtttcctccccatacctct 683 Query: 469 ccacaagggatccttgtattctgtcttacaagggctncggcagcaaccatcccatgcttt 528 ||||| ||||||||||| |||||||||||||||||| | ||||||||||||||||||||| Sbjct: 682 ccacaggggatccttgtgttctgtcttacaagggctccagcagcaaccatcccatgcttt 623 Query: 529 tctacaacaacaccatctaacagggttgctcccataccaacaaa 572 || || |||||||||||||||||||| || |||||||||||||| Sbjct: 622 tccacgacaacaccatctaacagggtcgcccccataccaacaaa 579 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 tgctcgacccaaaattattg 91 |||||||||||||||||||| Sbjct: 1080 tgctcgacccaaaattattg 1061
>dbj|AK071713.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023109L19, full insert sequence Length = 1156 Score = 264 bits (133), Expect = 3e-67 Identities = 291/344 (84%) Strand = Plus / Minus Query: 229 ggcgccagctctggagggacttcccgagtggcaccaagcatggaaccgtgttcctcgtcc 288 |||| |||||| |||| || |||||||| ||||||| ||| ||| |||||||||| ||| Sbjct: 914 ggcgtcagctccggagtaacctcccgagtagcaccaatcattgaatcgtgttcctcatcc 855 Query: 289 tggtgagcaactttcttccgcaacactttctcaaaatcaatcttttccacgggcttggca 348 ||||||||| ||||| || |||| |||||||| ||| ||||||| || ||||||||| Sbjct: 854 tggtgagcagacttcttgcggaacagcttctcaaattcagtcttttcaacaggcttggca 795 Query: 349 ttctcaacagcgtgtgccttggctaagttggaatagttggcagccgactccgctataaaa 408 |||||| |||| || ||||| || | |||||||||| | ||| || || ||||| Sbjct: 794 ttctcagcagcatgggcctttgccagagtggaatagttagaagctgattctttgataaac 735 Query: 409 gcaatctcctcatctgtgagcttcctcagaaatttcgctgggtttccaccccatacctct 468 | |||||| ||||| |||||||||||||| ||||| || |||||||| |||||||||||| Sbjct: 734 gtaatctcgtcatcagtgagcttcctcaggaatttggcagggtttcctccccatacctct 675 Query: 469 ccacaagggatccttgtattctgtcttacaagggctncggcagcaaccatcccatgcttt 528 ||||| ||||||||||| |||||||||||||||||| | ||||||||||||||||||||| Sbjct: 674 ccacaggggatccttgtgttctgtcttacaagggctccagcagcaaccatcccatgcttt 615 Query: 529 tctacaacaacaccatctaacagggttgctcccataccaacaaa 572 || || |||||||||||||||||||| || |||||||||||||| Sbjct: 614 tccacgacaacaccatctaacagggtcgcccccataccaacaaa 571 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Minus Query: 47 aagtgcatggtcagctttagaacattgctcgacccaaaattattg 91 |||| ||||| ||||||| | ||| |||||||||||||||||||| Sbjct: 1097 aagtacatggccagcttttgcacaatgctcgacccaaaattattg 1053
>dbj|AK060908.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-F08, full insert sequence Length = 1086 Score = 264 bits (133), Expect = 3e-67 Identities = 291/344 (84%) Strand = Plus / Minus Query: 229 ggcgccagctctggagggacttcccgagtggcaccaagcatggaaccgtgttcctcgtcc 288 |||| |||||| |||| || |||||||| ||||||| ||| ||| |||||||||| ||| Sbjct: 922 ggcgtcagctccggagtaacctcccgagtagcaccaatcattgaatcgtgttcctcatcc 863 Query: 289 tggtgagcaactttcttccgcaacactttctcaaaatcaatcttttccacgggcttggca 348 ||||||||| ||||| || |||| |||||||| ||| ||||||| || ||||||||| Sbjct: 862 tggtgagcagacttcttgcggaacagcttctcaaattcagtcttttcaacaggcttggca 803 Query: 349 ttctcaacagcgtgtgccttggctaagttggaatagttggcagccgactccgctataaaa 408 |||||| |||| || ||||| || | |||||||||| | ||| || || ||||| Sbjct: 802 ttctcagcagcatgggcctttgccagagtggaatagttagaagctgattctttgataaac 743 Query: 409 gcaatctcctcatctgtgagcttcctcagaaatttcgctgggtttccaccccatacctct 468 | |||||| ||||| |||||||||||||| ||||| || |||||||| |||||||||||| Sbjct: 742 gtaatctcgtcatcagtgagcttcctcaggaatttggcagggtttcctccccatacctct 683 Query: 469 ccacaagggatccttgtattctgtcttacaagggctncggcagcaaccatcccatgcttt 528 ||||| ||||||||||| |||||||||||||||||| | ||||||||||||||||||||| Sbjct: 682 ccacaggggatccttgtgttctgtcttacaagggctccagcagcaaccatcccatgcttt 623 Query: 529 tctacaacaacaccatctaacagggttgctcccataccaacaaa 572 || || |||||||||||||||||||| || |||||||||||||| Sbjct: 622 tccacgacaacaccatctaacagggtcgcccccataccaacaaa 579 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 tgctcgacccaaaattattg 91 |||||||||||||||||||| Sbjct: 1080 tgctcgacccaaaattattg 1061
>gb|AY105930.1| Zea mays PCO135569 mRNA sequence Length = 1279 Score = 228 bits (115), Expect = 2e-56 Identities = 246/290 (84%) Strand = Plus / Minus Query: 286 tcctggtgagcaactttcttccgcaacactttctcaaaatcaatcttttccacgggcttg 345 ||||||||||||| ||||| | |||||| |||||||| ||||||||||| | || ||| Sbjct: 838 tcctggtgagcaaacttcttgcccaacaccttctcaaactcaatcttttcaagaggtttg 779 Query: 346 gcattctcaacagcgtgtgccttggctaagttggaatagttggcagccgactccgctata 405 ||||||||| |||| || |||||| | ||||||||||||||||| || ||||| || Sbjct: 778 gcattctcagcagcatggaccttggacagattggaatagttggcagctgattccgcaatg 719 Query: 406 aaagcaatctcctcatctgtgagcttcctcagaaatttcgctgggtttccaccccatacc 465 ||| ||||| |||||||||||||||||||||||||| || ||||| || ||||||||| Sbjct: 718 aaactgatctcgtcatctgtgagcttcctcagaaatttggcagggttccctccccatacc 659 Query: 466 tctccacaagggatccttgtattctgtcttacaagggctncggcagcaaccatcccatgc 525 ||||||||||||||||| |||||||| | ||| |||||| | ||||| ||||| || ||| Sbjct: 658 tctccacaagggatcctagtattctgccgtacgagggctccagcagccaccattccgtgc 599 Query: 526 ttttctacaacaacaccatctaacagggttgctcccataccaacaaaagc 575 ||||| ||||||||||||||||| |||||||| || || ||||||||||| Sbjct: 598 ttttcaacaacaacaccatctaatagggttgccccaatgccaacaaaagc 549
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 157 bits (79), Expect = 5e-35 Identities = 102/110 (92%) Strand = Plus / Minus Query: 463 acctctccacaagggatccttgtattctgtcttacaagggctncggcagcaaccatccca 522 ||||||||||| ||||||||||| |||||||||||||||||| | ||||||||||||||| Sbjct: 10121038 acctctccacaggggatccttgtgttctgtcttacaagggctccagcagcaaccatccca 10120979 Query: 523 tgcttttctacaacaacaccatctaacagggttgctcccataccaacaaa 572 |||||||| || |||||||||||||||||||| || |||||||||||||| Sbjct: 10120978 tgcttttccacgacaacaccatctaacagggtcgcccccataccaacaaa 10120929 Score = 115 bits (58), Expect = 2e-22 Identities = 193/238 (81%) Strand = Plus / Minus Query: 229 ggcgccagctctggagggacttcccgagtggcaccaagcatggaaccgtgttcctcgtcc 288 |||| |||||| |||| || |||||||| ||||||| ||| ||| |||||||||| ||| Sbjct: 10121590 ggcgtcagctccggagtaacctcccgagtagcaccaatcattgaatcgtgttcctcatcc 10121531 Query: 289 tggtgagcaactttcttccgcaacactttctcaaaatcaatcttttccacgggcttggca 348 ||||||||| ||||| || |||| |||||||| ||| ||||||| || ||||||||| Sbjct: 10121530 tggtgagcagacttcttgcggaacagcttctcaaattcagtcttttcaacaggcttggca 10121471 Query: 349 ttctcaacagcgtgtgccttggctaagttggaatagttggcagccgactccgctataaaa 408 |||||| |||| || ||||| || | |||||||||| | ||| || || ||||| Sbjct: 10121470 ttctcagcagcatgggcctttgccagagtggaatagttagaagctgattctttgataaac 10121411 Query: 409 gcaatctcctcatctgtgagcttcctcagaaatttcgctgggtttccaccccatacct 466 | |||||| ||||| |||||||||||||| ||||| || |||||||| |||||||||| Sbjct: 10121410 gtaatctcgtcatcagtgagcttcctcaggaatttggcagggtttcctccccatacct 10121353 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Minus Query: 47 aagtgcatggtcagctttagaacattgctcgacccaaaattattg 91 |||| ||||| ||||||| | ||| |||||||||||||||||||| Sbjct: 10121773 aagtacatggccagcttttgcacaatgctcgacccaaaattattg 10121729 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 314 ctttctcaaaatcaatcttt 333 |||||||||||||||||||| Sbjct: 9481999 ctttctcaaaatcaatcttt 9482018
>dbj|AP003631.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0581F09 Length = 154248 Score = 157 bits (79), Expect = 5e-35 Identities = 102/110 (92%) Strand = Plus / Minus Query: 463 acctctccacaagggatccttgtattctgtcttacaagggctncggcagcaaccatccca 522 ||||||||||| ||||||||||| |||||||||||||||||| | ||||||||||||||| Sbjct: 68507 acctctccacaggggatccttgtgttctgtcttacaagggctccagcagcaaccatccca 68448 Query: 523 tgcttttctacaacaacaccatctaacagggttgctcccataccaacaaa 572 |||||||| || |||||||||||||||||||| || |||||||||||||| Sbjct: 68447 tgcttttccacgacaacaccatctaacagggtcgcccccataccaacaaa 68398 Score = 115 bits (58), Expect = 2e-22 Identities = 193/238 (81%) Strand = Plus / Minus Query: 229 ggcgccagctctggagggacttcccgagtggcaccaagcatggaaccgtgttcctcgtcc 288 |||| |||||| |||| || |||||||| ||||||| ||| ||| |||||||||| ||| Sbjct: 69059 ggcgtcagctccggagtaacctcccgagtagcaccaatcattgaatcgtgttcctcatcc 69000 Query: 289 tggtgagcaactttcttccgcaacactttctcaaaatcaatcttttccacgggcttggca 348 ||||||||| ||||| || |||| |||||||| ||| ||||||| || ||||||||| Sbjct: 68999 tggtgagcagacttcttgcggaacagcttctcaaattcagtcttttcaacaggcttggca 68940 Query: 349 ttctcaacagcgtgtgccttggctaagttggaatagttggcagccgactccgctataaaa 408 |||||| |||| || ||||| || | |||||||||| | ||| || || ||||| Sbjct: 68939 ttctcagcagcatgggcctttgccagagtggaatagttagaagctgattctttgataaac 68880 Query: 409 gcaatctcctcatctgtgagcttcctcagaaatttcgctgggtttccaccccatacct 466 | |||||| ||||| |||||||||||||| ||||| || |||||||| |||||||||| Sbjct: 68879 gtaatctcgtcatcagtgagcttcctcaggaatttggcagggtttcctccccatacct 68822 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Minus Query: 47 aagtgcatggtcagctttagaacattgctcgacccaaaattattg 91 |||| ||||| ||||||| | ||| |||||||||||||||||||| Sbjct: 69242 aagtacatggccagcttttgcacaatgctcgacccaaaattattg 69198
>dbj|AP003018.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0004B13 Length = 142268 Score = 157 bits (79), Expect = 5e-35 Identities = 102/110 (92%) Strand = Plus / Minus Query: 463 acctctccacaagggatccttgtattctgtcttacaagggctncggcagcaaccatccca 522 ||||||||||| ||||||||||| |||||||||||||||||| | ||||||||||||||| Sbjct: 45637 acctctccacaggggatccttgtgttctgtcttacaagggctccagcagcaaccatccca 45578 Query: 523 tgcttttctacaacaacaccatctaacagggttgctcccataccaacaaa 572 |||||||| || |||||||||||||||||||| || |||||||||||||| Sbjct: 45577 tgcttttccacgacaacaccatctaacagggtcgcccccataccaacaaa 45528 Score = 115 bits (58), Expect = 2e-22 Identities = 193/238 (81%) Strand = Plus / Minus Query: 229 ggcgccagctctggagggacttcccgagtggcaccaagcatggaaccgtgttcctcgtcc 288 |||| |||||| |||| || |||||||| ||||||| ||| ||| |||||||||| ||| Sbjct: 46189 ggcgtcagctccggagtaacctcccgagtagcaccaatcattgaatcgtgttcctcatcc 46130 Query: 289 tggtgagcaactttcttccgcaacactttctcaaaatcaatcttttccacgggcttggca 348 ||||||||| ||||| || |||| |||||||| ||| ||||||| || ||||||||| Sbjct: 46129 tggtgagcagacttcttgcggaacagcttctcaaattcagtcttttcaacaggcttggca 46070 Query: 349 ttctcaacagcgtgtgccttggctaagttggaatagttggcagccgactccgctataaaa 408 |||||| |||| || ||||| || | |||||||||| | ||| || || ||||| Sbjct: 46069 ttctcagcagcatgggcctttgccagagtggaatagttagaagctgattctttgataaac 46010 Query: 409 gcaatctcctcatctgtgagcttcctcagaaatttcgctgggtttccaccccatacct 466 | |||||| ||||| |||||||||||||| ||||| || |||||||| |||||||||| Sbjct: 46009 gtaatctcgtcatcagtgagcttcctcaggaatttggcagggtttcctccccatacct 45952 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Minus Query: 47 aagtgcatggtcagctttagaacattgctcgacccaaaattattg 91 |||| ||||| ||||||| | ||| |||||||||||||||||||| Sbjct: 46372 aagtacatggccagcttttgcacaatgctcgacccaaaattattg 46328
>gb|DQ284493.1| Solanum tuberosum clone 050G10 transcription factor APFI-like mRNA, complete cds Length = 1260 Score = 117 bits (59), Expect = 4e-23 Identities = 127/150 (84%) Strand = Plus / Minus Query: 423 tgtgagcttcctcagaaatttcgctgggtttccaccccatacctctccacaagggatcct 482 ||||||||||||||||||| | ||||| ||||| ||||| |||||||||||||| ||||| Sbjct: 580 tgtgagcttcctcagaaatctagctggatttcctccccagacctctccacaaggaatcct 521 Query: 483 tgtattctgtcttacaagggctncggcagcaaccatcccatgcttttctacaacaacacc 542 |||||||| || |||||||| | || |||||||| ||| || || |||||||| || Sbjct: 520 cgtattctgcctgacaagggcaccagccgcaaccattgcatttttctccacaacaactcc 461 Query: 543 atctaacagggttgctcccataccaacaaa 572 ||||| ||| ||||| |||||||||||||| Sbjct: 460 atctagcagagttgcacccataccaacaaa 431 Score = 54.0 bits (27), Expect = 5e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 280 tcctcgtcctggtgagcaactttcttccgcaacactttctcaaaatcaatc 330 |||||||| | | |||||| ||||||||||||||| |||||||| |||||| Sbjct: 723 tcctcgtctttgcgagcaaatttcttccgcaacaccttctcaaattcaatc 673
>ref|NM_187710.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 774 Score = 115 bits (58), Expect = 2e-22 Identities = 193/238 (81%) Strand = Plus / Minus Query: 229 ggcgccagctctggagggacttcccgagtggcaccaagcatggaaccgtgttcctcgtcc 288 |||| |||||| |||| || |||||||| ||||||| ||| ||| |||||||||| ||| Sbjct: 755 ggcgtcagctccggagtaacctcccgagtagcaccaatcattgaatcgtgttcctcatcc 696 Query: 289 tggtgagcaactttcttccgcaacactttctcaaaatcaatcttttccacgggcttggca 348 ||||||||| ||||| || |||| |||||||| ||| ||||||| || ||||||||| Sbjct: 695 tggtgagcagacttcttgcggaacagcttctcaaattcagtcttttcaacaggcttggca 636 Query: 349 ttctcaacagcgtgtgccttggctaagttggaatagttggcagccgactccgctataaaa 408 |||||| |||| || ||||| || | |||||||||| | ||| || || ||||| Sbjct: 635 ttctcagcagcatgggcctttgccagagtggaatagttagaagctgattctttgataaac 576 Query: 409 gcaatctcctcatctgtgagcttcctcagaaatttcgctgggtttccaccccatacct 466 | |||||| ||||| |||||||||||||| ||||| || |||||||| |||||||||| Sbjct: 575 gtaatctcgtcatcagtgagcttcctcaggaatttggcagggtttcctccccatacct 518 Score = 103 bits (52), Expect = 6e-19 Identities = 69/75 (92%) Strand = Plus / Minus Query: 498 aagggctncggcagcaaccatcccatgcttttctacaacaacaccatctaacagggttgc 557 ||||||| | ||||||||||||||||||||||| || |||||||||||||||||||| || Sbjct: 504 aagggctccagcagcaaccatcccatgcttttccacgacaacaccatctaacagggtcgc 445 Query: 558 tcccataccaacaaa 572 |||||||||||||| Sbjct: 444 ccccataccaacaaa 430
>ref|NM_101815.2| Arabidopsis thaliana unknown protein AT1G19580 mRNA, complete cds Length = 1357 Score = 111 bits (56), Expect = 3e-21 Identities = 121/143 (84%) Strand = Plus / Minus Query: 403 ataaaagcaatctcctcatctgtgagcttcctcagaaatttcgctgggtttccaccccat 462 ||||||||||| |||||||| ||||||||||| || || | ||||||||||| |||||| Sbjct: 773 ataaaagcaatttcctcatcagtgagcttcctgaggaaccttgctgggtttcctccccat 714 Query: 463 acctctccacaagggatccttgtattctgtcttacaagggctncggcagcaaccatccca 522 ||||||||| |||| || || || || |||| |||||| || | ||||||||||||||| Sbjct: 713 acctctccagaaggaattctggtgttttgtcgtacaagtgcaccagcagcaaccatccca 654 Query: 523 tgcttttctacaacaacaccatc 545 |||||||| ||||| || ||||| Sbjct: 653 tgcttttcaacaacgaccccatc 631
>gb|AY085025.1| Arabidopsis thaliana clone 12477 mRNA, complete sequence Length = 1337 Score = 111 bits (56), Expect = 3e-21 Identities = 121/143 (84%) Strand = Plus / Minus Query: 403 ataaaagcaatctcctcatctgtgagcttcctcagaaatttcgctgggtttccaccccat 462 ||||||||||| |||||||| ||||||||||| || || | ||||||||||| |||||| Sbjct: 775 ataaaagcaatttcctcatcagtgagcttcctgaggaaccttgctgggtttcctccccat 716 Query: 463 acctctccacaagggatccttgtattctgtcttacaagggctncggcagcaaccatccca 522 ||||||||| |||| || || || || |||| |||||| || | ||||||||||||||| Sbjct: 715 acctctccagaaggaattctggtgttttgtcgtacaagcgcaccagcagcaaccatccca 656 Query: 523 tgcttttctacaacaacaccatc 545 |||||||| ||||| || ||||| Sbjct: 655 tgcttttcaacaacgaccccatc 633
>dbj|AK176887.1| Arabidopsis thaliana mRNA, complete cds, clone: RAFL25-45-B01 Length = 1131 Score = 111 bits (56), Expect = 3e-21 Identities = 121/143 (84%) Strand = Plus / Minus Query: 403 ataaaagcaatctcctcatctgtgagcttcctcagaaatttcgctgggtttccaccccat 462 ||||||||||| |||||||| ||||||||||| || || | ||||||||||| |||||| Sbjct: 659 ataaaagcaatttcctcatcagtgagcttcctgaggaaccttgctgggtttcctccccat 600 Query: 463 acctctccacaagggatccttgtattctgtcttacaagggctncggcagcaaccatccca 522 ||||||||| |||| || || || || |||| |||||| || | ||||||||||||||| Sbjct: 599 acctctccagaaggaattctggtgttttgtcgtacaagtgcaccagcagcaaccatccca 540 Query: 523 tgcttttctacaacaacaccatc 545 |||||||| ||||| || ||||| Sbjct: 539 tgcttttcaacaacgaccccatc 517
>dbj|AK176844.1| Arabidopsis thaliana mRNA, complete cds, clone: RAFL25-40-H22 Length = 1293 Score = 111 bits (56), Expect = 3e-21 Identities = 121/143 (84%) Strand = Plus / Minus Query: 403 ataaaagcaatctcctcatctgtgagcttcctcagaaatttcgctgggtttccaccccat 462 ||||||||||| |||||||| ||||||||||| || || | ||||||||||| |||||| Sbjct: 717 ataaaagcaatttcctcatcagtgagcttcctgaggaaccttgctgggtttcctccccat 658 Query: 463 acctctccacaagggatccttgtattctgtcttacaagggctncggcagcaaccatccca 522 ||||||||| |||| || || || || |||| |||||| || | ||||||||||||||| Sbjct: 657 acctctccagaaggaattctggtgttttgtcgtacaagtgcaccagcagcaaccatccca 598 Query: 523 tgcttttctacaacaacaccatc 545 |||||||| ||||| || ||||| Sbjct: 597 tgcttttcaacaacgaccccatc 575
>dbj|AK175388.1| Arabidopsis thaliana mRNA, complete cds, clone: RAFL21-82-L07 Length = 1158 Score = 111 bits (56), Expect = 3e-21 Identities = 121/143 (84%) Strand = Plus / Minus Query: 403 ataaaagcaatctcctcatctgtgagcttcctcagaaatttcgctgggtttccaccccat 462 ||||||||||| |||||||| ||||||||||| || || | ||||||||||| |||||| Sbjct: 686 ataaaagcaatttcctcatcagtgagcttcctgaggaaccttgctgggtttcctccccat 627 Query: 463 acctctccacaagggatccttgtattctgtcttacaagggctncggcagcaaccatccca 522 ||||||||| |||| || || || || |||| |||||| || | ||||||||||||||| Sbjct: 626 acctctccagaaggaattctggtgttttgtcgtacaagtgcaccagcagcaaccatccca 567 Query: 523 tgcttttctacaacaacaccatc 545 |||||||| ||||| || ||||| Sbjct: 566 tgcttttcaacaacgaccccatc 544
>gb|BT014370.1| Lycopersicon esculentum clone 133658F, mRNA sequence Length = 1217 Score = 75.8 bits (38), Expect = 1e-10 Identities = 127/157 (80%) Strand = Plus / Minus Query: 412 atctcctcatctgtgagcttcctcagaaatttcgctgggtttccaccccatacctctcca 471 ||||| ||||| || |||||||||||||| || || || || || ||||||||||||| Sbjct: 748 atctcttcatcagttagcttcctcagaaacttagcgggattgcctgcccatacctctccg 689 Query: 472 caagggatccttgtattctgtcttacaagggctncggcagcaaccatcccatgcttttct 531 | || |||||||| |||||| | ||||||||| | ||||||||||| |||| || ||| Sbjct: 688 gagggaatccttgtgttctgtttcacaagggctcctgcagcaaccatggcatgtttctct 629 Query: 532 acaacaacaccatctaacagggttgctcccataccaa 568 ||| ||||||||| | ||| || || |||||||||| Sbjct: 628 acatgaacaccatcaagcagtgtggcccccataccaa 592
>gb|BT017479.1| Zea mays clone EL01N0408G09.c mRNA sequence Length = 1166 Score = 65.9 bits (33), Expect = 1e-07 Identities = 134/168 (79%) Strand = Plus / Minus Query: 409 gcaatctcctcatctgtgagcttcctcagaaatttcgctgggtttccaccccatacctct 468 ||||||||||| ||||| |||||||| || || || || || || || |||| |||||| Sbjct: 576 gcaatctcctcttctgtaagcttccttaggaacttggcaggattaccgacccagacctct 517 Query: 469 ccacaagggatccttgtattctgtcttacaagggctncggcagcaaccatcccatgcttt 528 ||| |||| |||||||||||||| | ||||| | | | ||| ||||||| | |||||| Sbjct: 516 ccagaaggaatccttgtattctgcttaacaagagatcctgcaccaaccatgctgtgcttt 457 Query: 529 tctacaacaacaccatctaacagggttgctcccataccaacaaaagct 576 || || || || ||||| | ||| || || |||||||||||||||||| Sbjct: 456 tcaaccaccactccatcaagcagagtggcacccataccaacaaaagct 409
>gb|AC137669.12| Medicago truncatula clone mth2-27m3, complete sequence Length = 120323 Score = 65.9 bits (33), Expect = 1e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 463 acctctccacaagggatccttgtattctgtcttacaagggctncggcagcaaccat 518 ||||||||||| ||||| ||||||||||| || ||||| ||| ||||||||||||| Sbjct: 77080 acctctccacaggggattcttgtattctgcctgacaagagctccggcagcaaccat 77135
>gb|AY107290.1| Zea mays PCO063868 mRNA sequence Length = 1381 Score = 65.9 bits (33), Expect = 1e-07 Identities = 134/168 (79%) Strand = Plus / Minus Query: 409 gcaatctcctcatctgtgagcttcctcagaaatttcgctgggtttccaccccatacctct 468 ||||||||||| ||||| |||||||| || || || || || || || |||| |||||| Sbjct: 764 gcaatctcctcttctgtaagcttccttaggaacttggcaggattaccgacccagacctct 705 Query: 469 ccacaagggatccttgtattctgtcttacaagggctncggcagcaaccatcccatgcttt 528 ||| |||| |||||||||||||| | ||||| | | | ||| ||||||| | |||||| Sbjct: 704 ccagaaggaatccttgtattctgcttaacaagagatcctgcaccaaccatgctgtgcttt 645 Query: 529 tctacaacaacaccatctaacagggttgctcccataccaacaaaagct 576 || || || || ||||| | ||| || || |||||||||||||||||| Sbjct: 644 tcaactaccactccatcaagcagagtggcacccataccaacaaaagct 597
>gb|AC024609.2| Arabidopsis thaliana chromosome I BAC F14P1 genomic sequence, complete sequence Length = 90341 Score = 63.9 bits (32), Expect = 5e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 403 ataaaagcaatctcctcatctgtgagcttcctcagaaatttcgctgggtttccaccccat 462 ||||||||||| |||||||| ||||||||||| || || | ||||||||||| |||||| Sbjct: 85587 ataaaagcaatttcctcatcagtgagcttcctgaggaaccttgctgggtttcctccccat 85646 Query: 463 acct 466 |||| Sbjct: 85647 acct 85650 Score = 61.9 bits (31), Expect = 2e-06 Identities = 72/86 (83%) Strand = Plus / Plus Query: 460 catacctctccacaagggatccttgtattctgtcttacaagggctncggcagcaaccatc 519 |||||||||||| |||| || || || || |||| |||||| || | |||||||||||| Sbjct: 86051 catacctctccagaaggaattctggtgttttgtcgtacaagtgcaccagcagcaaccatc 86110 Query: 520 ccatgcttttctacaacaacaccatc 545 ||||||||||| ||||| || ||||| Sbjct: 86111 ccatgcttttcaacaacgaccccatc 86136
>gb|AF249876.1|AF249876 Arabidopsis thaliana transcription factor APFI mRNA, complete cds Length = 1216 Score = 63.9 bits (32), Expect = 5e-07 Identities = 106/131 (80%) Strand = Plus / Minus Query: 445 gctgggtttccaccccatacctctccacaagggatccttgtattctgtcttacaagggct 504 ||||| ||||| ||||| ||||||||| ||||||| | || |||||| | ||||| | Sbjct: 696 gctggatttcctccccacacctctccagaagggattcgcgtgttctgtttcacaagagaa 637 Query: 505 ncggcagcaaccatcccatgcttttctacaacaacaccatctaacagggttgctcccata 564 | ||||||||||| |||| || || || ||||||||||| | || |||||||||||| Sbjct: 636 ccagcagcaaccatggcatgtttctcaaccacaacaccatcaagtagtgttgctcccata 577 Query: 565 ccaacaaaagc 575 ||||||||||| Sbjct: 576 ccaacaaaagc 566
>gb|AC025808.8|AC025808 Genomic sequence for Arabidopsis thaliana BAC F18O14 from chromosome I, complete sequence Length = 120977 Score = 63.9 bits (32), Expect = 5e-07 Identities = 56/64 (87%) Strand = Plus / Minus Query: 403 ataaaagcaatctcctcatctgtgagcttcctcagaaatttcgctgggtttccaccccat 462 ||||||||||| |||||||| ||||||||||| || || | ||||||||||| |||||| Sbjct: 110059 ataaaagcaatttcctcatcagtgagcttcctgaggaaccttgctgggtttcctccccat 110000 Query: 463 acct 466 |||| Sbjct: 109999 acct 109996 Score = 61.9 bits (31), Expect = 2e-06 Identities = 72/86 (83%) Strand = Plus / Minus Query: 460 catacctctccacaagggatccttgtattctgtcttacaagggctncggcagcaaccatc 519 |||||||||||| |||| || || || || |||| |||||| || | |||||||||||| Sbjct: 109595 catacctctccagaaggaattctggtgttttgtcgtacaagtgcaccagcagcaaccatc 109536 Query: 520 ccatgcttttctacaacaacaccatc 545 ||||||||||| ||||| || ||||| Sbjct: 109535 ccatgcttttcaacaacgaccccatc 109510
>ref|NM_103620.2| Arabidopsis thaliana APFI AT1G47260 (APFI) mRNA, complete cds Length = 1750 Score = 58.0 bits (29), Expect = 3e-05 Identities = 130/164 (79%) Strand = Plus / Minus Query: 412 atctcctcatctgtgagcttcctcagaaatttcgctgggtttccaccccatacctctcca 471 ||||| |||||||| | ||| |||| || || ||||| ||||| ||||| ||||||||| Sbjct: 727 atctcttcatctgttaactttctcatgaactttgctggatttcctccccacacctctcca 668 Query: 472 caagggatccttgtattctgtcttacaagggctncggcagcaaccatcccatgcttttct 531 ||||||| | || |||||| | ||||| | | ||||||||||| |||| || || Sbjct: 667 gaagggattcgcgtgttctgtttcacaagagaaccagcagcaaccatggcatgtttctca 608 Query: 532 acaacaacaccatctaacagggttgctcccataccaacaaaagc 575 || || |||||||| | || ||||||||||||||||||||||| Sbjct: 607 accaccacaccatcaagtagtgttgctcccataccaacaaaagc 564
>gb|AY113936.1| Arabidopsis thaliana unknown protein (At1g47260) mRNA, complete cds Length = 868 Score = 58.0 bits (29), Expect = 3e-05 Identities = 130/164 (79%) Strand = Plus / Minus Query: 412 atctcctcatctgtgagcttcctcagaaatttcgctgggtttccaccccatacctctcca 471 ||||| |||||||| | ||| |||| || || ||||| ||||| ||||| ||||||||| Sbjct: 590 atctcttcatctgttaactttctcatgaactttgctggatttcctccccacacctctcca 531 Query: 472 caagggatccttgtattctgtcttacaagggctncggcagcaaccatcccatgcttttct 531 ||||||| | || |||||| | ||||| | | ||||||||||| |||| || || Sbjct: 530 gaagggattcgcgtgttctgtttcacaagagaaccagcagcaaccatggcatgtttctca 471 Query: 532 acaacaacaccatctaacagggttgctcccataccaacaaaagc 575 || || |||||||| | || ||||||||||||||||||||||| Sbjct: 470 accaccacaccatcaagtagtgttgctcccataccaacaaaagc 427
>gb|AY045979.1| Arabidopsis thaliana unknown protein (At1g47260) mRNA, complete cds Length = 1182 Score = 58.0 bits (29), Expect = 3e-05 Identities = 130/164 (79%) Strand = Plus / Minus Query: 412 atctcctcatctgtgagcttcctcagaaatttcgctgggtttccaccccatacctctcca 471 ||||| |||||||| | ||| |||| || || ||||| ||||| ||||| ||||||||| Sbjct: 696 atctcttcatctgttaactttctcatgaactttgctggatttcctccccacacctctcca 637 Query: 472 caagggatccttgtattctgtcttacaagggctncggcagcaaccatcccatgcttttct 531 ||||||| | || |||||| | ||||| | | ||||||||||| |||| || || Sbjct: 636 gaagggattcgcgtgttctgtttcacaagagaaccagcagcaaccatggcatgtttctca 577 Query: 532 acaacaacaccatctaacagggttgctcccataccaacaaaagc 575 || || |||||||| | || ||||||||||||||||||||||| Sbjct: 576 accaccacaccatcaagtagtgttgctcccataccaacaaaagc 533
>emb|BX816589.1|CNS0ADBJ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH57ZD01 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1092 Score = 50.1 bits (25), Expect = 0.008 Identities = 129/164 (78%) Strand = Plus / Minus Query: 412 atctcctcatctgtgagcttcctcagaaatttcgctgggtttccaccccatacctctcca 471 ||||| |||||||| | ||| |||| || || ||||| ||||| ||||| ||||||||| Sbjct: 677 atctcttcatctgttaactttctcatgaactttgctggatttcctccccacacctctcca 618 Query: 472 caagggatccttgtattctgtcttacaagggctncggcagcaaccatcccatgcttttct 531 ||||||| | || |||||| | ||||| | | ||||||||||| |||| || || Sbjct: 617 gaagggattcgcgtgttctgtttcacaagagaaccagcagcaaccatggcatgtttctca 558 Query: 532 acaacaacaccatctaacagggttgctcccataccaacaaaagc 575 || || |||||||| | || |||||||||||||||||||||| Sbjct: 557 accaccacaccatcaagtagttttgctcccataccaacaaaagc 514
>ref|XM_479312.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1155 Score = 48.1 bits (24), Expect = 0.032 Identities = 95/119 (79%) Strand = Plus / Minus Query: 458 cccatacctctccacaagggatccttgtattctgtcttacaagggctncggcagcaacca 517 |||| ||||||||| |||| ||||| || || || ||||||||| | | ||| |||||| Sbjct: 626 cccagacctctccagaaggaatcctggtgttttgctttacaagggatcctgcaccaacca 567 Query: 518 tcccatgcttttctacaacaacaccatctaacagggttgctcccataccaacaaaagct 576 | | |||||||| || || || ||||| | ||| || || |||||||||||||||||| Sbjct: 566 tgctgtgcttttcaaccaccactccatcaagcagagtggcacccataccaacaaaagct 508
>gb|AC079677.4|AC079677 Arabidopsis thaliana chromosome 1 BAC F8G22 genomic sequence, complete sequence Length = 42801 Score = 48.1 bits (24), Expect = 0.032 Identities = 57/68 (83%) Strand = Plus / Minus Query: 508 gcagcaaccatcccatgcttttctacaacaacaccatctaacagggttgctcccatacca 567 ||||||||||| |||| || || || || |||||||| | || ||||||||||||||| Sbjct: 7979 gcagcaaccatggcatgtttctcaaccaccacaccatcaagtagtgttgctcccatacca 7920 Query: 568 acaaaagc 575 |||||||| Sbjct: 7919 acaaaagc 7912
>dbj|AK103904.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033150M03, full insert sequence Length = 1238 Score = 48.1 bits (24), Expect = 0.032 Identities = 95/119 (79%) Strand = Plus / Minus Query: 458 cccatacctctccacaagggatccttgtattctgtcttacaagggctncggcagcaacca 517 |||| ||||||||| |||| |||||||| ||||| | ||||| | | | ||| |||||| Sbjct: 716 cccagacctctccagaaggaatccttgtgttctgcttaacaagcgatcctgcaccaacca 657 Query: 518 tcccatgcttttctacaacaacaccatctaacagggttgctcccataccaacaaaagct 576 | | |||||||| || || || ||||| | ||| || || |||||||||||||||||| Sbjct: 656 tgctgtgcttttcaacgaccactccatcaagcagagtggcacccataccaacaaaagct 598
>dbj|AK060158.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-G03, full insert sequence Length = 1155 Score = 48.1 bits (24), Expect = 0.032 Identities = 95/119 (79%) Strand = Plus / Minus Query: 458 cccatacctctccacaagggatccttgtattctgtcttacaagggctncggcagcaacca 517 |||| ||||||||| |||| ||||| || || || ||||||||| | | ||| |||||| Sbjct: 626 cccagacctctccagaaggaatcctggtgttttgctttacaagggatcctgcaccaacca 567 Query: 518 tcccatgcttttctacaacaacaccatctaacagggttgctcccataccaacaaaagct 576 | | |||||||| || || || ||||| | ||| || || |||||||||||||||||| Sbjct: 566 tgctgtgcttttcaaccaccactccatcaagcagagtggcacccataccaacaaaagct 508
>dbj|AK058974.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-020-D04, full insert sequence Length = 1195 Score = 48.1 bits (24), Expect = 0.032 Identities = 95/119 (79%) Strand = Plus / Minus Query: 458 cccatacctctccacaagggatccttgtattctgtcttacaagggctncggcagcaacca 517 |||| ||||||||| |||| |||||||| ||||| | ||||| | | | ||| |||||| Sbjct: 718 cccagacctctccagaaggaatccttgtgttctgcttaacaagcgatcctgcaccaacca 659 Query: 518 tcccatgcttttctacaacaacaccatctaacagggttgctcccataccaacaaaagct 576 | | |||||||| || || || ||||| | ||| || || |||||||||||||||||| Sbjct: 658 tgctgtgcttttcaacgaccactccatcaagcagagtggcacccataccaacaaaagct 600
>ref|NM_126049.3| Arabidopsis thaliana unknown protein AT5G66510 mRNA, complete cds Length = 1223 Score = 46.1 bits (23), Expect = 0.13 Identities = 35/39 (89%) Strand = Plus / Minus Query: 429 cttcctcagaaatttcgctgggtttccaccccatacctc 467 ||||||||||||||| |||||||| || ||||| ||||| Sbjct: 707 cttcctcagaaatttagctgggttgcctccccaaacctc 669
>gb|AY079385.1| Arabidopsis thaliana putative ferripyochelin-binding protein (At5g66510) mRNA, complete cds Length = 808 Score = 46.1 bits (23), Expect = 0.13 Identities = 35/39 (89%) Strand = Plus / Minus Query: 429 cttcctcagaaatttcgctgggtttccaccccatacctc 467 ||||||||||||||| |||||||| || ||||| ||||| Sbjct: 573 cttcctcagaaatttagctgggttgcctccccaaacctc 535
>gb|AY045784.1| Arabidopsis thaliana putative ferripyochelin-binding protein (At5g66510) mRNA, complete cds Length = 1163 Score = 46.1 bits (23), Expect = 0.13 Identities = 35/39 (89%) Strand = Plus / Minus Query: 429 cttcctcagaaatttcgctgggtttccaccccatacctc 467 ||||||||||||||| |||||||| || ||||| ||||| Sbjct: 681 cttcctcagaaatttagctgggttgcctccccaaacctc 643
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 46.1 bits (23), Expect = 0.13 Identities = 91/114 (79%) Strand = Plus / Minus Query: 463 acctctccacaagggatccttgtattctgtcttacaagggctncggcagcaaccatccca 522 ||||||||| |||| |||||||| ||||| | ||||| | | | ||| ||||||| | Sbjct: 3550621 acctctccagaaggaatccttgtgttctgcttaacaagcgatcctgcaccaaccatgctg 3550562 Query: 523 tgcttttctacaacaacaccatctaacagggttgctcccataccaacaaaagct 576 |||||||| || || || ||||| | ||| || || |||||||||||||||||| Sbjct: 3550561 tgcttttcaacgaccactccatcaagcagagtggcacccataccaacaaaagct 3550508
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 46.1 bits (23), Expect = 0.13 Identities = 91/114 (79%) Strand = Plus / Plus Query: 463 acctctccacaagggatccttgtattctgtcttacaagggctncggcagcaaccatccca 522 ||||||||| |||| ||||| || || || ||||||||| | | ||| ||||||| | Sbjct: 26722829 acctctccagaaggaatcctggtgttttgctttacaagggatcctgcaccaaccatgctg 26722888 Query: 523 tgcttttctacaacaacaccatctaacagggttgctcccataccaacaaaagct 576 |||||||| || || || ||||| | ||| || || |||||||||||||||||| Sbjct: 26722889 tgcttttcaaccaccactccatcaagcagagtggcacccataccaacaaaagct 26722942
>emb|BX829487.1|CNS0A1JN Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB16ZG12 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 874 Score = 46.1 bits (23), Expect = 0.13 Identities = 35/39 (89%) Strand = Plus / Minus Query: 429 cttcctcagaaatttcgctgggtttccaccccatacctc 467 ||||||||||||||| |||||||| || ||||| ||||| Sbjct: 403 cttcctcagaaatttagctgggttgcctccccaaacctc 365
>gb|AY087379.1| Arabidopsis thaliana clone 34700 mRNA, complete sequence Length = 1198 Score = 46.1 bits (23), Expect = 0.13 Identities = 35/39 (89%) Strand = Plus / Minus Query: 429 cttcctcagaaatttcgctgggtttccaccccatacctc 467 ||||||||||||||| |||||||| || ||||| ||||| Sbjct: 708 cttcctcagaaatttagctgggttgcctccccaaacctc 670
>dbj|AP003765.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1003_C06 Length = 143168 Score = 46.1 bits (23), Expect = 0.13 Identities = 91/114 (79%) Strand = Plus / Plus Query: 463 acctctccacaagggatccttgtattctgtcttacaagggctncggcagcaaccatccca 522 ||||||||| |||| ||||| || || || ||||||||| | | ||| ||||||| | Sbjct: 69686 acctctccagaaggaatcctggtgttttgctttacaagggatcctgcaccaaccatgctg 69745 Query: 523 tgcttttctacaacaacaccatctaacagggttgctcccataccaacaaaagct 576 |||||||| || || || ||||| | ||| || || |||||||||||||||||| Sbjct: 69746 tgcttttcaaccaccactccatcaagcagagtggcacccataccaacaaaagct 69799
>dbj|AP004671.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0524G08 Length = 146690 Score = 46.1 bits (23), Expect = 0.13 Identities = 91/114 (79%) Strand = Plus / Plus Query: 463 acctctccacaagggatccttgtattctgtcttacaagggctncggcagcaaccatccca 522 ||||||||| |||| ||||| || || || ||||||||| | | ||| ||||||| | Sbjct: 140433 acctctccagaaggaatcctggtgttttgctttacaagggatcctgcaccaaccatgctg 140492 Query: 523 tgcttttctacaacaacaccatctaacagggttgctcccataccaacaaaagct 576 |||||||| || || || ||||| | ||| || || |||||||||||||||||| Sbjct: 140493 tgcttttcaaccaccactccatcaagcagagtggcacccataccaacaaaagct 140546
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 46.1 bits (23), Expect = 0.13 Identities = 91/114 (79%) Strand = Plus / Minus Query: 463 acctctccacaagggatccttgtattctgtcttacaagggctncggcagcaaccatccca 522 ||||||||| |||| |||||||| ||||| | ||||| | | | ||| ||||||| | Sbjct: 3550566 acctctccagaaggaatccttgtgttctgcttaacaagcgatcctgcaccaaccatgctg 3550507 Query: 523 tgcttttctacaacaacaccatctaacagggttgctcccataccaacaaaagct 576 |||||||| || || || ||||| | ||| || || |||||||||||||||||| Sbjct: 3550506 tgcttttcaacgaccactccatcaagcagagtggcacccataccaacaaaagct 3550453
>emb|AL954825.3|CNS08CD1 Oryza sativa chromosome 12, . BAC OJ2007_H06 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 103647 Score = 46.1 bits (23), Expect = 0.13 Identities = 91/114 (79%) Strand = Plus / Minus Query: 463 acctctccacaagggatccttgtattctgtcttacaagggctncggcagcaaccatccca 522 ||||||||| |||| |||||||| ||||| | ||||| | | | ||| ||||||| | Sbjct: 65549 acctctccagaaggaatccttgtgttctgcttaacaagcgatcctgcaccaaccatgctg 65490 Query: 523 tgcttttctacaacaacaccatctaacagggttgctcccataccaacaaaagct 576 |||||||| || || || ||||| | ||| || || |||||||||||||||||| Sbjct: 65489 tgcttttcaacgaccactccatcaagcagagtggcacccataccaacaaaagct 65436
>dbj|AB019228.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MCK7 Length = 87090 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 131 atataagaattcaaactgaagt 152 |||||||||||||||||||||| Sbjct: 27034 atataagaattcaaactgaagt 27013
>dbj|AB013389.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K1F13 Length = 83511 Score = 44.1 bits (22), Expect = 0.50 Identities = 34/38 (89%) Strand = Plus / Plus Query: 429 cttcctcagaaatttcgctgggtttccaccccatacct 466 ||||||||||||||| |||||||| || ||||| |||| Sbjct: 39136 cttcctcagaaatttagctgggttgcctccccaaacct 39173
>gb|AC139578.4| Mus musculus BAC clone RP23-188P12 from chromosome 18, complete sequence Length = 179415 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 176 gagaggaacacagataagcaaagct 200 |||||||| |||||||||||||||| Sbjct: 155531 gagaggaagacagataagcaaagct 155555
>gb|BC049182.1| Mus musculus hairless, mRNA (cDNA clone MGC:54518 IMAGE:6468299), complete cds Length = 5599 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 263 caagcatggaaccgtgttcctcgtcctgg 291 |||||| |||||| ||||||||||||||| Sbjct: 4372 caagcagggaaccttgttcctcgtcctgg 4400
>gb|BC040241.1| Homo sapiens WD repeat domain 41, mRNA (cDNA clone MGC:5405 IMAGE:3447269), complete cds Length = 2356 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 84 aattattgaaataatcttaaactgc 108 |||| |||||||||||||||||||| Sbjct: 1418 aatttttgaaataatcttaaactgc 1394
>ref|XM_797853.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053510153.10) partial mRNA Length = 1638 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 286 tcctggtgagcaactttcttc 306 ||||||||||||||||||||| Sbjct: 833 tcctggtgagcaactttcttc 813
>gb|AC122268.5| Mus musculus BAC clone RP23-216B15 from 14, complete sequence Length = 207136 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 263 caagcatggaaccgtgttcctcgtcctgg 291 |||||| |||||| ||||||||||||||| Sbjct: 196756 caagcagggaaccttgttcctcgtcctgg 196784
>ref|NM_021877.2| Mus musculus hairless (Hr), mRNA Length = 5599 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 263 caagcatggaaccgtgttcctcgtcctgg 291 |||||| |||||| ||||||||||||||| Sbjct: 4372 caagcagggaaccttgttcctcgtcctgg 4400
>gb|AC120797.9| Mus musculus chromosome 18, clone RP24-81D18, complete sequence Length = 210631 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 176 gagaggaacacagataagcaaagct 200 |||||||| |||||||||||||||| Sbjct: 80364 gagaggaagacagataagcaaagct 80388
>emb|AL834138.1|HSM805349 Homo sapiens mRNA; cDNA DKFZp434J2114 (from clone DKFZp434J2114) Length = 3327 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 84 aattattgaaataatcttaaactgc 108 |||| |||||||||||||||||||| Sbjct: 2347 aatttttgaaataatcttaaactgc 2323
>emb|CR625903.1| full-length cDNA clone CS0DM014YF08 of Fetal liver of Homo sapiens (human) Length = 1643 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 84 aattattgaaataatcttaaactgc 108 |||| |||||||||||||||||||| Sbjct: 1614 aatttttgaaataatcttaaactgc 1590
>emb|CR616409.1| full-length cDNA clone CS0DL008YJ03 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) Length = 1654 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 84 aattattgaaataatcttaaactgc 108 |||| |||||||||||||||||||| Sbjct: 1593 aatttttgaaataatcttaaactgc 1569
>dbj|AK023977.1| Homo sapiens cDNA FLJ13915 fis, clone Y79AA1000328, weakly similar to SEL-10 PROTEIN Length = 2301 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 84 aattattgaaataatcttaaactgc 108 |||| |||||||||||||||||||| Sbjct: 1368 aatttttgaaataatcttaaactgc 1344
>dbj|AK021855.1| Homo sapiens cDNA FLJ11793 fis, clone HEMBA1006130, weakly similar to SEL-10 PROTEIN Length = 1941 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 84 aattattgaaataatcttaaactgc 108 |||| |||||||||||||||||||| Sbjct: 1452 aatttttgaaataatcttaaactgc 1428
>dbj|AK001766.1| Homo sapiens cDNA FLJ10904 fis, clone OVARC1000013, weakly similar to APOPTOTIC PROTEASE ACTIVATING FACTOR 1 Length = 2536 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 84 aattattgaaataatcttaaactgc 108 |||| |||||||||||||||||||| Sbjct: 1612 aatttttgaaataatcttaaactgc 1588
>gb|AC026182.4| Homo sapiens chromosome 3 clone RP11-279B12 map 3p, complete sequence Length = 167179 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 30 ggcaatacagaaactgcaagt 50 ||||||||||||||||||||| Sbjct: 74963 ggcaatacagaaactgcaagt 74983
>gb|AC087633.5| Homo sapiens chromosome 15, clone RP11-255M2, complete sequence Length = 179163 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 419 catctgtgagcttcctcagaa 439 ||||||||||||||||||||| Sbjct: 45502 catctgtgagcttcctcagaa 45482
>ref|NM_018268.2| Homo sapiens WD repeat domain 41 (WDR41), mRNA Length = 2608 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 84 aattattgaaataatcttaaactgc 108 |||| |||||||||||||||||||| Sbjct: 1633 aatttttgaaataatcttaaactgc 1609
>gb|AC022422.5| Homo sapiens chromosome 5 clone CTD-2199L4, complete sequence Length = 245697 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 84 aattattgaaataatcttaaactgc 108 |||| |||||||||||||||||||| Sbjct: 179495 aatttttgaaataatcttaaactgc 179519
>dbj|AK076280.1| Mus musculus 0 day neonate skin cDNA, RIKEN full-length enriched library, clone:4632409G21 product:hairless, full insert sequence Length = 2969 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 263 caagcatggaaccgtgttcctcgtcctgg 291 |||||| |||||| ||||||||||||||| Sbjct: 1857 caagcagggaaccttgttcctcgtcctgg 1885
>gb|DQ000563.1| Synthetic construct clone PSF:109395 DKFZp434J2114 gene, complete cds Length = 690 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 84 aattattgaaataatcttaaactgc 108 |||| |||||||||||||||||||| Sbjct: 656 aatttttgaaataatcttaaactgc 632
>gb|AC154563.2| Mus musculus BAC clone RP23-401E22 from chromosome 14, complete sequence Length = 206798 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 263 caagcatggaaccgtgttcctcgtcctgg 291 |||||| |||||| ||||||||||||||| Sbjct: 150789 caagcagggaaccttgttcctcgtcctgg 150761
>gb|AC010234.5|AC010234 Homo sapiens chromosome 5 clone CTC-337B15, complete sequence Length = 143553 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 84 aattattgaaataatcttaaactgc 108 |||| |||||||||||||||||||| Sbjct: 124365 aatttttgaaataatcttaaactgc 124341
>gb|AF115511.1| Homo sapiens MSTP048 (MST048) mRNA, complete cds Length = 2388 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 84 aattattgaaataatcttaaactgc 108 |||| |||||||||||||||||||| Sbjct: 1414 aatttttgaaataatcttaaactgc 1390
>gb|BC001807.1| Homo sapiens cDNA clone IMAGE:3354734, containing frame-shift errors Length = 1713 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 84 aattattgaaataatcttaaactgc 108 |||| |||||||||||||||||||| Sbjct: 1620 aatttttgaaataatcttaaactgc 1596
>gb|AC026214.4| Homo sapiens chromosome 3 clone RP11-717M12 map 3p, complete sequence Length = 174645 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 30 ggcaatacagaaactgcaagt 50 ||||||||||||||||||||| Sbjct: 172516 ggcaatacagaaactgcaagt 172536
>gb|AC136224.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0006B22, complete sequence Length = 166052 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 314 ctttctcaaaatcaatcttt 333 |||||||||||||||||||| Sbjct: 65184 ctttctcaaaatcaatcttt 65165
>gb|AC135242.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0070D14, complete sequence Length = 174780 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 314 ctttctcaaaatcaatcttt 333 |||||||||||||||||||| Sbjct: 75891 ctttctcaaaatcaatcttt 75910
>gb|AC147359.2| Xenopus tropicalis clone CH216-79G22, complete sequence Length = 165587 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 29 tggcaatacagaaactgcaa 48 |||||||||||||||||||| Sbjct: 34903 tggcaatacagaaactgcaa 34884
>emb|AL032621.1|CEY45F3A Caenorhabditis elegans YAC Y45F3A, complete sequence Length = 36654 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 441 tttcgctgggtttccacccc 460 |||||||||||||||||||| Sbjct: 24346 tttcgctgggtttccacccc 24327
>ref|XM_760984.1| Theileria parva strain Muguga chromosome 1 hypothetical protein (TP01_0558) partial mRNA Length = 1419 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 317 tctcaaaatcaatcttttcc 336 |||||||||||||||||||| Sbjct: 817 tctcaaaatcaatcttttcc 836
>gb|AE017245.1| Mycoplasma synoviae 53, complete genome Length = 799476 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 554 ttgctcccataccaacaaaa 573 |||||||||||||||||||| Sbjct: 728996 ttgctcccataccaacaaaa 729015
>emb|AL589736.6| Human DNA sequence from clone RP11-298P24 on chromosome 6, complete sequence Length = 53491 Score = 40.1 bits (20), Expect = 7.8 Identities = 22/23 (95%) Strand = Plus / Plus Query: 169 aagnaaggagaggaacacagata 191 ||| ||||||||||||||||||| Sbjct: 49232 aagaaaggagaggaacacagata 49254
>emb|AL357312.8| Human DNA sequence from clone RP11-390F10 on chromosome Xq21.2-22.1 Contains a eukaryotic translation elongation factor 1 alpha 1 (EEF1A1) pseudogene and a high-mobility group box 1 (HMGB1) pseudogene, complete sequence Length = 187469 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 acagaaactgcaagtgcatg 55 |||||||||||||||||||| Sbjct: 177890 acagaaactgcaagtgcatg 177909
>emb|AL138726.12| Human DNA sequence from clone RP1-139G21 on chromosome 6 Contains (part of) the SLC17A1, SLC17A2 and SLC17A3 genes for the sodium phosphate solute carrier family 17 members 1, 2 and 3 and a H2A (histone 2A) pseudogene, complete sequence Length = 136646 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 cccaaaattattgaaataat 98 |||||||||||||||||||| Sbjct: 120015 cccaaaattattgaaataat 120034
>emb|AL023693.25|HS32B1 Human DNA sequence from clone RP1-32B1 on chromosome 6q22.33-23.3 Contains the MYB gene for v-myb myeloblastosis viral oncogene homolog (avian), 2 novel genes, the 3' end of a novel protein and a CpG island, complete sequence Length = 188287 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 cccaaaattattgaaataat 98 |||||||||||||||||||| Sbjct: 15312 cccaaaattattgaaataat 15331
>emb|AL604031.10| Mouse DNA sequence from clone RP23-24O5 on chromosome 11 Contains a ribosomal protein L13 (Rpl13) pseudogene, a novel gene and two CpG islands, complete sequence Length = 215675 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 80 ccaaaattattgaaataatc 99 |||||||||||||||||||| Sbjct: 46098 ccaaaattattgaaataatc 46117
>gb|AC117445.12| Homo sapiens 3 BAC RP11-278A4 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 31868 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 cccaaaattattgaaataat 98 |||||||||||||||||||| Sbjct: 5004 cccaaaattattgaaataat 4985
>gb|AE009951.2| Fusobacterium nucleatum subsp. nucleatum ATCC 25586, complete genome Length = 2174500 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 116 aatgaacagaatagtatata 135 |||||||||||||||||||| Sbjct: 1522462 aatgaacagaatagtatata 1522443
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 314 ctttctcaaaatcaatcttt 333 |||||||||||||||||||| Sbjct: 15082927 ctttctcaaaatcaatcttt 15082946
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 314 ctttctcaaaatcaatcttt 333 |||||||||||||||||||| Sbjct: 14729770 ctttctcaaaatcaatcttt 14729751
>emb|BX816366.1|CNS0ADBR Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH44ZA11 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1058 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 556 gctcccataccaacaaaagc 575 |||||||||||||||||||| Sbjct: 499 gctcccataccaacaaaagc 480
>dbj|AP000837.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0424A08 Length = 151294 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 314 ctttctcaaaatcaatcttt 333 |||||||||||||||||||| Sbjct: 15428 ctttctcaaaatcaatcttt 15447
>emb|AL844511.14| Mouse DNA sequence from clone RP23-244B6 on chromosome 2, complete sequence Length = 144077 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 541 ccatctaacagggttgctcc 560 |||||||||||||||||||| Sbjct: 33156 ccatctaacagggttgctcc 33137
>emb|AL935163.7| Zebrafish DNA sequence from clone CH211-206K20, complete sequence Length = 158350 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 caaaattattgaaataatct 100 |||||||||||||||||||| Sbjct: 132636 caaaattattgaaataatct 132655
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 314 ctttctcaaaatcaatcttt 333 |||||||||||||||||||| Sbjct: 15164625 ctttctcaaaatcaatcttt 15164644 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,128,111 Number of Sequences: 3902068 Number of extensions: 5128111 Number of successful extensions: 102043 Number of sequences better than 10.0: 90 Number of HSP's better than 10.0 without gapping: 86 Number of HSP's successfully gapped in prelim test: 5 Number of HSP's that attempted gapping in prelim test: 101645 Number of HSP's gapped (non-prelim): 396 length of query: 576 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 553 effective length of database: 17,143,297,704 effective search space: 9480243630312 effective search space used: 9480243630312 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
