Clone Name | rbasd16i22 |
---|---|
Clone Library Name | barley_pub |
>dbj|AK065874.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013050J04, full insert sequence Length = 1866 Score = 335 bits (169), Expect = 1e-88 Identities = 331/385 (85%) Strand = Plus / Minus Query: 286 ccatatcttgtatccctgtaatggaaactagccattcttcctggtgttgacatactaggc 345 ||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| Sbjct: 1149 ccatatcttgtatccctgtaatggaaactagccattcttccaggtgttgcaatactaggt 1090 Query: 346 acggcccctgtgacaatgtactcatcatcgatttcatcaaatctgatttccctcaggtca 405 | |||||||||||| ||||| |||||||| |||||||||||||||||||| |||| |||| Sbjct: 1089 atggcccctgtgactatgtattcatcatcaatttcatcaaatctgatttctctcaagtca 1030 Query: 406 acagcttgtgtcggaacctcgagattgaagttttccagatgagcctgattgctgttcctc 465 |||| |||||| ||||||||||| || ||| |||| ||||| |||||||||||||||||| Sbjct: 1029 acagattgtgtgggaacctcgaggttaaagctttcgagatgtgcctgattgctgttcctc 970 Query: 466 cttccacttcctctattgtcccttcctctccctcttcttcgacttcttggatatctacaa 525 |||||||| ||||| | |||||| | || |||||||||| ||||||| | ||||| | Sbjct: 969 cttccactgcctcttctttcccttgcccttgctcttcttcgtcttcttgaagatctagag 910 Query: 526 aaagccttgcaacaaataaaagaccaccacttcctcctaaccctgcggagaacttcatag 585 || || || || | |||||||||||||| | ||| || |||| | || ||||||||| Sbjct: 909 aatcccctgaaaaacataaaagaccaccagtgccttctgacccgcctgaaaacttcatat 850 Query: 586 tcatctccagtatcatcatccccatactcaatcacatagtctccaagaacgataccatta 645 || |||||||| |||||||||||||||||||| ||||| ||||| ||||| || |||||| Sbjct: 849 tcttctccagtttcatcatccccatactcaatgacataatctcccagaacaattccatta 790 Query: 646 ggaacttgtgcatgtattgtgctca 670 |||||||||||||| || ||||||| Sbjct: 789 ggaacttgtgcatgaatcgtgctca 765 Score = 44.1 bits (22), Expect = 0.59 Identities = 28/30 (93%) Strand = Plus / Minus Query: 104 ttctgttgctactttttatgcacaggaagt 133 ||||||||||| ||| |||||||||||||| Sbjct: 1328 ttctgttgctaatttatatgcacaggaagt 1299
>dbj|AK059140.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-023-A03, full insert sequence Length = 1329 Score = 335 bits (169), Expect = 1e-88 Identities = 331/385 (85%) Strand = Plus / Minus Query: 286 ccatatcttgtatccctgtaatggaaactagccattcttcctggtgttgacatactaggc 345 ||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| Sbjct: 1098 ccatatcttgtatccctgtaatggaaactagccattcttccaggtgttgcaatactaggt 1039 Query: 346 acggcccctgtgacaatgtactcatcatcgatttcatcaaatctgatttccctcaggtca 405 | |||||||||||| ||||| |||||||| |||||||||||||||||||| |||| |||| Sbjct: 1038 atggcccctgtgactatgtattcatcatcaatttcatcaaatctgatttctctcaagtca 979 Query: 406 acagcttgtgtcggaacctcgagattgaagttttccagatgagcctgattgctgttcctc 465 |||| |||||| ||||||||||| || ||| |||| ||||| |||||||||||||||||| Sbjct: 978 acagattgtgtgggaacctcgaggttaaagctttcgagatgtgcctgattgctgttcctc 919 Query: 466 cttccacttcctctattgtcccttcctctccctcttcttcgacttcttggatatctacaa 525 |||||||| ||||| | |||||| | || |||||||||| ||||||| | ||||| | Sbjct: 918 cttccactgcctcttctttcccttgcccttgctcttcttcgtcttcttgaagatctagag 859 Query: 526 aaagccttgcaacaaataaaagaccaccacttcctcctaaccctgcggagaacttcatag 585 || || || || | |||||||||||||| | ||| || |||| | || ||||||||| Sbjct: 858 aatcccctgaaaaacataaaagaccaccagtgccttctgacccgcctgaaaacttcatat 799 Query: 586 tcatctccagtatcatcatccccatactcaatcacatagtctccaagaacgataccatta 645 || |||||||| |||||||||||||||||||| ||||| ||||| ||||| || |||||| Sbjct: 798 tcttctccagtttcatcatccccatactcaatgacataatctcccagaacaattccatta 739 Query: 646 ggaacttgtgcatgtattgtgctca 670 |||||||||||||| || ||||||| Sbjct: 738 ggaacttgtgcatgaatcgtgctca 714
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 307 bits (155), Expect = 3e-80 Identities = 317/371 (85%) Strand = Plus / Minus Query: 300 cctgtaatggaaactagccattcttcctggtgttgacatactaggcacggcccctgtgac 359 ||||||||||||||||||||||||||| ||||||| |||||||| | |||||||||||| Sbjct: 28580935 cctgtaatggaaactagccattcttccaggtgttgcaatactaggtatggcccctgtgac 28580876 Query: 360 aatgtactcatcatcgatttcatcaaatctgatttccctcaggtcaacagcttgtgtcgg 419 ||||| |||||||| |||||||||||||||||||| |||| |||||||| |||||| || Sbjct: 28580875 tatgtattcatcatcaatttcatcaaatctgatttctctcaagtcaacagattgtgtggg 28580816 Query: 420 aacctcgagattgaagttttccagatgagcctgattgctgttcctccttccacttcctct 479 ||||||||| || ||| |||| ||||| |||||||||||||||||||||||||| ||||| Sbjct: 28580815 aacctcgaggttaaagctttcgagatgtgcctgattgctgttcctccttccactgcctct 28580756 Query: 480 attgtcccttcctctccctcttcttcgacttcttggatatctacaaaaagccttgcaaca 539 | |||||| | || |||||||||| ||||||| | ||||| | || || || || | Sbjct: 28580755 tctttcccttgcccttgctcttcttcgtcttcttgaagatctagagaatcccctgaaaaa 28580696 Query: 540 aataaaagaccaccacttcctcctaaccctgcggagaacttcatagtcatctccagtatc 599 |||||||||||||| | ||| || |||| | || ||||||||| || |||||||| || Sbjct: 28580695 cataaaagaccaccagtgccttctgacccgcctgaaaacttcatattcttctccagtttc 28580636 Query: 600 atcatccccatactcaatcacatagtctccaagaacgataccattaggaacttgtgcatg 659 |||||||||||||||||| ||||| ||||| ||||| || |||||||||||||||||||| Sbjct: 28580635 atcatccccatactcaatgacataatctcccagaacaattccattaggaacttgtgcatg 28580576 Query: 660 tattgtgctca 670 || ||||||| Sbjct: 28580575 aatcgtgctca 28580565 Score = 44.1 bits (22), Expect = 0.59 Identities = 28/30 (93%) Strand = Plus / Minus Query: 104 ttctgttgctactttttatgcacaggaagt 133 ||||||||||| ||| |||||||||||||| Sbjct: 28581749 ttctgttgctaatttatatgcacaggaagt 28581720
>dbj|AP003770.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0550B04 Length = 150131 Score = 307 bits (155), Expect = 3e-80 Identities = 317/371 (85%) Strand = Plus / Minus Query: 300 cctgtaatggaaactagccattcttcctggtgttgacatactaggcacggcccctgtgac 359 ||||||||||||||||||||||||||| ||||||| |||||||| | |||||||||||| Sbjct: 72413 cctgtaatggaaactagccattcttccaggtgttgcaatactaggtatggcccctgtgac 72354 Query: 360 aatgtactcatcatcgatttcatcaaatctgatttccctcaggtcaacagcttgtgtcgg 419 ||||| |||||||| |||||||||||||||||||| |||| |||||||| |||||| || Sbjct: 72353 tatgtattcatcatcaatttcatcaaatctgatttctctcaagtcaacagattgtgtggg 72294 Query: 420 aacctcgagattgaagttttccagatgagcctgattgctgttcctccttccacttcctct 479 ||||||||| || ||| |||| ||||| |||||||||||||||||||||||||| ||||| Sbjct: 72293 aacctcgaggttaaagctttcgagatgtgcctgattgctgttcctccttccactgcctct 72234 Query: 480 attgtcccttcctctccctcttcttcgacttcttggatatctacaaaaagccttgcaaca 539 | |||||| | || |||||||||| ||||||| | ||||| | || || || || | Sbjct: 72233 tctttcccttgcccttgctcttcttcgtcttcttgaagatctagagaatcccctgaaaaa 72174 Query: 540 aataaaagaccaccacttcctcctaaccctgcggagaacttcatagtcatctccagtatc 599 |||||||||||||| | ||| || |||| | || ||||||||| || |||||||| || Sbjct: 72173 cataaaagaccaccagtgccttctgacccgcctgaaaacttcatattcttctccagtttc 72114 Query: 600 atcatccccatactcaatcacatagtctccaagaacgataccattaggaacttgtgcatg 659 |||||||||||||||||| ||||| ||||| ||||| || |||||||||||||||||||| Sbjct: 72113 atcatccccatactcaatgacataatctcccagaacaattccattaggaacttgtgcatg 72054 Query: 660 tattgtgctca 670 || ||||||| Sbjct: 72053 aatcgtgctca 72043 Score = 44.1 bits (22), Expect = 0.59 Identities = 28/30 (93%) Strand = Plus / Minus Query: 104 ttctgttgctactttttatgcacaggaagt 133 ||||||||||| ||| |||||||||||||| Sbjct: 73227 ttctgttgctaatttatatgcacaggaagt 73198
>dbj|AK072507.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023125M06, full insert sequence Length = 1279 Score = 307 bits (155), Expect = 3e-80 Identities = 317/371 (85%) Strand = Plus / Minus Query: 300 cctgtaatggaaactagccattcttcctggtgttgacatactaggcacggcccctgtgac 359 ||||||||||||||||||||||||||| ||||||| |||||||| | |||||||||||| Sbjct: 1135 cctgtaatggaaactagccattcttccaggtgttgcaatactaggtatggcccctgtgac 1076 Query: 360 aatgtactcatcatcgatttcatcaaatctgatttccctcaggtcaacagcttgtgtcgg 419 ||||| |||||||| |||||||||||||||||||| |||| |||||||| |||||| || Sbjct: 1075 tatgtattcatcatcaatttcatcaaatctgatttctctcaagtcaacagattgtgtggg 1016 Query: 420 aacctcgagattgaagttttccagatgagcctgattgctgttcctccttccacttcctct 479 ||||||||| || ||| |||| ||||| |||||||||||||||||||||||||| ||||| Sbjct: 1015 aacctcgaggttaaagctttcgagatgtgcctgattgctgttcctccttccactgcctct 956 Query: 480 attgtcccttcctctccctcttcttcgacttcttggatatctacaaaaagccttgcaaca 539 | |||||| | || |||||||||| ||||||| | ||||| | || || || || | Sbjct: 955 tctttcccttgcccttgctcttcttcgtcttcttgaagatctagagaatcccctgaaaaa 896 Query: 540 aataaaagaccaccacttcctcctaaccctgcggagaacttcatagtcatctccagtatc 599 |||||||||||||| | ||| || |||| | || ||||||||| || |||||||| || Sbjct: 895 cataaaagaccaccagtgccttctgacccgcctgaaaacttcatattcttctccagtttc 836 Query: 600 atcatccccatactcaatcacatagtctccaagaacgataccattaggaacttgtgcatg 659 |||||||||||||||||| ||||| ||||| ||||| || |||||||||||||||||||| Sbjct: 835 atcatccccatactcaatgacataatctcccagaacaattccattaggaacttgtgcatg 776 Query: 660 tattgtgctca 670 || ||||||| Sbjct: 775 aatcgtgctca 765
>dbj|AK104038.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-F09, full insert sequence Length = 1249 Score = 299 bits (151), Expect = 6e-78 Identities = 316/371 (85%) Strand = Plus / Minus Query: 300 cctgtaatggaaactagccattcttcctggtgttgacatactaggcacggcccctgtgac 359 ||||||||||||||||||||||||||| ||||||| |||||||| | |||||||||||| Sbjct: 1106 cctgtaatggaaactagccattcttccaggtgttgcaatactaggtatggcccctgtgac 1047 Query: 360 aatgtactcatcatcgatttcatcaaatctgatttccctcaggtcaacagcttgtgtcgg 419 ||||| ||| |||| |||||||||||||||||||| |||| |||||||| |||||| || Sbjct: 1046 tatgtattcaccatcaatttcatcaaatctgatttctctcaagtcaacagattgtgtggg 987 Query: 420 aacctcgagattgaagttttccagatgagcctgattgctgttcctccttccacttcctct 479 ||||||||| || ||| |||| ||||| |||||||||||||||||||||||||| ||||| Sbjct: 986 aacctcgaggttaaagctttcgagatgtgcctgattgctgttcctccttccactgcctct 927 Query: 480 attgtcccttcctctccctcttcttcgacttcttggatatctacaaaaagccttgcaaca 539 | |||||| | || |||||||||| ||||||| | ||||| | || || || || | Sbjct: 926 tctttcccttgcccttgctcttcttcgtcttcttgaagatctagagaatcccctgaaaaa 867 Query: 540 aataaaagaccaccacttcctcctaaccctgcggagaacttcatagtcatctccagtatc 599 |||||||||||||| | ||| || |||| | || ||||||||| || |||||||| || Sbjct: 866 cataaaagaccaccagtgccttctgacccgcctgaaaacttcatattcttctccagtttc 807 Query: 600 atcatccccatactcaatcacatagtctccaagaacgataccattaggaacttgtgcatg 659 |||||||||||||||||| ||||| ||||| ||||| || |||||||||||||||||||| Sbjct: 806 atcatccccatactcaatgacataatctcccagaacaattccattaggaacttgtgcatg 747 Query: 660 tattgtgctca 670 || ||||||| Sbjct: 746 aatcgtgctca 736
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 111 bits (56), Expect = 3e-21 Identities = 107/124 (86%) Strand = Plus / Plus Query: 549 ccaccacttcctcctaaccctgcggagaacttcatagtcatctccagtatcatcatcccc 608 |||||| |||| |||||||||| || |||||||||||||||||| | ||||||||| || Sbjct: 2805354 ccaccagttccccctaaccctgtggtaaacttcatagtcatctccggcatcatcatcacc 2805413 Query: 609 atactcaatcacatagtctccaagaacgataccattaggaacttgtgcatgtattgtgct 668 ||||| || ||||||||||| | ||| ||||||||||| || ||||||||||| ||||| Sbjct: 2805414 gtactcgatgacatagtctcccaaaactataccattaggcacctgtgcatgtatcgtgct 2805473 Query: 669 caag 672 |||| Sbjct: 2805474 caag 2805477 Score = 61.9 bits (31), Expect = 3e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 367 tcatcatcgatttcatcaaatctgatttccctcaggtcaacag 409 |||||||| ||||||||||||||||||||||| | |||||||| Sbjct: 2805169 tcatcatctatttcatcaaatctgatttcccttatgtcaacag 2805211
>dbj|AP005412.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0050G13 Length = 150685 Score = 111 bits (56), Expect = 3e-21 Identities = 107/124 (86%) Strand = Plus / Plus Query: 549 ccaccacttcctcctaaccctgcggagaacttcatagtcatctccagtatcatcatcccc 608 |||||| |||| |||||||||| || |||||||||||||||||| | ||||||||| || Sbjct: 73582 ccaccagttccccctaaccctgtggtaaacttcatagtcatctccggcatcatcatcacc 73641 Query: 609 atactcaatcacatagtctccaagaacgataccattaggaacttgtgcatgtattgtgct 668 ||||| || ||||||||||| | ||| ||||||||||| || ||||||||||| ||||| Sbjct: 73642 gtactcgatgacatagtctcccaaaactataccattaggcacctgtgcatgtatcgtgct 73701 Query: 669 caag 672 |||| Sbjct: 73702 caag 73705 Score = 61.9 bits (31), Expect = 3e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 367 tcatcatcgatttcatcaaatctgatttccctcaggtcaacag 409 |||||||| ||||||||||||||||||||||| | |||||||| Sbjct: 73397 tcatcatctatttcatcaaatctgatttcccttatgtcaacag 73439
>dbj|AK121424.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023134D10, full insert sequence Length = 1817 Score = 111 bits (56), Expect = 3e-21 Identities = 107/124 (86%) Strand = Plus / Minus Query: 549 ccaccacttcctcctaaccctgcggagaacttcatagtcatctccagtatcatcatcccc 608 |||||| |||| |||||||||| || |||||||||||||||||| | ||||||||| || Sbjct: 1212 ccaccagttccccctaaccctgtggtaaacttcatagtcatctccggcatcatcatcacc 1153 Query: 609 atactcaatcacatagtctccaagaacgataccattaggaacttgtgcatgtattgtgct 668 ||||| || ||||||||||| | ||| ||||||||||| || ||||||||||| ||||| Sbjct: 1152 gtactcgatgacatagtctcccaaaactataccattaggcacctgtgcatgtatcgtgct 1093 Query: 669 caag 672 |||| Sbjct: 1092 caag 1089 Score = 61.9 bits (31), Expect = 3e-06 Identities = 40/43 (93%) Strand = Plus / Minus Query: 367 tcatcatcgatttcatcaaatctgatttccctcaggtcaacag 409 |||||||| ||||||||||||||||||||||| | |||||||| Sbjct: 1397 tcatcatctatttcatcaaatctgatttcccttatgtcaacag 1355
>dbj|AK067206.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013095D10, full insert sequence Length = 1479 Score = 111 bits (56), Expect = 3e-21 Identities = 107/124 (86%) Strand = Plus / Minus Query: 549 ccaccacttcctcctaaccctgcggagaacttcatagtcatctccagtatcatcatcccc 608 |||||| |||| |||||||||| || |||||||||||||||||| | ||||||||| || Sbjct: 951 ccaccagttccccctaaccctgtggtaaacttcatagtcatctccggcatcatcatcacc 892 Query: 609 atactcaatcacatagtctccaagaacgataccattaggaacttgtgcatgtattgtgct 668 ||||| || ||||||||||| | ||| ||||||||||| || ||||||||||| ||||| Sbjct: 891 gtactcgatgacatagtctcccaaaactataccattaggcacctgtgcatgtatcgtgct 832 Query: 669 caag 672 |||| Sbjct: 831 caag 828 Score = 61.9 bits (31), Expect = 3e-06 Identities = 40/43 (93%) Strand = Plus / Minus Query: 367 tcatcatcgatttcatcaaatctgatttccctcaggtcaacag 409 |||||||| ||||||||||||||||||||||| | |||||||| Sbjct: 1136 tcatcatctatttcatcaaatctgatttcccttatgtcaacag 1094
>dbj|AK064982.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001C12, full insert sequence Length = 1762 Score = 111 bits (56), Expect = 3e-21 Identities = 107/124 (86%) Strand = Plus / Minus Query: 549 ccaccacttcctcctaaccctgcggagaacttcatagtcatctccagtatcatcatcccc 608 |||||| |||| |||||||||| || |||||||||||||||||| | ||||||||| || Sbjct: 1158 ccaccagttccccctaaccctgtggtaaacttcatagtcatctccggcatcatcatcacc 1099 Query: 609 atactcaatcacatagtctccaagaacgataccattaggaacttgtgcatgtattgtgct 668 ||||| || ||||||||||| | ||| ||||||||||| || ||||||||||| ||||| Sbjct: 1098 gtactcgatgacatagtctcccaaaactataccattaggcacctgtgcatgtatcgtgct 1039 Query: 669 caag 672 |||| Sbjct: 1038 caag 1035 Score = 61.9 bits (31), Expect = 3e-06 Identities = 40/43 (93%) Strand = Plus / Minus Query: 367 tcatcatcgatttcatcaaatctgatttccctcaggtcaacag 409 |||||||| ||||||||||||||||||||||| | |||||||| Sbjct: 1343 tcatcatctatttcatcaaatctgatttcccttatgtcaacag 1301
>dbj|AP004913.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT02A14, TM0072a, complete sequence Length = 100740 Score = 50.1 bits (25), Expect = 0.010 Identities = 31/33 (93%) Strand = Plus / Plus Query: 597 atcatcatccccatactcaatcacatagtctcc 629 ||||||||||||||| ||||||||||| ||||| Sbjct: 76215 atcatcatccccatattcaatcacataatctcc 76247
>gb|AY617717.1| Sterkiella histriomuscorum clone UGC1O0005_D18_R genomic sequence Length = 649 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 497 ctcttcttcgacttcttggata 518 |||||||||||||||||||||| Sbjct: 308 ctcttcttcgacttcttggata 287
>gb|AC102151.8| Mus musculus chromosome 18, clone RP23-312L17, complete sequence Length = 175398 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 484 tcccttcctctccctcttcttc 505 |||||||||||||||||||||| Sbjct: 57390 tcccttcctctccctcttcttc 57411
>gb|AC125191.4| Mus musculus BAC clone RP23-262C22 from 16, complete sequence Length = 196580 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 484 tcccttcctctccctcttcttc 505 |||||||||||||||||||||| Sbjct: 66652 tcccttcctctccctcttcttc 66631
>ref|XM_788736.1| PREDICTED: Strongylocentrotus purpuratus similar to Ran binding protein 11 (LOC589080), mRNA Length = 2910 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 363 gtactcatcatcgatttcatca 384 |||||||||||||||||||||| Sbjct: 2721 gtactcatcatcgatttcatca 2700
>emb|AL442043.1|NCB11E6 Neurospora crassa DNA linkage group II BAC clone B11E6 Length = 69943 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 484 tcccttcctctccctcttcttc 505 |||||||||||||||||||||| Sbjct: 34031 tcccttcctctccctcttcttc 34010
>gb|AC007595.9| Homo sapiens chromosome 16 clone RP11-109M19, complete sequence Length = 186303 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 484 tcccttcctctccctcttcttc 505 |||||||||||||||||||||| Sbjct: 50078 tcccttcctctccctcttcttc 50057
>gb|AC067939.1|AC067939 Neurospora crassa chromosome 7, clone G7-G3, complete sequence Length = 38230 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 484 tcccttcctctccctcttcttc 505 |||||||||||||||||||||| Sbjct: 33588 tcccttcctctccctcttcttc 33567
>gb|AC067938.1|AC067938 Neurospora crassa chromosome 7, clone G21-F8, complete sequence Length = 37068 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 484 tcccttcctctccctcttcttc 505 |||||||||||||||||||||| Sbjct: 14718 tcccttcctctccctcttcttc 14697
>ref|NM_179149.1| Arabidopsis thaliana unknown protein AT4G31410 transcript variant AT4G31410.2 mRNA, complete cds Length = 1416 Score = 42.1 bits (21), Expect = 2.3 Identities = 36/41 (87%) Strand = Plus / Minus Query: 586 tcatctccagtatcatcatccccatactcaatcacatagtc 626 |||||||| || |||||||| ||||| || ||||||||||| Sbjct: 825 tcatctcctgtgtcatcatctccatattcgatcacatagtc 785
>ref|NM_119290.3| Arabidopsis thaliana unknown protein AT4G31410 transcript variant AT4G31410.1 mRNA, complete cds Length = 1431 Score = 42.1 bits (21), Expect = 2.3 Identities = 36/41 (87%) Strand = Plus / Minus Query: 586 tcatctccagtatcatcatccccatactcaatcacatagtc 626 |||||||| || |||||||| ||||| || ||||||||||| Sbjct: 839 tcatctcctgtgtcatcatctccatattcgatcacatagtc 799
>gb|AC152949.1| Mus musculus 10 BAC RP23-184H3 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 206898 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 225 tcgcggctgcaaatccctttc 245 ||||||||||||||||||||| Sbjct: 43039 tcgcggctgcaaatccctttc 43059
>gb|AC165964.3| Mus musculus BAC clone RP23-334H24 from chromosome 8, complete sequence Length = 233538 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 485 cccttcctctccctcttcttc 505 ||||||||||||||||||||| Sbjct: 178515 cccttcctctccctcttcttc 178535
>gb|AC153518.14| Mus musculus 10 BAC RP23-426B18 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 160531 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 225 tcgcggctgcaaatccctttc 245 ||||||||||||||||||||| Sbjct: 144708 tcgcggctgcaaatccctttc 144728
>emb|AL451074.13| Human DNA sequence from clone RP11-466F5 on chromosome 1 Contains the 3' end of the MGST3 gene for microsomal glutathione S-transferase 3, the ALDH9A1 gene for aldehyde dehydrogenase 9 family (member A1), a ribosomal protein S13 (RPS13) pseudogene, a ribosomal protein L21 (RPL21) pseudogene, two novel genes (FLJ42974), a carbonic anhydrase XIV (CA14) pseudogene, the gene for putative membrane protein (LOC54499), a ribosomal protein L26 (RPL26) pseudogene, the 5' end of (tbc), the 5' end of the UMPK gene for uridine monophosphate kinase and two CpG islands, complete sequence Length = 188217 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 484 tcccttcctctccctcttctt 504 ||||||||||||||||||||| Sbjct: 101522 tcccttcctctccctcttctt 101502
>emb|BX883051.1| Rattus norvegicus chromosome 20, major histocompatibility complex, assembled from 40 BACs, strain Brown Norway (BN/ssNHsd), RT1n haplotype; segment 10/11 Length = 348946 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 485 cccttcctctccctcttcttc 505 ||||||||||||||||||||| Sbjct: 255191 cccttcctctccctcttcttc 255211
>emb|AL080283.1|ATF3L17 Arabidopsis thaliana DNA chromosome 4, BAC clone F3L17 (ESSA project) Length = 94319 Score = 42.1 bits (21), Expect = 2.3 Identities = 36/41 (87%) Strand = Plus / Minus Query: 586 tcatctccagtatcatcatccccatactcaatcacatagtc 626 |||||||| || |||||||| ||||| || ||||||||||| Sbjct: 22760 tcatctcctgtgtcatcatctccatattcgatcacatagtc 22720
>emb|AL161579.2|ATCHRIV75 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 75 Length = 196242 Score = 42.1 bits (21), Expect = 2.3 Identities = 36/41 (87%) Strand = Plus / Minus Query: 586 tcatctccagtatcatcatccccatactcaatcacatagtc 626 |||||||| || |||||||| ||||| || ||||||||||| Sbjct: 10825 tcatctcctgtgtcatcatctccatattcgatcacatagtc 10785
>emb|AL021633.2|ATF8F16 Arabidopsis thaliana DNA chromosome 4, BAC clone F8F16 (ESSA project) Length = 93038 Score = 42.1 bits (21), Expect = 2.3 Identities = 36/41 (87%) Strand = Plus / Minus Query: 586 tcatctccagtatcatcatccccatactcaatcacatagtc 626 |||||||| || |||||||| ||||| || ||||||||||| Sbjct: 84643 tcatctcctgtgtcatcatctccatattcgatcacatagtc 84603
>gb|AY097353.1| Arabidopsis thaliana AT4g31410/F8F16_230 mRNA, complete cds Length = 927 Score = 42.1 bits (21), Expect = 2.3 Identities = 36/41 (87%) Strand = Plus / Minus Query: 586 tcatctccagtatcatcatccccatactcaatcacatagtc 626 |||||||| || |||||||| ||||| || ||||||||||| Sbjct: 623 tcatctcctgtgtcatcatctccatattcgatcacatagtc 583
>gb|AY074848.1| Arabidopsis thaliana AT4g31410/F8F16_230 mRNA, complete cds Length = 1359 Score = 42.1 bits (21), Expect = 2.3 Identities = 36/41 (87%) Strand = Plus / Minus Query: 586 tcatctccagtatcatcatccccatactcaatcacatagtc 626 |||||||| || |||||||| ||||| || ||||||||||| Sbjct: 767 tcatctcctgtgtcatcatctccatattcgatcacatagtc 727
>emb|BX826532.1|CNS0A3CG Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB36ZC03 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1287 Score = 42.1 bits (21), Expect = 2.3 Identities = 36/41 (87%) Strand = Plus / Minus Query: 586 tcatctccagtatcatcatccccatactcaatcacatagtc 626 |||||||| || |||||||| ||||| || ||||||||||| Sbjct: 803 tcatctcctgtgtcatcatctccatattcgatcacatagtc 763
>emb|BX826384.1|CNS0A3CI Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB20ZB12 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1309 Score = 42.1 bits (21), Expect = 2.3 Identities = 36/41 (87%) Strand = Plus / Minus Query: 586 tcatctccagtatcatcatccccatactcaatcacatagtc 626 |||||||| || |||||||| ||||| || ||||||||||| Sbjct: 760 tcatctcctgtgtcatcatctccatattcgatcacatagtc 720
>emb|BX827199.1|CNS0A2RA Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS21ZB02 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1320 Score = 42.1 bits (21), Expect = 2.3 Identities = 36/41 (87%) Strand = Plus / Minus Query: 586 tcatctccagtatcatcatccccatactcaatcacatagtc 626 |||||||| || |||||||| ||||| || ||||||||||| Sbjct: 839 tcatctcctgtgtcatcatctccatattcgatcacatagtc 799
>gb|AY085434.1| Arabidopsis thaliana clone 151518 mRNA, complete sequence Length = 1356 Score = 42.1 bits (21), Expect = 2.3 Identities = 36/41 (87%) Strand = Plus / Minus Query: 586 tcatctccagtatcatcatccccatactcaatcacatagtc 626 |||||||| || |||||||| ||||| || ||||||||||| Sbjct: 767 tcatctcctgtgtcatcatctccatattcgatcacatagtc 727
>gb|AC137708.16| Mus musculus chromosome 3, clone RP24-277H8, complete sequence Length = 154779 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 477 tctattgtcccttcctctccctcttcttc 505 |||||| ||||||||||| |||||||||| Sbjct: 64505 tctattttcccttcctcttcctcttcttc 64477
>gb|AC132321.2| Mus musculus BAC clone RP24-261H23 from 8, complete sequence Length = 173138 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 485 cccttcctctccctcttcttc 505 ||||||||||||||||||||| Sbjct: 28042 cccttcctctccctcttcttc 28062
>emb|AL606746.17| Mouse DNA sequence from clone RP23-423J10 on chromosome 3, complete sequence Length = 203345 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 477 tctattgtcccttcctctccctcttcttc 505 |||||| ||||||||||| |||||||||| Sbjct: 2773 tctattttcccttcctcttcctcttcttc 2801
>emb|AL596062.13| Mouse DNA sequence from clone RP23-284O21 on chromosome 11, complete sequence Length = 155151 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 485 cccttcctctccctcttcttc 505 ||||||||||||||||||||| Sbjct: 89033 cccttcctctccctcttcttc 89013
>ref|NM_202792.1| Arabidopsis thaliana unknown protein AT4G08460 transcript variant AT4G08460.2 mRNA, complete cds Length = 1148 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 612 ctcaatcacatagtctccaa 631 |||||||||||||||||||| Sbjct: 700 ctcaatcacatagtctccaa 681
>ref|NM_116915.5| Arabidopsis thaliana unknown protein AT4G08460 transcript variant AT4G08460.1 mRNA, complete cds Length = 1282 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 612 ctcaatcacatagtctccaa 631 |||||||||||||||||||| Sbjct: 814 ctcaatcacatagtctccaa 795
>gb|AC163399.6| Mus musculus chromosome 18, clone RP24-66G13, complete sequence Length = 173868 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 484 tcccttcctctccctcttct 503 |||||||||||||||||||| Sbjct: 24486 tcccttcctctccctcttct 24467
>ref|XM_630998.1| Dictyostelium discoideum hypothetical protein (DDB0188553), partial mRNA Length = 3351 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 532 ttgcaacaaataaaagacca 551 |||||||||||||||||||| Sbjct: 2338 ttgcaacaaataaaagacca 2319
>gb|AC148001.6| Mus musculus BAC clone RP24-82P9 from chromosome 18, complete sequence Length = 181022 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 489 tcctctccctcttcttcgacttct 512 ||||||||||||||||| |||||| Sbjct: 136913 tcctctccctcttcttccacttct 136890
>gb|AC139042.18| Mus musculus chromosome 18, clone RP23-261C19, complete sequence Length = 195202 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 484 tcccttcctctccctcttct 503 |||||||||||||||||||| Sbjct: 101869 tcccttcctctccctcttct 101850
>gb|BC077929.1| Xenopus laevis amine oxidase, copper containing 2 (retina-specific), mRNA (cDNA clone MGC:80876 IMAGE:5515067), complete cds Length = 2475 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 241 ctttctttatcagctggttc 260 |||||||||||||||||||| Sbjct: 1252 ctttctttatcagctggttc 1271
>gb|BC058101.1| Mus musculus Unknown (protein for MGC:67181), mRNA (cDNA clone MGC:67181 IMAGE:6822264), complete cds Length = 4274 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 612 ctcaatcacatagtctccaa 631 |||||||||||||||||||| Sbjct: 1264 ctcaatcacatagtctccaa 1283
>gb|AC147638.2| Mus musculus BAC clone RP23-181L5 from chromosome 7, complete sequence Length = 196114 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 448 gcctgattgctgttcctccttcca 471 ||||||||||||||| |||||||| Sbjct: 165235 gcctgattgctgttcttccttcca 165212
>gb|AY588974.1| Conus leopardus alpha conotoxin LP1.5 mRNA, complete cds Length = 227 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 201 tttcctgatggctgcggcat 220 |||||||||||||||||||| Sbjct: 105 tttcctgatggctgcggcat 86
>gb|AF165141.4| Homo sapiens chromosome 8 clone XX-224L15 map 8q21.13, complete sequence Length = 46919 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 486 ccttcctctccctcttcttc 505 |||||||||||||||||||| Sbjct: 39174 ccttcctctccctcttcttc 39193
>gb|AC084697.4| Homo sapiens chromosome 8 clone XX-6L9 map q21.13, complete sequence Length = 107517 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 486 ccttcctctccctcttcttc 505 |||||||||||||||||||| Sbjct: 64238 ccttcctctccctcttcttc 64257
>emb|CT009539.5| Mouse DNA sequence from clone RP23-10G6 on chromosome 14, complete sequence Length = 170619 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 460 ttcctccttccacttcctct 479 |||||||||||||||||||| Sbjct: 166261 ttcctccttccacttcctct 166242
>gb|AC117223.3| Mus musculus BAC clone RP23-348B1 from chromosome 2, complete sequence Length = 183972 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 103 tttctgttgctactttttat 122 |||||||||||||||||||| Sbjct: 2913 tttctgttgctactttttat 2932
>gb|AC098727.3| Mus musculus BAC clone RP23-3H16 from 4, complete sequence Length = 231302 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 486 ccttcctctccctcttcttc 505 |||||||||||||||||||| Sbjct: 55589 ccttcctctccctcttcttc 55608
>gb|AC095044.3| Homo sapiens BAC clone RP11-132B16 from 7, complete sequence Length = 134184 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 457 ctgttcctccttccacttcc 476 |||||||||||||||||||| Sbjct: 120988 ctgttcctccttccacttcc 120969
>gb|AC009500.2| Homo sapiens BAC clone RP11-511A20 from 7, complete sequence Length = 54554 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 agggtttctgttgctacttt 118 |||||||||||||||||||| Sbjct: 4425 agggtttctgttgctacttt 4444
>gb|AC107367.13| Mus musculus chromosome 3, clone RP23-331D18, complete sequence Length = 204398 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 475 cctctattgtcccttcctct 494 |||||||||||||||||||| Sbjct: 90807 cctctattgtcccttcctct 90788
>emb|AL591890.31| Human DNA sequence from clone RP11-54A22 on chromosome 9 Contains three novel genes, and the 5' end of the COL5A1 gene for collagen (type V) alpha 1, and a CpG island, complete sequence Length = 173415 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 atcagctggttctatcaggt 268 |||||||||||||||||||| Sbjct: 17919 atcagctggttctatcaggt 17900
>emb|AL391421.27| Human DNA sequence from clone RP11-126H7 on chromosome 10 Contains the 5' end of the DLG5 gene for discs large (Drosophila) homolog 5 (DLG5) (P-dlg, KIAA0583), a H2A histone family member Z (H2AFZ) pseudogene, a novel gene, the 3' end of the gene for polymerase (RNA) III (DNA directed) (155kD) (RPC155) and a CpG island, complete sequence Length = 168239 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 573 gagaacttcatagtcatctc 592 |||||||||||||||||||| Sbjct: 11082 gagaacttcatagtcatctc 11063
>emb|AL136960.4| Human DNA sequence from clone RP11-174I10 on chromosome 13 Contains the 3' end of the RB1 gene for retinoblastoma 1 (including osteosarcoma) and the 5' end of a novel gene, complete sequence Length = 62825 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 465 ccttccacttcctctattgt 484 |||||||||||||||||||| Sbjct: 11228 ccttccacttcctctattgt 11247
>gb|AY096463.1| Arabidopsis thaliana unknown protein (At4g08460) mRNA, complete cds Length = 855 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 612 ctcaatcacatagtctccaa 631 |||||||||||||||||||| Sbjct: 612 ctcaatcacatagtctccaa 593
>gb|AY074362.1| Arabidopsis thaliana unknown protein (At4g08460) mRNA, complete cds Length = 1168 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 612 ctcaatcacatagtctccaa 631 |||||||||||||||||||| Sbjct: 700 ctcaatcacatagtctccaa 681
>gb|AY130829.1| Hevea brasiliensis thymidine kinase-like protein gene, partial sequence Length = 2017 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 285 accatatcttgtatccctgt 304 |||||||||||||||||||| Sbjct: 1095 accatatcttgtatccctgt 1076
>gb|AC090255.4| Homo sapiens chromosome 8, clone RP11-34M16, complete sequence Length = 145705 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 486 ccttcctctccctcttcttc 505 |||||||||||||||||||| Sbjct: 50851 ccttcctctccctcttcttc 50870
>gb|AC151830.3| Mus musculus BAC clone RP24-76I23 from chromosome 7, complete sequence Length = 212931 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 448 gcctgattgctgttcctccttcca 471 ||||||||||||||| |||||||| Sbjct: 118613 gcctgattgctgttcttccttcca 118590
>emb|AL627222.10| Mouse DNA sequence from clone RP23-265A5 on chromosome 11 Contains a novel gene, the Tac4 gene for tachykinin, the Myst2 gene for MYST histone acetyltransferase 2, two novel genes, the 5' end of the gene for the likely ortholog of H. sapiens C/EBP-induced protein (5730593F17Rik) and a CpG island, complete sequence Length = 185645 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 485 cccttcctctccctcttctt 504 |||||||||||||||||||| Sbjct: 181684 cccttcctctccctcttctt 181703
>emb|AL162758.2|NMA7Z2491 Neisseria meningitidis serogroup A strain Z2491 complete genome; segment 7/7 Length = 195767 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 ggcggcggagggtttctgtt 110 |||||||||||||||||||| Sbjct: 4123 ggcggcggagggtttctgtt 4142
>emb|AL161511.2|ATCHRIV23 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 23 Length = 197306 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 612 ctcaatcacatagtctccaa 631 |||||||||||||||||||| Sbjct: 151395 ctcaatcacatagtctccaa 151414
>emb|AJ238521.1|ATH238521 Arabidopsis thaliana csd2 gene, exons 1-8, ecotype Ler Length = 1756 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 236 aatccctttctttatcagct 255 |||||||||||||||||||| Sbjct: 547 aatccctttctttatcagct 528
>emb|AL607126.9| Mouse DNA sequence from clone RP23-206I16 on chromosome 11, complete sequence Length = 221930 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 492 tctccctcttcttcgacttc 511 |||||||||||||||||||| Sbjct: 19374 tctccctcttcttcgacttc 19355
>emb|AL591429.9| Mouse DNA sequence from clone RP23-307I20 on chromosome 11 Contains a novel gene, complete sequence Length = 149879 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 485 cccttcctctccctcttctt 504 |||||||||||||||||||| Sbjct: 23011 cccttcctctccctcttctt 22992
>emb|AL669859.5| Mouse DNA sequence from clone RP23-167D6 on chromosome 11, complete sequence Length = 155196 Score = 40.1 bits (20), Expect = 9.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 229 ggctgcaaatccctttctttatcagctg 256 ||||||||| | |||||||||||||||| Sbjct: 74654 ggctgcaaacctctttctttatcagctg 74681
>gb|AF352033.1| Homo sapiens DLG5 gene, exons 2 through 32 and complete cds Length = 82500 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 573 gagaacttcatagtcatctc 592 |||||||||||||||||||| Sbjct: 56100 gagaacttcatagtcatctc 56119
>gb|DQ445140.1| Beta vulgaris chromosome 9 clone BAC137 genomic sequence Length = 13776 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 491 ctctccctcttcttcgacttcttg 514 ||||||||||| |||||||||||| Sbjct: 9640 ctctccctcttgttcgacttcttg 9663
>dbj|AB230083.1| Aspergillus oryzae cDNA, contig sequence: AoEST6970 Length = 290 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 128 ggaagtctggggctggggcg 147 |||||||||||||||||||| Sbjct: 192 ggaagtctggggctggggcg 173
>dbj|AB228275.1| Aspergillus oryzae cDNA, contig sequence: AoEST5148 Length = 421 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 286 ccatatcttgtatccctgta 305 |||||||||||||||||||| Sbjct: 305 ccatatcttgtatccctgta 324
>gb|AC021915.11| Homo sapiens chromosome 8, clone RP11-26M5, complete sequence Length = 183101 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 ttttcaccagcatcactttt 23 |||||||||||||||||||| Sbjct: 154320 ttttcaccagcatcactttt 154301
>dbj|AP007174.1| Aspergillus oryzae RIB40 genomic DNA, SC103 Length = 1282697 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 286 ccatatcttgtatccctgta 305 |||||||||||||||||||| Sbjct: 72991 ccatatcttgtatccctgta 73010
>dbj|AP007151.1| Aspergillus oryzae RIB40 genomic DNA, SC005 Length = 4429080 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 128 ggaagtctggggctggggcg 147 |||||||||||||||||||| Sbjct: 2768381 ggaagtctggggctggggcg 2768400
>gb|AC112713.3| Homo sapiens BAC clone RP11-175H11 from 4, complete sequence Length = 114398 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 110 tgctactttttatgcacagg 129 |||||||||||||||||||| Sbjct: 70901 tgctactttttatgcacagg 70882
>gb|AC005851.3| Arabidopsis thaliana chromosome 2 clone F24D13 map B68, complete sequence Length = 91261 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 236 aatccctttctttatcagct 255 |||||||||||||||||||| Sbjct: 10131 aatccctttctttatcagct 10150
>gb|AF452637.1| Mus musculus distal-less homeo box 7 (Dlx7) and distal-less homeo box 3 (Dlx3) genes, complete cds Length = 78651 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 485 cccttcctctccctcttctt 504 |||||||||||||||||||| Sbjct: 399 cccttcctctccctcttctt 418
>gb|AC156796.2| Mus musculus BAC clone RP24-90N20 from chromosome 9, complete sequence Length = 204185 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 486 ccttcctctccctcttcttc 505 |||||||||||||||||||| Sbjct: 126660 ccttcctctccctcttcttc 126641
>gb|DQ059095.1| Arabidopsis thaliana RING domain protein (At4g08460) mRNA, complete cds Length = 825 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 612 ctcaatcacatagtctccaa 631 |||||||||||||||||||| Sbjct: 612 ctcaatcacatagtctccaa 593
>gb|AE002098.2| Neisseria meningitidis MC58, complete genome Length = 2272360 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 ggcggcggagggtttctgtt 110 |||||||||||||||||||| Sbjct: 449924 ggcggcggagggtttctgtt 449905
>gb|AC103831.4| Homo sapiens chromosome 8, clone RP11-1023P17, complete sequence Length = 206357 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 4 ttttcaccagcatcactttt 23 |||||||||||||||||||| Sbjct: 185799 ttttcaccagcatcactttt 185818
>emb|BX827879.1|CNS0A3W8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH30ZC08 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1099 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 612 ctcaatcacatagtctccaa 631 |||||||||||||||||||| Sbjct: 677 ctcaatcacatagtctccaa 658
>emb|AL772181.23| Mouse DNA sequence from clone RP23-118H3 on chromosome 2, complete sequence Length = 219704 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 103 tttctgttgctactttttat 122 |||||||||||||||||||| Sbjct: 2913 tttctgttgctactttttat 2932
>gb|AC154845.2| Mus musculus BAC clone RP23-48E18 from chromosome 14, complete sequence Length = 211129 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 460 ttcctccttccacttcctct 479 |||||||||||||||||||| Sbjct: 28151 ttcctccttccacttcctct 28132
>gb|AC079304.6| Homo sapiens BAC clone RP11-389K20 from 2, complete sequence Length = 188132 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 580 tcatagtcatctccagtatcatca 603 ||||||||||| |||||||||||| Sbjct: 70708 tcatagtcatcgccagtatcatca 70685
>gb|AC010000.5|AC010000 Homo sapiens chromosome 8 clone RP11-34M16, complete sequence Length = 145588 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 486 ccttcctctccctcttcttc 505 |||||||||||||||||||| Sbjct: 50735 ccttcctctccctcttcttc 50754
>ref|NM_198619.1| Mus musculus Unknown (protein for MGC:67181) (MGC67181), mRNA Length = 4274 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 612 ctcaatcacatagtctccaa 631 |||||||||||||||||||| Sbjct: 1264 ctcaatcacatagtctccaa 1283
>dbj|AP001838.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-718B20, complete sequences Length = 211652 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 485 cccttcctctccctcttctt 504 |||||||||||||||||||| Sbjct: 90346 cccttcctctccctcttctt 90365
>dbj|AP003059.2| Homo sapiens genomic DNA, chromosome 11q, clone:CTD-2005H7, complete sequence Length = 89000 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 484 tcccttcctctccctcttct 503 |||||||||||||||||||| Sbjct: 70319 tcccttcctctccctcttct 70338
>emb|AL844511.14| Mouse DNA sequence from clone RP23-244B6 on chromosome 2, complete sequence Length = 144077 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 483 gtcccttcctctccctcttc 502 |||||||||||||||||||| Sbjct: 118912 gtcccttcctctccctcttc 118931
>gb|AC005513.1|AC005513 Homo sapiens chromosome 19, cosmid R27415, complete sequence Length = 37001 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 485 cccttcctctccctcttctt 504 |||||||||||||||||||| Sbjct: 15584 cccttcctctccctcttctt 15603
>gb|AF076275.1|T15F16 Arabidopsis thaliana BAC T15F16 Length = 97494 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 612 ctcaatcacatagtctccaa 631 |||||||||||||||||||| Sbjct: 92826 ctcaatcacatagtctccaa 92807
>emb|AL954131.8| Mouse DNA sequence from clone RP23-32H12 on chromosome 2, complete sequence Length = 162456 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 471 acttcctctattgtcccttcctct 494 ||||||||||||||| |||||||| Sbjct: 74185 acttcctctattgtctcttcctct 74162
>emb|AL691475.18| Mouse DNA sequence from clone RP23-264P11 on chromosome 4 Contains part of the Astn2 gene for astrotactin 2 and a CpG island, complete sequence Length = 174567 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 486 ccttcctctccctcttcttc 505 |||||||||||||||||||| Sbjct: 94211 ccttcctctccctcttcttc 94230
>emb|AL607066.23| Mouse DNA sequence from clone RP23-406N5 on chromosome 4, complete sequence Length = 194837 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 612 ctcaatcacatagtctccaa 631 |||||||||||||||||||| Sbjct: 35624 ctcaatcacatagtctccaa 35605
>emb|AL627072.17| Mouse DNA sequence from clone RP23-432B19 on chromosome 4, complete sequence Length = 208805 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 202 ttcctgatggctgcggcatc 221 |||||||||||||||||||| Sbjct: 141728 ttcctgatggctgcggcatc 141747
>gb|L11910.1|HUMRETBLAS Human retinoblastoma susceptibility gene exons 1-27, complete cds Length = 180388 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 465 ccttccacttcctctattgt 484 |||||||||||||||||||| Sbjct: 133918 ccttccacttcctctattgt 133937
>gb|AF551763.1| Homo sapiens retinoblastoma 1 (including osteosarcoma) (RB1) and purinergic receptor (family A group 5) (P2Y5) genes, complete cds Length = 180782 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 465 ccttccacttcctctattgt 484 |||||||||||||||||||| Sbjct: 135022 ccttccacttcctctattgt 135041
>gb|AC011604.10| Homo sapiens 12p12-31.7-37.2 BAC RP11-80N2 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 175606 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 482 tgtcccttcctctccctctt 501 |||||||||||||||||||| Sbjct: 154191 tgtcccttcctctccctctt 154210
>emb|AL671869.11| Mouse DNA sequence from clone RP23-61O18 on chromosome 4, complete sequence Length = 61624 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 481 ttgtcccttcctctccctcttctt 504 ||||||||||||||||||| |||| Sbjct: 41018 ttgtcccttcctctccctcctctt 41041 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,495,039 Number of Sequences: 3902068 Number of extensions: 6495039 Number of successful extensions: 137723 Number of sequences better than 10.0: 106 Number of HSP's better than 10.0 without gapping: 106 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 137294 Number of HSP's gapped (non-prelim): 423 length of query: 672 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 649 effective length of database: 17,143,297,704 effective search space: 11126000209896 effective search space used: 11126000209896 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)