ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd16i13 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY596527.1| Saccharum officinarum clone SCCCLB1004G11, complete sequence Length = 1189 Score = 381 bits (192), Expect = e-102 Identities = 324/368 (88%) Strand = Plus / Plus Query: 265 tcctcgtcctggtgagcaactttcttccgcaacactttctcaaaatcaatcttttccacg 324 ||||| ||||||||||||| ||||| |||||||| |||||||| ||||||||||| | Sbjct: 325 tcctcatcctggtgagcaaacttcttgcgcaacaccttctcaaactcaatcttttcaaga 384 Query: 325 ggcttggcattctcaacagcgtgtgccttggctaagttggaatagttggcagccgactcc 384 ||||||||||||||| |||| || ||||||| | |||||||||||||||| |||||| Sbjct: 385 ggcttggcattctcatcagcatgcgccttggacagactggaatagttggcagctgactcc 444 Query: 385 gctataaaagcaatctcctcatctgtgagcttcctcagaaatttcgctgggtttccaccc 444 || |||||||| ||||| |||||||||||||||||||||||||| || ||||| |||||| Sbjct: 445 gcaataaaagcgatctcgtcatctgtgagcttcctcagaaatttggcggggttcccaccc 504 Query: 445 catacctctccacaagggatccttgtattctgtcttacaagggctccggcagcaaccatc 504 ||||||||||||||||||||||| |||||||||| ||| |||||||| ||||| |||||| Sbjct: 505 catacctctccacaagggatcctagtattctgtcgtacgagggctccagcagctaccatc 564 Query: 505 ccatgcttttctacaacaacaccatctaacagggttgctcccataccaacaaaagcttca 564 || |||||||| ||||| ||||||||||| |||||||| ||||| ||||||||||| ||| Sbjct: 565 ccgtgcttttcaacaacgacaccatctaatagggttgcccccatgccaacaaaagcctca 624 Query: 565 tcctcaacagtgcatccttgtaatacagcactatgtcctactgtgacattgtctccaatg 624 |||||||| |||||||||||||| ||||||||||| ||||||||||| || | |||||| Sbjct: 625 tcctcaaccgtgcatccttgtaacacagcactatgacctactgtgacgttattgccaatg 684 Query: 625 atggttgg 632 || ||||| Sbjct: 685 attgttgg 692 Score = 46.1 bits (23), Expect = 0.14 Identities = 41/46 (89%), Gaps = 1/46 (2%) Strand = Plus / Plus Query: 31 aagtgcatggtcagctttagnaacattgctcgacccaaaattattg 76 |||||||||| |||||||| ||||| ||||||||||| ||||||| Sbjct: 90 aagtgcatggccagcttta-taacatcgctcgacccaagattattg 134
>dbj|AK122051.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033114G12, full insert sequence Length = 1036 Score = 363 bits (183), Expect = 5e-97 Identities = 360/419 (85%) Strand = Plus / Minus Query: 214 ggcgccagctctggagggacttcccgagtggcaccaagcatggaaccgtgttcctcgtcc 273 |||| |||||| |||| || |||||||| ||||||| ||| ||| |||||||||| ||| Sbjct: 872 ggcgtcagctccggagtaacctcccgagtagcaccaatcattgaatcgtgttcctcatcc 813 Query: 274 tggtgagcaactttcttccgcaacactttctcaaaatcaatcttttccacgggcttggca 333 ||||||||| ||||| || |||| |||||||| ||| ||||||| || ||||||||| Sbjct: 812 tggtgagcagacttcttgcggaacagcttctcaaattcagtcttttcaacaggcttggca 753 Query: 334 ttctcaacagcgtgtgccttggctaagttggaatagttggcagccgactccgctataaaa 393 |||||| |||| || ||||| || | |||||||||| | ||| || || ||||| Sbjct: 752 ttctcagcagcatgggcctttgccagagtggaatagttagaagctgattctttgataaac 693 Query: 394 gcaatctcctcatctgtgagcttcctcagaaatttcgctgggtttccaccccatacctct 453 | |||||| ||||| |||||||||||||| ||||| || |||||||| |||||||||||| Sbjct: 692 gtaatctcgtcatcagtgagcttcctcaggaatttggcagggtttcctccccatacctct 633 Query: 454 ccacaagggatccttgtattctgtcttacaagggctccggcagcaaccatcccatgcttt 513 ||||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||| Sbjct: 632 ccacaggggatccttgtgttctgtcttacaagggctccagcagcaaccatcccatgcttt 573 Query: 514 tctacaacaacaccatctaacagggttgctcccataccaacaaaagcttcatcctcaaca 573 || || |||||||||||||||||||| || |||||||||||||| ||||| ||||||||| Sbjct: 572 tccacgacaacaccatctaacagggtcgcccccataccaacaaatgcttcgtcctcaaca 513 Query: 574 gtgcatccttgtaatacagcactatgtcctactgtgacattgtctccaatgatggttgg 632 || ||||||||||||||||||||||| ||||||||||| || || |||||||||||||| Sbjct: 512 gtacatccttgtaatacagcactatgacctactgtgacgttatccccaatgatggttgg 454 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 57 tgctcgacccaaaattattg 76 |||||||||||||||||||| Sbjct: 1030 tgctcgacccaaaattattg 1011
>dbj|AK104205.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-304-F03, full insert sequence Length = 1086 Score = 363 bits (183), Expect = 5e-97 Identities = 360/419 (85%) Strand = Plus / Minus Query: 214 ggcgccagctctggagggacttcccgagtggcaccaagcatggaaccgtgttcctcgtcc 273 |||| |||||| |||| || |||||||| ||||||| ||| ||| |||||||||| ||| Sbjct: 922 ggcgtcagctccggagtaacctcccgagtagcaccaatcattgaatcgtgttcctcatcc 863 Query: 274 tggtgagcaactttcttccgcaacactttctcaaaatcaatcttttccacgggcttggca 333 ||||||||| ||||| || |||| |||||||| ||| ||||||| || ||||||||| Sbjct: 862 tggtgagcagacttcttgcggaacagcttctcaaattcagtcttttcaacaggcttggca 803 Query: 334 ttctcaacagcgtgtgccttggctaagttggaatagttggcagccgactccgctataaaa 393 |||||| |||| || ||||| || | |||||||||| | ||| || || ||||| Sbjct: 802 ttctcagcagcatgggcctttgccagagtggaatagttagaagctgattctttgataaac 743 Query: 394 gcaatctcctcatctgtgagcttcctcagaaatttcgctgggtttccaccccatacctct 453 | |||||| ||||| |||||||||||||| ||||| || |||||||| |||||||||||| Sbjct: 742 gtaatctcgtcatcagtgagcttcctcaggaatttggcagggtttcctccccatacctct 683 Query: 454 ccacaagggatccttgtattctgtcttacaagggctccggcagcaaccatcccatgcttt 513 ||||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||| Sbjct: 682 ccacaggggatccttgtgttctgtcttacaagggctccagcagcaaccatcccatgcttt 623 Query: 514 tctacaacaacaccatctaacagggttgctcccataccaacaaaagcttcatcctcaaca 573 || || |||||||||||||||||||| || |||||||||||||| ||||| ||||||||| Sbjct: 622 tccacgacaacaccatctaacagggtcgcccccataccaacaaatgcttcgtcctcaaca 563 Query: 574 gtgcatccttgtaatacagcactatgtcctactgtgacattgtctccaatgatggttgg 632 || ||||||||||||||||||||||| ||||||||||| || || |||||||||||||| Sbjct: 562 gtacatccttgtaatacagcactatgacctactgtgacgttatccccaatgatggttgg 504 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 57 tgctcgacccaaaattattg 76 |||||||||||||||||||| Sbjct: 1080 tgctcgacccaaaattattg 1061
>dbj|AK071713.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023109L19, full insert sequence Length = 1156 Score = 363 bits (183), Expect = 5e-97 Identities = 360/419 (85%) Strand = Plus / Minus Query: 214 ggcgccagctctggagggacttcccgagtggcaccaagcatggaaccgtgttcctcgtcc 273 |||| |||||| |||| || |||||||| ||||||| ||| ||| |||||||||| ||| Sbjct: 914 ggcgtcagctccggagtaacctcccgagtagcaccaatcattgaatcgtgttcctcatcc 855 Query: 274 tggtgagcaactttcttccgcaacactttctcaaaatcaatcttttccacgggcttggca 333 ||||||||| ||||| || |||| |||||||| ||| ||||||| || ||||||||| Sbjct: 854 tggtgagcagacttcttgcggaacagcttctcaaattcagtcttttcaacaggcttggca 795 Query: 334 ttctcaacagcgtgtgccttggctaagttggaatagttggcagccgactccgctataaaa 393 |||||| |||| || ||||| || | |||||||||| | ||| || || ||||| Sbjct: 794 ttctcagcagcatgggcctttgccagagtggaatagttagaagctgattctttgataaac 735 Query: 394 gcaatctcctcatctgtgagcttcctcagaaatttcgctgggtttccaccccatacctct 453 | |||||| ||||| |||||||||||||| ||||| || |||||||| |||||||||||| Sbjct: 734 gtaatctcgtcatcagtgagcttcctcaggaatttggcagggtttcctccccatacctct 675 Query: 454 ccacaagggatccttgtattctgtcttacaagggctccggcagcaaccatcccatgcttt 513 ||||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||| Sbjct: 674 ccacaggggatccttgtgttctgtcttacaagggctccagcagcaaccatcccatgcttt 615 Query: 514 tctacaacaacaccatctaacagggttgctcccataccaacaaaagcttcatcctcaaca 573 || || |||||||||||||||||||| || |||||||||||||| ||||| ||||||||| Sbjct: 614 tccacgacaacaccatctaacagggtcgcccccataccaacaaatgcttcgtcctcaaca 555 Query: 574 gtgcatccttgtaatacagcactatgtcctactgtgacattgtctccaatgatggttgg 632 || ||||||||||||||||||||||| ||||||||||| || || |||||||||||||| Sbjct: 554 gtacatccttgtaatacagcactatgacctactgtgacgttatccccaatgatggttgg 496 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 57 tgctcgacccaaaattattg 76 |||||||||||||||||||| Sbjct: 1072 tgctcgacccaaaattattg 1053
>dbj|AK060908.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-F08, full insert sequence Length = 1086 Score = 363 bits (183), Expect = 5e-97 Identities = 360/419 (85%) Strand = Plus / Minus Query: 214 ggcgccagctctggagggacttcccgagtggcaccaagcatggaaccgtgttcctcgtcc 273 |||| |||||| |||| || |||||||| ||||||| ||| ||| |||||||||| ||| Sbjct: 922 ggcgtcagctccggagtaacctcccgagtagcaccaatcattgaatcgtgttcctcatcc 863 Query: 274 tggtgagcaactttcttccgcaacactttctcaaaatcaatcttttccacgggcttggca 333 ||||||||| ||||| || |||| |||||||| ||| ||||||| || ||||||||| Sbjct: 862 tggtgagcagacttcttgcggaacagcttctcaaattcagtcttttcaacaggcttggca 803 Query: 334 ttctcaacagcgtgtgccttggctaagttggaatagttggcagccgactccgctataaaa 393 |||||| |||| || ||||| || | |||||||||| | ||| || || ||||| Sbjct: 802 ttctcagcagcatgggcctttgccagagtggaatagttagaagctgattctttgataaac 743 Query: 394 gcaatctcctcatctgtgagcttcctcagaaatttcgctgggtttccaccccatacctct 453 | |||||| ||||| |||||||||||||| ||||| || |||||||| |||||||||||| Sbjct: 742 gtaatctcgtcatcagtgagcttcctcaggaatttggcagggtttcctccccatacctct 683 Query: 454 ccacaagggatccttgtattctgtcttacaagggctccggcagcaaccatcccatgcttt 513 ||||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||| Sbjct: 682 ccacaggggatccttgtgttctgtcttacaagggctccagcagcaaccatcccatgcttt 623 Query: 514 tctacaacaacaccatctaacagggttgctcccataccaacaaaagcttcatcctcaaca 573 || || |||||||||||||||||||| || |||||||||||||| ||||| ||||||||| Sbjct: 622 tccacgacaacaccatctaacagggtcgcccccataccaacaaatgcttcgtcctcaaca 563 Query: 574 gtgcatccttgtaatacagcactatgtcctactgtgacattgtctccaatgatggttgg 632 || ||||||||||||||||||||||| ||||||||||| || || |||||||||||||| Sbjct: 562 gtacatccttgtaatacagcactatgacctactgtgacgttatccccaatgatggttgg 504 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 57 tgctcgacccaaaattattg 76 |||||||||||||||||||| Sbjct: 1080 tgctcgacccaaaattattg 1061
>gb|BT017158.1| Zea mays clone EL01N0368A12.c mRNA sequence Length = 1060 Score = 325 bits (164), Expect = 1e-85 Identities = 317/368 (86%) Strand = Plus / Minus Query: 265 tcctcgtcctggtgagcaactttcttccgcaacactttctcaaaatcaatcttttccacg 324 ||||| ||||||||||||| ||||| || ||||| |||||||| ||||||||||| | Sbjct: 800 tcctcatcctggtgagcaaacttcttgcgtaacaccttctcaaactcaatcttttcaaga 741 Query: 325 ggcttggcattctcaacagcgtgtgccttggctaagttggaatagttggcagccgactcc 384 |||||||||||||| |||| || |||||| | ||||||||||||| ||| || ||| Sbjct: 740 ggcttggcattctcggcagcatgcaccttggacagattggaatagttggaagctgattcc 681 Query: 385 gctataaaagcaatctcctcatctgtgagcttcctcagaaatttcgctgggtttccaccc 444 | ||||| || ||||| |||||||||||||||||||||||||| || ||||| || ||| Sbjct: 680 gtgataaatgcgatctcgtcatctgtgagcttcctcagaaatttggcagggttccctccc 621 Query: 445 catacctctccacaagggatccttgtattctgtcttacaagggctccggcagcaaccatc 504 ||||||||||||||||||||||| ||||||||||||||||||| ||| ||||| |||||| Sbjct: 620 catacctctccacaagggatcctagtattctgtcttacaagggatcctgcagctaccatc 561 Query: 505 ccatgcttttctacaacaacaccatctaacagggttgctcccataccaacaaaagcttca 564 ||||||||||| ||||| ||||||||||| |||||||| ||||| ||||||||||| ||| Sbjct: 560 ccatgcttttcaacaacgacaccatctaatagggttgcccccatgccaacaaaagcctca 501 Query: 565 tcctcaacagtgcatccttgtaatacagcactatgtcctactgtgacattgtctccaatg 624 |||||||| |||||||||||||| |||||||| || |||| |||||| || | |||||| Sbjct: 500 tcctcaaccgtgcatccttgtaacacagcactgtgacctattgtgacgttattaccaatg 441 Query: 625 atggttgg 632 || ||||| Sbjct: 440 attgttgg 433 Score = 46.1 bits (23), Expect = 0.14 Identities = 41/46 (89%), Gaps = 1/46 (2%) Strand = Plus / Minus Query: 31 aagtgcatggtcagctttagnaacattgctcgacccaaaattattg 76 |||||||||| |||||||| ||||| ||||||||||| ||||||| Sbjct: 1034 aagtgcatggccagcttta-taacatcgctcgacccaagattattg 990
>gb|AY105930.1| Zea mays PCO135569 mRNA sequence Length = 1279 Score = 303 bits (153), Expect = 4e-79 Identities = 294/341 (86%) Strand = Plus / Minus Query: 271 tcctggtgagcaactttcttccgcaacactttctcaaaatcaatcttttccacgggcttg 330 ||||||||||||| ||||| | |||||| |||||||| ||||||||||| | || ||| Sbjct: 838 tcctggtgagcaaacttcttgcccaacaccttctcaaactcaatcttttcaagaggtttg 779 Query: 331 gcattctcaacagcgtgtgccttggctaagttggaatagttggcagccgactccgctata 390 ||||||||| |||| || |||||| | ||||||||||||||||| || ||||| || Sbjct: 778 gcattctcagcagcatggaccttggacagattggaatagttggcagctgattccgcaatg 719 Query: 391 aaagcaatctcctcatctgtgagcttcctcagaaatttcgctgggtttccaccccatacc 450 ||| ||||| |||||||||||||||||||||||||| || ||||| || ||||||||| Sbjct: 718 aaactgatctcgtcatctgtgagcttcctcagaaatttggcagggttccctccccatacc 659 Query: 451 tctccacaagggatccttgtattctgtcttacaagggctccggcagcaaccatcccatgc 510 ||||||||||||||||| |||||||| | ||| |||||||| ||||| ||||| || ||| Sbjct: 658 tctccacaagggatcctagtattctgccgtacgagggctccagcagccaccattccgtgc 599 Query: 511 ttttctacaacaacaccatctaacagggttgctcccataccaacaaaagcttcatcctca 570 ||||| ||||||||||||||||| |||||||| || || ||||||||||| ||||||||| Sbjct: 598 ttttcaacaacaacaccatctaatagggttgccccaatgccaacaaaagcctcatcctca 539 Query: 571 acagtgcatccttgtaatacagcactatgtcctactgtgac 611 || |||||||||||||| ||||||||||| ||||||||||| Sbjct: 538 accgtgcatccttgtaacacagcactatgacctactgtgac 498
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 222 bits (112), Expect = 1e-54 Identities = 142/152 (93%) Strand = Plus / Minus Query: 448 acctctccacaagggatccttgtattctgtcttacaagggctccggcagcaaccatccca 507 ||||||||||| ||||||||||| |||||||||||||||||||| ||||||||||||||| Sbjct: 10121038 acctctccacaggggatccttgtgttctgtcttacaagggctccagcagcaaccatccca 10120979 Query: 508 tgcttttctacaacaacaccatctaacagggttgctcccataccaacaaaagcttcatcc 567 |||||||| || |||||||||||||||||||| || |||||||||||||| ||||| ||| Sbjct: 10120978 tgcttttccacgacaacaccatctaacagggtcgcccccataccaacaaatgcttcgtcc 10120919 Query: 568 tcaacagtgcatccttgtaatacagcactatg 599 |||||||| ||||||||||||||||||||||| Sbjct: 10120918 tcaacagtacatccttgtaatacagcactatg 10120887 Score = 115 bits (58), Expect = 2e-22 Identities = 193/238 (81%) Strand = Plus / Minus Query: 214 ggcgccagctctggagggacttcccgagtggcaccaagcatggaaccgtgttcctcgtcc 273 |||| |||||| |||| || |||||||| ||||||| ||| ||| |||||||||| ||| Sbjct: 10121590 ggcgtcagctccggagtaacctcccgagtagcaccaatcattgaatcgtgttcctcatcc 10121531 Query: 274 tggtgagcaactttcttccgcaacactttctcaaaatcaatcttttccacgggcttggca 333 ||||||||| ||||| || |||| |||||||| ||| ||||||| || ||||||||| Sbjct: 10121530 tggtgagcagacttcttgcggaacagcttctcaaattcagtcttttcaacaggcttggca 10121471 Query: 334 ttctcaacagcgtgtgccttggctaagttggaatagttggcagccgactccgctataaaa 393 |||||| |||| || ||||| || | |||||||||| | ||| || || ||||| Sbjct: 10121470 ttctcagcagcatgggcctttgccagagtggaatagttagaagctgattctttgataaac 10121411 Query: 394 gcaatctcctcatctgtgagcttcctcagaaatttcgctgggtttccaccccatacct 451 | |||||| ||||| |||||||||||||| ||||| || |||||||| |||||||||| Sbjct: 10121410 gtaatctcgtcatcagtgagcttcctcaggaatttggcagggtttcctccccatacct 10121353 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 57 tgctcgacccaaaattattg 76 |||||||||||||||||||| Sbjct: 10121748 tgctcgacccaaaattattg 10121729 Score = 40.1 bits (20), Expect = 8.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 601 cctactgtgacattgtctccaatgatggttgg 632 ||||||||||| || || |||||||||||||| Sbjct: 10120660 cctactgtgacgttatccccaatgatggttgg 10120629 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 299 ctttctcaaaatcaatcttt 318 |||||||||||||||||||| Sbjct: 9481999 ctttctcaaaatcaatcttt 9482018
>dbj|AP003631.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0581F09 Length = 154248 Score = 222 bits (112), Expect = 1e-54 Identities = 142/152 (93%) Strand = Plus / Minus Query: 448 acctctccacaagggatccttgtattctgtcttacaagggctccggcagcaaccatccca 507 ||||||||||| ||||||||||| |||||||||||||||||||| ||||||||||||||| Sbjct: 68507 acctctccacaggggatccttgtgttctgtcttacaagggctccagcagcaaccatccca 68448 Query: 508 tgcttttctacaacaacaccatctaacagggttgctcccataccaacaaaagcttcatcc 567 |||||||| || |||||||||||||||||||| || |||||||||||||| ||||| ||| Sbjct: 68447 tgcttttccacgacaacaccatctaacagggtcgcccccataccaacaaatgcttcgtcc 68388 Query: 568 tcaacagtgcatccttgtaatacagcactatg 599 |||||||| ||||||||||||||||||||||| Sbjct: 68387 tcaacagtacatccttgtaatacagcactatg 68356 Score = 115 bits (58), Expect = 2e-22 Identities = 193/238 (81%) Strand = Plus / Minus Query: 214 ggcgccagctctggagggacttcccgagtggcaccaagcatggaaccgtgttcctcgtcc 273 |||| |||||| |||| || |||||||| ||||||| ||| ||| |||||||||| ||| Sbjct: 69059 ggcgtcagctccggagtaacctcccgagtagcaccaatcattgaatcgtgttcctcatcc 69000 Query: 274 tggtgagcaactttcttccgcaacactttctcaaaatcaatcttttccacgggcttggca 333 ||||||||| ||||| || |||| |||||||| ||| ||||||| || ||||||||| Sbjct: 68999 tggtgagcagacttcttgcggaacagcttctcaaattcagtcttttcaacaggcttggca 68940 Query: 334 ttctcaacagcgtgtgccttggctaagttggaatagttggcagccgactccgctataaaa 393 |||||| |||| || ||||| || | |||||||||| | ||| || || ||||| Sbjct: 68939 ttctcagcagcatgggcctttgccagagtggaatagttagaagctgattctttgataaac 68880 Query: 394 gcaatctcctcatctgtgagcttcctcagaaatttcgctgggtttccaccccatacct 451 | |||||| ||||| |||||||||||||| ||||| || |||||||| |||||||||| Sbjct: 68879 gtaatctcgtcatcagtgagcttcctcaggaatttggcagggtttcctccccatacct 68822 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 57 tgctcgacccaaaattattg 76 |||||||||||||||||||| Sbjct: 69217 tgctcgacccaaaattattg 69198 Score = 40.1 bits (20), Expect = 8.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 601 cctactgtgacattgtctccaatgatggttgg 632 ||||||||||| || || |||||||||||||| Sbjct: 68129 cctactgtgacgttatccccaatgatggttgg 68098
>dbj|AP003018.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0004B13 Length = 142268 Score = 222 bits (112), Expect = 1e-54 Identities = 142/152 (93%) Strand = Plus / Minus Query: 448 acctctccacaagggatccttgtattctgtcttacaagggctccggcagcaaccatccca 507 ||||||||||| ||||||||||| |||||||||||||||||||| ||||||||||||||| Sbjct: 45637 acctctccacaggggatccttgtgttctgtcttacaagggctccagcagcaaccatccca 45578 Query: 508 tgcttttctacaacaacaccatctaacagggttgctcccataccaacaaaagcttcatcc 567 |||||||| || |||||||||||||||||||| || |||||||||||||| ||||| ||| Sbjct: 45577 tgcttttccacgacaacaccatctaacagggtcgcccccataccaacaaatgcttcgtcc 45518 Query: 568 tcaacagtgcatccttgtaatacagcactatg 599 |||||||| ||||||||||||||||||||||| Sbjct: 45517 tcaacagtacatccttgtaatacagcactatg 45486 Score = 115 bits (58), Expect = 2e-22 Identities = 193/238 (81%) Strand = Plus / Minus Query: 214 ggcgccagctctggagggacttcccgagtggcaccaagcatggaaccgtgttcctcgtcc 273 |||| |||||| |||| || |||||||| ||||||| ||| ||| |||||||||| ||| Sbjct: 46189 ggcgtcagctccggagtaacctcccgagtagcaccaatcattgaatcgtgttcctcatcc 46130 Query: 274 tggtgagcaactttcttccgcaacactttctcaaaatcaatcttttccacgggcttggca 333 ||||||||| ||||| || |||| |||||||| ||| ||||||| || ||||||||| Sbjct: 46129 tggtgagcagacttcttgcggaacagcttctcaaattcagtcttttcaacaggcttggca 46070 Query: 334 ttctcaacagcgtgtgccttggctaagttggaatagttggcagccgactccgctataaaa 393 |||||| |||| || ||||| || | |||||||||| | ||| || || ||||| Sbjct: 46069 ttctcagcagcatgggcctttgccagagtggaatagttagaagctgattctttgataaac 46010 Query: 394 gcaatctcctcatctgtgagcttcctcagaaatttcgctgggtttccaccccatacct 451 | |||||| ||||| |||||||||||||| ||||| || |||||||| |||||||||| Sbjct: 46009 gtaatctcgtcatcagtgagcttcctcaggaatttggcagggtttcctccccatacct 45952 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 57 tgctcgacccaaaattattg 76 |||||||||||||||||||| Sbjct: 46347 tgctcgacccaaaattattg 46328 Score = 40.1 bits (20), Expect = 8.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 601 cctactgtgacattgtctccaatgatggttgg 632 ||||||||||| || || |||||||||||||| Sbjct: 45259 cctactgtgacgttatccccaatgatggttgg 45228
>ref|NM_187710.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 774 Score = 202 bits (102), Expect = 1e-48 Identities = 138/150 (92%) Strand = Plus / Minus Query: 483 aagggctccggcagcaaccatcccatgcttttctacaacaacaccatctaacagggttgc 542 ||||||||| ||||||||||||||||||||||| || |||||||||||||||||||| || Sbjct: 504 aagggctccagcagcaaccatcccatgcttttccacgacaacaccatctaacagggtcgc 445 Query: 543 tcccataccaacaaaagcttcatcctcaacagtgcatccttgtaatacagcactatgtcc 602 |||||||||||||| ||||| ||||||||||| ||||||||||||||||||||||| || Sbjct: 444 ccccataccaacaaatgcttcgtcctcaacagtacatccttgtaatacagcactatgacc 385 Query: 603 tactgtgacattgtctccaatgatggttgg 632 ||||||||| || || |||||||||||||| Sbjct: 384 tactgtgacgttatccccaatgatggttgg 355 Score = 115 bits (58), Expect = 2e-22 Identities = 193/238 (81%) Strand = Plus / Minus Query: 214 ggcgccagctctggagggacttcccgagtggcaccaagcatggaaccgtgttcctcgtcc 273 |||| |||||| |||| || |||||||| ||||||| ||| ||| |||||||||| ||| Sbjct: 755 ggcgtcagctccggagtaacctcccgagtagcaccaatcattgaatcgtgttcctcatcc 696 Query: 274 tggtgagcaactttcttccgcaacactttctcaaaatcaatcttttccacgggcttggca 333 ||||||||| ||||| || |||| |||||||| ||| ||||||| || ||||||||| Sbjct: 695 tggtgagcagacttcttgcggaacagcttctcaaattcagtcttttcaacaggcttggca 636 Query: 334 ttctcaacagcgtgtgccttggctaagttggaatagttggcagccgactccgctataaaa 393 |||||| |||| || ||||| || | |||||||||| | ||| || || ||||| Sbjct: 635 ttctcagcagcatgggcctttgccagagtggaatagttagaagctgattctttgataaac 576 Query: 394 gcaatctcctcatctgtgagcttcctcagaaatttcgctgggtttccaccccatacct 451 | |||||| ||||| |||||||||||||| ||||| || |||||||| |||||||||| Sbjct: 575 gtaatctcgtcatcagtgagcttcctcaggaatttggcagggtttcctccccatacct 518
>gb|DQ284493.1| Solanum tuberosum clone 050G10 transcription factor APFI-like mRNA, complete cds Length = 1260 Score = 168 bits (85), Expect = 1e-38 Identities = 178/209 (85%) Strand = Plus / Minus Query: 408 tgtgagcttcctcagaaatttcgctgggtttccaccccatacctctccacaagggatcct 467 ||||||||||||||||||| | ||||| ||||| ||||| |||||||||||||| ||||| Sbjct: 580 tgtgagcttcctcagaaatctagctggatttcctccccagacctctccacaaggaatcct 521 Query: 468 tgtattctgtcttacaagggctccggcagcaaccatcccatgcttttctacaacaacacc 527 |||||||| || |||||||| || || |||||||| ||| || || |||||||| || Sbjct: 520 cgtattctgcctgacaagggcaccagccgcaaccattgcatttttctccacaacaactcc 461 Query: 528 atctaacagggttgctcccataccaacaaaagcttcatcctcaacagtgcatccttgtaa 587 ||||| ||| ||||| |||||||||||||| || ||||| |||||||| ||||| ||||| Sbjct: 460 atctagcagagttgcacccataccaacaaatgcctcatcttcaacagtacatccatgtaa 401 Query: 588 tacagcactatgtcctactgtgacattgt 616 ||||||||||| ||||| || ||||||| Sbjct: 400 gacagcactatgacctacagtaacattgt 372 Score = 54.0 bits (27), Expect = 6e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 265 tcctcgtcctggtgagcaactttcttccgcaacactttctcaaaatcaatc 315 |||||||| | | |||||| ||||||||||||||| |||||||| |||||| Sbjct: 723 tcctcgtctttgcgagcaaatttcttccgcaacaccttctcaaattcaatc 673
>ref|NM_101815.2| Arabidopsis thaliana unknown protein AT1G19580 mRNA, complete cds Length = 1357 Score = 161 bits (81), Expect = 3e-36 Identities = 204/245 (83%) Strand = Plus / Minus Query: 388 ataaaagcaatctcctcatctgtgagcttcctcagaaatttcgctgggtttccaccccat 447 ||||||||||| |||||||| ||||||||||| || || | ||||||||||| |||||| Sbjct: 773 ataaaagcaatttcctcatcagtgagcttcctgaggaaccttgctgggtttcctccccat 714 Query: 448 acctctccacaagggatccttgtattctgtcttacaagggctccggcagcaaccatccca 507 ||||||||| |||| || || || || |||| |||||| || || ||||||||||||||| Sbjct: 713 acctctccagaaggaattctggtgttttgtcgtacaagtgcaccagcagcaaccatccca 654 Query: 508 tgcttttctacaacaacaccatctaacagggttgctcccataccaacaaaagcttcatcc 567 |||||||| ||||| || ||||| | || || || ||||| |||| ||| | |||||| Sbjct: 653 tgcttttcaacaacgaccccatcaagaagtgtcgcacccatcccaataaaggtctcatcc 594 Query: 568 tcaacagtgcatccttgtaatacagcactatgtcctactgtgacattgtctccaatgatg 627 |||||||| ||||| ||||| ||||||||||| || | || |||||||||||||| ||| Sbjct: 593 tcaacagtacatccatgtaaaacagcactatgaccaatggttacattgtctccaattatg 534 Query: 628 gttgg 632 ||||| Sbjct: 533 gttgg 529
>gb|AY085025.1| Arabidopsis thaliana clone 12477 mRNA, complete sequence Length = 1337 Score = 161 bits (81), Expect = 3e-36 Identities = 204/245 (83%) Strand = Plus / Minus Query: 388 ataaaagcaatctcctcatctgtgagcttcctcagaaatttcgctgggtttccaccccat 447 ||||||||||| |||||||| ||||||||||| || || | ||||||||||| |||||| Sbjct: 775 ataaaagcaatttcctcatcagtgagcttcctgaggaaccttgctgggtttcctccccat 716 Query: 448 acctctccacaagggatccttgtattctgtcttacaagggctccggcagcaaccatccca 507 ||||||||| |||| || || || || |||| |||||| || || ||||||||||||||| Sbjct: 715 acctctccagaaggaattctggtgttttgtcgtacaagcgcaccagcagcaaccatccca 656 Query: 508 tgcttttctacaacaacaccatctaacagggttgctcccataccaacaaaagcttcatcc 567 |||||||| ||||| || ||||| | || || || ||||| |||| ||| | |||||| Sbjct: 655 tgcttttcaacaacgaccccatcaagaagtgtcgcacccatcccaataaaggtctcatcc 596 Query: 568 tcaacagtgcatccttgtaatacagcactatgtcctactgtgacattgtctccaatgatg 627 |||||||| ||||| ||||| ||||||||||| || | || |||||||||||||| ||| Sbjct: 595 tcaacagtacatccatgtaaaacagcactatgaccaatggttacattgtctccaattatg 536 Query: 628 gttgg 632 ||||| Sbjct: 535 gttgg 531
>dbj|AK176887.1| Arabidopsis thaliana mRNA, complete cds, clone: RAFL25-45-B01 Length = 1131 Score = 161 bits (81), Expect = 3e-36 Identities = 204/245 (83%) Strand = Plus / Minus Query: 388 ataaaagcaatctcctcatctgtgagcttcctcagaaatttcgctgggtttccaccccat 447 ||||||||||| |||||||| ||||||||||| || || | ||||||||||| |||||| Sbjct: 659 ataaaagcaatttcctcatcagtgagcttcctgaggaaccttgctgggtttcctccccat 600 Query: 448 acctctccacaagggatccttgtattctgtcttacaagggctccggcagcaaccatccca 507 ||||||||| |||| || || || || |||| |||||| || || ||||||||||||||| Sbjct: 599 acctctccagaaggaattctggtgttttgtcgtacaagtgcaccagcagcaaccatccca 540 Query: 508 tgcttttctacaacaacaccatctaacagggttgctcccataccaacaaaagcttcatcc 567 |||||||| ||||| || ||||| | || || || ||||| |||| ||| | |||||| Sbjct: 539 tgcttttcaacaacgaccccatcaagaagtgtcgcacccatcccaataaaggtctcatcc 480 Query: 568 tcaacagtgcatccttgtaatacagcactatgtcctactgtgacattgtctccaatgatg 627 |||||||| ||||| ||||| ||||||||||| || | || |||||||||||||| ||| Sbjct: 479 tcaacagtacatccatgtaaaacagcactatgaccaatggttacattgtctccaattatg 420 Query: 628 gttgg 632 ||||| Sbjct: 419 gttgg 415
>dbj|AK176844.1| Arabidopsis thaliana mRNA, complete cds, clone: RAFL25-40-H22 Length = 1293 Score = 161 bits (81), Expect = 3e-36 Identities = 204/245 (83%) Strand = Plus / Minus Query: 388 ataaaagcaatctcctcatctgtgagcttcctcagaaatttcgctgggtttccaccccat 447 ||||||||||| |||||||| ||||||||||| || || | ||||||||||| |||||| Sbjct: 717 ataaaagcaatttcctcatcagtgagcttcctgaggaaccttgctgggtttcctccccat 658 Query: 448 acctctccacaagggatccttgtattctgtcttacaagggctccggcagcaaccatccca 507 ||||||||| |||| || || || || |||| |||||| || || ||||||||||||||| Sbjct: 657 acctctccagaaggaattctggtgttttgtcgtacaagtgcaccagcagcaaccatccca 598 Query: 508 tgcttttctacaacaacaccatctaacagggttgctcccataccaacaaaagcttcatcc 567 |||||||| ||||| || ||||| | || || || ||||| |||| ||| | |||||| Sbjct: 597 tgcttttcaacaacgaccccatcaagaagtgtcgcacccatcccaataaaggtctcatcc 538 Query: 568 tcaacagtgcatccttgtaatacagcactatgtcctactgtgacattgtctccaatgatg 627 |||||||| ||||| ||||| ||||||||||| || | || |||||||||||||| ||| Sbjct: 537 tcaacagtacatccatgtaaaacagcactatgaccaatggttacattgtctccaattatg 478 Query: 628 gttgg 632 ||||| Sbjct: 477 gttgg 473
>dbj|AK175388.1| Arabidopsis thaliana mRNA, complete cds, clone: RAFL21-82-L07 Length = 1158 Score = 161 bits (81), Expect = 3e-36 Identities = 204/245 (83%) Strand = Plus / Minus Query: 388 ataaaagcaatctcctcatctgtgagcttcctcagaaatttcgctgggtttccaccccat 447 ||||||||||| |||||||| ||||||||||| || || | ||||||||||| |||||| Sbjct: 686 ataaaagcaatttcctcatcagtgagcttcctgaggaaccttgctgggtttcctccccat 627 Query: 448 acctctccacaagggatccttgtattctgtcttacaagggctccggcagcaaccatccca 507 ||||||||| |||| || || || || |||| |||||| || || ||||||||||||||| Sbjct: 626 acctctccagaaggaattctggtgttttgtcgtacaagtgcaccagcagcaaccatccca 567 Query: 508 tgcttttctacaacaacaccatctaacagggttgctcccataccaacaaaagcttcatcc 567 |||||||| ||||| || ||||| | || || || ||||| |||| ||| | |||||| Sbjct: 566 tgcttttcaacaacgaccccatcaagaagtgtcgcacccatcccaataaaggtctcatcc 507 Query: 568 tcaacagtgcatccttgtaatacagcactatgtcctactgtgacattgtctccaatgatg 627 |||||||| ||||| ||||| ||||||||||| || | || |||||||||||||| ||| Sbjct: 506 tcaacagtacatccatgtaaaacagcactatgaccaatggttacattgtctccaattatg 447 Query: 628 gttgg 632 ||||| Sbjct: 446 gttgg 442
>gb|BT017479.1| Zea mays clone EL01N0408G09.c mRNA sequence Length = 1166 Score = 109 bits (55), Expect = 1e-20 Identities = 193/239 (80%) Strand = Plus / Minus Query: 394 gcaatctcctcatctgtgagcttcctcagaaatttcgctgggtttccaccccatacctct 453 ||||||||||| ||||| |||||||| || || || || || || || |||| |||||| Sbjct: 576 gcaatctcctcttctgtaagcttccttaggaacttggcaggattaccgacccagacctct 517 Query: 454 ccacaagggatccttgtattctgtcttacaagggctccggcagcaaccatcccatgcttt 513 ||| |||| |||||||||||||| | ||||| | ||| ||| ||||||| | |||||| Sbjct: 516 ccagaaggaatccttgtattctgcttaacaagagatcctgcaccaaccatgctgtgcttt 457 Query: 514 tctacaacaacaccatctaacagggttgctcccataccaacaaaagcttcatcctcaaca 573 || || || || ||||| | ||| || || |||||||||||||||||||||||||||| Sbjct: 456 tcaaccaccactccatcaagcagagtggcacccataccaacaaaagcttcatcctcaatg 397 Query: 574 gtgcatccttgtaatacagcactatgtcctactgtgacattgtctccaatgatggttgg 632 || ||| | |||||||||||||| || || ||||| || ||| |||||| |||||||| Sbjct: 396 gtacatgcatgtaatacagcactgtgacccactgtcacgttgcttccaattatggttgg 338
>gb|AY107290.1| Zea mays PCO063868 mRNA sequence Length = 1381 Score = 109 bits (55), Expect = 1e-20 Identities = 193/239 (80%) Strand = Plus / Minus Query: 394 gcaatctcctcatctgtgagcttcctcagaaatttcgctgggtttccaccccatacctct 453 ||||||||||| ||||| |||||||| || || || || || || || |||| |||||| Sbjct: 764 gcaatctcctcttctgtaagcttccttaggaacttggcaggattaccgacccagacctct 705 Query: 454 ccacaagggatccttgtattctgtcttacaagggctccggcagcaaccatcccatgcttt 513 ||| |||| |||||||||||||| | ||||| | ||| ||| ||||||| | |||||| Sbjct: 704 ccagaaggaatccttgtattctgcttaacaagagatcctgcaccaaccatgctgtgcttt 645 Query: 514 tctacaacaacaccatctaacagggttgctcccataccaacaaaagcttcatcctcaaca 573 || || || || ||||| | ||| || || |||||||||||||||||||||||||||| Sbjct: 644 tcaactaccactccatcaagcagagtggcacccataccaacaaaagcttcatcctcaatg 585 Query: 574 gtgcatccttgtaatacagcactatgtcctactgtgacattgtctccaatgatggttgg 632 || ||| | |||||||||||||| || || ||||| || ||| |||||| |||||||| Sbjct: 584 gtacatgcatgtaatacagcactgtgacccactgtcacgttgcttccaattatggttgg 526
>gb|AF249876.1|AF249876 Arabidopsis thaliana transcription factor APFI mRNA, complete cds Length = 1216 Score = 107 bits (54), Expect = 4e-20 Identities = 159/194 (81%) Strand = Plus / Minus Query: 430 gctgggtttccaccccatacctctccacaagggatccttgtattctgtcttacaagggct 489 ||||| ||||| ||||| ||||||||| ||||||| | || |||||| | ||||| | Sbjct: 696 gctggatttcctccccacacctctccagaagggattcgcgtgttctgtttcacaagagaa 637 Query: 490 ccggcagcaaccatcccatgcttttctacaacaacaccatctaacagggttgctcccata 549 || ||||||||||| |||| || || || ||||||||||| | || |||||||||||| Sbjct: 636 ccagcagcaaccatggcatgtttctcaaccacaacaccatcaagtagtgttgctcccata 577 Query: 550 ccaacaaaagcttcatcctcaacagtgcatccttgtaatacagcactatgtcctactgtg 609 ||||||||||| |||||||||||||| || || || | |||||||| || |||||||| Sbjct: 576 ccaacaaaagcatcatcctcaacagtacacccatgaatgacagcactgtgacctactgtt 517 Query: 610 acattgtctccaat 623 |||||||| ||||| Sbjct: 516 acattgtccccaat 503
>gb|AC137669.12| Medicago truncatula clone mth2-27m3, complete sequence Length = 120323 Score = 105 bits (53), Expect = 2e-19 Identities = 125/149 (83%) Strand = Plus / Plus Query: 448 acctctccacaagggatccttgtattctgtcttacaagggctccggcagcaaccatccca 507 ||||||||||| ||||| ||||||||||| || ||||| ||||||||||||||||| || Sbjct: 77080 acctctccacaggggattcttgtattctgcctgacaagagctccggcagcaaccatggca 77139 Query: 508 tgcttttctacaacaacaccatctaacagggttgctcccataccaacaaaagcttcatcc 567 || || || ||| |||||||| | | |||||| ||||| |||| || || |||||| Sbjct: 77140 tgtttctcaacatgcacaccatcaagtaaggttgcacccatgccaatgaatgcctcatcc 77199 Query: 568 tcaacagtgcatccttgtaatacagcact 596 |||||||||||||||||||| |||||||| Sbjct: 77200 tcaacagtgcatccttgtaacacagcact 77228
>ref|NM_103620.2| Arabidopsis thaliana APFI AT1G47260 (APFI) mRNA, complete cds Length = 1750 Score = 101 bits (51), Expect = 3e-18 Identities = 183/227 (80%) Strand = Plus / Minus Query: 397 atctcctcatctgtgagcttcctcagaaatttcgctgggtttccaccccatacctctcca 456 ||||| |||||||| | ||| |||| || || ||||| ||||| ||||| ||||||||| Sbjct: 727 atctcttcatctgttaactttctcatgaactttgctggatttcctccccacacctctcca 668 Query: 457 caagggatccttgtattctgtcttacaagggctccggcagcaaccatcccatgcttttct 516 ||||||| | || |||||| | ||||| | || ||||||||||| |||| || || Sbjct: 667 gaagggattcgcgtgttctgtttcacaagagaaccagcagcaaccatggcatgtttctca 608 Query: 517 acaacaacaccatctaacagggttgctcccataccaacaaaagcttcatcctcaacagtg 576 || || |||||||| | || ||||||||||||||||||||||| |||||||||||||| Sbjct: 607 accaccacaccatcaagtagtgttgctcccataccaacaaaagcatcatcctcaacagta 548 Query: 577 catccttgtaatacagcactatgtcctactgtgacattgtctccaat 623 || || || | |||||||| || |||||||| |||||||| ||||| Sbjct: 547 cacccatgaatgacagcactgtgacctactgttacattgtccccaat 501
>gb|AY113936.1| Arabidopsis thaliana unknown protein (At1g47260) mRNA, complete cds Length = 868 Score = 101 bits (51), Expect = 3e-18 Identities = 183/227 (80%) Strand = Plus / Minus Query: 397 atctcctcatctgtgagcttcctcagaaatttcgctgggtttccaccccatacctctcca 456 ||||| |||||||| | ||| |||| || || ||||| ||||| ||||| ||||||||| Sbjct: 590 atctcttcatctgttaactttctcatgaactttgctggatttcctccccacacctctcca 531 Query: 457 caagggatccttgtattctgtcttacaagggctccggcagcaaccatcccatgcttttct 516 ||||||| | || |||||| | ||||| | || ||||||||||| |||| || || Sbjct: 530 gaagggattcgcgtgttctgtttcacaagagaaccagcagcaaccatggcatgtttctca 471 Query: 517 acaacaacaccatctaacagggttgctcccataccaacaaaagcttcatcctcaacagtg 576 || || |||||||| | || ||||||||||||||||||||||| |||||||||||||| Sbjct: 470 accaccacaccatcaagtagtgttgctcccataccaacaaaagcatcatcctcaacagta 411 Query: 577 catccttgtaatacagcactatgtcctactgtgacattgtctccaat 623 || || || | |||||||| || |||||||| |||||||| ||||| Sbjct: 410 cacccatgaatgacagcactgtgacctactgttacattgtccccaat 364
>gb|AY045979.1| Arabidopsis thaliana unknown protein (At1g47260) mRNA, complete cds Length = 1182 Score = 101 bits (51), Expect = 3e-18 Identities = 183/227 (80%) Strand = Plus / Minus Query: 397 atctcctcatctgtgagcttcctcagaaatttcgctgggtttccaccccatacctctcca 456 ||||| |||||||| | ||| |||| || || ||||| ||||| ||||| ||||||||| Sbjct: 696 atctcttcatctgttaactttctcatgaactttgctggatttcctccccacacctctcca 637 Query: 457 caagggatccttgtattctgtcttacaagggctccggcagcaaccatcccatgcttttct 516 ||||||| | || |||||| | ||||| | || ||||||||||| |||| || || Sbjct: 636 gaagggattcgcgtgttctgtttcacaagagaaccagcagcaaccatggcatgtttctca 577 Query: 517 acaacaacaccatctaacagggttgctcccataccaacaaaagcttcatcctcaacagtg 576 || || |||||||| | || ||||||||||||||||||||||| |||||||||||||| Sbjct: 576 accaccacaccatcaagtagtgttgctcccataccaacaaaagcatcatcctcaacagta 517 Query: 577 catccttgtaatacagcactatgtcctactgtgacattgtctccaat 623 || || || | |||||||| || |||||||| |||||||| ||||| Sbjct: 516 cacccatgaatgacagcactgtgacctactgttacattgtccccaat 470
>dbj|AK103904.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033150M03, full insert sequence Length = 1238 Score = 99.6 bits (50), Expect = 1e-17 Identities = 155/190 (81%) Strand = Plus / Minus Query: 443 cccatacctctccacaagggatccttgtattctgtcttacaagggctccggcagcaacca 502 |||| ||||||||| |||| |||||||| ||||| | ||||| | ||| ||| |||||| Sbjct: 716 cccagacctctccagaaggaatccttgtgttctgcttaacaagcgatcctgcaccaacca 657 Query: 503 tcccatgcttttctacaacaacaccatctaacagggttgctcccataccaacaaaagctt 562 | | |||||||| || || || ||||| | ||| || || ||||||||||||||||||| Sbjct: 656 tgctgtgcttttcaacgaccactccatcaagcagagtggcacccataccaacaaaagctt 597 Query: 563 catcctcaacagtgcatccttgtaatacagcactatgtcctactgtgacattgtctccaa 622 ||||||| || |||||| | || | ||||||||||| |||| ||| ||||||| ||||| Sbjct: 596 catcctcgacggtgcatgcgtgcagaacagcactatgacctattgtaacattgtttccaa 537 Query: 623 tgatggttgg 632 | |||||||| Sbjct: 536 ttatggttgg 527
>dbj|AK058974.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-020-D04, full insert sequence Length = 1195 Score = 99.6 bits (50), Expect = 1e-17 Identities = 155/190 (81%) Strand = Plus / Minus Query: 443 cccatacctctccacaagggatccttgtattctgtcttacaagggctccggcagcaacca 502 |||| ||||||||| |||| |||||||| ||||| | ||||| | ||| ||| |||||| Sbjct: 718 cccagacctctccagaaggaatccttgtgttctgcttaacaagcgatcctgcaccaacca 659 Query: 503 tcccatgcttttctacaacaacaccatctaacagggttgctcccataccaacaaaagctt 562 | | |||||||| || || || ||||| | ||| || || ||||||||||||||||||| Sbjct: 658 tgctgtgcttttcaacgaccactccatcaagcagagtggcacccataccaacaaaagctt 599 Query: 563 catcctcaacagtgcatccttgtaatacagcactatgtcctactgtgacattgtctccaa 622 ||||||| || |||||| | || | ||||||||||| |||| ||| ||||||| ||||| Sbjct: 598 catcctcgacggtgcatgcgtgcagaacagcactatgacctattgtaacattgtttccaa 539 Query: 623 tgatggttgg 632 | |||||||| Sbjct: 538 ttatggttgg 529
>gb|BT014370.1| Lycopersicon esculentum clone 133658F, mRNA sequence Length = 1217 Score = 97.6 bits (49), Expect = 4e-17 Identities = 187/233 (80%) Strand = Plus / Minus Query: 397 atctcctcatctgtgagcttcctcagaaatttcgctgggtttccaccccatacctctcca 456 ||||| ||||| || |||||||||||||| || || || || || ||||||||||||| Sbjct: 748 atctcttcatcagttagcttcctcagaaacttagcgggattgcctgcccatacctctccg 689 Query: 457 caagggatccttgtattctgtcttacaagggctccggcagcaaccatcccatgcttttct 516 | || |||||||| |||||| | ||||||||||| ||||||||||| |||| || ||| Sbjct: 688 gagggaatccttgtgttctgtttcacaagggctcctgcagcaaccatggcatgtttctct 629 Query: 517 acaacaacaccatctaacagggttgctcccataccaacaaaagcttcatcctcaacagtg 576 ||| ||||||||| | ||| || || |||||||||| || || |||||||||| ||| Sbjct: 628 acatgaacaccatcaagcagtgtggcccccataccaatgaaggcctcatcctcaatggtg 569 Query: 577 catccttgtaatacagcactatgtcctactgtgacattgtctccaatgatggt 629 || || |||| ||||||||||| || || || ||||||| || |||||||| Sbjct: 568 cagccatgtacaacagcactatgaccaacagtaacattgttccctatgatggt 516
>gb|AC024609.2| Arabidopsis thaliana chromosome I BAC F14P1 genomic sequence, complete sequence Length = 90341 Score = 93.7 bits (47), Expect = 7e-16 Identities = 128/155 (82%) Strand = Plus / Plus Query: 445 catacctctccacaagggatccttgtattctgtcttacaagggctccggcagcaaccatc 504 |||||||||||| |||| || || || || |||| |||||| || || |||||||||||| Sbjct: 86051 catacctctccagaaggaattctggtgttttgtcgtacaagtgcaccagcagcaaccatc 86110 Query: 505 ccatgcttttctacaacaacaccatctaacagggttgctcccataccaacaaaagcttca 564 ||||||||||| ||||| || ||||| | || || || ||||| |||| ||| | ||| Sbjct: 86111 ccatgcttttcaacaacgaccccatcaagaagtgtcgcacccatcccaataaaggtctca 86170 Query: 565 tcctcaacagtgcatccttgtaatacagcactatg 599 ||||||||||| ||||| ||||| ||||||||||| Sbjct: 86171 tcctcaacagtacatccatgtaaaacagcactatg 86205 Score = 63.9 bits (32), Expect = 6e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 388 ataaaagcaatctcctcatctgtgagcttcctcagaaatttcgctgggtttccaccccat 447 ||||||||||| |||||||| ||||||||||| || || | ||||||||||| |||||| Sbjct: 85587 ataaaagcaatttcctcatcagtgagcttcctgaggaaccttgctgggtttcctccccat 85646 Query: 448 acct 451 |||| Sbjct: 85647 acct 85650
>gb|AC025808.8|AC025808 Genomic sequence for Arabidopsis thaliana BAC F18O14 from chromosome I, complete sequence Length = 120977 Score = 93.7 bits (47), Expect = 7e-16 Identities = 128/155 (82%) Strand = Plus / Minus Query: 445 catacctctccacaagggatccttgtattctgtcttacaagggctccggcagcaaccatc 504 |||||||||||| |||| || || || || |||| |||||| || || |||||||||||| Sbjct: 109595 catacctctccagaaggaattctggtgttttgtcgtacaagtgcaccagcagcaaccatc 109536 Query: 505 ccatgcttttctacaacaacaccatctaacagggttgctcccataccaacaaaagcttca 564 ||||||||||| ||||| || ||||| | || || || ||||| |||| ||| | ||| Sbjct: 109535 ccatgcttttcaacaacgaccccatcaagaagtgtcgcacccatcccaataaaggtctca 109476 Query: 565 tcctcaacagtgcatccttgtaatacagcactatg 599 ||||||||||| ||||| ||||| ||||||||||| Sbjct: 109475 tcctcaacagtacatccatgtaaaacagcactatg 109441 Score = 63.9 bits (32), Expect = 6e-07 Identities = 56/64 (87%) Strand = Plus / Minus Query: 388 ataaaagcaatctcctcatctgtgagcttcctcagaaatttcgctgggtttccaccccat 447 ||||||||||| |||||||| ||||||||||| || || | ||||||||||| |||||| Sbjct: 110059 ataaaagcaatttcctcatcagtgagcttcctgaggaaccttgctgggtttcctccccat 110000 Query: 448 acct 451 |||| Sbjct: 109999 acct 109996
>ref|XM_479312.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1155 Score = 83.8 bits (42), Expect = 6e-13 Identities = 153/190 (80%) Strand = Plus / Minus Query: 443 cccatacctctccacaagggatccttgtattctgtcttacaagggctccggcagcaacca 502 |||| ||||||||| |||| ||||| || || || ||||||||| ||| ||| |||||| Sbjct: 626 cccagacctctccagaaggaatcctggtgttttgctttacaagggatcctgcaccaacca 567 Query: 503 tcccatgcttttctacaacaacaccatctaacagggttgctcccataccaacaaaagctt 562 | | |||||||| || || || ||||| | ||| || || ||||||||||||||||||| Sbjct: 566 tgctgtgcttttcaaccaccactccatcaagcagagtggcacccataccaacaaaagctt 507 Query: 563 catcctcaacagtgcatccttgtaatacagcactatgtcctactgtgacattgtctccaa 622 ||||||| || ||||| | |||| |||||||| || |||| ||| ||| ||| ||||| Sbjct: 506 catcctcgacgatgcatgcgtgtagaacagcactgtgacctattgtaacactgtttccaa 447 Query: 623 tgatggttgg 632 | |||||||| Sbjct: 446 ttatggttgg 437
>dbj|AK060158.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-G03, full insert sequence Length = 1155 Score = 83.8 bits (42), Expect = 6e-13 Identities = 153/190 (80%) Strand = Plus / Minus Query: 443 cccatacctctccacaagggatccttgtattctgtcttacaagggctccggcagcaacca 502 |||| ||||||||| |||| ||||| || || || ||||||||| ||| ||| |||||| Sbjct: 626 cccagacctctccagaaggaatcctggtgttttgctttacaagggatcctgcaccaacca 567 Query: 503 tcccatgcttttctacaacaacaccatctaacagggttgctcccataccaacaaaagctt 562 | | |||||||| || || || ||||| | ||| || || ||||||||||||||||||| Sbjct: 566 tgctgtgcttttcaaccaccactccatcaagcagagtggcacccataccaacaaaagctt 507 Query: 563 catcctcaacagtgcatccttgtaatacagcactatgtcctactgtgacattgtctccaa 622 ||||||| || ||||| | |||| |||||||| || |||| ||| ||| ||| ||||| Sbjct: 506 catcctcgacgatgcatgcgtgtagaacagcactgtgacctattgtaacactgtttccaa 447 Query: 623 tgatggttgg 632 | |||||||| Sbjct: 446 ttatggttgg 437
>ref|NM_126049.3| Arabidopsis thaliana unknown protein AT5G66510 mRNA, complete cds Length = 1223 Score = 71.9 bits (36), Expect = 2e-09 Identities = 168/212 (79%) Strand = Plus / Minus Query: 414 cttcctcagaaatttcgctgggtttccaccccatacctctccacaagggatccttgtatt 473 ||||||||||||||| |||||||| || ||||| ||||| ||| | || || || || || Sbjct: 707 cttcctcagaaatttagctgggttgcctccccaaacctcgccagagggaattctagtgtt 648 Query: 474 ctgtcttacaagggctccggcagcaaccatcccatgcttttctacaacaacaccatctaa 533 ||| || ||||| ||||| | ||||||||| |||| ||||| ||| | | ||||| || Sbjct: 647 ctgcctaacaagagctcctgaagcaaccatggcatgtttttcaacatgagctccatccaa 588 Query: 534 cagggttgctcccataccaacaaaagcttcatcctcaacagtgcatccttgtaatacagc 593 | ||||| | |||||| | | || |||||||| |||||||| || ||||| ||||| Sbjct: 587 gacagttgcacttgtaccaatataggcctcatcctcgacagtgcagccatgtaaaacagc 528 Query: 594 actatgtcctactgtgacattgtctccaatga 625 |||||| || | ||||||||||||||||||| Sbjct: 527 actatgaccaatggtgacattgtctccaatga 496
>gb|AY079385.1| Arabidopsis thaliana putative ferripyochelin-binding protein (At5g66510) mRNA, complete cds Length = 808 Score = 71.9 bits (36), Expect = 2e-09 Identities = 168/212 (79%) Strand = Plus / Minus Query: 414 cttcctcagaaatttcgctgggtttccaccccatacctctccacaagggatccttgtatt 473 ||||||||||||||| |||||||| || ||||| ||||| ||| | || || || || || Sbjct: 573 cttcctcagaaatttagctgggttgcctccccaaacctcgccagagggaattctagtgtt 514 Query: 474 ctgtcttacaagggctccggcagcaaccatcccatgcttttctacaacaacaccatctaa 533 ||| || ||||| ||||| | ||||||||| |||| ||||| ||| | | ||||| || Sbjct: 513 ctgcctaacaagagctcctgaagcaaccatggcatgtttttcaacatgagctccatccaa 454 Query: 534 cagggttgctcccataccaacaaaagcttcatcctcaacagtgcatccttgtaatacagc 593 | ||||| | |||||| | | || |||||||| |||||||| || ||||| ||||| Sbjct: 453 gacagttgcacttgtaccaatataggcctcatcctcgacagtgcagccatgtaaaacagc 394 Query: 594 actatgtcctactgtgacattgtctccaatga 625 |||||| || | ||||||||||||||||||| Sbjct: 393 actatgaccaatggtgacattgtctccaatga 362
>gb|AY045784.1| Arabidopsis thaliana putative ferripyochelin-binding protein (At5g66510) mRNA, complete cds Length = 1163 Score = 71.9 bits (36), Expect = 2e-09 Identities = 168/212 (79%) Strand = Plus / Minus Query: 414 cttcctcagaaatttcgctgggtttccaccccatacctctccacaagggatccttgtatt 473 ||||||||||||||| |||||||| || ||||| ||||| ||| | || || || || || Sbjct: 681 cttcctcagaaatttagctgggttgcctccccaaacctcgccagagggaattctagtgtt 622 Query: 474 ctgtcttacaagggctccggcagcaaccatcccatgcttttctacaacaacaccatctaa 533 ||| || ||||| ||||| | ||||||||| |||| ||||| ||| | | ||||| || Sbjct: 621 ctgcctaacaagagctcctgaagcaaccatggcatgtttttcaacatgagctccatccaa 562 Query: 534 cagggttgctcccataccaacaaaagcttcatcctcaacagtgcatccttgtaatacagc 593 | ||||| | |||||| | | || |||||||| |||||||| || ||||| ||||| Sbjct: 561 gacagttgcacttgtaccaatataggcctcatcctcgacagtgcagccatgtaaaacagc 502 Query: 594 actatgtcctactgtgacattgtctccaatga 625 |||||| || | ||||||||||||||||||| Sbjct: 501 actatgaccaatggtgacattgtctccaatga 470
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 71.9 bits (36), Expect = 2e-09 Identities = 123/152 (80%) Strand = Plus / Minus Query: 448 acctctccacaagggatccttgtattctgtcttacaagggctccggcagcaaccatccca 507 ||||||||| |||| |||||||| ||||| | ||||| | ||| ||| ||||||| | Sbjct: 3550621 acctctccagaaggaatccttgtgttctgcttaacaagcgatcctgcaccaaccatgctg 3550562 Query: 508 tgcttttctacaacaacaccatctaacagggttgctcccataccaacaaaagcttcatcc 567 |||||||| || || || ||||| | ||| || || |||||||||||||||||||||||| Sbjct: 3550561 tgcttttcaacgaccactccatcaagcagagtggcacccataccaacaaaagcttcatcc 3550502 Query: 568 tcaacagtgcatccttgtaatacagcactatg 599 || || |||||| | || | ||||||||||| Sbjct: 3550501 tcgacggtgcatgcgtgcagaacagcactatg 3550470
>emb|BX829487.1|CNS0A1JN Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB16ZG12 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 874 Score = 71.9 bits (36), Expect = 2e-09 Identities = 168/212 (79%) Strand = Plus / Minus Query: 414 cttcctcagaaatttcgctgggtttccaccccatacctctccacaagggatccttgtatt 473 ||||||||||||||| |||||||| || ||||| ||||| ||| | || || || || || Sbjct: 403 cttcctcagaaatttagctgggttgcctccccaaacctcgccagagggaattctagtgtt 344 Query: 474 ctgtcttacaagggctccggcagcaaccatcccatgcttttctacaacaacaccatctaa 533 ||| || ||||| ||||| | ||||||||| |||| ||||| ||| | | ||||| || Sbjct: 343 ctgcctaacaagagctcctgaagcaaccatggcatgtttttcaacatgagctccatccaa 284 Query: 534 cagggttgctcccataccaacaaaagcttcatcctcaacagtgcatccttgtaatacagc 593 | ||||| | |||||| | | || |||||||| |||||||| || ||||| ||||| Sbjct: 283 gacagttgcacttgtaccaatataggcctcatcctcgacagtgcagccatgtaaaacagc 224 Query: 594 actatgtcctactgtgacattgtctccaatga 625 |||||| || | ||||||||||||||||||| Sbjct: 223 actatgaccaatggtgacattgtctccaatga 192
>gb|AC079677.4|AC079677 Arabidopsis thaliana chromosome 1 BAC F8G22 genomic sequence, complete sequence Length = 42801 Score = 71.9 bits (36), Expect = 2e-09 Identities = 105/128 (82%) Strand = Plus / Minus Query: 448 acctctccacaagggatccttgtattctgtcttacaagggctccggcagcaaccatccca 507 ||||||||| ||||||| | || |||||| | ||||| | || ||||||||||| || Sbjct: 8024 acctctccagaagggattcgcgtgttctgtttcacaagagaaccagcagcaaccatggca 7965 Query: 508 tgcttttctacaacaacaccatctaacagggttgctcccataccaacaaaagcttcatcc 567 || || || || || |||||||| | || ||||||||||||||||||||||| |||||| Sbjct: 7964 tgtttctcaaccaccacaccatcaagtagtgttgctcccataccaacaaaagcatcatcc 7905 Query: 568 tcaacagt 575 |||||||| Sbjct: 7904 tcaacagt 7897
>gb|AY087379.1| Arabidopsis thaliana clone 34700 mRNA, complete sequence Length = 1198 Score = 71.9 bits (36), Expect = 2e-09 Identities = 168/212 (79%) Strand = Plus / Minus Query: 414 cttcctcagaaatttcgctgggtttccaccccatacctctccacaagggatccttgtatt 473 ||||||||||||||| |||||||| || ||||| ||||| ||| | || || || || || Sbjct: 708 cttcctcagaaatttagctgggttgcctccccaaacctcgccagagggaattctagtgtt 649 Query: 474 ctgtcttacaagggctccggcagcaaccatcccatgcttttctacaacaacaccatctaa 533 ||| || ||||| ||||| | ||||||||| |||| ||||| ||| | | ||||| || Sbjct: 648 ctgcctaacaagagctcctgaagcaaccatggcatgtttttcaacatgagctccatccaa 589 Query: 534 cagggttgctcccataccaacaaaagcttcatcctcaacagtgcatccttgtaatacagc 593 | ||||| | |||||| | | || |||||||| |||||||| || ||||| ||||| Sbjct: 588 gacagttgcacttgtaccaatataggcctcatcctcgacagtgcagccatgtaaaacagc 529 Query: 594 actatgtcctactgtgacattgtctccaatga 625 |||||| || | ||||||||||||||||||| Sbjct: 528 actatgaccaatggtgacattgtctccaatga 497
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 71.9 bits (36), Expect = 2e-09 Identities = 123/152 (80%) Strand = Plus / Minus Query: 448 acctctccacaagggatccttgtattctgtcttacaagggctccggcagcaaccatccca 507 ||||||||| |||| |||||||| ||||| | ||||| | ||| ||| ||||||| | Sbjct: 3550566 acctctccagaaggaatccttgtgttctgcttaacaagcgatcctgcaccaaccatgctg 3550507 Query: 508 tgcttttctacaacaacaccatctaacagggttgctcccataccaacaaaagcttcatcc 567 |||||||| || || || ||||| | ||| || || |||||||||||||||||||||||| Sbjct: 3550506 tgcttttcaacgaccactccatcaagcagagtggcacccataccaacaaaagcttcatcc 3550447 Query: 568 tcaacagtgcatccttgtaatacagcactatg 599 || || |||||| | || | ||||||||||| Sbjct: 3550446 tcgacggtgcatgcgtgcagaacagcactatg 3550415
>emb|AL954825.3|CNS08CD1 Oryza sativa chromosome 12, . BAC OJ2007_H06 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 103647 Score = 71.9 bits (36), Expect = 2e-09 Identities = 123/152 (80%) Strand = Plus / Minus Query: 448 acctctccacaagggatccttgtattctgtcttacaagggctccggcagcaaccatccca 507 ||||||||| |||| |||||||| ||||| | ||||| | ||| ||| ||||||| | Sbjct: 65549 acctctccagaaggaatccttgtgttctgcttaacaagcgatcctgcaccaaccatgctg 65490 Query: 508 tgcttttctacaacaacaccatctaacagggttgctcccataccaacaaaagcttcatcc 567 |||||||| || || || ||||| | ||| || || |||||||||||||||||||||||| Sbjct: 65489 tgcttttcaacgaccactccatcaagcagagtggcacccataccaacaaaagcttcatcc 65430 Query: 568 tcaacagtgcatccttgtaatacagcactatg 599 || || |||||| | || | ||||||||||| Sbjct: 65429 tcgacggtgcatgcgtgcagaacagcactatg 65398
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 67.9 bits (34), Expect = 4e-08 Identities = 100/122 (81%) Strand = Plus / Plus Query: 448 acctctccacaagggatccttgtattctgtcttacaagggctccggcagcaaccatccca 507 ||||||||| |||| ||||| || || || ||||||||| ||| ||| ||||||| | Sbjct: 26722829 acctctccagaaggaatcctggtgttttgctttacaagggatcctgcaccaaccatgctg 26722888 Query: 508 tgcttttctacaacaacaccatctaacagggttgctcccataccaacaaaagcttcatcc 567 |||||||| || || || ||||| | ||| || || |||||||||||||||||||||||| Sbjct: 26722889 tgcttttcaaccaccactccatcaagcagagtggcacccataccaacaaaagcttcatcc 26722948 Query: 568 tc 569 || Sbjct: 26722949 tc 26722950
>emb|BX816589.1|CNS0ADBJ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH57ZD01 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1092 Score = 67.9 bits (34), Expect = 4e-08 Identities = 139/174 (79%) Strand = Plus / Minus Query: 397 atctcctcatctgtgagcttcctcagaaatttcgctgggtttccaccccatacctctcca 456 ||||| |||||||| | ||| |||| || || ||||| ||||| ||||| ||||||||| Sbjct: 677 atctcttcatctgttaactttctcatgaactttgctggatttcctccccacacctctcca 618 Query: 457 caagggatccttgtattctgtcttacaagggctccggcagcaaccatcccatgcttttct 516 ||||||| | || |||||| | ||||| | || ||||||||||| |||| || || Sbjct: 617 gaagggattcgcgtgttctgtttcacaagagaaccagcagcaaccatggcatgtttctca 558 Query: 517 acaacaacaccatctaacagggttgctcccataccaacaaaagcttcatcctca 570 || || |||||||| | || |||||||||||||||||||||| ||||||||| Sbjct: 557 accaccacaccatcaagtagttttgctcccataccaacaaaagcatcatcctca 504
>dbj|AP003765.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1003_C06 Length = 143168 Score = 67.9 bits (34), Expect = 4e-08 Identities = 100/122 (81%) Strand = Plus / Plus Query: 448 acctctccacaagggatccttgtattctgtcttacaagggctccggcagcaaccatccca 507 ||||||||| |||| ||||| || || || ||||||||| ||| ||| ||||||| | Sbjct: 69686 acctctccagaaggaatcctggtgttttgctttacaagggatcctgcaccaaccatgctg 69745 Query: 508 tgcttttctacaacaacaccatctaacagggttgctcccataccaacaaaagcttcatcc 567 |||||||| || || || ||||| | ||| || || |||||||||||||||||||||||| Sbjct: 69746 tgcttttcaaccaccactccatcaagcagagtggcacccataccaacaaaagcttcatcc 69805 Query: 568 tc 569 || Sbjct: 69806 tc 69807
>dbj|AP004671.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0524G08 Length = 146690 Score = 67.9 bits (34), Expect = 4e-08 Identities = 100/122 (81%) Strand = Plus / Plus Query: 448 acctctccacaagggatccttgtattctgtcttacaagggctccggcagcaaccatccca 507 ||||||||| |||| ||||| || || || ||||||||| ||| ||| ||||||| | Sbjct: 140433 acctctccagaaggaatcctggtgttttgctttacaagggatcctgcaccaaccatgctg 140492 Query: 508 tgcttttctacaacaacaccatctaacagggttgctcccataccaacaaaagcttcatcc 567 |||||||| || || || ||||| | ||| || || |||||||||||||||||||||||| Sbjct: 140493 tgcttttcaaccaccactccatcaagcagagtggcacccataccaacaaaagcttcatcc 140552 Query: 568 tc 569 || Sbjct: 140553 tc 140554
>emb|BX816366.1|CNS0ADBR Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH44ZA11 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1058 Score = 65.9 bits (33), Expect = 2e-07 Identities = 72/85 (84%) Strand = Plus / Minus Query: 541 gctcccataccaacaaaagcttcatcctcaacagtgcatccttgtaatacagcactatgt 600 |||||||||||||||||||| |||||||||| ||| || || || | | ||| || || Sbjct: 499 gctcccataccaacaaaagcatcatcctcaagagtacacccatgaatgagagcgctgtga 440 Query: 601 cctactgtgacattgtctccaatga 625 ||||||||||||||||| ||||||| Sbjct: 439 cctactgtgacattgtccccaatga 415
>dbj|AB013389.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K1F13 Length = 83511 Score = 44.1 bits (22), Expect = 0.55 Identities = 34/38 (89%) Strand = Plus / Plus Query: 562 tcatcctcaacagtgcatccttgtaatacagcactatg 599 |||||||| |||||||| || ||||| ||||||||||| Sbjct: 39375 tcatcctcgacagtgcagccatgtaaaacagcactatg 39412 Score = 44.1 bits (22), Expect = 0.55 Identities = 34/38 (89%) Strand = Plus / Plus Query: 414 cttcctcagaaatttcgctgggtttccaccccatacct 451 ||||||||||||||| |||||||| || ||||| |||| Sbjct: 39136 cttcctcagaaatttagctgggttgcctccccaaacct 39173
>gb|BC049182.1| Mus musculus hairless, mRNA (cDNA clone MGC:54518 IMAGE:6468299), complete cds Length = 5599 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 248 caagcatggaaccgtgttcctcgtcctgg 276 |||||| |||||| ||||||||||||||| Sbjct: 4372 caagcagggaaccttgttcctcgtcctgg 4400
>gb|BC040241.1| Homo sapiens WD repeat domain 41, mRNA (cDNA clone MGC:5405 IMAGE:3447269), complete cds Length = 2356 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 69 aattattgaaataatcttaaactgc 93 |||| |||||||||||||||||||| Sbjct: 1418 aatttttgaaataatcttaaactgc 1394
>ref|XM_797853.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053510153.10) partial mRNA Length = 1638 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 271 tcctggtgagcaactttcttc 291 ||||||||||||||||||||| Sbjct: 833 tcctggtgagcaactttcttc 813
>gb|AC122268.5| Mus musculus BAC clone RP23-216B15 from 14, complete sequence Length = 207136 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 248 caagcatggaaccgtgttcctcgtcctgg 276 |||||| |||||| ||||||||||||||| Sbjct: 196756 caagcagggaaccttgttcctcgtcctgg 196784
>ref|NM_021877.2| Mus musculus hairless (Hr), mRNA Length = 5599 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 248 caagcatggaaccgtgttcctcgtcctgg 276 |||||| |||||| ||||||||||||||| Sbjct: 4372 caagcagggaaccttgttcctcgtcctgg 4400
>gb|AC061709.25| Homo sapiens 12 BAC RP11-417O18 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 208524 Score = 42.1 bits (21), Expect = 2.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 28 tgtaagtgcatggtcagctttagnaaca 55 |||||||||||| |||||||||| |||| Sbjct: 171485 tgtaagtgcatgctcagctttagaaaca 171512
>gb|AC023595.19| Homo sapiens 12 BAC RP11-553N19 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 161578 Score = 42.1 bits (21), Expect = 2.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 28 tgtaagtgcatggtcagctttagnaaca 55 |||||||||||| |||||||||| |||| Sbjct: 117364 tgtaagtgcatgctcagctttagaaaca 117337
>emb|AL834138.1|HSM805349 Homo sapiens mRNA; cDNA DKFZp434J2114 (from clone DKFZp434J2114) Length = 3327 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 69 aattattgaaataatcttaaactgc 93 |||| |||||||||||||||||||| Sbjct: 2347 aatttttgaaataatcttaaactgc 2323
>emb|CR625903.1| full-length cDNA clone CS0DM014YF08 of Fetal liver of Homo sapiens (human) Length = 1643 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 69 aattattgaaataatcttaaactgc 93 |||| |||||||||||||||||||| Sbjct: 1614 aatttttgaaataatcttaaactgc 1590
>emb|CR616409.1| full-length cDNA clone CS0DL008YJ03 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) Length = 1654 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 69 aattattgaaataatcttaaactgc 93 |||| |||||||||||||||||||| Sbjct: 1593 aatttttgaaataatcttaaactgc 1569
>dbj|AK023977.1| Homo sapiens cDNA FLJ13915 fis, clone Y79AA1000328, weakly similar to SEL-10 PROTEIN Length = 2301 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 69 aattattgaaataatcttaaactgc 93 |||| |||||||||||||||||||| Sbjct: 1368 aatttttgaaataatcttaaactgc 1344
>dbj|AK021855.1| Homo sapiens cDNA FLJ11793 fis, clone HEMBA1006130, weakly similar to SEL-10 PROTEIN Length = 1941 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 69 aattattgaaataatcttaaactgc 93 |||| |||||||||||||||||||| Sbjct: 1452 aatttttgaaataatcttaaactgc 1428
>dbj|AK001766.1| Homo sapiens cDNA FLJ10904 fis, clone OVARC1000013, weakly similar to APOPTOTIC PROTEASE ACTIVATING FACTOR 1 Length = 2536 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 69 aattattgaaataatcttaaactgc 93 |||| |||||||||||||||||||| Sbjct: 1612 aatttttgaaataatcttaaactgc 1588
>gb|AC087633.5| Homo sapiens chromosome 15, clone RP11-255M2, complete sequence Length = 179163 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 404 catctgtgagcttcctcagaa 424 ||||||||||||||||||||| Sbjct: 45502 catctgtgagcttcctcagaa 45482
>ref|NM_018268.2| Homo sapiens WD repeat domain 41 (WDR41), mRNA Length = 2608 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 69 aattattgaaataatcttaaactgc 93 |||| |||||||||||||||||||| Sbjct: 1633 aatttttgaaataatcttaaactgc 1609
>gb|AC022422.5| Homo sapiens chromosome 5 clone CTD-2199L4, complete sequence Length = 245697 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 69 aattattgaaataatcttaaactgc 93 |||| |||||||||||||||||||| Sbjct: 179495 aatttttgaaataatcttaaactgc 179519
>dbj|AK076280.1| Mus musculus 0 day neonate skin cDNA, RIKEN full-length enriched library, clone:4632409G21 product:hairless, full insert sequence Length = 2969 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 248 caagcatggaaccgtgttcctcgtcctgg 276 |||||| |||||| ||||||||||||||| Sbjct: 1857 caagcagggaaccttgttcctcgtcctgg 1885
>emb|BX005061.9| Zebrafish DNA sequence from clone CH211-158F5 in linkage group 5, complete sequence Length = 155854 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 25 aactgtaagtgcatggtcagcttta 49 |||||||||| |||||||||||||| Sbjct: 84540 aactgtaagtacatggtcagcttta 84516
>gb|DQ000563.1| Synthetic construct clone PSF:109395 DKFZp434J2114 gene, complete cds Length = 690 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 69 aattattgaaataatcttaaactgc 93 |||| |||||||||||||||||||| Sbjct: 656 aatttttgaaataatcttaaactgc 632
>gb|AC154563.2| Mus musculus BAC clone RP23-401E22 from chromosome 14, complete sequence Length = 206798 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 248 caagcatggaaccgtgttcctcgtcctgg 276 |||||| |||||| ||||||||||||||| Sbjct: 150789 caagcagggaaccttgttcctcgtcctgg 150761
>gb|AC010234.5|AC010234 Homo sapiens chromosome 5 clone CTC-337B15, complete sequence Length = 143553 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 69 aattattgaaataatcttaaactgc 93 |||| |||||||||||||||||||| Sbjct: 124365 aatttttgaaataatcttaaactgc 124341
>gb|AF115511.1| Homo sapiens MSTP048 (MST048) mRNA, complete cds Length = 2388 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 69 aattattgaaataatcttaaactgc 93 |||| |||||||||||||||||||| Sbjct: 1414 aatttttgaaataatcttaaactgc 1390
>dbj|AB019228.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MCK7 Length = 87090 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 116 atataagaattcaaactgaag 136 ||||||||||||||||||||| Sbjct: 27034 atataagaattcaaactgaag 27014
>gb|BC001807.1| Homo sapiens cDNA clone IMAGE:3354734, containing frame-shift errors Length = 1713 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 69 aattattgaaataatcttaaactgc 93 |||| |||||||||||||||||||| Sbjct: 1620 aatttttgaaataatcttaaactgc 1596
>gb|AC136224.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0006B22, complete sequence Length = 166052 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 299 ctttctcaaaatcaatcttt 318 |||||||||||||||||||| Sbjct: 65184 ctttctcaaaatcaatcttt 65165
>gb|AE017354.1| Legionella pneumophila subsp. pneumophila str. Philadelphia 1, complete genome Length = 3397754 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 556 aaagcttcatcctcaacagtgcat 579 ||||||||||| |||||||||||| Sbjct: 1888620 aaagcttcatcgtcaacagtgcat 1888643
>gb|AC010921.12| Drosophila melanogaster clone BACR15L12, complete sequence Length = 163466 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 552 aacaaaagcttcatcctcaa 571 |||||||||||||||||||| Sbjct: 149011 aacaaaagcttcatcctcaa 149030
>gb|AC010922.10| Drosophila melanogaster clone BACR09H01, complete sequence Length = 152607 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 552 aacaaaagcttcatcctcaa 571 |||||||||||||||||||| Sbjct: 44267 aacaaaagcttcatcctcaa 44286
>gb|AC091454.2| Mus musculus chromosome X, clones RP21-438P10, RP21-382F2, RP21-118B24, Map qA7.1, complete sequences Length = 393632 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 569 caacagtgcatccttgtaat 588 |||||||||||||||||||| Sbjct: 184637 caacagtgcatccttgtaat 184656
>gb|AC135242.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0070D14, complete sequence Length = 174780 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 299 ctttctcaaaatcaatcttt 318 |||||||||||||||||||| Sbjct: 75891 ctttctcaaaatcaatcttt 75910
>emb|AL032621.1|CEY45F3A Caenorhabditis elegans YAC Y45F3A, complete sequence Length = 36654 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 426 tttcgctgggtttccacccc 445 |||||||||||||||||||| Sbjct: 24346 tttcgctgggtttccacccc 24327
>ref|XM_760984.1| Theileria parva strain Muguga chromosome 1 hypothetical protein (TP01_0558) partial mRNA Length = 1419 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 302 tctcaaaatcaatcttttcc 321 |||||||||||||||||||| Sbjct: 817 tctcaaaatcaatcttttcc 836
>gb|AE017245.1| Mycoplasma synoviae 53, complete genome Length = 799476 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 539 ttgctcccataccaacaaaa 558 |||||||||||||||||||| Sbjct: 728996 ttgctcccataccaacaaaa 729015
>emb|AL138726.12| Human DNA sequence from clone RP1-139G21 on chromosome 6 Contains (part of) the SLC17A1, SLC17A2 and SLC17A3 genes for the sodium phosphate solute carrier family 17 members 1, 2 and 3 and a H2A (histone 2A) pseudogene, complete sequence Length = 136646 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 cccaaaattattgaaataat 83 |||||||||||||||||||| Sbjct: 120015 cccaaaattattgaaataat 120034
>emb|AL023693.25|HS32B1 Human DNA sequence from clone RP1-32B1 on chromosome 6q22.33-23.3 Contains the MYB gene for v-myb myeloblastosis viral oncogene homolog (avian), 2 novel genes, the 3' end of a novel protein and a CpG island, complete sequence Length = 188287 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 cccaaaattattgaaataat 83 |||||||||||||||||||| Sbjct: 15312 cccaaaattattgaaataat 15331
>emb|X78201.1|SS17BED S.scrofa 17beta-estradiol dehydrogenase mRNA Length = 2886 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 472 ttctgtcttacaagggctcc 491 |||||||||||||||||||| Sbjct: 848 ttctgtcttacaagggctcc 829
>emb|CR628337.1| Legionella pneumophila str. Lens complete genome Length = 3345687 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 556 aaagcttcatcctcaacagtgcat 579 ||||||||||| |||||||||||| Sbjct: 1845788 aaagcttcatcgtcaacagtgcat 1845811
>emb|CR628336.1| Legionella pneumophila str. Paris complete genome Length = 3503610 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 556 aaagcttcatcctcaacagtgcat 579 ||||||||||| |||||||||||| Sbjct: 1866566 aaagcttcatcgtcaacagtgcat 1866589
>emb|AL604031.10| Mouse DNA sequence from clone RP23-24O5 on chromosome 11 Contains a ribosomal protein L13 (Rpl13) pseudogene, a novel gene and two CpG islands, complete sequence Length = 215675 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 65 ccaaaattattgaaataatc 84 |||||||||||||||||||| Sbjct: 46098 ccaaaattattgaaataatc 46117
>gb|AC117445.12| Homo sapiens 3 BAC RP11-278A4 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 31868 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 cccaaaattattgaaataat 83 |||||||||||||||||||| Sbjct: 5004 cccaaaattattgaaataat 4985
>gb|AC025586.4| Genomic sequence for Mus musculus, clone RP23-320C8, complete sequence Length = 185386 Score = 40.1 bits (20), Expect = 8.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 163 aggaacacagnataagcaaagct 185 |||||||||| |||||||||||| Sbjct: 31652 aggaacacagaataagcaaagct 31674
>ref|NM_132958.1| Drosophila melanogaster CG12433-RA (CG12433), mRNA Length = 1140 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 552 aacaaaagcttcatcctcaa 571 |||||||||||||||||||| Sbjct: 288 aacaaaagcttcatcctcaa 269
>gb|BT023403.1| Drosophila melanogaster IP10432 full insert cDNA Length = 1084 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 552 aacaaaagcttcatcctcaa 571 |||||||||||||||||||| Sbjct: 455 aacaaaagcttcatcctcaa 436
>gb|BT023343.1| Drosophila melanogaster IP10532 full insert cDNA Length = 1084 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 552 aacaaaagcttcatcctcaa 571 |||||||||||||||||||| Sbjct: 455 aacaaaagcttcatcctcaa 436
>gb|BT023287.1| Drosophila melanogaster IP10632 full insert cDNA Length = 1240 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 552 aacaaaagcttcatcctcaa 571 |||||||||||||||||||| Sbjct: 611 aacaaaagcttcatcctcaa 592
>gb|BT023207.1| Drosophila melanogaster IP10732 full insert cDNA Length = 1085 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 552 aacaaaagcttcatcctcaa 571 |||||||||||||||||||| Sbjct: 455 aacaaaagcttcatcctcaa 436
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 299 ctttctcaaaatcaatcttt 318 |||||||||||||||||||| Sbjct: 15082927 ctttctcaaaatcaatcttt 15082946
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 299 ctttctcaaaatcaatcttt 318 |||||||||||||||||||| Sbjct: 14729770 ctttctcaaaatcaatcttt 14729751
>ref|NM_214306.1| Sus scrofa 17beta-estradiol dehydrogenase (HSD17B4), mRNA Length = 2886 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 472 ttctgtcttacaagggctcc 491 |||||||||||||||||||| Sbjct: 848 ttctgtcttacaagggctcc 829
>dbj|AP000837.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0424A08 Length = 151294 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 299 ctttctcaaaatcaatcttt 318 |||||||||||||||||||| Sbjct: 15428 ctttctcaaaatcaatcttt 15447
>gb|AE003504.4| Drosophila melanogaster chromosome X, section 56 of 74 of the complete sequence Length = 298703 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 552 aacaaaagcttcatcctcaa 571 |||||||||||||||||||| Sbjct: 84912 aacaaaagcttcatcctcaa 84893
>emb|AL844511.14| Mouse DNA sequence from clone RP23-244B6 on chromosome 2, complete sequence Length = 144077 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 526 ccatctaacagggttgctcc 545 |||||||||||||||||||| Sbjct: 33156 ccatctaacagggttgctcc 33137
>emb|AL935163.7| Zebrafish DNA sequence from clone CH211-206K20, complete sequence Length = 158350 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 caaaattattgaaataatct 85 |||||||||||||||||||| Sbjct: 132636 caaaattattgaaataatct 132655
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 299 ctttctcaaaatcaatcttt 318 |||||||||||||||||||| Sbjct: 15164625 ctttctcaaaatcaatcttt 15164644
>emb|AL833776.9| Mouse DNA sequence from clone RP23-478M17 on chromosome X, complete sequence Length = 136414 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 569 caacagtgcatccttgtaat 588 |||||||||||||||||||| Sbjct: 119122 caacagtgcatccttgtaat 119141
>emb|AL592422.11| Mouse DNA sequence from clone RP23-218O16 on chromosome 11, complete sequence Length = 205668 Score = 40.1 bits (20), Expect = 8.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 163 aggaacacagnataagcaaagct 185 |||||||||| |||||||||||| Sbjct: 117011 aggaacacagaataagcaaagct 117033 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,135,556 Number of Sequences: 3902068 Number of extensions: 5135556 Number of successful extensions: 103111 Number of sequences better than 10.0: 102 Number of HSP's better than 10.0 without gapping: 103 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 102585 Number of HSP's gapped (non-prelim): 512 length of query: 632 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 609 effective length of database: 17,143,297,704 effective search space: 10440268301736 effective search space used: 10440268301736 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
