Clone Name | rbasd16i09 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | SRK6_BRAOE (Q09092) Putative serine/threonine-protein kinase rec... | 50 | 4e-06 | 2 | CLV1_ARATH (Q9SYQ8) Receptor protein kinase CLAVATA1 precursor (... | 32 | 1.2 | 3 | BAK1_ARATH (Q94F62) BRASSINOSTEROID INSENSITIVE 1-associated rec... | 30 | 4.7 | 4 | BRL2_ARATH (Q9ZPS9) Serine/threonine-protein kinase BRI1-like 2 ... | 30 | 4.7 |
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>SRK6_BRAOE (Q09092) Putative serine/threonine-protein kinase receptor| precursor (EC 2.7.11.1) (S-receptor kinase) (SRK) Length = 849 Score = 50.4 bits (119), Expect = 4e-06 Identities = 29/61 (47%), Positives = 35/61 (57%), Gaps = 1/61 (1%) Frame = -3 Query: 591 IHIALMCVQEHADDRPTMSNVVAMLNSENVILPEPKHPAYFNLRVSKE-DESGSVLCSYN 415 I I L+CVQE A+ RP MS+VV M SE +P+PK P Y R E D S S C N Sbjct: 782 IQIGLLCVQELAEHRPAMSSVVWMFGSEATEIPQPKPPGYCVRRSPYELDPSSSWQCDEN 841 Query: 414 D 412 + Sbjct: 842 E 842
>CLV1_ARATH (Q9SYQ8) Receptor protein kinase CLAVATA1 precursor (EC 2.7.11.1)| Length = 980 Score = 32.3 bits (72), Expect = 1.2 Identities = 15/25 (60%), Positives = 18/25 (72%) Frame = -3 Query: 585 IALMCVQEHADDRPTMSNVVAMLNS 511 IA+MCV+E A RPTM VV ML + Sbjct: 945 IAMMCVEEEAAARPTMREVVHMLTN 969
>BAK1_ARATH (Q94F62) BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1| precursor (EC 2.7.11.1) (BRI1-associated receptor kinase 1) (Somatic embryogenesis receptor-like kinase 3) Length = 615 Score = 30.4 bits (67), Expect = 4.7 Identities = 13/30 (43%), Positives = 18/30 (60%) Frame = -3 Query: 591 IHIALMCVQEHADDRPTMSNVVAMLNSENV 502 I +AL+C Q +RP MS VV ML + + Sbjct: 539 IQVALLCTQSSPMERPKMSEVVRMLEGDGL 568
>BRL2_ARATH (Q9ZPS9) Serine/threonine-protein kinase BRI1-like 2 precursor (EC| 2.7.11.1) (BRASSINOSTEROID INSENSITIVE 1-like protein 2) (Protein VASCULAR HIGHWAY 1) Length = 1143 Score = 30.4 bits (67), Expect = 4.7 Identities = 14/27 (51%), Positives = 16/27 (59%) Frame = -3 Query: 597 RYIHIALMCVQEHADDRPTMSNVVAML 517 RY+ IAL CV + RP M VVA L Sbjct: 1100 RYLEIALRCVDDFPSKRPNMLQVVASL 1126 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 80,335,362 Number of Sequences: 219361 Number of extensions: 1587862 Number of successful extensions: 3737 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 3612 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3733 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6029593548 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)