ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd16i09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_194045.1| Oryza sativa (japonica cultivar-group), predic... 90 1e-14
2dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 90 1e-14
3dbj|AP003856.4| Oryza sativa (japonica cultivar-group) genomic D... 90 1e-14
4dbj|AK064115.1| Oryza sativa (japonica cultivar-group) cDNA clon... 90 1e-14
5ref|NM_194772.1| Oryza sativa (japonica cultivar-group) putative... 42 2.2
6ref|NM_029337.1| Mus musculus E1A binding protein p400 (Ep400), ... 42 2.2
7gb|BC022153.1| Mus musculus E1A binding protein p400, mRNA (cDNA... 42 2.2
8gb|BC040256.1| Mus musculus E1A binding protein p400, mRNA (cDNA... 42 2.2
9emb|AL451107.6| Human DNA sequence from clone RP11-14C22 on chro... 42 2.2
10ref|XM_791947.1| PREDICTED: Strongylocentrotus purpuratus simila... 42 2.2
11gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome... 42 2.2
12gb|AC161348.2| Mus musculus chromosome 5, clone RP23-393E10, com... 42 2.2
13gb|AC074283.3| Oryza sativa chromosome 10 clone OSJNBa0087H07, c... 42 2.2
14dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.2
15dbj|AK122517.1| Mus musculus mRNA for mKIAA1498 protein 42 2.2
16ref|XM_222251.3| PREDICTED: Rattus norvegicus E1A binding protei... 42 2.2
17gb|AC134985.11| Mus musculus chromosome 5, clone RP24-432L3, com... 42 2.2
18gb|BC085511.1| Mus musculus E1A binding protein p400, mRNA (cDNA... 42 2.2
19dbj|AK120072.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.2
20dbj|AB092695.1| Mus musculus mRNA for mDomino-S, complete cds 42 2.2
21dbj|AB092694.1| Mus musculus mRNA for mDomino, complete cds 42 2.2
22gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 42 2.2
23ref|XM_482510.1| Oryza sativa (japonica cultivar-group), mRNA 40 8.8
24gb|AF377947.3| Oryza sativa (japonica cultivar-group) chromosome... 40 8.8
25gb|AC090426.1| Homo sapiens chromosome 17 clone 205m17 map 17q21... 40 8.8
26gb|AC007893.8| Drosophila melanogaster clone BACR02E15, complete... 40 8.8
27gb|BC076320.1| Danio rerio zgc:92858, mRNA (cDNA clone MGC:92858... 40 8.8
28gb|AC096689.5| Oryza sativa chromosome 3 BAC OSJNBa0027J18 genom... 40 8.8
29gb|AC103550.13| Oryza sativa chromosome 3 BAC OSJNBa0079G12 geno... 40 8.8
30gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete... 40 8.8
31gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 8.8
32gb|AC092556.8| Oryza sativa chromosome 3 BAC OSJNBa0047E24 genom... 40 8.8
33emb|CR456632.10| Zebrafish DNA sequence from clone CH211-86M22 i... 40 8.8
34gb|AC125187.4| Mus musculus BAC clone RP23-302N11 from chromosom... 40 8.8
35gb|AC004963.2| Homo sapiens PAC clone RP5-1102A12 from 7, comple... 40 8.8
36emb|CR318663.12| Zebrafish DNA sequence from clone CH211-214J5 i... 40 8.8
37gb|AC080112.15| Homo sapiens chromosome 17, clone CTD-2267D19, c... 40 8.8
38gb|AC018629.12| Homo sapiens chromosome 17, clone RP11-58O9, com... 40 8.8
39gb|AC135225.4| Oryza sativa chromosome 3 BAC OJ1112_G08 genomic ... 40 8.8
40gb|AF372703.1| Pseudomonas syringae pv. syringae putative DNA-bi... 40 8.8
41gb|AC141866.11| Medicago truncatula clone mth2-12p22, complete s... 40 8.8
42tpg|BK002711.1| TPA: TPA_inf: Drosophila melanogaster HDC14725 (... 40 8.8
43ref|NM_206585.1| Drosophila melanogaster CG31038-RE, transcript ... 40 8.8
44ref|NM_206584.1| Drosophila melanogaster CG31038-RF, transcript ... 40 8.8
45ref|NM_170449.2| Drosophila melanogaster CG31038-RD, transcript ... 40 8.8
46ref|NM_170448.1| Drosophila melanogaster CG31038-RB, transcript ... 40 8.8
47ref|NM_170447.1| Drosophila melanogaster CG31038-RA, transcript ... 40 8.8
48gb|AY069136.1| Drosophila melanogaster GH14951 full length cDNA 40 8.8
49dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.8
50dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.8
51gb|AC009348.6|AC009348 Drosophila melanogaster, chromosome 3R, r... 40 8.8
52gb|AC126392.4| Homo sapiens chromosome 17, clone RP11-1029F16, c... 40 8.8
53ref|NM_001002488.1| Danio rerio zgc:92858 (zgc:92858), mRNA 40 8.8
54dbj|AK121171.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.8
55dbj|AP004617.2| Oryza sativa (japonica cultivar-group) genomic D... 40 8.8
56gb|AF058697.1|AF058697 Oryza sativa MADS14 protein mRNA, complet... 40 8.8
57dbj|AK069331.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.8
58gb|AE003732.3| Drosophila melanogaster chromosome 3R, section 70... 40 8.8
59gb|AE003771.3| Drosophila melanogaster chromosome 3R, section 10... 40 8.8
60emb|AL929100.11| Mouse DNA sequence from clone RP23-436G18 on ch... 40 8.8
61gb|AC134606.4| Mus musculus BAC clone RP23-52K6 from 9, complete... 40 8.8 
>ref|NM_194045.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1698

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 111/133 (83%)
 Strand = Plus / Minus

                                                                        
Query: 455  gatacccttaggttgaagtatgccggatgtttaggctctggaagaataacattctcgctg 514
            ||||||||||||||| |||||||||| || ||||| || |||||||   || ||||||| 
Sbjct: 1616 gatacccttaggttgtagtatgccgggtgcttaggttcaggaagaaccgcactctcgcta 1557

                                                                        
Query: 515  tttaacattgcgacgacattcgacatggttggtcgatcgtctgcgtgctcttgtacgcac 574
             ||| ||| || |||||||  |||||||| |||||||| ||||||| |||||| ||||||
Sbjct: 1556 cttagcatcgctacgacatctgacatggtcggtcgatcatctgcgttctcttgcacgcac 1497

                         
Query: 575  attagtgcaatgt 587
            || || |||||||
Sbjct: 1496 ataagcgcaatgt 1484
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 111/133 (83%)
 Strand = Plus / Minus

                                                                            
Query: 455      gatacccttaggttgaagtatgccggatgtttaggctctggaagaataacattctcgctg 514
                ||||||||||||||| |||||||||| || ||||| || |||||||   || ||||||| 
Sbjct: 14950597 gatacccttaggttgtagtatgccgggtgcttaggttcaggaagaaccgcactctcgcta 14950538

                                                                            
Query: 515      tttaacattgcgacgacattcgacatggttggtcgatcgtctgcgtgctcttgtacgcac 574
                 ||| ||| || |||||||  |||||||| |||||||| ||||||| |||||| ||||||
Sbjct: 14950537 cttagcatcgctacgacatctgacatggtcggtcgatcatctgcgttctcttgcacgcac 14950478

                             
Query: 575      attagtgcaatgt 587
                || || |||||||
Sbjct: 14950477 ataagcgcaatgt 14950465
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>dbj|AP003856.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0697D09
          Length = 158479

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 111/133 (83%)
 Strand = Plus / Minus

                                                                          
Query: 455    gatacccttaggttgaagtatgccggatgtttaggctctggaagaataacattctcgctg 514
              ||||||||||||||| |||||||||| || ||||| || |||||||   || ||||||| 
Sbjct: 135423 gatacccttaggttgtagtatgccgggtgcttaggttcaggaagaaccgcactctcgcta 135364

                                                                          
Query: 515    tttaacattgcgacgacattcgacatggttggtcgatcgtctgcgtgctcttgtacgcac 574
               ||| ||| || |||||||  |||||||| |||||||| ||||||| |||||| ||||||
Sbjct: 135363 cttagcatcgctacgacatctgacatggtcggtcgatcatctgcgttctcttgcacgcac 135304

                           
Query: 575    attagtgcaatgt 587
              || || |||||||
Sbjct: 135303 ataagcgcaatgt 135291
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>dbj|AK064115.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-102-A04, full
            insert sequence
          Length = 2602

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 111/133 (83%)
 Strand = Plus / Minus

                                                                        
Query: 455  gatacccttaggttgaagtatgccggatgtttaggctctggaagaataacattctcgctg 514
            ||||||||||||||| |||||||||| || ||||| || |||||||   || ||||||| 
Sbjct: 2013 gatacccttaggttgtagtatgccgggtgcttaggttcaggaagaaccgcactctcgcta 1954

                                                                        
Query: 515  tttaacattgcgacgacattcgacatggttggtcgatcgtctgcgtgctcttgtacgcac 574
             ||| ||| || |||||||  |||||||| |||||||| ||||||| |||||| ||||||
Sbjct: 1953 cttagcatcgctacgacatctgacatggtcggtcgatcatctgcgttctcttgcacgcac 1894

                         
Query: 575  attagtgcaatgt 587
            || || |||||||
Sbjct: 1893 ataagcgcaatgt 1881
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>ref|NM_194772.1| Oryza sativa (japonica cultivar-group) putative protein kinase
            (OSJNBa0087H07.9), mRNA
          Length = 1968

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 54/65 (83%)
 Strand = Plus / Minus

                                                                        
Query: 511  gctgtttaacattgcgacgacattcgacatggttggtcgatcgtctgcgtgctcttgtac 570
            |||| ||| |||||| || ||||  |||||||||||||||||  |||| | |||||||||
Sbjct: 1836 gctgcttagcattgcaacaacatctgacatggttggtcgatcagctgcattctcttgtac 1777

                 
Query: 571  gcaca 575
             ||||
Sbjct: 1776 acaca 1772
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>ref|NM_029337.1| Mus musculus E1A binding protein p400 (Ep400), mRNA
          Length = 10623

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 91   cagcagccaccaccaccagtg 111
            |||||||||||||||||||||
Sbjct: 7413 cagcagccaccaccaccagtg 7433
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>gb|BC022153.1| Mus musculus E1A binding protein p400, mRNA (cDNA clone
            IMAGE:5116582), partial cds
          Length = 5012

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 91   cagcagccaccaccaccagtg 111
            |||||||||||||||||||||
Sbjct: 1813 cagcagccaccaccaccagtg 1833
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>gb|BC040256.1| Mus musculus E1A binding protein p400, mRNA (cDNA clone
            IMAGE:5043759), partial cds
          Length = 4077

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 91   cagcagccaccaccaccagtg 111
            |||||||||||||||||||||
Sbjct: 1268 cagcagccaccaccaccagtg 1288
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>emb|AL451107.6| Human DNA sequence from clone RP11-14C22 on chromosome 10 Contains the
             gene for a novel protein similar to lysozyme C-1 (1
             4-beta-N-acylmuramidase C EC 3.2.1.17) (MGC33408), three
             novel genes and a supervillin pseudogene (SVIL), complete
             sequence
          Length = 172779

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 337   ctgaagcaaagtgatcaacta 357
             |||||||||||||||||||||
Sbjct: 98637 ctgaagcaaagtgatcaacta 98617
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>ref|XM_791947.1| PREDICTED: Strongylocentrotus purpuratus similar to zn-finger, CCHC
           type and RNA-directed DNA polymerase  and Integrase,
           catalytic domain containing protein (3J949) (LOC592423),
           partial mRNA
          Length = 4681

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 91  cagcagccaccaccaccagtg 111
           |||||||||||||||||||||
Sbjct: 73  cagcagccaccaccaccagtg 93
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>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone
               Pseudo10p0.0-10p4.4, complete sequence
          Length = 2331000

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 54/65 (83%)
 Strand = Plus / Minus

                                                                           
Query: 511     gctgtttaacattgcgacgacattcgacatggttggtcgatcgtctgcgtgctcttgtac 570
               |||| ||| |||||| || ||||  |||||||||||||||||  |||| | |||||||||
Sbjct: 2241292 gctgcttagcattgcaacaacatctgacatggttggtcgatcagctgcattctcttgtac 2241233

                    
Query: 571     gcaca 575
                ||||
Sbjct: 2241232 acaca 2241228
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>gb|AC161348.2| Mus musculus chromosome 5, clone RP23-393E10, complete sequence
          Length = 221768

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 91     cagcagccaccaccaccagtg 111
              |||||||||||||||||||||
Sbjct: 101189 cagcagccaccaccaccagtg 101169
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>gb|AC074283.3| Oryza sativa chromosome 10 clone OSJNBa0087H07, complete sequence
          Length = 156654

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 54/65 (83%)
 Strand = Plus / Minus

                                                                         
Query: 511   gctgtttaacattgcgacgacattcgacatggttggtcgatcgtctgcgtgctcttgtac 570
             |||| ||| |||||| || ||||  |||||||||||||||||  |||| | |||||||||
Sbjct: 66946 gctgcttagcattgcaacaacatctgacatggttggtcgatcagctgcattctcttgtac 66887

                  
Query: 571   gcaca 575
              ||||
Sbjct: 66886 acaca 66882
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 54/65 (83%)
 Strand = Plus / Minus

                                                                           
Query: 511     gctgtttaacattgcgacgacattcgacatggttggtcgatcgtctgcgtgctcttgtac 570
               |||| ||| |||||| || ||||  |||||||||||||||||  |||| | |||||||||
Sbjct: 2241292 gctgcttagcattgcaacaacatctgacatggttggtcgatcagctgcattctcttgtac 2241233

                    
Query: 571     gcaca 575
                ||||
Sbjct: 2241232 acaca 2241228
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>dbj|AK122517.1| Mus musculus mRNA for mKIAA1498 protein
          Length = 6380

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 91   cagcagccaccaccaccagtg 111
            |||||||||||||||||||||
Sbjct: 3212 cagcagccaccaccaccagtg 3232
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>ref|XM_222251.3| PREDICTED: Rattus norvegicus E1A binding protein p400 (predicted)
            (Ep400_predicted), mRNA
          Length = 11061

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 91   cagcagccaccaccaccagtg 111
            |||||||||||||||||||||
Sbjct: 8029 cagcagccaccaccaccagtg 8049
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>gb|AC134985.11| Mus musculus chromosome 5, clone RP24-432L3, complete sequence
          Length = 199782

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 91   cagcagccaccaccaccagtg 111
            |||||||||||||||||||||
Sbjct: 2802 cagcagccaccaccaccagtg 2822
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>gb|BC085511.1| Mus musculus E1A binding protein p400, mRNA (cDNA clone
           IMAGE:6812734), partial cds
          Length = 3381

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 91  cagcagccaccaccaccagtg 111
           |||||||||||||||||||||
Sbjct: 169 cagcagccaccaccaccagtg 189
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>dbj|AK120072.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013006F14, full
            insert sequence
          Length = 2203

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 54/65 (83%)
 Strand = Plus / Minus

                                                                        
Query: 511  gctgtttaacattgcgacgacattcgacatggttggtcgatcgtctgcgtgctcttgtac 570
            |||| ||| |||||| || ||||  |||||||||||||||||  |||| | |||||||||
Sbjct: 1867 gctgcttagcattgcaacaacatctgacatggttggtcgatcagctgcattctcttgtac 1808

                 
Query: 571  gcaca 575
             ||||
Sbjct: 1807 acaca 1803
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>dbj|AB092695.1| Mus musculus mRNA for mDomino-S, complete cds
          Length = 10515

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 91   cagcagccaccaccaccagtg 111
            |||||||||||||||||||||
Sbjct: 7305 cagcagccaccaccaccagtg 7325
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>dbj|AB092694.1| Mus musculus mRNA for mDomino, complete cds
          Length = 10623

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 91   cagcagccaccaccaccagtg 111
            |||||||||||||||||||||
Sbjct: 7413 cagcagccaccaccaccagtg 7433
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 54/65 (83%)
 Strand = Plus / Minus

                                                                           
Query: 511     gctgtttaacattgcgacgacattcgacatggttggtcgatcgtctgcgtgctcttgtac 570
               |||| ||| |||||| || ||||  |||||||||||||||||  |||| | |||||||||
Sbjct: 2241243 gctgcttagcattgcaacaacatctgacatggttggtcgatcagctgcattctcttgtac 2241184

                    
Query: 571     gcaca 575
                ||||
Sbjct: 2241183 acaca 2241179
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>ref|XM_482510.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 717

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 92  agcagccaccaccaccagtg 111
           ||||||||||||||||||||
Sbjct: 669 agcagccaccaccaccagtg 650
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>gb|AF377947.3| Oryza sativa (japonica cultivar-group) chromosome 3, BAC clone
             OSJNBa0032E21, complete sequence
          Length = 137580

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 91    cagcagccaccaccaccagt 110
             ||||||||||||||||||||
Sbjct: 54812 cagcagccaccaccaccagt 54831
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>gb|AC090426.1| Homo sapiens chromosome 17 clone 205m17 map 17q21.1, complete sequence
          Length = 138999

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 90    tcagcagccaccaccaccag 109
             ||||||||||||||||||||
Sbjct: 88508 tcagcagccaccaccaccag 88489
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>gb|AC007893.8| Drosophila melanogaster clone BACR02E15, complete sequence
          Length = 182430

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 89     atcagcagccaccaccacca 108
              ||||||||||||||||||||
Sbjct: 107524 atcagcagccaccaccacca 107543
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>gb|BC076320.1| Danio rerio zgc:92858, mRNA (cDNA clone MGC:92858 IMAGE:7117034),
            complete cds
          Length = 1794

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 254  caaaatatgatatacatgtg 273
            ||||||||||||||||||||
Sbjct: 1403 caaaatatgatatacatgtg 1384
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>gb|AC096689.5| Oryza sativa chromosome 3 BAC OSJNBa0027J18 genomic sequence, complete
             sequence
          Length = 112892

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 600   tagcctctgctgcatggatc 619
             ||||||||||||||||||||
Sbjct: 97095 tagcctctgctgcatggatc 97114
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>gb|AC103550.13| Oryza sativa chromosome 3 BAC OSJNBa0079G12 genomic sequence, complete
             sequence
          Length = 163712

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 600   tagcctctgctgcatggatc 619
             ||||||||||||||||||||
Sbjct: 19011 tagcctctgctgcatggatc 19030
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>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome
          Length = 6093698

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 298     gcctgcctgttgtctgattg 317
               ||||||||||||||||||||
Sbjct: 3042037 gcctgcctgttgtctgattg 3042018
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 91       cagcagccaccaccaccagt 110
                ||||||||||||||||||||
Sbjct: 30748971 cagcagccaccaccaccagt 30748952



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 600      tagcctctgctgcatggatc 619
                ||||||||||||||||||||
Sbjct: 29752366 tagcctctgctgcatggatc 29752347
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>gb|AC092556.8| Oryza sativa chromosome 3 BAC OSJNBa0047E24 genomic sequence, complete
             sequence
          Length = 157970

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 91    cagcagccaccaccaccagt 110
             ||||||||||||||||||||
Sbjct: 13420 cagcagccaccaccaccagt 13439
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>emb|CR456632.10| Zebrafish DNA sequence from clone CH211-86M22 in linkage group 12,
             complete sequence
          Length = 173539

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 254   caaaatatgatatacatgtg 273
             ||||||||||||||||||||
Sbjct: 48454 caaaatatgatatacatgtg 48435
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>gb|AC125187.4| Mus musculus BAC clone RP23-302N11 from chromosome 7, complete sequence
          Length = 247402

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 108    agtggaaaacaatgatgcgg 127
              ||||||||||||||||||||
Sbjct: 183006 agtggaaaacaatgatgcgg 183025
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>gb|AC004963.2| Homo sapiens PAC clone RP5-1102A12 from 7, complete sequence
          Length = 173627

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 255    aaaatatgatatacatgtgc 274
              ||||||||||||||||||||
Sbjct: 153405 aaaatatgatatacatgtgc 153386
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>emb|CR318663.12| Zebrafish DNA sequence from clone CH211-214J5 in linkage group 12,
              complete sequence
          Length = 215046

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 254    caaaatatgatatacatgtg 273
              ||||||||||||||||||||
Sbjct: 134058 caaaatatgatatacatgtg 134077
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>gb|AC080112.15| Homo sapiens chromosome 17, clone CTD-2267D19, complete sequence
          Length = 175014

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 90    tcagcagccaccaccaccag 109
             ||||||||||||||||||||
Sbjct: 72430 tcagcagccaccaccaccag 72411
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>gb|AC018629.12| Homo sapiens chromosome 17, clone RP11-58O9, complete sequence
          Length = 166234

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 90   tcagcagccaccaccaccag 109
            ||||||||||||||||||||
Sbjct: 6310 tcagcagccaccaccaccag 6329
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>gb|AC135225.4| Oryza sativa chromosome 3 BAC OJ1112_G08 genomic sequence, complete
             sequence
          Length = 128294

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 91    cagcagccaccaccaccagt 110
             ||||||||||||||||||||
Sbjct: 57672 cagcagccaccaccaccagt 57653
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>gb|AF372703.1| Pseudomonas syringae pv. syringae putative DNA-binding regulatory
             protein SyrF (syrF), putative outer membrane protein,
             putative periplasmic protein, putative DNA-binding
             regulatory protein SyrG (syrG), and putative DNA-binding
             protein SalA (salA) genes, complete cds; and unknown genes
          Length = 20741

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 298   gcctgcctgttgtctgattg 317
             ||||||||||||||||||||
Sbjct: 20492 gcctgcctgttgtctgattg 20511
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>gb|AC141866.11| Medicago truncatula clone mth2-12p22, complete sequence
          Length = 126907

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 246   ttcagaaccaaaatatgata 265
             ||||||||||||||||||||
Sbjct: 42454 ttcagaaccaaaatatgata 42473
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>tpg|BK002711.1| TPA: TPA_inf: Drosophila melanogaster HDC14725 (HDC14725) gene,
           complete cds
          Length = 1240

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 102 accaccagtggaaaacaatg 121
           ||||||||||||||||||||
Sbjct: 343 accaccagtggaaaacaatg 324
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>ref|NM_206585.1| Drosophila melanogaster CG31038-RE, transcript variant E (CG31038),
           mRNA
          Length = 3311

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 89  atcagcagccaccaccacca 108
           ||||||||||||||||||||
Sbjct: 499 atcagcagccaccaccacca 518
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>ref|NM_206584.1| Drosophila melanogaster CG31038-RF, transcript variant F (CG31038),
           mRNA
          Length = 3370

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 89  atcagcagccaccaccacca 108
           ||||||||||||||||||||
Sbjct: 558 atcagcagccaccaccacca 577
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>ref|NM_170449.2| Drosophila melanogaster CG31038-RD, transcript variant D (CG31038),
            mRNA
          Length = 4240

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 89   atcagcagccaccaccacca 108
            ||||||||||||||||||||
Sbjct: 1310 atcagcagccaccaccacca 1329
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>ref|NM_170448.1| Drosophila melanogaster CG31038-RB, transcript variant B (CG31038),
           mRNA
          Length = 3492

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 89  atcagcagccaccaccacca 108
           ||||||||||||||||||||
Sbjct: 562 atcagcagccaccaccacca 581
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>ref|NM_170447.1| Drosophila melanogaster CG31038-RA, transcript variant A (CG31038),
           mRNA
          Length = 3374

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 89  atcagcagccaccaccacca 108
           ||||||||||||||||||||
Sbjct: 562 atcagcagccaccaccacca 581
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>gb|AY069136.1| Drosophila melanogaster GH14951 full length cDNA
          Length = 4233

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 89   atcagcagccaccaccacca 108
            ||||||||||||||||||||
Sbjct: 1303 atcagcagccaccaccacca 1322
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 92       agcagccaccaccaccagtg 111
                ||||||||||||||||||||
Sbjct: 20738215 agcagccaccaccaccagtg 20738196
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 91       cagcagccaccaccaccagt 110
                ||||||||||||||||||||
Sbjct: 30840394 cagcagccaccaccaccagt 30840375



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 600      tagcctctgctgcatggatc 619
                ||||||||||||||||||||
Sbjct: 29843788 tagcctctgctgcatggatc 29843769
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>gb|AC009348.6|AC009348 Drosophila melanogaster, chromosome 3R, region 93A-93B, BAC clone
             BACR05I01, complete sequence
          Length = 187151

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 102   accaccagtggaaaacaatg 121
             ||||||||||||||||||||
Sbjct: 19345 accaccagtggaaaacaatg 19326
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>gb|AC126392.4| Homo sapiens chromosome 17, clone RP11-1029F16, complete sequence
          Length = 37350

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 90   tcagcagccaccaccaccag 109
            ||||||||||||||||||||
Sbjct: 4863 tcagcagccaccaccaccag 4844
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>ref|NM_001002488.1| Danio rerio zgc:92858 (zgc:92858), mRNA
          Length = 1794

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 254  caaaatatgatatacatgtg 273
            ||||||||||||||||||||
Sbjct: 1403 caaaatatgatatacatgtg 1384
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>dbj|AK121171.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023081C04, full
           insert sequence
          Length = 1784

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 91  cagcagccaccaccaccagt 110
           ||||||||||||||||||||
Sbjct: 132 cagcagccaccaccaccagt 151
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>dbj|AP004617.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0479C08
          Length = 152460

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 92     agcagccaccaccaccagtg 111
              ||||||||||||||||||||
Sbjct: 110668 agcagccaccaccaccagtg 110649
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>gb|AF058697.1|AF058697 Oryza sativa MADS14 protein mRNA, complete cds
          Length = 1373

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 91  cagcagccaccaccaccagt 110
           ||||||||||||||||||||
Sbjct: 115 cagcagccaccaccaccagt 134
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>dbj|AK069331.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023019N01, full
           insert sequence
          Length = 1284

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 91  cagcagccaccaccaccagt 110
           ||||||||||||||||||||
Sbjct: 135 cagcagccaccaccaccagt 154
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>gb|AE003732.3| Drosophila melanogaster chromosome 3R, section 70 of 118 of the complete
              sequence
          Length = 224529

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 102    accaccagtggaaaacaatg 121
              ||||||||||||||||||||
Sbjct: 167677 accaccagtggaaaacaatg 167658
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>gb|AE003771.3| Drosophila melanogaster chromosome 3R, section 109 of 118 of the complete
              sequence
          Length = 242528

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 89     atcagcagccaccaccacca 108
              ||||||||||||||||||||
Sbjct: 144456 atcagcagccaccaccacca 144475
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>emb|AL929100.11| Mouse DNA sequence from clone RP23-436G18 on chromosome 2, complete
              sequence
          Length = 196372

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 300    ctgcctgttgtctgattgct 319
              ||||||||||||||||||||
Sbjct: 151914 ctgcctgttgtctgattgct 151895
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>gb|AC134606.4| Mus musculus BAC clone RP23-52K6 from 9, complete sequence
          Length = 171495

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 294    gtctgcctgcctgttgtctg 313
              ||||||||||||||||||||
Sbjct: 104912 gtctgcctgcctgttgtctg 104893


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,540,077
Number of Sequences: 3902068
Number of extensions: 5540077
Number of successful extensions: 104416
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 64
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 104090
Number of HSP's gapped (non-prelim): 326
length of query: 644
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 621
effective length of database: 17,143,297,704
effective search space: 10645987874184
effective search space used: 10645987874184
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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