ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd16i08 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_196336.1| Oryza sativa (japonica cultivar-group) putative F-box protein family (OSJNAa0011L09.13), mRNA Length = 3459 Score = 60.0 bits (30), Expect = 9e-06 Identities = 63/74 (85%) Strand = Plus / Minus Query: 518 gcgctggcggcagatgccaaccccggcgccccagagacagtgcaagctccagctcctccc 577 |||||| ||||| |||||| || || |||||||| ||||| || |||||||||||||||| Sbjct: 151 gcgctgccggcaaatgccaccctcgccgccccagcgacagcgcgagctccagctcctccc 92 Query: 578 gcgcttcctcgtcc 591 | || ||| ||||| Sbjct: 91 gtgcctccccgtcc 78 Score = 40.1 bits (20), Expect = 8.5 Identities = 50/60 (83%) Strand = Plus / Minus Query: 255 cactttaggacgtttattctgcaggtcccgctctccatcctcactcccctcctcttcctc 314 |||||| || |||||| ||||||| |||| |||||||||||| |||||||| ||||| Sbjct: 393 cactttgggccgtttactctgcagatccctgtctccatcctcatctccctcctcgtcctc 334
>gb|AC122144.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAa0011L09, complete sequence Length = 121055 Score = 60.0 bits (30), Expect = 9e-06 Identities = 63/74 (85%) Strand = Plus / Plus Query: 518 gcgctggcggcagatgccaaccccggcgccccagagacagtgcaagctccagctcctccc 577 |||||| ||||| |||||| || || |||||||| ||||| || |||||||||||||||| Sbjct: 84542 gcgctgccggcaaatgccaccctcgccgccccagcgacagcgcgagctccagctcctccc 84601 Query: 578 gcgcttcctcgtcc 591 | || ||| ||||| Sbjct: 84602 gtgcctccccgtcc 84615 Score = 40.1 bits (20), Expect = 8.5 Identities = 50/60 (83%) Strand = Plus / Plus Query: 255 cactttaggacgtttattctgcaggtcccgctctccatcctcactcccctcctcttcctc 314 |||||| || |||||| ||||||| |||| |||||||||||| |||||||| ||||| Sbjct: 84300 cactttgggccgtttactctgcagatccctgtctccatcctcatctccctcctcgtcctc 84359
>gb|AC108884.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare clone OSJNBb0058B20 from chromosome 10, complete sequence Length = 156232 Score = 60.0 bits (30), Expect = 9e-06 Identities = 63/74 (85%) Strand = Plus / Minus Query: 518 gcgctggcggcagatgccaaccccggcgccccagagacagtgcaagctccagctcctccc 577 |||||| ||||| |||||| || || |||||||| ||||| || |||||||||||||||| Sbjct: 132746 gcgctgccggcaaatgccaccctcgccgccccagcgacagcgcgagctccagctcctccc 132687 Query: 578 gcgcttcctcgtcc 591 | || ||| ||||| Sbjct: 132686 gtgcctccccgtcc 132673 Score = 40.1 bits (20), Expect = 8.5 Identities = 50/60 (83%) Strand = Plus / Minus Query: 255 cactttaggacgtttattctgcaggtcccgctctccatcctcactcccctcctcttcctc 314 |||||| || |||||| ||||||| |||| |||||||||||| |||||||| ||||| Sbjct: 132988 cactttgggccgtttactctgcagatccctgtctccatcctcatctccctcctcgtcctc 132929
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 60.0 bits (30), Expect = 9e-06 Identities = 63/74 (85%) Strand = Plus / Plus Query: 518 gcgctggcggcagatgccaaccccggcgccccagagacagtgcaagctccagctcctccc 577 |||||| ||||| |||||| || || |||||||| ||||| || |||||||||||||||| Sbjct: 12788103 gcgctgccggcaaatgccaccctcgccgccccagcgacagcgcgagctccagctcctccc 12788162 Query: 578 gcgcttcctcgtcc 591 | || ||| ||||| Sbjct: 12788163 gtgcctccccgtcc 12788176 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 290 catcctcactcccctcctcttc 311 |||||||||||||||||||||| Sbjct: 17206569 catcctcactcccctcctcttc 17206590 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 288 tccatcctcactcccctcctc 308 ||||||||||||||||||||| Sbjct: 13920393 tccatcctcactcccctcctc 13920413 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 508 ggcggtgccggcgctggcgg 527 |||||||||||||||||||| Sbjct: 22596785 ggcggtgccggcgctggcgg 22596804 Score = 40.1 bits (20), Expect = 8.5 Identities = 50/60 (83%) Strand = Plus / Plus Query: 255 cactttaggacgtttattctgcaggtcccgctctccatcctcactcccctcctcttcctc 314 |||||| || |||||| ||||||| |||| |||||||||||| |||||||| ||||| Sbjct: 12787861 cactttgggccgtttactctgcagatccctgtctccatcctcatctccctcctcgtcctc 12787920
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 60.0 bits (30), Expect = 9e-06 Identities = 63/74 (85%) Strand = Plus / Plus Query: 518 gcgctggcggcagatgccaaccccggcgccccagagacagtgcaagctccagctcctccc 577 |||||| ||||| |||||| || || |||||||| ||||| || |||||||||||||||| Sbjct: 12795444 gcgctgccggcaaatgccaccctcgccgccccagcgacagcgcgagctccagctcctccc 12795503 Query: 578 gcgcttcctcgtcc 591 | || ||| ||||| Sbjct: 12795504 gtgcctccccgtcc 12795517 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 290 catcctcactcccctcctcttc 311 |||||||||||||||||||||| Sbjct: 17215609 catcctcactcccctcctcttc 17215630 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 288 tccatcctcactcccctcctc 308 ||||||||||||||||||||| Sbjct: 13927735 tccatcctcactcccctcctc 13927755 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 508 ggcggtgccggcgctggcgg 527 |||||||||||||||||||| Sbjct: 22609253 ggcggtgccggcgctggcgg 22609272 Score = 40.1 bits (20), Expect = 8.5 Identities = 50/60 (83%) Strand = Plus / Plus Query: 255 cactttaggacgtttattctgcaggtcccgctctccatcctcactcccctcctcttcctc 314 |||||| || |||||| ||||||| |||| |||||||||||| |||||||| ||||| Sbjct: 12795202 cactttgggccgtttactctgcagatccctgtctccatcctcatctccctcctcgtcctc 12795261
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 48.1 bits (24), Expect = 0.035 Identities = 24/24 (100%) Strand = Plus / Minus Query: 497 cgggtgccggcggcggtgccggcg 520 |||||||||||||||||||||||| Sbjct: 340569 cgggtgccggcggcggtgccggcg 340546 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 499 ggtgccggcggcggtgccggcgctggcggca 529 ||||||||||||| || |||||||||||||| Sbjct: 2957229 ggtgccggcggcgctggcggcgctggcggca 2957199 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 506 gcggcggtgccggcgctggcggcag 530 |||||| |||||||||||||||||| Sbjct: 1121184 gcggcgctgccggcgctggcggcag 1121160
>emb|BX842572.1| Mycobacterium tuberculosis H37Rv complete genome; segment 1/13 Length = 341957 Score = 48.1 bits (24), Expect = 0.035 Identities = 24/24 (100%) Strand = Plus / Minus Query: 497 cgggtgccggcggcggtgccggcg 520 |||||||||||||||||||||||| Sbjct: 340507 cgggtgccggcggcggtgccggcg 340484
>emb|BX248334.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 1/14 Length = 343050 Score = 48.1 bits (24), Expect = 0.035 Identities = 24/24 (100%) Strand = Plus / Minus Query: 497 cgggtgccggcggcggtgccggcg 520 |||||||||||||||||||||||| Sbjct: 341509 cgggtgccggcggcggtgccggcg 341486
>ref|XM_474182.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1224 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Plus Query: 498 gggtgccggcggcggtgccggcgctggcggc 528 ||||| ||||||||||| ||||||||||||| Sbjct: 44 gggtgtcggcggcggtggcggcgctggcggc 74
>emb|BX248343.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 10/14 Length = 307550 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 499 ggtgccggcggcggtgccggcgctggcggca 529 ||||||||||||| || |||||||||||||| Sbjct: 111047 ggtgccggcggcgctggcggcgctggcggca 111017
>emb|BX842580.1| Mycobacterium tuberculosis H37Rv complete genome; segment 9/13 Length = 346051 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 499 ggtgccggcggcggtgccggcgctggcggca 529 ||||||||||||| || |||||||||||||| Sbjct: 188049 ggtgccggcggcgctggcggcgctggcggca 188019
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 498 gggtgccggcggcggtgccggcgctggcggc 528 ||||| ||||||||||| ||||||||||||| Sbjct: 33562078 gggtgtcggcggcggtggcggcgctggcggc 33562048
>emb|AL606685.3|OSJN00090 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0071I13, complete sequence Length = 152264 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 498 gggtgccggcggcggtgccggcgctggcggc 528 ||||| ||||||||||| ||||||||||||| Sbjct: 138367 gggtgtcggcggcggtggcggcgctggcggc 138337
>gb|AD000019.1|MSGY223 Mycobacterium tuberculosis sequence from clone y223 Length = 42061 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Plus Query: 499 ggtgccggcggcggtgccggcgctggcggca 529 ||||||||||||| || |||||||||||||| Sbjct: 21587 ggtgccggcggcgctggcggcgctggcggca 21617
>gb|AC113249.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0041L19, complete sequence Length = 155086 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Plus Query: 504 cggcggcggtgccggcgctggcggca 529 |||||||||||||||||| ||||||| Sbjct: 21827 cggcggcggtgccggcgccggcggca 21852
>gb|AC010028.8| Drosophila melanogaster 3L BAC RP98-1E20 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 187489 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 501 tgccggcggcggtgccggcgctggcggcag 530 |||||||||||| | ||||||||||||||| Sbjct: 140911 tgccggcggcggcggcggcgctggcggcag 140940
>gb|AY118913.1| Drosophila melanogaster LD21748 full insert cDNA Length = 2043 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Minus Query: 501 tgccggcggcggtgccggcgctggcggcag 530 |||||||||||| | ||||||||||||||| Sbjct: 285 tgccggcggcggcggcggcgctggcggcag 256
>gb|AE011656.1| Xanthomonas axonopodis pv. citri str. 306, section 34 of 469 of the complete genome Length = 10029 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Plus Query: 499 ggtgccggcggcggtgccggcgctgg 524 |||||||||||||||| ||||||||| Sbjct: 7399 ggtgccggcggcggtggcggcgctgg 7424
>ref|NM_140056.2| Drosophila melanogaster CG3891-RA (CG3891), mRNA Length = 2041 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Minus Query: 501 tgccggcggcggtgccggcgctggcggcag 530 |||||||||||| | ||||||||||||||| Sbjct: 310 tgccggcggcggcggcggcgctggcggcag 281
>gb|AC078893.10| Oryza sativa chromosome 10 BAC OSJNBb0044B19 genomic sequence, complete sequence Length = 81784 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 290 catcctcactcccctcctcttc 311 |||||||||||||||||||||| Sbjct: 41031 catcctcactcccctcctcttc 41010
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Plus Query: 504 cggcggcggtgccggcgctggcggca 529 |||||||||||||||||| ||||||| Sbjct: 24544925 cggcggcggtgccggcgccggcggca 24544950 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 27 aaagtacaaatattaaattat 47 ||||||||||||||||||||| Sbjct: 18293039 aaagtacaaatattaaattat 18293019
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Minus Query: 504 cggcggcggtgccggcgctggcggca 529 |||||||||||| ||||||||||||| Sbjct: 7058879 cggcggcggtgcaggcgctggcggca 7058854
>gb|AE003552.4| Drosophila melanogaster chromosome 3L, section 33 of 83 of the complete sequence Length = 286770 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 501 tgccggcggcggtgccggcgctggcggcag 530 |||||||||||| | ||||||||||||||| Sbjct: 251508 tgccggcggcggcggcggcgctggcggcag 251537
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Plus Query: 504 cggcggcggtgccggcgctggcggca 529 |||||||||||||||||| ||||||| Sbjct: 24856595 cggcggcggtgccggcgccggcggca 24856620 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 27 aaagtacaaatattaaattat 47 ||||||||||||||||||||| Sbjct: 18452440 aaagtacaaatattaaattat 18452420
>ref|XM_476783.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1913 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 505 ggcggcggtgccggcgctggc 525 ||||||||||||||||||||| Sbjct: 616 ggcggcggtgccggcgctggc 636
>ref|XM_476782.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2040 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 505 ggcggcggtgccggcgctggc 525 ||||||||||||||||||||| Sbjct: 654 ggcggcggtgccggcgctggc 674
>ref|XM_507353.1| PREDICTED Oryza sativa (japonica cultivar-group), P0496D04.23-2 mRNA Length = 2082 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 505 ggcggcggtgccggcgctggc 525 ||||||||||||||||||||| Sbjct: 654 ggcggcggtgccggcgctggc 674
>ref|XM_506190.1| PREDICTED Oryza sativa (japonica cultivar-group), P0496D04.23-2 mRNA Length = 2082 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 505 ggcggcggtgccggcgctggc 525 ||||||||||||||||||||| Sbjct: 654 ggcggcggtgccggcgctggc 674
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 341 cagcgcctcctgcatcagcgt 361 ||||||||||||||||||||| Sbjct: 3061870 cagcgcctcctgcatcagcgt 3061890 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 509 gcggtgccggcgctggcggc 528 |||||||||||||||||||| Sbjct: 1957226 gcggtgccggcgctggcggc 1957207
>gb|AC027660.2| Oryza sativa (japonica cultivar-group) chromosome 10 clone BAC nbxb0045B21, complete sequence Length = 152397 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 288 tccatcctcactcccctcctc 308 ||||||||||||||||||||| Sbjct: 89019 tccatcctcactcccctcctc 89039
>gb|AC134926.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0056I10, complete sequence Length = 158833 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 27 aaagtacaaatattaaattat 47 ||||||||||||||||||||| Sbjct: 28404 aaagtacaaatattaaattat 28384
>gb|AY658968.1| Synthetic construct Peudomonas aeruginosa clone FLH042578.01F PA2407 gene, partial cds Length = 954 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 474 gaagaccatcgaccatctcaaggcg 498 ||||||||||||||| ||||||||| Sbjct: 735 gaagaccatcgaccagctcaaggcg 759
>emb|CR388406.7| Zebrafish DNA sequence from clone CH211-288H2 in linkage group 1, complete sequence Length = 161800 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 101 aaaatgacatcaagtgacaat 121 ||||||||||||||||||||| Sbjct: 23055 aaaatgacatcaagtgacaat 23075
>emb|AL008726.3|HS337O18 Human DNA sequence from clone RP3-337O18 on chromosome 20q12-13.1 Contains the PLPT gene for phospholipid transfer protein, the PPGB gene for protective protein for beta-galactosidase (galactosialidosis), the PTE1 gene for peroxisomal acyl-CoA thioesterase, the C20orf161 gene, the C20orf162 gene, the C20orf163, the C20orf164 gene, the C20orf165 gene, the 5' end of an variant of the TNNC2 gene for fast troponin C2 and three CpG islands, complete sequence Length = 86080 Score = 42.1 bits (21), Expect = 2.2 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Plus Query: 284 gctctccatc-ctcactcccctcctcttc 311 |||||||||| |||||||||||||||||| Sbjct: 8408 gctctccatctctcactcccctcctcttc 8436
>emb|BX842575.1| Mycobacterium tuberculosis H37Rv complete genome; segment 4/13 Length = 349306 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 506 gcggcggtgccggcgctggcggcag 530 |||||| |||||||||||||||||| Sbjct: 87359 gcggcgctgccggcgctggcggcag 87335
>emb|BX248337.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 4/14 Length = 327650 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 506 gcggcggtgccggcgctggcggcag 530 |||||| |||||||||||||||||| Sbjct: 134597 gcggcgctgccggcgctggcggcag 134573
>gb|AC110871.6| Homo sapiens 3 BAC RP11-639B4 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 97110 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 27 aaagtacaaatattaaattatctctacca 55 |||||||||| |||||||||||| ||||| Sbjct: 67443 aaagtacaaagattaaattatctttacca 67471
>gb|AC011090.9| Homo sapiens chromosome 17, clone CTD-2005K23, complete sequence Length = 94042 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 39 ttaaattatctctaccacactccct 63 |||||||||||| |||||||||||| Sbjct: 1159 ttaaattatctccaccacactccct 1183
>gb|AF406785.1|AF406785 Nosema locustae checkpoint protein kinase (chk1), pyruvate dehydrogenase E1 alpha subunit (pdhA), pyruvate dehydrogenase E1 beta subunit (pdhB), and calmodulin-dependent protein kinase (cmpk) genes, complete cds; and unknown genes Length = 7079 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 273 ctgcaggtcccgctctccatc 293 ||||||||||||||||||||| Sbjct: 6377 ctgcaggtcccgctctccatc 6357
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 505 ggcggcggtgccggcgctggc 525 ||||||||||||||||||||| Sbjct: 3881823 ggcggcggtgccggcgctggc 3881803
>gb|AC157532.2| Pan troglodytes BAC clone CH251-305A6 from chromosome unknown, complete sequence Length = 204179 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 294 ctcactcccctcctcttcctc 314 ||||||||||||||||||||| Sbjct: 53227 ctcactcccctcctcttcctc 53207
>gb|AE004668.1| Pseudomonas aeruginosa PAO1, section 229 of 529 of the complete genome Length = 11069 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 474 gaagaccatcgaccatctcaaggcg 498 ||||||||||||||| ||||||||| Sbjct: 3587 gaagaccatcgaccagctcaaggcg 3611
>gb|AF540993.1| Pseudomonas aeruginosa isolate 2-164 pyoverdin biosynthetic locus, partial sequence Length = 77740 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 474 gaagaccatcgaccatctcaaggcg 498 ||||||||||||||| ||||||||| Sbjct: 74294 gaagaccatcgaccagctcaaggcg 74318
>dbj|AP004670.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0496D04 Length = 197358 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 505 ggcggcggtgccggcgctggc 525 ||||||||||||||||||||| Sbjct: 120935 ggcggcggtgccggcgctggc 120915
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 503 ccggcggcggtgccggcgctg 523 ||||||||||||||||||||| Sbjct: 6812276 ccggcggcggtgccggcgctg 6812296
>dbj|AK098899.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002B06, full insert sequence Length = 2083 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 505 ggcggcggtgccggcgctggc 525 ||||||||||||||||||||| Sbjct: 655 ggcggcggtgccggcgctggc 675
>dbj|AK098856.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000J22, full insert sequence Length = 2040 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 505 ggcggcggtgccggcgctggc 525 ||||||||||||||||||||| Sbjct: 654 ggcggcggtgccggcgctggc 674
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 474 gaagaccatcgaccatctcaaggcg 498 ||||||||||||||| ||||||||| Sbjct: 3500679 gaagaccatcgaccagctcaaggcg 3500703 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 563 gctccagctcctcccgcgcttcct 586 ||||||||||| |||||||||||| Sbjct: 5707391 gctccagctccacccgcgcttcct 5707368
>dbj|AK065275.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002L11, full insert sequence Length = 2082 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 505 ggcggcggtgccggcgctggc 525 ||||||||||||||||||||| Sbjct: 654 ggcggcggtgccggcgctggc 674
>dbj|AK061624.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-C04, full insert sequence Length = 1939 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 505 ggcggcggtgccggcgctggc 525 ||||||||||||||||||||| Sbjct: 616 ggcggcggtgccggcgctggc 636
>gb|AC005771.1|AC005771 Homo sapiens chromosome 17, clone hRPK.1058_G_23, complete sequence Length = 190434 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 39 ttaaattatctctaccacactccct 63 |||||||||||| |||||||||||| Sbjct: 9564 ttaaattatctccaccacactccct 9540
>ref|NM_100436.2| Arabidopsis thaliana CALS1 (CALLOSE SYNTHASE 1); transferase, transferring glycosyl groups AT1G05570 (CALS1) mRNA, complete cds Length = 6022 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 117 acaatcattgcctgcaaaca 136 |||||||||||||||||||| Sbjct: 1493 acaatcattgcctgcaaaca 1474
>ref|XM_470102.1| Oryza sativa (japonica cultivar-group), mRNA Length = 807 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 508 ggcggtgccggcgctggcgg 527 |||||||||||||||||||| Sbjct: 12 ggcggtgccggcgctggcgg 31
>ref|XM_467464.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2665 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 185 acacagctgcaagcctgcaa 204 |||||||||||||||||||| Sbjct: 2111 acacagctgcaagcctgcaa 2092
>ref|NM_197912.1| Oryza sativa (japonica cultivar-group) putative peptide transporter (OSJNBa0056G17.8), mRNA Length = 1748 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 508 ggcggtgccggcgctggcgg 527 |||||||||||||||||||| Sbjct: 1316 ggcggtgccggcgctggcgg 1335
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 501 tgccggcggcggtgccggcg 520 |||||||||||||||||||| Sbjct: 2238541 tgccggcggcggtgccggcg 2238560
>ref|XM_463602.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1197 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 522 tggcggcagatgccaaccccggcg 545 ||||||||||||||||||| |||| Sbjct: 815 tggcggcagatgccaacccaggcg 792
>gb|AC145811.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0088L13 map near C50029S, complete sequence Length = 129900 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 292 tcctcactcccctcctcttcctcg 315 ||||||||||||||||| |||||| Sbjct: 53390 tcctcactcccctcctcctcctcg 53367
>gb|BC077876.1| Xenopus laevis MGC80640 protein, mRNA (cDNA clone MGC:80640 IMAGE:5506599), complete cds Length = 1562 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 122 cattgcctgcaaacagggct 141 |||||||||||||||||||| Sbjct: 582 cattgcctgcaaacagggct 601
>gb|AC095996.9| Rattus norvegicus 18 BAC CH230-13K4 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 54068 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 390 gaacctgagtggagggacag 409 |||||||||||||||||||| Sbjct: 39663 gaacctgagtggagggacag 39682
>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome Length = 3814139 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 488 atctcaaggcgggtgccggcggcg 511 |||||||||| ||||||||||||| Sbjct: 3204618 atctcaaggccggtgccggcggcg 3204641
>ref|XM_676656.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN8479.2), mRNA Length = 2706 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 225 cctttgaggaacttactcgc 244 |||||||||||||||||||| Sbjct: 2396 cctttgaggaacttactcgc 2415
>gb|AC149058.7| Mus musculus BAC clone RP23-338G5 from chromosome 7, complete sequence Length = 219369 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 287 ctccatcctcactcccctcc 306 |||||||||||||||||||| Sbjct: 202178 ctccatcctcactcccctcc 202197
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 508 ggcggtgccggcgctggcgg 527 |||||||||||||||||||| Sbjct: 33942185 ggcggtgccggcgctggcgg 33942166 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 292 tcctcactcccctcctcttcctcg 315 ||||||||||||||||| |||||| Sbjct: 24818155 tcctcactcccctcctcctcctcg 24818132 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 93 actgcatgaaaatgacatca 112 |||||||||||||||||||| Sbjct: 9736083 actgcatgaaaatgacatca 9736102
>gb|AC146545.2| Gasterosteus aculeatus clone CH213-80P16, complete sequence Length = 195850 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 492 caaggcgggtgccggcggcggtgc 515 |||||||| ||||||||||||||| Sbjct: 49010 caaggcggttgccggcggcggtgc 48987
>gb|AC121788.3| Mus musculus BAC clone RP23-395N2 from chromosome 10, complete sequence Length = 196144 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 295 tcactcccctcctcttcctc 314 |||||||||||||||||||| Sbjct: 95683 tcactcccctcctcttcctc 95702
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 503 ccggcggcggtgccggcgctggcg 526 |||||||||||||||||| ||||| Sbjct: 99725 ccggcggcggtgccggcggtggcg 99748
>gb|AY459336.1| Oryza sativa (japonica cultivar-group) clone CL034244.2 R2R3-MYB gene region Length = 65993 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 ctgcaagcctgcaatgcaat 210 |||||||||||||||||||| Sbjct: 27924 ctgcaagcctgcaatgcaat 27943
>gb|AC090543.12| Homo sapiens chromosome 15, clone RP11-330L19, complete sequence Length = 209421 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 215 agaatagcagcctttgagga 234 |||||||||||||||||||| Sbjct: 9156 agaatagcagcctttgagga 9175
>gb|AC125224.3| Mus musculus BAC clone RP23-33N8 from 17, complete sequence Length = 195968 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 31 tacaaatattaaattatctc 50 |||||||||||||||||||| Sbjct: 9256 tacaaatattaaattatctc 9237
>gb|AC124574.4| Mus musculus BAC clone RP23-160J13 from 7, complete sequence Length = 176188 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ctccatcctcactcccctcc 306 |||||||||||||||||||| Sbjct: 119938 ctccatcctcactcccctcc 119919
>emb|CR712415.2|CNS0GCNF Tetraodon nigroviridis full-length cDNA Length = 407 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 184 cacacagctgcaagcctgca 203 |||||||||||||||||||| Sbjct: 327 cacacagctgcaagcctgca 308
>emb|CR708639.2|CNS0G9QJ Tetraodon nigroviridis full-length cDNA Length = 742 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 184 cacacagctgcaagcctgca 203 |||||||||||||||||||| Sbjct: 143 cacacagctgcaagcctgca 162
>emb|CR706561.2|CNS0G84T Tetraodon nigroviridis full-length cDNA Length = 742 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 184 cacacagctgcaagcctgca 203 |||||||||||||||||||| Sbjct: 143 cacacagctgcaagcctgca 162
>ref|XM_535212.2| PREDICTED: Canis familiaris similar to WD repeat domain 55 (LOC478033), mRNA Length = 1852 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 290 catcctcactcccctcctcttcct 313 ||||||||||| |||||||||||| Sbjct: 1203 catcctcactctcctcctcttcct 1180
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 501 tgccggcggcggtgccggcgctgg 524 |||||||||||||||||| ||||| Sbjct: 3900647 tgccggcggcggtgccggtgctgg 3900670
>gb|AC091231.10| Homo sapiens chromosome 15, clone RP11-702L15, complete sequence Length = 187779 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 215 agaatagcagcctttgagga 234 |||||||||||||||||||| Sbjct: 41262 agaatagcagcctttgagga 41243
>gb|AC084405.6| Oryza sativa chromosome 3 BAC OSJNBa0044H10 genomic sequence, complete sequence Length = 165113 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 93 actgcatgaaaatgacatca 112 |||||||||||||||||||| Sbjct: 156982 actgcatgaaaatgacatca 157001
>emb|BX640445.1| Bordetella bronchiseptica strain RB50, complete genome; segment 9/16 Length = 348706 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 502 gccggcggcggtgccggcgc 521 |||||||||||||||||||| Sbjct: 121943 gccggcggcggtgccggcgc 121962
>emb|BX640431.1| Bordetella parapertussis strain 12822, complete genome; segment 9/14 Length = 347894 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 502 gccggcggcggtgccggcgc 521 |||||||||||||||||||| Sbjct: 158243 gccggcggcggtgccggcgc 158224
>emb|AL646093.9| Mouse DNA sequence from clone RP23-55I2 on chromosome 11 Contains the Kcnj12 gene for potassium inwardly-rectifying channel subfamily J member 12, a ribosomal protein L27a (Rpl27a) pseudogene, the Tnfrsf13b gene for tumor necrosis factor receptor superfamily member 13b, the Usp22 gene for ubiquitin specific protease 22, a ribosomal protein S13 (Rps13) pseudogene, the Aldh3a1 gene for aldehyde dehydrogenase family 3 subfamily A1, the 3' end of one variant of the Aldh3a2 gene for aldehyde dehydrogenase family 3 subfamily A2 and three CpG islands, complete sequence Length = 241400 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 294 ctcactcccctcctcttcct 313 |||||||||||||||||||| Sbjct: 148384 ctcactcccctcctcttcct 148403
>emb|AL606525.7| Mouse DNA sequence from clone RP23-235J20 on chromosome 13 Contains five novel genes and a CpG island, complete sequence Length = 187348 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 117 acaatcattgcctgcaaaca 136 |||||||||||||||||||| Sbjct: 96406 acaatcattgcctgcaaaca 96387
>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome Length = 3046682 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 346 cctcctgcatcagcgtttgcgcca 369 |||||||||||||||||| ||||| Sbjct: 2528934 cctcctgcatcagcgtttccgcca 2528957
>dbj|AK126639.1| Homo sapiens cDNA FLJ44681 fis, clone BRACE3010086, moderately similar to Homo sapiens chondroitin sulfate proteoglycan 3 (neurocan) (CSPG3) Length = 4481 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 285 ctctccatcctcactcccctcctc 308 |||||||||||| ||||||||||| Sbjct: 931 ctctccatcctccctcccctcctc 954
>gb|AC010424.9| Homo sapiens chromosome 5 clone CTD-2195M15, complete sequence Length = 192282 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 tgaaagtacaaatattaaat 44 |||||||||||||||||||| Sbjct: 176172 tgaaagtacaaatattaaat 176191
>gb|AC087726.36| Chlamydomonas reinhardtii clone cr-40a20, complete sequence Length = 168794 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 499 ggtgccggcggcggtgccgg 518 |||||||||||||||||||| Sbjct: 69097 ggtgccggcggcggtgccgg 69116
>gb|AE011634.1| Xanthomonas axonopodis pv. citri str. 306, section 12 of 469 of the complete genome Length = 13286 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 503 ccggcggcggtgccggcgctggcg 526 |||||||||||||||||| ||||| Sbjct: 7386 ccggcggcggtgccggcggtggcg 7409
>gb|AE012458.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 366 of 460 of the complete genome Length = 13464 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 509 gcggtgccggcgctggcggc 528 |||||||||||||||||||| Sbjct: 8392 gcggtgccggcgctggcggc 8373
>emb|AL731878.4|CNS08C8I Oryza sativa chromosome 3, . BAC OSJNBb0116P11 of library OSJNBb from chromosome 3 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 128559 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 292 tcctcactcccctcctcttcctcg 315 ||||||||||||||||| |||||| Sbjct: 105106 tcctcactcccctcctcctcctcg 105083
>gb|AC096759.3| Homo sapiens BAC clone RP11-567N4 from 4, complete sequence Length = 196363 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 aagtacaaatattaaattat 47 |||||||||||||||||||| Sbjct: 195979 aagtacaaatattaaattat 195998
>gb|AC108939.3| Homo sapiens BAC clone RP11-703H20 from 4, complete sequence Length = 3994 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 aagtacaaatattaaattat 47 |||||||||||||||||||| Sbjct: 1616 aagtacaaatattaaattat 1635
>gb|AC024569.5| Homo sapiens chromosome 5 clone CTD-2188H20, complete sequence Length = 193547 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 213 aaagaatagcagcctttgag 232 |||||||||||||||||||| Sbjct: 137887 aaagaatagcagcctttgag 137868
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome Length = 3561584 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 273 ctgcaggtcccgctctccatcctc 296 |||| ||||||||||||||||||| Sbjct: 1903027 ctgctggtcccgctctccatcctc 1903004
>gb|AC027654.3| Mus musculus strain C57BL6/J chromosome 6 clone RP23-219K14, complete sequence Length = 223678 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 155 aaatccaccaaacatatttg 174 |||||||||||||||||||| Sbjct: 82375 aaatccaccaaacatatttg 82356
>dbj|AK163911.1| Mus musculus 0 day neonate cerebellum cDNA, RIKEN full-length enriched library, clone:C230045C18 product:Cortactin-binding protein 2 homolog (Fragment) homolog [Mus musculus], full insert sequence Length = 4094 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 155 aaatccaccaaacatatttg 174 |||||||||||||||||||| Sbjct: 2943 aaatccaccaaacatatttg 2962
>gb|AC020977.6| Homo sapiens chromosome 5 clone RP11-92M7, complete sequence Length = 156105 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 213 aaagaatagcagcctttgag 232 |||||||||||||||||||| Sbjct: 120379 aaagaatagcagcctttgag 120360
>gb|AC018727.10| Oryza sativa chromosome 10 BAC OSJNBa0056G17 genomic sequence, complete sequence Length = 139999 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 508 ggcggtgccggcgctggcgg 527 |||||||||||||||||||| Sbjct: 51454 ggcggtgccggcgctggcgg 51473
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 498 gggtgccggcggcggtgccggcgc 521 ||||||||||||||||| |||||| Sbjct: 3723963 gggtgccggcggcggtgacggcgc 3723940
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 509 gcggtgccggcgctggcggc 528 |||||||||||||||||||| Sbjct: 920782 gcggtgccggcgctggcggc 920801
>gb|AF237733.1|AF237733 Arabidopsis thaliana callose synthase 1 catalytic subunit (CalS1) mRNA, complete cds Length = 6007 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 117 acaatcattgcctgcaaaca 136 |||||||||||||||||||| Sbjct: 1493 acaatcattgcctgcaaaca 1474
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 ctgcaagcctgcaatgcaat 210 |||||||||||||||||||| Sbjct: 27522907 ctgcaagcctgcaatgcaat 27522926
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 502 gccggcggcggtgccggcgctggcggca 529 ||||||||||| |||||||| ||||||| Sbjct: 7156753 gccggcggcggcgccggcgccggcggca 7156780
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 507 cggcggtgccggcgctggcg 526 |||||||||||||||||||| Sbjct: 15568118 cggcggtgccggcgctggcg 15568099
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 508 ggcggtgccggcgctggcgg 527 |||||||||||||||||||| Sbjct: 34032657 ggcggtgccggcgctggcgg 34032638 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 292 tcctcactcccctcctcttcctcg 315 ||||||||||||||||| |||||| Sbjct: 24909478 tcctcactcccctcctcctcctcg 24909455 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 93 actgcatgaaaatgacatca 112 |||||||||||||||||||| Sbjct: 9734204 actgcatgaaaatgacatca 9734223
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 185 acacagctgcaagcctgcaa 204 |||||||||||||||||||| Sbjct: 29692959 acacagctgcaagcctgcaa 29692940
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 522 tggcggcagatgccaaccccggcg 545 ||||||||||||||||||| |||| Sbjct: 39637333 tggcggcagatgccaacccaggcg 39637356
>gb|AC025910.19|AC025910 Mus musculus 11 BAC RP23-40J4 (Roswell Park Cancer Institute Mouse BAC) complete sequence Length = 240536 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 294 ctcactcccctcctcttcct 313 |||||||||||||||||||| Sbjct: 172059 ctcactcccctcctcttcct 172040
>gb|AC133007.4| Oryza sativa chromosome 3 BAC OSJNBa0094J08 genomic sequence, complete sequence Length = 172337 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 508 ggcggtgccggcgctggcgg 527 |||||||||||||||||||| Sbjct: 115506 ggcggtgccggcgctggcgg 115525
>dbj|AP003416.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0456E05 Length = 173699 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 522 tggcggcagatgccaaccccggcg 545 ||||||||||||||||||| |||| Sbjct: 118289 tggcggcagatgccaacccaggcg 118312
>gb|AC011995.8| Homo sapiens BAC clone RP11-163G21 from 2, complete sequence Length = 151605 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 gaaaccatactgcatgaaaa 104 |||||||||||||||||||| Sbjct: 18940 gaaaccatactgcatgaaaa 18959
>gb|AC138430.2| Homo sapiens chromosome 19 clone LLNLR-259H9, complete sequence Length = 43185 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 285 ctctccatcctcactcccctcctc 308 |||||||||||| ||||||||||| Sbjct: 25966 ctctccatcctccctcccctcctc 25943
>gb|AC005866.4| Homo sapiens 12 BAC RP11-407G6 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 119388 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 289 ccatcctcactcccctcctc 308 |||||||||||||||||||| Sbjct: 71040 ccatcctcactcccctcctc 71021
>gb|AE014133.1| Streptococcus mutans UA159, complete genome Length = 2030921 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 113 agtgacaatcattgcctgca 132 |||||||||||||||||||| Sbjct: 1969525 agtgacaatcattgcctgca 1969544
>dbj|AK186001.1| Mus musculus cDNA, clone:Y0G0135O21, strand:unspecified Length = 439 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 504 cggcggcggtgccggcgctggcggcaga 531 |||||||| |||||||||||||||||| Sbjct: 435 cggcggcgcggccggcgctggcggcaga 408
>dbj|AP004047.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1191_G08 Length = 172832 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 185 acacagctgcaagcctgcaa 204 |||||||||||||||||||| Sbjct: 61938 acacagctgcaagcctgcaa 61919
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 505 ggcggcggtgccggcgctggcggc 528 |||||||||||||||| ||||||| Sbjct: 2685133 ggcggcggtgccggcggtggcggc 2685110
>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome Length = 3147090 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 495 ggcgggtgccggcggcggtg 514 |||||||||||||||||||| Sbjct: 2365429 ggcgggtgccggcggcggtg 2365410
>dbj|AP004995.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0068B06 Length = 143712 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 502 gccggcggcggtgccggcgctggcggca 529 ||||||||||| |||||||| ||||||| Sbjct: 34164 gccggcggcggcgccggcgccggcggca 34191
>gb|AC158663.2| Mus musculus BAC RP23-16J8 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 216101 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 155 aaatccaccaaacatatttg 174 |||||||||||||||||||| Sbjct: 198476 aaatccaccaaacatatttg 198457
>gb|AE005066.1| Halobacterium sp. NRC-1 section 97 of 170 of the complete genome Length = 11460 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 502 gccggcggcggtgccggcgc 521 |||||||||||||||||||| Sbjct: 2504 gccggcggcggtgccggcgc 2523
>dbj|AP003912.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1479_B11 Length = 105702 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 ctgcaagcctgcaatgcaat 210 |||||||||||||||||||| Sbjct: 5197 ctgcaagcctgcaatgcaat 5216
>dbj|AP006265.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1112_E06 Length = 95069 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 ctgcaagcctgcaatgcaat 210 |||||||||||||||||||| Sbjct: 86156 ctgcaagcctgcaatgcaat 86175
>dbj|AK105726.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-G10, full insert sequence Length = 1942 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 508 ggcggtgccggcgctggcgg 527 |||||||||||||||||||| Sbjct: 1373 ggcggtgccggcgctggcgg 1392
>dbj|AK099267.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023018P15, full insert sequence Length = 1938 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 508 ggcggtgccggcgctggcgg 527 |||||||||||||||||||| Sbjct: 1363 ggcggtgccggcgctggcgg 1382
>dbj|AK099219.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013086I05, full insert sequence Length = 1880 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 508 ggcggtgccggcgctggcgg 527 |||||||||||||||||||| Sbjct: 1381 ggcggtgccggcgctggcgg 1400
>dbj|AK071618.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023104J18, full insert sequence Length = 916 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 508 ggcggtgccggcgctggcgg 527 |||||||||||||||||||| Sbjct: 143 ggcggtgccggcgctggcgg 162
>dbj|AK070855.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023066G02, full insert sequence Length = 2664 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 185 acacagctgcaagcctgcaa 204 |||||||||||||||||||| Sbjct: 2110 acacagctgcaagcctgcaa 2091
>dbj|AK070527.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023060H09, full insert sequence Length = 1950 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 508 ggcggtgccggcgctggcgg 527 |||||||||||||||||||| Sbjct: 1381 ggcggtgccggcgctggcgg 1400
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 475 aagaccatcgaccatctcaaggcg 498 |||||||||||||| ||||||||| Sbjct: 4330338 aagaccatcgaccagctcaaggcg 4330361
>dbj|AP000851.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-817J15, complete sequences Length = 172981 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ctccatcctcactcccctcc 306 |||||||||||||||||||| Sbjct: 84242 ctccatcctcactcccctcc 84223
>gb|BC089274.1| Xenopus laevis cDNA clone MGC:84886 IMAGE:3745202, complete cds Length = 1436 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 122 cattgcctgcaaacagggct 141 |||||||||||||||||||| Sbjct: 544 cattgcctgcaaacagggct 563
>gb|AC144739.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0049D13, complete sequence Length = 136942 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 507 cggcggtgccggcgctggcg 526 |||||||||||||||||||| Sbjct: 99948 cggcggtgccggcgctggcg 99929
>gb|AC005254.1|AC005254 Homo sapiens chromosome 19, long range PCR product from cosmid R29861, complete sequence Length = 20988 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 285 ctctccatcctcactcccctcctc 308 |||||||||||| ||||||||||| Sbjct: 6283 ctctccatcctccctcccctcctc 6306
>gb|AC151272.2| Mus musculus BAC clone RP24-208G22 from 17, complete sequence Length = 148109 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 aaagtacaaatattaaatta 46 |||||||||||||||||||| Sbjct: 130941 aaagtacaaatattaaatta 130922
>emb|CT009635.18| Mouse DNA sequence from clone RP23-109E18 on chromosome 17, complete sequence Length = 216634 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 31 tacaaatattaaattatctc 50 |||||||||||||||||||| Sbjct: 82589 tacaaatattaaattatctc 82608
>gb|AF510367.1| Mesorhizobium sp. Wif-1 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 1017 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 103 aatgacatcaagtgacaatc 122 |||||||||||||||||||| Sbjct: 843 aatgacatcaagtgacaatc 862 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,824,243 Number of Sequences: 3902068 Number of extensions: 5824243 Number of successful extensions: 135433 Number of sequences better than 10.0: 136 Number of HSP's better than 10.0 without gapping: 146 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 132361 Number of HSP's gapped (non-prelim): 3073 length of query: 625 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 602 effective length of database: 17,143,297,704 effective search space: 10320265217808 effective search space used: 10320265217808 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
