ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd16h20
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1G13B_DICDI (P34116) Cell surface glycoprotein gp138B precursor 33 0.79
2Y251_BRUSU (P67568) UPF0262 protein BR0251 31 3.9
3Y1669_BRUME (P67567) UPF0262 protein BMEI1669 31 3.9
4PAR4_HUMAN (Q96RI0) Proteinase-activated receptor 4 precursor (P... 30 5.1
5G3ST2_HUMAN (Q9H3Q3) Galactose-3-O-sulfotransferase 2 (EC 2.8.2.... 30 5.1
6Y2025_ARCFU (O28254) Hypothetical protein AF2025 30 8.7
7G3ST2_PIG (Q6XQG9) Galactose 3-O-sulfotransferase 2 (EC 2.8.2.-)... 30 8.7

>G13B_DICDI (P34116) Cell surface glycoprotein gp138B precursor|
          Length = 734

 Score = 33.1 bits (74), Expect = 0.79
 Identities = 17/41 (41%), Positives = 24/41 (58%)
 Frame = +2

Query: 269 SHVQENFL*LSQNQVLRSSGSCKLSQGGNHAGSCALPEHLL 391
           S+ + N+L L+ NQ+  ++ SC L  GGN  G   LP  LL
Sbjct: 377 SYCRINYLGLNYNQLNGTAPSCILCLGGNRGGDIVLPNPLL 417



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>Y251_BRUSU (P67568) UPF0262 protein BR0251|
          Length = 160

 Score = 30.8 bits (68), Expect = 3.9
 Identities = 20/83 (24%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
 Frame = -2

Query: 611 FHLLGEKMGDKVMLIVAEHDDKLVAGALNLIGGDTLYGRLWGCLPDAHFPNLHFEAC--Y 438
           FH +G++ G    L ++  + +L+  ++    GD +   +    P       +F  C  Y
Sbjct: 43  FHPVGDQKGGPYRLKLSLMESRLIF-SITRENGDAVATHILSLTPLRRVVRDYFMICESY 101

Query: 437 YQAIEAAIELNLSKVEAGAQGEH 369
           YQAI +A    +  ++ G +G H
Sbjct: 102 YQAIRSATPSKIEAIDMGRRGLH 124



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>Y1669_BRUME (P67567) UPF0262 protein BMEI1669|
          Length = 160

 Score = 30.8 bits (68), Expect = 3.9
 Identities = 20/83 (24%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
 Frame = -2

Query: 611 FHLLGEKMGDKVMLIVAEHDDKLVAGALNLIGGDTLYGRLWGCLPDAHFPNLHFEAC--Y 438
           FH +G++ G    L ++  + +L+  ++    GD +   +    P       +F  C  Y
Sbjct: 43  FHPVGDQKGGPYRLKLSLMESRLIF-SITRENGDAVATHILSLTPLRRVVRDYFMICESY 101

Query: 437 YQAIEAAIELNLSKVEAGAQGEH 369
           YQAI +A    +  ++ G +G H
Sbjct: 102 YQAIRSATPSKIEAIDMGRRGLH 124



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>PAR4_HUMAN (Q96RI0) Proteinase-activated receptor 4 precursor (PAR-4)|
           (Thrombin receptor-like 3) (Coagulation factor II
           receptor-like 3)
          Length = 385

 Score = 30.4 bits (67), Expect = 5.1
 Identities = 28/100 (28%), Positives = 43/100 (43%), Gaps = 7/100 (7%)
 Frame = +2

Query: 395 PYSGLVLWLLQLPGNSKLQNANWGNVHLVGIPISDHIMY-------HLQSD*ELQRQVYH 553
           P S   L L  +P  ++L  A +G V +VG+P +   ++        L S   L      
Sbjct: 64  PDSSRALLLGWVP--TRLVPALYGLVLVVGLPANGLALWVLATQAPRLPSTMLLMNLATA 121

Query: 554 HVQQQLALPCRPSFHPKGERTPVSSRLCPSDYQLCYGRIY 673
            +   LALP R ++H +G+R P     C       YG +Y
Sbjct: 122 DLLLALALPPRIAYHLRGQRWPFGEAACRLATAALYGHMY 161



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>G3ST2_HUMAN (Q9H3Q3) Galactose-3-O-sulfotransferase 2 (EC 2.8.2.-) (Gal3ST-2)|
           (Galbeta1-3GalNAc 3'-sulfotransferase 2)
           (Beta-galactose-3-O-sulfotransferase 2) (Glycoprotein
           beta-Gal 3'-sulfotransferase 2)
          Length = 398

 Score = 30.4 bits (67), Expect = 5.1
 Identities = 16/51 (31%), Positives = 25/51 (49%)
 Frame = +2

Query: 92  GIARLPTATSVVFMVVFIAASSFHPSTFHHLAEEQILSICLPCMDLIHAGH 244
           G A  P  T+++F+     ASS   +  +  AE   LS+ LP    +H G+
Sbjct: 44  GQAEGPPVTNIMFLKTHKTASSTVLNILYRFAETHNLSVALPAGSRVHLGY 94



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>Y2025_ARCFU (O28254) Hypothetical protein AF2025|
          Length = 181

 Score = 29.6 bits (65), Expect = 8.7
 Identities = 14/41 (34%), Positives = 25/41 (60%)
 Frame = -2

Query: 647 NHWGRAYLTREFFHLLGEKMGDKVMLIVAEHDDKLVAGALN 525
           N+ G+ Y+TR+ +  L  K+G ++ L + +  D+ VA  LN
Sbjct: 102 NYGGKIYITRQSYRNLPPKVGARMNLEIVDVSDEEVAKYLN 142



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>G3ST2_PIG (Q6XQG9) Galactose 3-O-sulfotransferase 2 (EC 2.8.2.-) (Gal3ST-2)|
           (Galbeta1-3GalNAc 3'-sulfotransferase 2)
           (Beta-galactose-3-O-sulfotransferase 2)
          Length = 398

 Score = 29.6 bits (65), Expect = 8.7
 Identities = 18/54 (33%), Positives = 25/54 (46%)
 Frame = +2

Query: 83  LRHGIARLPTATSVVFMVVFIAASSFHPSTFHHLAEEQILSICLPCMDLIHAGH 244
           L  G A  P  T+V+F+     ASS   +     AE   LS+ LP    +H G+
Sbjct: 39  LLKGQAEGPPITNVMFLKTHKTASSTVLNILFRFAETHNLSVALPAGQRVHLGY 92


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 97,862,111
Number of Sequences: 219361
Number of extensions: 2055763
Number of successful extensions: 5236
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 5054
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5234
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6598423128
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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