ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd16h20
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK073492.1| Oryza sativa (japonica cultivar-group) cDNA clon... 555 e-155
2ref|XM_472625.1| Oryza sativa (japonica cultivar-group), predic... 262 1e-66
3emb|BX548156.1|OSJN00292 Oryza sativa genomic DNA, chromosome 4,... 262 1e-66
4dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 262 1e-66
5ref|NM_127903.3| Arabidopsis thaliana unknown protein AT2G23390 ... 78 4e-11
6gb|AY094462.1| Arabidopsis thaliana At2g23390/F26B6.4 mRNA, comp... 78 4e-11
7gb|BT002268.1| Arabidopsis thaliana At2g23390/F26B6.4 mRNA, comp... 78 4e-11
8gb|BT014104.1| Lycopersicon esculentum clone 133208F, mRNA sequence 56 2e-04
9emb|BX539342.9| Mouse DNA sequence from clone RP24-67F19 on chro... 44 0.59
10gb|AC122432.4| Mus musculus BAC clone RP24-187F8 from 7, complet... 44 0.59
11gb|AC003040.3| Arabidopsis thaliana chromosome 2 clone F26B6 map... 42 2.3
12gb|AC126033.4| Mus musculus BAC clone RP24-115A22 from chromosom... 42 2.3
13emb|AL133444.4|CNS01DV0 Human chromosome 14 DNA sequence BAC R-7... 42 2.3
14dbj|AP006102.1| Lotus japonicus genomic DNA, chromosome 4, clone... 42 2.3
15gb|AC024758.2| Caenorhabditis elegans cosmid Y37E11AM, complete ... 40 9.2
16gb|CP000002.2| Bacillus licheniformis ATCC 14580, complete genome 40 9.2
17gb|AE017333.1| Bacillus licheniformis DSM 13, complete genome 40 9.2
18gb|AC004520.2| Homo sapiens BAC clone CTB-119C2 from 7, complete... 40 9.2
19ref|XM_535088.2| PREDICTED: Canis familiaris tocopherol (alpha) ... 40 9.2
20gb|AC122889.3| Mus musculus BAC clone RP23-93M3 from chromosome ... 40 9.2
21gb|AC092350.4| Homo sapiens chromosome 16 clone RP11-29G3, compl... 40 9.2
22gb|AF132668.1| White spot syndrome virus thymidine kinase gene, ... 40 9.2
23gb|AC027038.12| Oryza sativa chromosome 10 BAC OSJNBa0071K18 gen... 40 9.2
24gb|AF459918.1| Bacillus licheniformis competence transcription r... 40 9.2
25gb|AC097486.2| Homo sapiens BAC clone RP11-213L8 from 4, complet... 40 9.2
26gb|AY672791.1| Manduca sexta hemolymph proteinase 16 mRNA, compl... 40 9.2
27gb|AF332093.1|AF332093 White spot syndrome virus, complete genome 40 9.2
28gb|AC099032.1| Drosophila melanogaster, chromosome 2R, region 53... 40 9.2
29gb|AC158676.12| Mus musculus 6 BAC RP23-146N13 (Roswell Park Can... 40 9.2
30dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.2
31gb|AC007520.8|AC007520 Drosophila melanogaster, chromosome 2R, r... 40 9.2
32dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.2
33gb|AF369029.2| White spot syndrome virus, complete genome 40 9.2
34gb|AC104801.4| Homo sapiens BAC clone RP11-356J12 from 2, comple... 40 9.2
35dbj|AP002903.2| Oryza sativa (japonica cultivar-group) genomic D... 40 9.2
36gb|AC126172.8| Homo sapiens 12 BAC RP11-654C3 (Roswell Park Canc... 40 9.2
37gb|AC007942.16|AC007942 Mus musculus chromosome , clone CT7-56G4... 40 9.2
38dbj|AP002524.2| Oryza sativa (japonica cultivar-group) genomic D... 40 9.2
39dbj|AK026373.1| Homo sapiens cDNA: FLJ22720 fis, clone HSI14320 40 9.2
40gb|AF440570.1| Shrimp white spot syndrome virus, complete genome 40 9.2
41gb|AE003804.4| Drosophila melanogaster chromosome 2R, section 46... 40 9.2
42dbj|AP002762.4| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 9.2
43emb|BX537494.1|HSM805860 Homo sapiens mRNA; cDNA DKFZp686G0349 (... 40 9.2
44gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 9.2
45gb|AE015925.1| Chlamydophila caviae GPIC, complete genome 40 9.2
46gb|AC122223.4| Mus musculus BAC clone RP23-130K20 from 1, comple... 40 9.2 
>dbj|AK073492.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033040F03, full
            insert sequence
          Length = 1732

 Score =  555 bits (280), Expect = e-155
 Identities = 430/480 (89%)
 Strand = Plus / Minus

                                                                        
Query: 195  aaattctttcaatatgtcttccttgtatggacctgattcatgcaggacattgatgacatg 254
            |||||| |||| ||| |||||||||||||| || || ||||||||||| || || |||||
Sbjct: 1514 aaattcgttcagtatatcttccttgtatgggccggaatcatgcaggaccttaataacatg 1455

                                                                        
Query: 255  cttaacctgagctgtctcatgtacaagaaaatttcctatagctgtcgcaaaaccaggttc 314
             ||||||||||| ||||||||||||||| ||||||||||||||| | |||||||||| ||
Sbjct: 1454 tttaacctgagccgtctcatgtacaagataatttcctatagctgccccaaaaccaggatc 1395

                                                                        
Query: 315  taagaagtagtggcagctgtaagttgtcacagggaggtaaccacgctggatcttgtgctc 374
            ||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||
Sbjct: 1394 taagaagtagtggcagctgtatgttgtcactgggaggtaaccacgctggatcttgtgctc 1335

                                                                        
Query: 375  tccctgagcacctgcttccaccttactcaggtttagttctatggctgcttcaattgcctg 434
            ||| ||||||||||| ||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 1334 tccttgagcacctgcctccaccttactcaggttcagttctatagctgcttcaattgcctg 1275

                                                                        
Query: 435  gtaatagcaagcttcaaaatgcaaattggggaaatgtgcatctggtaggcatccccataa 494
             ||||||||||||||||||||||||||||||||||  |||||||| || || ||||||||
Sbjct: 1274 ataatagcaagcttcaaaatgcaaattggggaaataagcatctggcagacagccccataa 1215

                                                                        
Query: 495  gcgaccatataatgtatcacctccaatcagattaagagctccagcgacaagtttatcatc 554
            ||| ||| | ||||| ||||||||||| || |||||||| || || ||| ||||||| ||
Sbjct: 1214 gcggccaaacaatgtgtcacctccaataaggttaagagccccggcaacatgtttatcgtc 1155

                                                                        
Query: 555  atgttcagcaacaattagcattaccttgtcgcccatcttttcacccaaaaggtgaaagaa 614
            ||||||||||||||| ||||| |||||||| ||||||||||| |||||  ||||||||||
Sbjct: 1154 atgttcagcaacaataagcatcaccttgtcacccatcttttctcccaagcggtgaaagaa 1095

                                                                        
Query: 615  ctcccgtgtcaagtaggctctgccccagtgattatcagttgtgttacggtagaatttata 674
             |||| ||||||||| | ||||||||||||||||||||||||||| |||||||| |||||
Sbjct: 1094 ttcccttgtcaagtatggtctgccccagtgattatcagttgtgttgcggtagaacttata 1035
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>ref|XM_472625.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 5022

 Score =  262 bits (132), Expect = 1e-66
 Identities = 165/176 (93%)
 Strand = Plus / Minus

                                                                        
Query: 259  acctgagctgtctcatgtacaagaaaatttcctatagctgtcgcaaaaccaggttctaag 318
            |||||||| ||||||||||||||| ||||||||||||||| | |||||||||| ||||||
Sbjct: 4637 acctgagccgtctcatgtacaagataatttcctatagctgccccaaaaccaggatctaag 4578

                                                                        
Query: 319  aagtagtggcagctgtaagttgtcacagggaggtaaccacgctggatcttgtgctctccc 378
            ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| 
Sbjct: 4577 aagtagtggcagctgtatgttgtcactgggaggtaaccacgctggatcttgtgctctcct 4518

                                                                    
Query: 379  tgagcacctgcttccaccttactcaggtttagttctatggctgcttcaattgcctg 434
            ||||||||||| ||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 4517 tgagcacctgcctccaccttactcaggttcagttctatagctgcttcaattgcctg 4462



 Score =  204 bits (103), Expect = 3e-49
 Identities = 181/207 (87%)
 Strand = Plus / Minus

                                                                        
Query: 436  taatagcaagcttcaaaatgcaaattggggaaatgtgcatctggtaggcatccccataag 495
            ||||||||||||||||||||||||||||||||||  |||||||| || || |||||||||
Sbjct: 4442 taatagcaagcttcaaaatgcaaattggggaaataagcatctggcagacagccccataag 4383

                                                                        
Query: 496  cgaccatataatgtatcacctccaatcagattaagagctccagcgacaagtttatcatca 555
            || ||| | ||||| ||||||||||| || |||||||| || || ||| ||||||| |||
Sbjct: 4382 cggccaaacaatgtgtcacctccaataaggttaagagccccggcaacatgtttatcgtca 4323

                                                                        
Query: 556  tgttcagcaacaattagcattaccttgtcgcccatcttttcacccaaaaggtgaaagaac 615
            |||||||||||||| ||||| |||||||| ||||||||||| |||||  |||||||||| 
Sbjct: 4322 tgttcagcaacaataagcatcaccttgtcacccatcttttctcccaagcggtgaaagaat 4263

                                       
Query: 616  tcccgtgtcaagtaggctctgccccag 642
            |||| ||||||||| | ||||||||||
Sbjct: 4262 tcccttgtcaagtatggtctgccccag 4236
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>emb|BX548156.1|OSJN00292 Oryza sativa genomic DNA, chromosome 4, BAC clone: P0076O17, complete
             sequence
          Length = 121130

 Score =  262 bits (132), Expect = 1e-66
 Identities = 165/176 (93%)
 Strand = Plus / Minus

                                                                         
Query: 259   acctgagctgtctcatgtacaagaaaatttcctatagctgtcgcaaaaccaggttctaag 318
             |||||||| ||||||||||||||| ||||||||||||||| | |||||||||| ||||||
Sbjct: 97375 acctgagccgtctcatgtacaagataatttcctatagctgccccaaaaccaggatctaag 97316

                                                                         
Query: 319   aagtagtggcagctgtaagttgtcacagggaggtaaccacgctggatcttgtgctctccc 378
             ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| 
Sbjct: 97315 aagtagtggcagctgtatgttgtcactgggaggtaaccacgctggatcttgtgctctcct 97256

                                                                     
Query: 379   tgagcacctgcttccaccttactcaggtttagttctatggctgcttcaattgcctg 434
             ||||||||||| ||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 97255 tgagcacctgcctccaccttactcaggttcagttctatagctgcttcaattgcctg 97200



 Score =  208 bits (105), Expect = 2e-50
 Identities = 189/217 (87%)
 Strand = Plus / Minus

                                                                         
Query: 426   aattgcctggtaatagcaagcttcaaaatgcaaattggggaaatgtgcatctggtaggca 485
             |||| |||| ||||||||||||||||||||||||||||||||||  |||||||| || ||
Sbjct: 96929 aattacctgataatagcaagcttcaaaatgcaaattggggaaataagcatctggcagaca 96870

                                                                         
Query: 486   tccccataagcgaccatataatgtatcacctccaatcagattaagagctccagcgacaag 545
              ||||||||||| ||| | ||||| ||||||||||| || |||||||| || || ||| |
Sbjct: 96869 gccccataagcggccaaacaatgtgtcacctccaataaggttaagagccccggcaacatg 96810

                                                                         
Query: 546   tttatcatcatgttcagcaacaattagcattaccttgtcgcccatcttttcacccaaaag 605
             |||||| ||||||||||||||||| ||||| |||||||| ||||||||||| |||||  |
Sbjct: 96809 tttatcgtcatgttcagcaacaataagcatcaccttgtcacccatcttttctcccaagcg 96750

                                                  
Query: 606   gtgaaagaactcccgtgtcaagtaggctctgccccag 642
             ||||||||| |||| ||||||||| | ||||||||||
Sbjct: 96749 gtgaaagaattcccttgtcaagtatggtctgccccag 96713



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 60/70 (85%)
 Strand = Plus / Minus

                                                                         
Query: 195   aaattctttcaatatgtcttccttgtatggacctgattcatgcaggacattgatgacatg 254
             |||||| |||| ||| |||||||||||||| || || ||||||||||| || || |||||
Sbjct: 97973 aaattcgttcagtatatcttccttgtatgggccggaatcatgcaggaccttaataacatg 97914

                       
Query: 255   cttaacctga 264
              |||||||||
Sbjct: 97913 tttaacctga 97904



 Score = 48.1 bits (24), Expect = 0.038
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                             
Query: 643   tgattatcagttgtgttacggtagaatttata 674
             ||||||||||||||||| |||||||| |||||
Sbjct: 96160 tgattatcagttgtgttgcggtagaacttata 96129
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  262 bits (132), Expect = 1e-66
 Identities = 165/176 (93%)
 Strand = Plus / Minus

                                                                            
Query: 259      acctgagctgtctcatgtacaagaaaatttcctatagctgtcgcaaaaccaggttctaag 318
                |||||||| ||||||||||||||| ||||||||||||||| | |||||||||| ||||||
Sbjct: 22031453 acctgagccgtctcatgtacaagataatttcctatagctgccccaaaaccaggatctaag 22031394

                                                                            
Query: 319      aagtagtggcagctgtaagttgtcacagggaggtaaccacgctggatcttgtgctctccc 378
                ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| 
Sbjct: 22031393 aagtagtggcagctgtatgttgtcactgggaggtaaccacgctggatcttgtgctctcct 22031334

                                                                        
Query: 379      tgagcacctgcttccaccttactcaggtttagttctatggctgcttcaattgcctg 434
                ||||||||||| ||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 22031333 tgagcacctgcctccaccttactcaggttcagttctatagctgcttcaattgcctg 22031278



 Score =  208 bits (105), Expect = 2e-50
 Identities = 189/217 (87%)
 Strand = Plus / Minus

                                                                            
Query: 426      aattgcctggtaatagcaagcttcaaaatgcaaattggggaaatgtgcatctggtaggca 485
                |||| |||| ||||||||||||||||||||||||||||||||||  |||||||| || ||
Sbjct: 22031007 aattacctgataatagcaagcttcaaaatgcaaattggggaaataagcatctggcagaca 22030948

                                                                            
Query: 486      tccccataagcgaccatataatgtatcacctccaatcagattaagagctccagcgacaag 545
                 ||||||||||| ||| | ||||| ||||||||||| || |||||||| || || ||| |
Sbjct: 22030947 gccccataagcggccaaacaatgtgtcacctccaataaggttaagagccccggcaacatg 22030888

                                                                            
Query: 546      tttatcatcatgttcagcaacaattagcattaccttgtcgcccatcttttcacccaaaag 605
                |||||| ||||||||||||||||| ||||| |||||||| ||||||||||| |||||  |
Sbjct: 22030887 tttatcgtcatgttcagcaacaataagcatcaccttgtcacccatcttttctcccaagcg 22030828

                                                     
Query: 606      gtgaaagaactcccgtgtcaagtaggctctgccccag 642
                ||||||||| |||| ||||||||| | ||||||||||
Sbjct: 22030827 gtgaaagaattcccttgtcaagtatggtctgccccag 22030791



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 60/70 (85%)
 Strand = Plus / Minus

                                                                            
Query: 195      aaattctttcaatatgtcttccttgtatggacctgattcatgcaggacattgatgacatg 254
                |||||| |||| ||| |||||||||||||| || || ||||||||||| || || |||||
Sbjct: 22032051 aaattcgttcagtatatcttccttgtatgggccggaatcatgcaggaccttaataacatg 22031992

                          
Query: 255      cttaacctga 264
                 |||||||||
Sbjct: 22031991 tttaacctga 22031982



 Score = 48.1 bits (24), Expect = 0.038
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                                
Query: 643      tgattatcagttgtgttacggtagaatttata 674
                ||||||||||||||||| |||||||| |||||
Sbjct: 22030238 tgattatcagttgtgttgcggtagaacttata 22030207
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>ref|NM_127903.3| Arabidopsis thaliana unknown protein AT2G23390 mRNA, complete cds
          Length = 1749

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 90/107 (84%)
 Strand = Plus / Minus

                                                                        
Query: 349  aggtaaccacgctggatcttgtgctctccctgagcacctgcttccaccttactcaggttt 408
            ||||| || ||||| ||||| ||||| ||||| || || ||||| ||| |  |||| || 
Sbjct: 1405 aggtagcctcgctgaatcttatgctcaccctgcgctccagcttctaccgttttcagatta 1346

                                                           
Query: 409  agttctatggctgcttcaattgcctggtaatagcaagcttcaaaatg 455
            || ||||| |||||||||||||||||||||||||| |||||||||||
Sbjct: 1345 agctctatcgctgcttcaattgcctggtaatagcatgcttcaaaatg 1299
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>gb|AY094462.1| Arabidopsis thaliana At2g23390/F26B6.4 mRNA, complete cds
          Length = 1640

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 90/107 (84%)
 Strand = Plus / Minus

                                                                        
Query: 349  aggtaaccacgctggatcttgtgctctccctgagcacctgcttccaccttactcaggttt 408
            ||||| || ||||| ||||| ||||| ||||| || || ||||| ||| |  |||| || 
Sbjct: 1405 aggtagcctcgctgaatcttatgctcaccctgcgctccagcttctaccgttttcagatta 1346

                                                           
Query: 409  agttctatggctgcttcaattgcctggtaatagcaagcttcaaaatg 455
            || ||||| |||||||||||||||||||||||||| |||||||||||
Sbjct: 1345 agctctatcgctgcttcaattgcctggtaatagcatgcttcaaaatg 1299
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>gb|BT002268.1| Arabidopsis thaliana At2g23390/F26B6.4 mRNA, complete cds
          Length = 1410

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 90/107 (84%)
 Strand = Plus / Minus

                                                                        
Query: 349  aggtaaccacgctggatcttgtgctctccctgagcacctgcttccaccttactcaggttt 408
            ||||| || ||||| ||||| ||||| ||||| || || ||||| ||| |  |||| || 
Sbjct: 1262 aggtagcctcgctgaatcttatgctcaccctgcgctccagcttctaccgttttcagatta 1203

                                                           
Query: 409  agttctatggctgcttcaattgcctggtaatagcaagcttcaaaatg 455
            || ||||| |||||||||||||||||||||||||| |||||||||||
Sbjct: 1202 agctctatcgctgcttcaattgcctggtaatagcatgcttcaaaatg 1156
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>gb|BT014104.1| Lycopersicon esculentum clone 133208F, mRNA sequence
          Length = 1724

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                            
Query: 430  gcctggtaatagcaagcttcaaaatgcaaatt 461
            |||||||||||||| |||||||||||||||||
Sbjct: 1269 gcctggtaatagcatgcttcaaaatgcaaatt 1238



 Score = 40.1 bits (20), Expect = 9.2
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                    
Query: 562  gcaacaattagcattaccttgtcgcccatcttttcaccca 601
            |||||||  |||| ||| ||||||||||||||| ||||||
Sbjct: 1137 gcaacaacaagcagtacattgtcgcccatctttgcaccca 1098
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>emb|BX539342.9| Mouse DNA sequence from clone RP24-67F19 on chromosome 7, complete
              sequence
          Length = 155752

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 585    gcccatcttttcacccaaaagg 606
              ||||||||||||||||||||||
Sbjct: 132575 gcccatcttttcacccaaaagg 132554
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>gb|AC122432.4| Mus musculus BAC clone RP24-187F8 from 7, complete sequence
          Length = 163515

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 585   gcccatcttttcacccaaaagg 606
             ||||||||||||||||||||||
Sbjct: 91890 gcccatcttttcacccaaaagg 91911
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>gb|AC003040.3| Arabidopsis thaliana chromosome 2 clone F26B6 map CIC06C07, complete
             sequence
          Length = 123360

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 431   cctggtaatagcaagcttcaaaatg 455
             ||||||||||||| |||||||||||
Sbjct: 12339 cctggtaatagcatgcttcaaaatg 12363



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 69/85 (81%)
 Strand = Plus / Plus

                                                                         
Query: 349   aggtaaccacgctggatcttgtgctctccctgagcacctgcttccaccttactcaggttt 408
             ||||| || ||||| ||||| ||||| ||||| || || ||||| ||| |  |||| || 
Sbjct: 12173 aggtagcctcgctgaatcttatgctcaccctgcgctccagcttctaccgttttcagatta 12232

                                      
Query: 409   agttctatggctgcttcaattgcct 433
             || ||||| ||||||||||||||||
Sbjct: 12233 agctctatcgctgcttcaattgcct 12257
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>gb|AC126033.4| Mus musculus BAC clone RP24-115A22 from chromosome 14, complete
             sequence
          Length = 154626

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 183   tggctgaggagcaaattcttt 203
             |||||||||||||||||||||
Sbjct: 52928 tggctgaggagcaaattcttt 52908
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>emb|AL133444.4|CNS01DV0 Human chromosome 14 DNA sequence BAC R-724F15 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 192387

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 371   gctctccctgagcacctgctt 391
             |||||||||||||||||||||
Sbjct: 18120 gctctccctgagcacctgctt 18140
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>dbj|AP006102.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT16B11, TM0182,
             complete sequence
          Length = 80583

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 360   ctggatcttgtgctctccctg 380
             |||||||||||||||||||||
Sbjct: 39584 ctggatcttgtgctctccctg 39604
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>gb|AC024758.2| Caenorhabditis elegans cosmid Y37E11AM, complete sequence
          Length = 20509

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 622   gtcaagtaggctctgcccca 641
             ||||||||||||||||||||
Sbjct: 14600 gtcaagtaggctctgcccca 14619
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>gb|CP000002.2| Bacillus licheniformis ATCC 14580, complete genome
          Length = 4222334

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 597     acccaaaaggtgaaagaact 616
               ||||||||||||||||||||
Sbjct: 1118805 acccaaaaggtgaaagaact 1118786
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>gb|AE017333.1| Bacillus licheniformis DSM 13, complete genome
          Length = 4222645

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 597     acccaaaaggtgaaagaact 616
               ||||||||||||||||||||
Sbjct: 1119659 acccaaaaggtgaaagaact 1119640
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>gb|AC004520.2| Homo sapiens BAC clone CTB-119C2 from 7, complete sequence
          Length = 132557

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 116    acatctgttgtatttatggttgta 139
              |||| |||||||||||||||||||
Sbjct: 130998 acatttgttgtatttatggttgta 130975
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>ref|XM_535088.2| PREDICTED: Canis familiaris tocopherol (alpha) transfer protein
           (TTPA), mRNA
          Length = 875

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 577 accttgtcgcccatcttttcacccaaaa 604
           ||||| |||| |||||||||||||||||
Sbjct: 176 accttatcgcacatcttttcacccaaaa 149
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>gb|AC122889.3| Mus musculus BAC clone RP23-93M3 from chromosome 1, complete sequence
          Length = 125681

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 167   tctacatttcaccatctggctgaggagc 194
             |||||||| ||||| |||||||||||||
Sbjct: 33071 tctacattgcaccaactggctgaggagc 33044
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>gb|AC092350.4| Homo sapiens chromosome 16 clone RP11-29G3, complete sequence
          Length = 174387

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 195    aaattctttcaatatgtctt 214
              ||||||||||||||||||||
Sbjct: 103732 aaattctttcaatatgtctt 103751
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>gb|AF132668.1| White spot syndrome virus thymidine kinase gene, complete cds; and
            unknown genes
          Length = 8715

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 414  tatggctgcttcaattgcct 433
            ||||||||||||||||||||
Sbjct: 5509 tatggctgcttcaattgcct 5528
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>gb|AC027038.12| Oryza sativa chromosome 10 BAC OSJNBa0071K18 genomic sequence, complete
              sequence
          Length = 149758

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 198    ttctttcaatatgtcttccttgta 221
              |||||||||||||| |||||||||
Sbjct: 122134 ttctttcaatatgttttccttgta 122111
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>gb|AF459918.1| Bacillus licheniformis competence transcription regulator ComK
           (comK) gene, complete cds
          Length = 1800

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 597 acccaaaaggtgaaagaact 616
           ||||||||||||||||||||
Sbjct: 284 acccaaaaggtgaaagaact 265
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>gb|AC097486.2| Homo sapiens BAC clone RP11-213L8 from 4, complete sequence
          Length = 158271

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 195   aaattctttcaatatgtcttcctt 218
             ||||||||| ||||||||||||||
Sbjct: 15529 aaattcttttaatatgtcttcctt 15552
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>gb|AY672791.1| Manduca sexta hemolymph proteinase 16 mRNA, complete cds
          Length = 1489

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 509 tatcacctccaatcagatta 528
           ||||||||||||||||||||
Sbjct: 836 tatcacctccaatcagatta 817
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>gb|AF332093.1|AF332093 White spot syndrome virus, complete genome
          Length = 305107

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 414    tatggctgcttcaattgcct 433
              ||||||||||||||||||||
Sbjct: 228914 tatggctgcttcaattgcct 228895
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>gb|AC099032.1| Drosophila melanogaster, chromosome 2R, region 53F-54A, BAC clone
              BACR32P08, complete sequence
          Length = 163072

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 438    atagcaagcttcaaaatgca 457
              ||||||||||||||||||||
Sbjct: 107239 atagcaagcttcaaaatgca 107220
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>gb|AC158676.12| Mus musculus 6 BAC RP23-146N13 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 204560

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 185    gctgaggagcaaattctttcaata 208
              |||||||||||||| |||||||||
Sbjct: 146806 gctgaggagcaaatgctttcaata 146783
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 198      ttctttcaatatgtcttccttgta 221
                |||||||||||||| |||||||||
Sbjct: 16538108 ttctttcaatatgttttccttgta 16538131
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>gb|AC007520.8|AC007520 Drosophila melanogaster, chromosome 2R, region 53D-54A, BAC clone
             BACR11M15, complete sequence
          Length = 170994

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 438   atagcaagcttcaaaatgca 457
             ||||||||||||||||||||
Sbjct: 31406 atagcaagcttcaaaatgca 31387
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 642     gtgattatcagttgtgttac 661
               ||||||||||||||||||||
Sbjct: 4060794 gtgattatcagttgtgttac 4060813
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>gb|AF369029.2| White spot syndrome virus, complete genome
          Length = 292967

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 414    tatggctgcttcaattgcct 433
              ||||||||||||||||||||
Sbjct: 277964 tatggctgcttcaattgcct 277945
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>gb|AC104801.4| Homo sapiens BAC clone RP11-356J12 from 2, complete sequence
          Length = 132644

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 279    aagaaaatttcctatagctg 298
              ||||||||||||||||||||
Sbjct: 101150 aagaaaatttcctatagctg 101131
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>dbj|AP002903.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0509B06
          Length = 104515

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 642   gtgattatcagttgtgttac 661
             ||||||||||||||||||||
Sbjct: 27537 gtgattatcagttgtgttac 27556
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>gb|AC126172.8| Homo sapiens 12 BAC RP11-654C3 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 111943

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 150    caagttccttccacccttct 169
              ||||||||||||||||||||
Sbjct: 101486 caagttccttccacccttct 101467
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>gb|AC007942.16|AC007942 Mus musculus chromosome , clone CT7-56G4, complete sequence
          Length = 122955

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 185    gctgaggagcaaattctttcaata 208
              |||||||||||||| |||||||||
Sbjct: 112111 gctgaggagcaaatgctttcaata 112088
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>dbj|AP002524.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
            clone:P0406H10
          Length = 156419

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 642  gtgattatcagttgtgttac 661
            ||||||||||||||||||||
Sbjct: 7765 gtgattatcagttgtgttac 7784
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>dbj|AK026373.1| Homo sapiens cDNA: FLJ22720 fis, clone HSI14320
          Length = 1436

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 116 acatctgttgtatttatggttgta 139
           |||| |||||||||||||||||||
Sbjct: 855 acatttgttgtatttatggttgta 878
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>gb|AF440570.1| Shrimp white spot syndrome virus, complete genome
          Length = 307287

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 414    tatggctgcttcaattgcct 433
              ||||||||||||||||||||
Sbjct: 263860 tatggctgcttcaattgcct 263841
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>gb|AE003804.4| Drosophila melanogaster chromosome 2R, section 46 of 73 of the complete
             sequence
          Length = 260337

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 438   atagcaagcttcaaaatgca 457
             ||||||||||||||||||||
Sbjct: 94531 atagcaagcttcaaaatgca 94512
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>dbj|AP002762.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-811I7, complete
              sequence
          Length = 189993

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 437    aatagcaagcttcaaaatgc 456
              ||||||||||||||||||||
Sbjct: 166636 aatagcaagcttcaaaatgc 166655
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>emb|BX537494.1|HSM805860 Homo sapiens mRNA; cDNA DKFZp686G0349 (from clone DKFZp686G0349)
          Length = 6299

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 116  acatctgttgtatttatggttgta 139
            |||| |||||||||||||||||||
Sbjct: 5717 acatttgttgtatttatggttgta 5740
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 198      ttctttcaatatgtcttccttgta 221
                |||||||||||||| |||||||||
Sbjct: 16546349 ttctttcaatatgttttccttgta 16546372
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>gb|AE015925.1| Chlamydophila caviae GPIC, complete genome
          Length = 1173390

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 120     ctgttgtatttatggttgta 139
               ||||||||||||||||||||
Sbjct: 1108606 ctgttgtatttatggttgta 1108587
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>gb|AC122223.4| Mus musculus BAC clone RP23-130K20 from 1, complete sequence
          Length = 233830

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 167    tctacatttcaccatctggctgaggagc 194
              |||||||| ||||| |||||||||||||
Sbjct: 226302 tctacattgcaccaactggctgaggagc 226275


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,060,485
Number of Sequences: 3902068
Number of extensions: 6060485
Number of successful extensions: 111847
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 111550
Number of HSP's gapped (non-prelim): 297
length of query: 675
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 652
effective length of database: 17,143,297,704
effective search space: 11177430103008
effective search space used: 11177430103008
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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