ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd16h15
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY109727.1| Zea mays CL6736_1 mRNA sequence 72 2e-09
2ref|NM_188597.1| Oryza sativa (japonica cultivar-group), predic... 44 0.46
3dbj|AK061937.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.46
4dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.46
5gb|AC079281.4|AC079281 Arabidopsis thaliana chromosome 1 BAC F2J... 44 0.46
6dbj|AP001859.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.46
7dbj|AP003434.2| Oryza sativa (japonica cultivar-group) genomic D... 44 0.46
8dbj|AK106136.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.46
9dbj|AK071900.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.46
10dbj|AK066024.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.46
11ref|XM_676362.1| Aspergillus nidulans FGSC A4 hypothetical prote... 42 1.8
12gb|AC122524.3| Mus musculus BAC clone RP24-494L9 from chromosome... 42 1.8
13emb|AL589789.7| Human DNA sequence from clone RP11-478P15 on chr... 42 1.8
14emb|AL441885.9| Human DNA sequence from clone RP11-267L15 on chr... 42 1.8
15emb|AL139004.11| Human DNA sequence from clone RP11-398O19 on ch... 42 1.8
16gb|AC131956.1| Homo sapiens BAC clone RP11-793B23 from 4, comple... 42 1.8
17emb|BX324182.13| Zebrafish DNA sequence from clone CH211-207F21 ... 42 1.8
18gb|AC084110.4|AC084110 Arabidopsis thaliana chromosome 1 BAC F27... 42 1.8
19ref|NM_001007538.1| Homo sapiens transmembrane protein 46 (TMEM4... 42 1.8
20gb|AC007767.3|F5D14 Sequence of BAC F5D14 from Arabidopsis thali... 42 1.8
21gb|AC113306.6| Mus musculus chromosome 7, clone RP23-434A16, com... 42 1.8
22gb|AC006502.2|AC006502 Homo sapiens, clone hRPK.36_A_1, complete... 42 1.8
23emb|AL732291.11| Mouse DNA sequence from clone RP23-48I14 on chr... 42 1.8
24ref|NM_121224.2| Arabidopsis thaliana unknown protein AT5G11860 ... 40 7.2
25ref|NM_180478.1| Arabidopsis thaliana unknown protein AT5G11860 ... 40 7.2
26ref|NM_203038.1| Arabidopsis thaliana unknown protein AT5G11860 ... 40 7.2
27gb|BT020406.1| Arabidopsis thaliana At5g11860 mRNA, complete cds 40 7.2
28gb|AC164646.3| Mus musculus BAC clone RP24-262I1 from chromosome... 40 7.2
29gb|AC118194.8| Mus musculus chromosome 3, clone RP23-464I9, comp... 40 7.2
30gb|AE017261.1| Picrophilus torridus DSM 9790, complete genome 40 7.2
31gb|AC102361.13| Mus musculus chromosome 18, clone RP23-37I2, com... 40 7.2
32gb|BT011819.1| Arabidopsis thaliana At5g11860 mRNA sequence 40 7.2
33ref|XM_622964.3| PREDICTED: Mus musculus retinoic acid induced 2... 40 7.2
34ref|XM_386060.1| Gibberella zeae PH-1 chromosome 3 hypothetical ... 40 7.2
35gb|AC099668.2| Homo sapiens chromosome 3 clone RP11-901L6, compl... 40 7.2
36emb|CR376728.12| Zebrafish DNA sequence from clone DKEYP-30A5 in... 40 7.2
37ref|XM_740472.1| Plasmodium chabaudi chabaudi hypothetical prote... 40 7.2
38gb|AC093447.17| Mus musculus strain 129/Sv clone ct7-25g12 map X... 40 7.2
39gb|AC146819.19| Medicago truncatula clone mth2-176k6, complete s... 40 7.2
40emb|AL356131.12| Human DNA sequence from clone RP1-91N13 on chro... 40 7.2
41emb|AL160174.12| Human DNA sequence from clone RP11-333H4 on chr... 40 7.2
42emb|AL157713.10| Human DNA sequence from clone RP11-110J1 on chr... 40 7.2
43emb|AL157897.8| Human DNA sequence from clone RP11-8D22 on chrom... 40 7.2
44emb|AL138707.10| Human DNA sequence from clone RP11-430M15 on ch... 40 7.2
45emb|AL035688.8|HS173A13 Human DNA sequence from clone RP1-173A13... 40 7.2
46emb|AL163812.1|ATF14F18 Arabidopsis thaliana DNA chromosome 5, B... 40 7.2
47gb|AC182766.4| Pan troglodytes BAC clone CH251-433B9 from chromo... 40 7.2
48gb|AC023741.4| Drosophila melanogaster X BAC RP98-23O9 (Roswell ... 40 7.2
49gb|AC104627.8| Drosophila melanogaster X BAC RP98-4A11 (Roswell ... 40 7.2
50gb|AC105314.5| Homo sapiens BAC clone RP11-312H15 from 4, comple... 40 7.2
51gb|AC093446.12| Mus musculus strain 129Sv/CJ7 clone ct7-201l18, ... 40 7.2
52gb|AC069494.8| Homo sapiens chromosome 18, clone RP11-743K16, co... 40 7.2
53gb|AC008090.3|AC008090 Drosophila melanogaster, chromosome 3R, r... 40 7.2
54gb|AC141000.7| Homo sapiens 3 BAC RP11-480C15 (Roswell Park Canc... 40 7.2
55emb|BX829896.1|CNS0A1JP Arabidopsis thaliana Full-length cDNA Co... 40 7.2
56gb|AC012070.8| Homo sapiens BAC clone RP11-318K6 from 2, complet... 40 7.2
57gb|AC009410.3| Homo sapiens BAC clone RP11-335M11 from 2, comple... 40 7.2
58gb|AC027026.11| Homo sapiens chromosome 11, clone RP11-589F4, co... 40 7.2
59gb|AC138782.4| Homo sapiens BAC clone RP11-264J9 from 4, complet... 40 7.2
60gb|BT004237.1| Arabidopsis thaliana clone RAFL14-89-L14 (R20431) 40 7.2
61gb|AY085441.1| Arabidopsis thaliana clone 151766 mRNA, complete ... 40 7.2
62gb|AE003736.3| Drosophila melanogaster chromosome 3R, section 74... 40 7.2
63gb|AE003490.3| Drosophila melanogaster chromosome X, section 42 ... 40 7.2
64emb|AL079305.3|CNS00M8M Human chromosome 14 DNA sequence BAC R-3... 40 7.2
65gb|AC006249.1|AC006249 Homo sapiens chromosome 18, clone hRPK.43... 40 7.2
66gb|BC088962.1| Xenopus laevis hypothetical LOC496360, mRNA (cDNA... 40 7.2
67emb|CR388092.29| Zebrafish DNA sequence from clone DKEY-285J13 i... 40 7.2
68gb|U53422.1|YMU53422 Yam mosaic virus BF48 P1 protein gene, part... 40 7.2
69emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB1... 40 7.2
70emb|AL732391.7| Mouse DNA sequence from clone RP23-364H13 on chr... 40 7.2
71emb|AL163194.5|CNS01RIG Human chromosome 14 DNA sequence BAC R-1... 40 7.2
72emb|AL445384.3|CNS07ED0 Human chromosome 14 DNA sequence BAC R-4... 40 7.2 
>gb|AY109727.1| Zea mays CL6736_1 mRNA sequence
          Length = 961

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 69/80 (86%)
 Strand = Plus / Minus

                                                                       
Query: 236 cttcgtcttggcgatgctgagaaggtcaccgaagagcttgtcctcgggtttcgacggcct 295
           |||||||||||| ||||| || ||||||||||| |||||||| ||||| |||| |||| |
Sbjct: 687 cttcgtcttggcaatgctcaggaggtcaccgaaaagcttgtcttcgggcttcgtcggctt 628

                               
Query: 296 catgggttgcgccatggagg 315
           ||| |||||| || ||||||
Sbjct: 627 cataggttgccccgtggagg 608
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>ref|NM_188597.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 510

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 367 tgtcttgcatggagagaccatacatactctgagagagg 404
           |||||||||||||||| ||||||||  |||| ||||||
Sbjct: 370 tgtcttgcatggagaggccatacattttctgggagagg 333



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 51/61 (83%)
 Strand = Plus / Minus

                                                                       
Query: 229 tgttctgcttcgtcttggcgatgctgagaaggtcaccgaagagcttgtcctcgggtttcg 288
           |||||||||| || ||||| ||||| ||||| || || || ||||||||||| || ||||
Sbjct: 502 tgttctgctttgttttggcaatgctaagaagatctccaaacagcttgtcctcaggcttcg 443

            
Query: 289 a 289
           |
Sbjct: 442 a 442
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>dbj|AK061937.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-D06, full
            insert sequence
          Length = 1972

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 367  tgtcttgcatggagagaccatacatactctgagagagg 404
            |||||||||||||||| ||||||||  |||| ||||||
Sbjct: 1689 tgtcttgcatggagaggccatacattttctgggagagg 1652



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 51/61 (83%)
 Strand = Plus / Minus

                                                                        
Query: 229  tgttctgcttcgtcttggcgatgctgagaaggtcaccgaagagcttgtcctcgggtttcg 288
            |||||||||| || ||||| ||||| ||||| || || || ||||||||||| || ||||
Sbjct: 1821 tgttctgctttgttttggcaatgctaagaagatctccaaacagcttgtcctcaggcttcg 1762

             
Query: 289  a 289
            |
Sbjct: 1761 a 1761
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                     
Query: 367     tgtcttgcatggagagaccatacatactctgagagagg 404
               |||||||||||||||| ||||||||  |||| ||||||
Sbjct: 7135887 tgtcttgcatggagaggccatacattttctgggagagg 7135850



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 51/61 (83%)
 Strand = Plus / Minus

                                                                           
Query: 229     tgttctgcttcgtcttggcgatgctgagaaggtcaccgaagagcttgtcctcgggtttcg 288
               |||||||||| || ||||| ||||| ||||| || || || ||||||||||| || ||||
Sbjct: 7136019 tgttctgctttgttttggcaatgctaagaagatctccaaacagcttgtcctcaggcttcg 7135960

                
Query: 289     a 289
               |
Sbjct: 7135959 a 7135959
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>gb|AC079281.4|AC079281 Arabidopsis thaliana chromosome 1 BAC F2J7 genomic sequence, complete
             sequence
          Length = 102540

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 155   aaaatttgtaagaaaaaataga 176
             ||||||||||||||||||||||
Sbjct: 63116 aaaatttgtaagaaaaaataga 63095
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>dbj|AP001859.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0485D09
          Length = 150594

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                   
Query: 367   tgtcttgcatggagagaccatacatactctgagagagg 404
             |||||||||||||||| ||||||||  |||| ||||||
Sbjct: 30535 tgtcttgcatggagaggccatacattttctgggagagg 30498



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 51/61 (83%)
 Strand = Plus / Minus

                                                                         
Query: 229   tgttctgcttcgtcttggcgatgctgagaaggtcaccgaagagcttgtcctcgggtttcg 288
             |||||||||| || ||||| ||||| ||||| || || || ||||||||||| || ||||
Sbjct: 30667 tgttctgctttgttttggcaatgctaagaagatctccaaacagcttgtcctcaggcttcg 30608

              
Query: 289   a 289
             |
Sbjct: 30607 a 30607
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>dbj|AP003434.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0452F10
          Length = 145120

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                    
Query: 367    tgtcttgcatggagagaccatacatactctgagagagg 404
              |||||||||||||||| ||||||||  |||| ||||||
Sbjct: 123467 tgtcttgcatggagaggccatacattttctgggagagg 123430



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 51/61 (83%)
 Strand = Plus / Minus

                                                                          
Query: 229    tgttctgcttcgtcttggcgatgctgagaaggtcaccgaagagcttgtcctcgggtttcg 288
              |||||||||| || ||||| ||||| ||||| || || || ||||||||||| || ||||
Sbjct: 123599 tgttctgctttgttttggcaatgctaagaagatctccaaacagcttgtcctcaggcttcg 123540

               
Query: 289    a 289
              |
Sbjct: 123539 a 123539
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>dbj|AK106136.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-G04, full
           insert sequence
          Length = 1173

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 367 tgtcttgcatggagagaccatacatactctgagagagg 404
           |||||||||||||||| ||||||||  |||| ||||||
Sbjct: 865 tgtcttgcatggagaggccatacattttctgggagagg 828



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 51/61 (83%)
 Strand = Plus / Minus

                                                                       
Query: 229 tgttctgcttcgtcttggcgatgctgagaaggtcaccgaagagcttgtcctcgggtttcg 288
           |||||||||| || ||||| ||||| ||||| || || || ||||||||||| || ||||
Sbjct: 997 tgttctgctttgttttggcaatgctaagaagatctccaaacagcttgtcctcaggcttcg 938

            
Query: 289 a 289
           |
Sbjct: 937 a 937
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>dbj|AK071900.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013057N07, full
            insert sequence
          Length = 1589

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 367  tgtcttgcatggagagaccatacatactctgagagagg 404
            |||||||||||||||| ||||||||  |||| ||||||
Sbjct: 1168 tgtcttgcatggagaggccatacattttctgggagagg 1131



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 51/61 (83%)
 Strand = Plus / Minus

                                                                        
Query: 229  tgttctgcttcgtcttggcgatgctgagaaggtcaccgaagagcttgtcctcgggtttcg 288
            |||||||||| || ||||| ||||| ||||| || || || ||||||||||| || ||||
Sbjct: 1300 tgttctgctttgttttggcaatgctaagaagatctccaaacagcttgtcctcaggcttcg 1241

             
Query: 289  a 289
            |
Sbjct: 1240 a 1240
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>dbj|AK066024.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013047G02, full
            insert sequence
          Length = 2599

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 367  tgtcttgcatggagagaccatacatactctgagagagg 404
            |||||||||||||||| ||||||||  |||| ||||||
Sbjct: 2158 tgtcttgcatggagaggccatacattttctgggagagg 2121



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 51/61 (83%)
 Strand = Plus / Minus

                                                                        
Query: 229  tgttctgcttcgtcttggcgatgctgagaaggtcaccgaagagcttgtcctcgggtttcg 288
            |||||||||| || ||||| ||||| ||||| || || || ||||||||||| || ||||
Sbjct: 2290 tgttctgctttgttttggcaatgctaagaagatctccaaacagcttgtcctcaggcttcg 2231

             
Query: 289  a 289
            |
Sbjct: 2230 a 2230
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>ref|XM_676362.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN8185.2), mRNA
          Length = 5100

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 314  ggatgaagaggatgtcgcctg 334
            |||||||||||||||||||||
Sbjct: 4711 ggatgaagaggatgtcgcctg 4691
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>gb|AC122524.3| Mus musculus BAC clone RP24-494L9 from chromosome 6, complete sequence
          Length = 201568

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 169   aaaatagacaaaatatatatt 189
             |||||||||||||||||||||
Sbjct: 94257 aaaatagacaaaatatatatt 94277
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>emb|AL589789.7| Human DNA sequence from clone RP11-478P15 on chromosome 1, complete
             sequence
          Length = 180785

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 170   aaatagacaaaatatatattg 190
             |||||||||||||||||||||
Sbjct: 67526 aaatagacaaaatatatattg 67546
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>emb|AL441885.9| Human DNA sequence from clone RP11-267L15 on chromosome 10 Contains the
             5' end of a novel gene, complete sequence
          Length = 97352

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 165   agaaaaaatagacaaaatatatatt 189
             |||||||||||| ||||||||||||
Sbjct: 34804 agaaaaaatagataaaatatatatt 34780
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>emb|AL139004.11| Human DNA sequence from clone RP11-398O19 on chromosome 13 Contains the
             3' end of the ATP8A2 gene for ATPase, aminophospholipid
             transporter-like, Class I, type 8A, member 2 (ML-1 protein
             (IB, ATP, ML-1, ATPIB, DKFZP434B1913)), a novel gene
             (LOC222477)(similar to hypothetical protein BC024118), a
             novel gene and a CpG island, complete sequence
          Length = 50685

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 168   aaaaatagacaaaatatatat 188
             |||||||||||||||||||||
Sbjct: 23408 aaaaatagacaaaatatatat 23428
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>gb|AC131956.1| Homo sapiens BAC clone RP11-793B23 from 4, complete sequence
          Length = 195404

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 163    taagaaaaaatagacaaaatatata 187
              |||||||||| ||||||||||||||
Sbjct: 187343 taagaaaaaacagacaaaatatata 187367
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>emb|BX324182.13| Zebrafish DNA sequence from clone CH211-207F21 in linkage group 19,
              complete sequence
          Length = 132675

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 168    aaaaatagacaaaatatatat 188
              |||||||||||||||||||||
Sbjct: 111722 aaaaatagacaaaatatatat 111702
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>gb|AC084110.4|AC084110 Arabidopsis thaliana chromosome 1 BAC F27G20 genomic sequence, complete
             sequence
          Length = 56310

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 154   gaaaatttgtaagaaaaaata 174
             |||||||||||||||||||||
Sbjct: 35616 gaaaatttgtaagaaaaaata 35596
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>ref|NM_001007538.1| Homo sapiens transmembrane protein 46 (TMEM46), mRNA
          Length = 2889

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 168  aaaaatagacaaaatatatat 188
            |||||||||||||||||||||
Sbjct: 1855 aaaaatagacaaaatatatat 1835
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>gb|AC007767.3|F5D14 Sequence of BAC F5D14 from Arabidopsis thaliana chromosome 1, complete
             sequence
          Length = 127462

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 154   gaaaatttgtaagaaaaaata 174
             |||||||||||||||||||||
Sbjct: 18114 gaaaatttgtaagaaaaaata 18094
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>gb|AC113306.6| Mus musculus chromosome 7, clone RP23-434A16, complete sequence
          Length = 200177

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 164   aagaaaaaatagacaaaatat 184
             |||||||||||||||||||||
Sbjct: 96796 aagaaaaaatagacaaaatat 96776
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>gb|AC006502.2|AC006502 Homo sapiens, clone hRPK.36_A_1, complete sequence
          Length = 156736

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 170   aaatagacaaaatatatattg 190
             |||||||||||||||||||||
Sbjct: 89162 aaatagacaaaatatatattg 89142
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>emb|AL732291.11| Mouse DNA sequence from clone RP23-48I14 on chromosome X, complete
              sequence
          Length = 210192

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 154    gaaaatttgtaagaaaaaata 174
              |||||||||||||||||||||
Sbjct: 164626 gaaaatttgtaagaaaaaata 164606
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>ref|NM_121224.2| Arabidopsis thaliana unknown protein AT5G11860 transcript variant
           AT5G11860.1 mRNA, complete cds
          Length = 1429

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 308 catggaggatgaagaggatg 327
           ||||||||||||||||||||
Sbjct: 488 catggaggatgaagaggatg 507
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>ref|NM_180478.1| Arabidopsis thaliana unknown protein AT5G11860 transcript variant
           AT5G11860.2 mRNA, complete cds
          Length = 1420

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 308 catggaggatgaagaggatg 327
           ||||||||||||||||||||
Sbjct: 479 catggaggatgaagaggatg 498
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>ref|NM_203038.1| Arabidopsis thaliana unknown protein AT5G11860 transcript variant
           AT5G11860.3 mRNA, complete cds
          Length = 1314

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 308 catggaggatgaagaggatg 327
           ||||||||||||||||||||
Sbjct: 373 catggaggatgaagaggatg 392
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>gb|BT020406.1| Arabidopsis thaliana At5g11860 mRNA, complete cds
          Length = 918

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 308 catggaggatgaagaggatg 327
           ||||||||||||||||||||
Sbjct: 198 catggaggatgaagaggatg 217
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>gb|AC164646.3| Mus musculus BAC clone RP24-262I1 from chromosome 3, complete sequence
          Length = 175326

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 179   aaatatatattggacctctt 198
             ||||||||||||||||||||
Sbjct: 82516 aaatatatattggacctctt 82497
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>gb|AC118194.8| Mus musculus chromosome 3, clone RP23-464I9, complete sequence
          Length = 180205

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 179    aaatatatattggacctctt 198
              ||||||||||||||||||||
Sbjct: 171739 aaatatatattggacctctt 171720
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>gb|AE017261.1| Picrophilus torridus DSM 9790, complete genome
          Length = 1545895

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                               
Query: 158     atttgtaagaaaaaatagacaaaatatatatt 189
               |||||||||||||||||||   ||||||||||
Sbjct: 1046636 atttgtaagaaaaaatagaatgaatatatatt 1046605
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>gb|AC102361.13| Mus musculus chromosome 18, clone RP23-37I2, complete sequence
          Length = 213628

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 167    aaaaaatagacaaaatatat 186
              ||||||||||||||||||||
Sbjct: 124590 aaaaaatagacaaaatatat 124571
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>gb|BT011819.1| Arabidopsis thaliana At5g11860 mRNA sequence
          Length = 918

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 308 catggaggatgaagaggatg 327
           ||||||||||||||||||||
Sbjct: 195 catggaggatgaagaggatg 214
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>ref|XM_622964.3| PREDICTED: Mus musculus retinoic acid induced 2 (Rai2), mRNA
          Length = 2331

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 379  agagaccatacatactctga 398
            ||||||||||||||||||||
Sbjct: 2149 agagaccatacatactctga 2130
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>ref|XM_386060.1| Gibberella zeae PH-1 chromosome 3 hypothetical protein (FG05884.1)
            partial mRNA
          Length = 3990

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 308  catggaggatgaagaggatg 327
            ||||||||||||||||||||
Sbjct: 1119 catggaggatgaagaggatg 1138
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>gb|AC099668.2| Homo sapiens chromosome 3 clone RP11-901L6, complete sequence
          Length = 242222

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 164    aagaaaaaatagacaaaata 183
              ||||||||||||||||||||
Sbjct: 103965 aagaaaaaatagacaaaata 103946
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>emb|CR376728.12| Zebrafish DNA sequence from clone DKEYP-30A5 in linkage group 1,
            complete sequence
          Length = 108982

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 170  aaatagacaaaatatatatt 189
            ||||||||||||||||||||
Sbjct: 3129 aaatagacaaaatatatatt 3148
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>ref|XM_740472.1| Plasmodium chabaudi chabaudi hypothetical protein (PC000808.02.0)
           partial mRNA
          Length = 960

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 169 aaaatagacaaaatatatat 188
           ||||||||||||||||||||
Sbjct: 38  aaaatagacaaaatatatat 19
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>gb|AC093447.17| Mus musculus strain 129/Sv clone ct7-25g12 map X, complete sequence
          Length = 188211

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 379  agagaccatacatactctga 398
            ||||||||||||||||||||
Sbjct: 4165 agagaccatacatactctga 4146
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>gb|AC146819.19| Medicago truncatula clone mth2-176k6, complete sequence
          Length = 127131

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 157   aatttgtaagaaaaaataga 176
             ||||||||||||||||||||
Sbjct: 67208 aatttgtaagaaaaaataga 67189
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>emb|AL356131.12| Human DNA sequence from clone RP1-91N13 on chromosome 6 Contains a
             proteasome subunit alpha type 4 (PROS29) pseudogene,
             complete sequence
          Length = 170095

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 167   aaaaaatagacaaaatatat 186
             ||||||||||||||||||||
Sbjct: 95671 aaaaaatagacaaaatatat 95690
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>emb|AL160174.12| Human DNA sequence from clone RP11-333H4 on chromosome 10, complete
              sequence
          Length = 130574

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 164    aagaaaaaatagacaaaatatata 187
              ||||||||||||| ||||||||||
Sbjct: 129129 aagaaaaaatagaaaaaatatata 129152
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>emb|AL157713.10| Human DNA sequence from clone RP11-110J1 on chromosome 1q23.3-24.3
             Contains the ETV3 gene for ets variant gene 3, a
             cytochrome c somatic pseudogene (HCP2), a ets variant gene
             3 (ETV3) pseudogene, a keratin 8 (KRT8) pseudogene, a
             smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans)
             (SMU1) pseudogene, the 5' end of the ARHGEF11 gene for Rho
             guanine nucleotide exchange factor (GEF) 11 and two CPG
             islands, complete sequence
          Length = 167292

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 167   aaaaaatagacaaaatatat 186
             ||||||||||||||||||||
Sbjct: 65017 aaaaaatagacaaaatatat 64998
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>emb|AL157897.8| Human DNA sequence from clone RP11-8D22 on chromosome 10, complete
           sequence
          Length = 173310

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 164 aagaaaaaatagacaaaatatata 187
           ||||||||||||| ||||||||||
Sbjct: 555 aagaaaaaatagaaaaaatatata 578
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>emb|AL138707.10| Human DNA sequence from clone RP11-430M15 on chromosome 13 Contains the
             3' end of a novel gene (FLJ22153) and the 3' end of the
             gene for a novel protein (ortholog of rat putative four
             repeat ion channel), complete sequence
          Length = 181311

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 166   gaaaaaatagacaaaatata 185
             ||||||||||||||||||||
Sbjct: 53634 gaaaaaatagacaaaatata 53615
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>emb|AL035688.8|HS173A13 Human DNA sequence from clone RP1-173A13 on chromosome 6 Contains a
             proteasome component C9 (macropain subunit C9) (PSMA4)
             pseudogene, complete sequence
          Length = 148870

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 167   aaaaaatagacaaaatatat 186
             ||||||||||||||||||||
Sbjct: 38720 aaaaaatagacaaaatatat 38701
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>emb|AL163812.1|ATF14F18 Arabidopsis thaliana DNA chromosome 5, BAC clone F14F18 (ESSA project)
          Length = 103638

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 308   catggaggatgaagaggatg 327
             ||||||||||||||||||||
Sbjct: 17739 catggaggatgaagaggatg 17720
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>gb|AC182766.4| Pan troglodytes BAC clone CH251-433B9 from chromosome 6, complete
              sequence
          Length = 173138

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 167    aaaaaatagacaaaatatat 186
              ||||||||||||||||||||
Sbjct: 141886 aaaaaatagacaaaatatat 141905
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>gb|AC023741.4| Drosophila melanogaster X BAC RP98-23O9 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 160440

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 167   aaaaaatagacaaaatatat 186
             ||||||||||||||||||||
Sbjct: 99699 aaaaaatagacaaaatatat 99718
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>gb|AC104627.8| Drosophila melanogaster X BAC RP98-4A11 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 187921

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 167   aaaaaatagacaaaatatat 186
             ||||||||||||||||||||
Sbjct: 34893 aaaaaatagacaaaatatat 34912
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>gb|AC105314.5| Homo sapiens BAC clone RP11-312H15 from 4, complete sequence
          Length = 193665

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 65   caatgtggggaagcagcgtcaaaa 88
            |||||||||||||||| |||||||
Sbjct: 1210 caatgtggggaagcagggtcaaaa 1187
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>gb|AC093446.12| Mus musculus strain 129Sv/CJ7 clone ct7-201l18, complete sequence
          Length = 89913

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 379   agagaccatacatactctga 398
             ||||||||||||||||||||
Sbjct: 56089 agagaccatacatactctga 56108
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>gb|AC069494.8| Homo sapiens chromosome 18, clone RP11-743K16, complete sequence
          Length = 179544

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 167    aaaaaatagacaaaatatat 186
              ||||||||||||||||||||
Sbjct: 169668 aaaaaatagacaaaatatat 169649
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>gb|AC008090.3|AC008090 Drosophila melanogaster, chromosome 3R, region 93E-93F, BAC clone
              BACR16N15, complete sequence
          Length = 172390

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 170    aaatagacaaaatatatatt 189
              ||||||||||||||||||||
Sbjct: 138873 aaatagacaaaatatatatt 138892
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>gb|AC141000.7| Homo sapiens 3 BAC RP11-480C15 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 175946

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 164   aagaaaaaatagacaaaata 183
             ||||||||||||||||||||
Sbjct: 49090 aagaaaaaatagacaaaata 49109
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>emb|BX829896.1|CNS0A1JP Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB44ZE06 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1333

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 308 catggaggatgaagaggatg 327
           ||||||||||||||||||||
Sbjct: 472 catggaggatgaagaggatg 491
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>gb|AC012070.8| Homo sapiens BAC clone RP11-318K6 from 2, complete sequence
          Length = 149776

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 153 ggaaaatttgtaagaaaaaa 172
           ||||||||||||||||||||
Sbjct: 122 ggaaaatttgtaagaaaaaa 103
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>gb|AC009410.3| Homo sapiens BAC clone RP11-335M11 from 2, complete sequence
          Length = 189812

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 153    ggaaaatttgtaagaaaaaa 172
              ||||||||||||||||||||
Sbjct: 189734 ggaaaatttgtaagaaaaaa 189715
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>gb|AC027026.11| Homo sapiens chromosome 11, clone RP11-589F4, complete sequence
          Length = 155376

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 156   aaatttgtaagaaaaaatagacaa 179
             ||||||||||||||||||| ||||
Sbjct: 38425 aaatttgtaagaaaaaataaacaa 38402
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>gb|AC138782.4| Homo sapiens BAC clone RP11-264J9 from 4, complete sequence
          Length = 64744

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 65    caatgtggggaagcagcgtcaaaa 88
             |||||||||||||||| |||||||
Sbjct: 63954 caatgtggggaagcagggtcaaaa 63931
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>gb|BT004237.1| Arabidopsis thaliana clone RAFL14-89-L14 (R20431)
          Length = 2224

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 308  catggaggatgaagaggatg 327
            ||||||||||||||||||||
Sbjct: 1267 catggaggatgaagaggatg 1286
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>gb|AY085441.1| Arabidopsis thaliana clone 151766 mRNA, complete sequence
          Length = 1315

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 308 catggaggatgaagaggatg 327
           ||||||||||||||||||||
Sbjct: 374 catggaggatgaagaggatg 393
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>gb|AE003736.3| Drosophila melanogaster chromosome 3R, section 74 of 118 of the
            complete sequence
          Length = 235928

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 170  aaatagacaaaatatatatt 189
            ||||||||||||||||||||
Sbjct: 8231 aaatagacaaaatatatatt 8250
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>gb|AE003490.3| Drosophila melanogaster chromosome X, section 42 of 74 of the complete
              sequence
          Length = 302665

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 167    aaaaaatagacaaaatatat 186
              ||||||||||||||||||||
Sbjct: 116820 aaaaaatagacaaaatatat 116839
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>emb|AL079305.3|CNS00M8M Human chromosome 14 DNA sequence BAC R-306B9 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 188736

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 164   aagaaaaaatagacaaaata 183
             ||||||||||||||||||||
Sbjct: 55263 aagaaaaaatagacaaaata 55244
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>gb|AC006249.1|AC006249 Homo sapiens chromosome 18, clone hRPK.430_E_17, complete sequence
          Length = 197082

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 167   aaaaaatagacaaaatatat 186
             ||||||||||||||||||||
Sbjct: 29572 aaaaaatagacaaaatatat 29553
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>gb|BC088962.1| Xenopus laevis hypothetical LOC496360, mRNA (cDNA clone MGC:85089
           IMAGE:6867495), complete cds
          Length = 1179

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 169 aaaatagacaaaatatatat 188
           ||||||||||||||||||||
Sbjct: 987 aaaatagacaaaatatatat 968
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>emb|CR388092.29| Zebrafish DNA sequence from clone DKEY-285J13 in linkage group 1,
              complete sequence
          Length = 161368

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 170    aaatagacaaaatatatatt 189
              ||||||||||||||||||||
Sbjct: 140444 aaatagacaaaatatatatt 140463
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>gb|U53422.1|YMU53422 Yam mosaic virus BF48 P1 protein gene, partial cds
          Length = 723

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 153 ggaaaatttgtaagaaaaaa 172
           ||||||||||||||||||||
Sbjct: 503 ggaaaatttgtaagaaaaaa 522
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>emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB122 of Yarrowia lipolytica
          Length = 3633272

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 200    cactttcactccgtcatatc 219
              ||||||||||||||||||||
Sbjct: 326198 cactttcactccgtcatatc 326217
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>emb|AL732391.7| Mouse DNA sequence from clone RP23-364H13 on chromosome X, complete
             sequence
          Length = 173841

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 379   agagaccatacatactctga 398
             ||||||||||||||||||||
Sbjct: 32124 agagaccatacatactctga 32105
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>emb|AL163194.5|CNS01RIG Human chromosome 14 DNA sequence BAC R-120I18 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 161813

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 168   aaaaatagacaaaatatata 187
             ||||||||||||||||||||
Sbjct: 21861 aaaaatagacaaaatatata 21880
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>emb|AL445384.3|CNS07ED0 Human chromosome 14 DNA sequence BAC R-460A13 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 160750

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 168   aaaaatagacaaaatatata 187
             ||||||||||||||||||||
Sbjct: 79668 aaaaatagacaaaatatata 79649


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,631,856
Number of Sequences: 3902068
Number of extensions: 4631856
Number of successful extensions: 91063
Number of sequences better than 10.0: 72
Number of HSP's better than 10.0 without gapping: 72
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 90886
Number of HSP's gapped (non-prelim): 177
length of query: 535
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 512
effective length of database: 17,143,297,704
effective search space: 8777368424448
effective search space used: 8777368424448
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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