>TPIS_COXBU (Q83BQ3) Triosephosphate isomerase (EC 5.3.1.1) (TIM)|
           (Triose-phosphate isomerase)
          Length = 255

 Score = 33.1 bits (74), Expect = 0.73
 Identities = 26/87 (29%), Positives = 40/87 (45%), Gaps = 1/87 (1%)
 Frame = +3

Query: 312 RHRHRRQGDEVALR-RPARLLGHHPLVGAPELEQARDHGVELGHRHGVLEEQVWDDEWER 488
           R RH    ++VA + R A   G  P++   E E+ R+    L     V++EQ+       
Sbjct: 100 RQRHGETNEQVAAKVRAALRCGIRPIICVGETEKQRNANQTLS----VIKEQL-----AV 150

Query: 489 LW*RQDVEQGHEGRYVAYDPVWELGFG 569
           +    D     EG  VAY+P+W +G G
Sbjct: 151 VLQMNDNLASLEGMVVAYEPIWAIGTG 177

>COBQ_SYNEL (Q8DI74) Cobyric acid synthase|
          Length = 493

 Score = 32.3 bits (72), Expect = 1.2
 Identities = 21/61 (34%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
 Frame = +3

Query: 303 LLGRHRHRRQGDEVALRRPARLLGHHPLVGAPELEQARDHGVELG-HRHGVLEEQVWDDE 479
           +LG   H+ Q +    R+     G HPL  APEL      G   G + HG+LE   W   
Sbjct: 390 ILGYEIHQGQSEYTGDRQ-----GWHPLFAAPELGLVNRAGTLWGTYLHGLLENGPWRRH 444

Query: 480 W 482
           W
Sbjct: 445 W 445

>CBX6_HUMAN (O95503) Chromobox protein homolog 6|
          Length = 412

 Score = 32.0 bits (71), Expect = 1.6
 Identities = 16/55 (29%), Positives = 24/55 (43%)
 Frame = +1

Query: 301 SSLGGTATAAREMRSPSDDRPDFLVTTHS*ALPSWNRPEIMALNLVTDMVFSKSR 465
           S   G  +   +   P D  P  L  T S + PSW  PE++ L+L  +   +  R
Sbjct: 273 SGSSGCPSPTPQSSDPDDTPPKLLPETVSPSAPSWREPEVLDLSLPPESAATSKR 327

>SUF_DROME (P25991) Protein suppressor of forked|
          Length = 733

 Score = 31.2 bits (69), Expect = 2.8
 Identities = 26/89 (29%), Positives = 38/89 (42%), Gaps = 11/89 (12%)
 Frame = -1

Query: 530 PALMSLLNILPSPKSF--PFIIPYLLFENTMSV---------TKFNAMISGLFQLGSAYE 384
           PAL +L   LP P SF  PF+   LLF+  M +            N +   +F L  +  
Sbjct: 615 PALAALCATLPPPNSFRGPFVSVELLFDIFMRLNLPDSAPQPNGDNELSPKIFDLAKSVH 674

Query: 383 WVVTKKSGRSSEGDLISLAAVAVPPKELR 297
           W+V      +S    +  +  AVPP+  R
Sbjct: 675 WIVD-----TSTYTGVQHSVTAVPPRRRR 698

>NSDHL_HUMAN (Q15738) Sterol-4-alpha-carboxylate 3-dehydrogenase,|
           decarboxylating (EC 1.1.1.170) (H105e3 protein)
          Length = 373

 Score = 31.2 bits (69), Expect = 2.8
 Identities = 16/45 (35%), Positives = 27/45 (60%)
 Frame = -1

Query: 626 LPFYSFTLFCIILPMTMFVPEAELPDWVVCYIPALMSLLNILPSP 492
           +PF++F L  I+  +    P+  +P WV  Y+  L+SLL ++ SP
Sbjct: 273 IPFWTF-LSRILTGLNYEAPKYHIPYWVAYYLALLLSLLVMVISP 316

>TPIS_SYNPX (Q7U804) Triosephosphate isomerase (EC 5.3.1.1) (TIM)|
           (Triose-phosphate isomerase)
          Length = 243

 Score = 30.0 bits (66), Expect = 6.2
 Identities = 20/46 (43%), Positives = 26/46 (56%), Gaps = 5/46 (10%)
 Frame = +3

Query: 447 GVLEEQVWDDEWERLW*RQDVEQGHEGR-----YVAYDPVWELGFG 569
           G  +EQ    E ER+  RQ +EQG EG       VAY+P+W +G G
Sbjct: 129 GESDEQRERGEAERVIRRQ-IEQGLEGLDANKLVVAYEPIWAIGTG 173

>SURE_COLP3 (Q487E6) 5'-nucleotidase surE (EC 3.1.3.5) (Nucleoside|
           5'-monophosphate phosphohydrolase)
          Length = 251

 Score = 30.0 bits (66), Expect = 6.2
 Identities = 22/82 (26%), Positives = 33/82 (40%), Gaps = 10/82 (12%)
 Frame = +3

Query: 273 GRPGLLVVPQLLGRHRHRRQGDEVALRRPARLLGHHPL-------VGAPELEQARDHGVE 431
           G P + V   L G +    Q   +   +  + L  HPL       +  P++  A   G++
Sbjct: 115 GMPAVAV--SLAGNNEQHYQTAAIVTAKIIKRLRTHPLPADQILNINVPDIPLAELKGIK 172

Query: 432 ---LGHRHGVLEEQVWDDEWER 488
              LGHRH     Q   D W+R
Sbjct: 173 VTRLGHRHQAERMQKMQDPWQR 194

>NSDHL_MOUSE (Q9R1J0) Sterol-4-alpha-carboxylate 3-dehydrogenase,|
           decarboxylating (EC 1.1.1.170)
          Length = 362

 Score = 30.0 bits (66), Expect = 6.2
 Identities = 15/45 (33%), Positives = 27/45 (60%)
 Frame = -1

Query: 626 LPFYSFTLFCIILPMTMFVPEAELPDWVVCYIPALMSLLNILPSP 492
           +PF++F L  I+  +    P+  +P W+  Y+  L+SLL ++ SP
Sbjct: 262 IPFWTF-LSRILTGLNYEAPKYHIPYWMAYYLAFLLSLLVMVVSP 305

>CADH4_CHICK (P24503) Cadherin-4 precursor (Retinal-cadherin) (R-cadherin)|
           (R-CAD)
          Length = 913

 Score = 29.6 bits (65), Expect = 8.0
 Identities = 16/43 (37%), Positives = 25/43 (58%)
 Frame = +1

Query: 307 LGGTATAAREMRSPSDDRPDFLVTTHS*ALPSWNRPEIMALNL 435
           L  TATA   +   +D+ P+F  +T+S  +P  NR E++  NL
Sbjct: 369 LSNTATAIITVTDVNDNPPEFTTSTYSGEVPE-NRVEVVVANL 410


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 65,663,218
Number of Sequences: 219361
Number of extensions: 1247425
Number of successful extensions: 4277
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 4177
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4273
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6086476506
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)