>RK34_SPIOL (P82244) 50S ribosomal protein L34, chloroplast precursor|
          Length = 152

 Score = 64.3 bits (155), Expect = 1e-10
 Identities = 35/71 (49%), Positives = 41/71 (57%)
 Frame = -1

Query: 351 LTTRRPRGLQIRAGKAALCLTKRSRSRKSLARVHGFXXXXXXXXXXXXXXXXXXXXXKIL 172
           ++T R R   +RAGKAALCLTKRSRSRKSLAR HGF                     KIL
Sbjct: 79  VSTDRCRRFVVRAGKAALCLTKRSRSRKSLARTHGFRLRMSTTSGRALLKRRRAKGRKIL 138

Query: 171 CTKSNSPTGTK 139
           CTK+N  +G +
Sbjct: 139 CTKTNPSSGKR 149

>XISA_ANASP (P08862) Excisase A (NifD element site-specific recombinase)|
          Length = 472

 Score = 28.9 bits (63), Expect = 5.2
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = -3

Query: 250 WFPKADADYCWKKGSEA*T*QRKEDPLHKVKLTHWD 143
           W  K + D  WK   E  T +R+  PLHK  +  +D
Sbjct: 300 WLSKENIDLTWKVDKECKTGERQALPLHKEWIDEFD 335

>GYRB_NEIGO (P22118) DNA gyrase subunit B (EC 5.99.1.3)|
          Length = 781

 Score = 28.9 bits (63), Expect = 5.2
 Identities = 12/28 (42%), Positives = 19/28 (67%)
 Frame = +3

Query: 90  KLTAGIHNASHCAVINTLSQWVSLTLCR 173
           K++ G+H     +V+N LS WV+LT+ R
Sbjct: 114 KISGGLHGVG-VSVVNALSDWVTLTIYR 140

>PEX2_PODAN (P51021) Peroxisomal biogenesis factor 2 (Peroxin-2) (Peroxisomal|
           protein CAR1)
          Length = 554

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 14/33 (42%), Positives = 21/33 (63%)
 Frame = +2

Query: 200 RFRTLLPAVVRIRLRKPCTRASDFLDLDLLVRQ 298
           R+RTLL  V+R+RL  P ++ S  +  + L RQ
Sbjct: 274 RYRTLLDRVLRMRLAPPTSQVSREVSFEYLNRQ 306


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,424,249
Number of Sequences: 219361
Number of extensions: 946522
Number of successful extensions: 1893
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1864
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1893
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 2286875994
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)