Clone Name | rbasd16g10 |
---|---|
Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | RK34_SPIOL (P82244) 50S ribosomal protein L34, chloroplast precu... | 64 | 3e-10 |
---|
>RK34_SPIOL (P82244) 50S ribosomal protein L34, chloroplast precursor| Length = 152 Score = 64.3 bits (155), Expect = 3e-10 Identities = 35/71 (49%), Positives = 41/71 (57%) Frame = -1 Query: 401 LTTRRPRGLQIRAGKAALCLTKRSRSRKSLARVHGFXXXXXXXXXXXXXXXXXXXXXKIL 222 ++T R R +RAGKAALCLTKRSRSRKSLAR HGF KIL Sbjct: 79 VSTDRCRRFVVRAGKAALCLTKRSRSRKSLARTHGFRLRMSTTSGRALLKRRRAKGRKIL 138 Query: 221 CTKSNSPTGTK 189 CTK+N +G + Sbjct: 139 CTKTNPSSGKR 149 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 71,567,803 Number of Sequences: 219361 Number of extensions: 1162969 Number of successful extensions: 2831 Number of sequences better than 10.0: 1 Number of HSP's better than 10.0 without gapping: 2721 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2830 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5596027262 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)