ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd16g09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1CYTB_HELAN (Q10993) Cysteine proteinase inhibitor B (Cystatin B)... 43 8e-04
2CYT1_MAIZE (P31726) Cystatin-1 precursor (Cystatin I) (Corn kern... 35 0.21
3CYTI_VIGUN (Q06445) Cysteine proteinase inhibitor (Cystatin) 34 0.36
4CYT_SOYBN (P25973) Cystatin (Low molecular mass protein inhibito... 32 1.8
5CYT1_ORYSA (P09229) Cysteine proteinase inhibitor 1 (Oryzacystat... 30 5.3
6CYTA_HELAN (Q10992) Cysteine proteinase inhibitor A (Cystatin A)... 29 9.0
7CYT2_ORYSA (P20907) Cysteine proteinase inhibitor 2 (Oryzacystat... 29 9.0

>CYTB_HELAN (Q10993) Cysteine proteinase inhibitor B (Cystatin B) (SCB)|
          Length = 101

 Score = 42.7 bits (99), Expect = 8e-04
 Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
 Frame = -2

Query: 465 RTEISDVGKNKLVQSLGRFAVAEHNR--RLGHGGSGNNGDPVQVQLAFTAVAAAQKQVIS 292
           RT++ +V  +  +Q LG ++V E+NR  R    G+G+        L F+ V AA+ QV++
Sbjct: 5   RTKVKNVKTDTEIQQLGSYSVDEYNRLQRTKKTGAGD--------LKFSQVIAAETQVVA 56

Query: 291 GVVYYLKV 268
           G  YYLK+
Sbjct: 57  GTKYYLKI 64



to top

>CYT1_MAIZE (P31726) Cystatin-1 precursor (Cystatin I) (Corn kernel cysteine|
           proteinase inhibitor)
          Length = 135

 Score = 34.7 bits (78), Expect = 0.21
 Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
 Frame = -2

Query: 456 ISDVGKNK---LVQSLGRFAVAEHNRRLGHGGSGNNGDPVQVQLAFTAVAAAQKQVISGV 286
           I DV  N+    +Q L RFAV EHN++                L F  +  A+ QV++G 
Sbjct: 44  IKDVPANENDLQLQELARFAVNEHNQK------------ANALLGFEKLVKAKTQVVAGT 91

Query: 285 VYYLKV 268
           +YYL +
Sbjct: 92  MYYLTI 97



to top

>CYTI_VIGUN (Q06445) Cysteine proteinase inhibitor (Cystatin)|
          Length = 97

 Score = 33.9 bits (76), Expect = 0.36
 Identities = 19/50 (38%), Positives = 26/50 (52%)
 Frame = -2

Query: 429 VQSLGRFAVAEHNRRLGHGGSGNNGDPVQVQLAFTAVAAAQKQVISGVVY 280
           + SL RFAV EHN++                L F  V +AQ+QV+SG +Y
Sbjct: 19  IDSLARFAVEEHNKK------------QNALLEFGRVVSAQQQVVSGTLY 56



to top

>CYT_SOYBN (P25973) Cystatin (Low molecular mass protein inhibitor of cysteine|
           proteinases) (Fragment)
          Length = 48

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 19/58 (32%), Positives = 30/58 (51%)
 Frame = -2

Query: 462 TEISDVGKNKLVQSLGRFAVAEHNRRLGHGGSGNNGDPVQVQLAFTAVAAAQKQVISG 289
           T+I+    +  +++L RFAV EHN++                L F  V +A+KQV+SG
Sbjct: 3   TDITGAQNSIDIENLARFAVDEHNKK------------ENAVLEFVRVKSAKKQVVSG 48



to top

>CYT1_ORYSA (P09229) Cysteine proteinase inhibitor 1 (Oryzacystatin-1)|
           (Oryzacystatin I)
          Length = 102

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 15/51 (29%), Positives = 25/51 (49%)
 Frame = -2

Query: 420 LGRFAVAEHNRRLGHGGSGNNGDPVQVQLAFTAVAAAQKQVISGVVYYLKV 268
           L RFAV EHN++                L F  + + ++QV++G +YY  +
Sbjct: 26  LARFAVTEHNKKANS------------LLEFEKLVSVKQQVVAGTLYYFTI 64



to top

>CYTA_HELAN (Q10992) Cysteine proteinase inhibitor A (Cystatin A) (SCA)|
          Length = 82

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 16/52 (30%), Positives = 25/52 (48%)
 Frame = -2

Query: 429 VQSLGRFAVAEHNRRLGHGGSGNNGDPVQVQLAFTAVAAAQKQVISGVVYYL 274
           +  L RFAV EHN++                L F  V   ++QV++G +YY+
Sbjct: 4   IDELARFAVDEHNKK------------QNALLEFGKVVNTKEQVVAGKMYYI 43



to top

>CYT2_ORYSA (P20907) Cysteine proteinase inhibitor 2 (Oryzacystatin-2)|
           (Oryzacystatin II)
          Length = 108

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 17/51 (33%), Positives = 23/51 (45%)
 Frame = -2

Query: 420 LGRFAVAEHNRRLGHGGSGNNGDPVQVQLAFTAVAAAQKQVISGVVYYLKV 268
           L RFAVAEHN +                L    V   ++QV+ G ++YL V
Sbjct: 32  LARFAVAEHNSK------------ANAMLELERVVKVRQQVVGGFMHYLTV 70


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 57,713,080
Number of Sequences: 219361
Number of extensions: 954015
Number of successful extensions: 2593
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2524
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2586
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5196311029
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top