Clone Name | rbasd16g07 |
---|---|
Clone Library Name | barley_pub |
>gb|M28059.1|WHTUBE2 Wheat ubiquitin carrier protein (E2) mRNA, complete cds Length = 965 Score = 555 bits (280), Expect = e-155 Identities = 414/459 (90%), Gaps = 21/459 (4%) Strand = Plus / Minus Query: 94 ctgacttgagatggctgatgactttcttcagcatctgccatgacggcatg----agtgag 149 |||| ||||||||||||||||||||||||||||||||||||| |||||| ||||| Sbjct: 765 ctgagttgagatggctgatgactttcttcagcatctgccatggcggcattcatcagtgat 706 Query: 150 cgccgcagctatgtacagac--------agagatacatcatgatcatcctgcattactga 201 |||||||||||||||||||| |||||||||||||||||| ||||||||||||| Sbjct: 705 cgccgcagctatgtacagactgacagacagagatacatcatgatca-cctgcattactga 647 Query: 202 gttactgactgagctaaccatcc--------aaccaccagtcaagggtctgcgtggccca 253 ||||||||||||||||||||||| | |||||||| |||||||||||||||||| Sbjct: 646 gttactgactgagctaaccatccttgcatccatccaccagttaagggtctgcgtggccca 587 Query: 254 tgatggcctcgtcgccggagtcgcagacctcggcgtcgctcagctcctcgtcgctctcct 313 ||||||||||||||||||||||| || |||||||||||||||||||||| || ||||||| Sbjct: 586 tgatggcctcgtcgccggagtcgtagccctcggcgtcgctcagctcctcatcactctcct 527 Query: 314 cctcttcctcctctggggatatgtcttcagccttggcatatctctcacaatattctttga 373 |||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| Sbjct: 526 cctcttcctcctctggggatatatcttcaggcttggcatatctctcacaatattctttga 467 Query: 374 ctttttgttcataggcattcttgtcgcgcatcatcagcgatgccgcctcgccattcaatg 433 |||| | ||||||||||||||||||||||||||| ||||| ||||||||||| ||||| | Sbjct: 466 ctttattttcataggcattcttgtcgcgcatcatgagcgaagccgcctcgccgttcaagg 407 Query: 434 ggtccgatgggttagggtagaggagaagctggggcaggaacacctcaaagatattcacaa 493 ||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 406 ggtccgaggggttcgggtacaggagaagctggggcaggaacacctcaaagatattcacaa 347 Query: 494 ggtcaaacattgggctccaggtctggttgatcacatcca 532 |||||||||| |||||||| ||||| ||||||||||||| Sbjct: 346 ggtcaaacatcgggctccatgtctgattgatcacatcca 308 Score = 61.9 bits (31), Expect = 2e-06 Identities = 41/43 (95%), Gaps = 1/43 (2%) Strand = Plus / Minus Query: 7 tgcaaatggnaaccaacaccaacaaatggcaagttattcacag 49 ||||||||| ||||||||| ||||||||||||||||||||||| Sbjct: 831 tgcaaatgg-aaccaacacaaacaaatggcaagttattcacag 790
>gb|AY111755.1| Zea mays CL20312_1 mRNA sequence Length = 907 Score = 63.9 bits (32), Expect = 5e-07 Identities = 56/64 (87%) Strand = Plus / Minus Query: 469 aggaacacctcaaagatattcacaaggtcaaacattgggctccaggtctggttgatcaca 528 ||||| ||||| || | ||| ||||| ||||||||||||||||| ||||||||||| ||| Sbjct: 427 aggaagacctcgaacacattgacaagatcaaacattgggctccatgtctggttgatgaca 368 Query: 529 tcca 532 |||| Sbjct: 367 tcca 364
>gb|BT016989.1| Zea mays clone EK07D2304F01.c mRNA sequence Length = 789 Score = 61.9 bits (31), Expect = 2e-06 Identities = 139/175 (79%) Strand = Plus / Minus Query: 358 tcacaatattctttgactttttgttcataggcattcttgtcgcgcatcatcagcgatgcc 417 |||||||||||||| ||||| |||||||| || | || ||||||||||| | ||| Sbjct: 487 tcacaatattctttcactttctgttcataaacaggccgatcacgcatcatcagtgctgca 428 Query: 418 gcctcgccattcaatgggtccgatgggttagggtagaggagaagctggggcaggaacacc 477 ||||| ||||| ||||| || || || || ||||| || | ||||| || ||||| || Sbjct: 427 gcctccccatttaatggatcagaaggatttgggtacagcaacagctgtggaaggaatact 368 Query: 478 tcaaagatattcacaaggtcaaacattgggctccaggtctggttgatcacatcca 532 ||||| | ||| || || ||||||||||||||||| |||||||| || ||||||| Sbjct: 367 tcaaaaacatttactagatcaaacattgggctccatgtctggtttatgacatcca 313
>ref|NM_123499.3| Arabidopsis thaliana UBC4 (UBIQUITIN CONJUGATING ENZYME 4); ubiquitin conjugating enzyme AT5G41340 (UBC4) mRNA, complete cds Length = 911 Score = 54.0 bits (27), Expect = 5e-04 Identities = 87/107 (81%) Strand = Plus / Minus Query: 424 ccattcaatgggtccgatgggttagggtagaggagaagctggggcaggaacacctcaaag 483 ||||||||||| || |||||||| || || || |||||||| || || || |||||| Sbjct: 539 ccattcaatggatctgatgggtttggatacagaagaagctgaggaagaaatgtctcaaac 480 Query: 484 atattcacaaggtcaaacattgggctccaggtctggttgatcacatc 530 | |||||||||||| ||||| || ||||| || ||||| |||||||| Sbjct: 479 acattcacaaggtcgaacataggactccaagtttggttaatcacatc 433
>ref|XM_503847.1| Yarrowia lipolytica CLIB122, YALI0E12081g predicted mRNA Length = 513 Score = 54.0 bits (27), Expect = 5e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 460 agctggggcaggaacacctcaaagatattcacaaggtcaaacattgggctccaggtctgg 519 ||||| |||||||| ||||||||||| || || | ||||||||| ||| ||| |||||| Sbjct: 290 agctgaggcaggaagacctcaaagatgttgaccatgtcaaacatgggggaccacgtctgg 231 Query: 520 ttgatcacatc 530 ||||| ||||| Sbjct: 230 ttgatgacatc 220
>gb|AY096587.1| Arabidopsis thaliana putative ubiquitin-conjugating enzyme E2-21 kD 1 (At5g41340) mRNA, complete cds Length = 595 Score = 54.0 bits (27), Expect = 5e-04 Identities = 87/107 (81%) Strand = Plus / Minus Query: 424 ccattcaatgggtccgatgggttagggtagaggagaagctggggcaggaacacctcaaag 483 ||||||||||| || |||||||| || || || |||||||| || || || |||||| Sbjct: 365 ccattcaatggatctgatgggtttggatacagaagaagctgaggaagaaatgtctcaaac 306 Query: 484 atattcacaaggtcaaacattgggctccaggtctggttgatcacatc 530 | |||||||||||| ||||| || ||||| || ||||| |||||||| Sbjct: 305 acattcacaaggtcgaacataggactccaagtttggttaatcacatc 259
>gb|AY065360.1| Arabidopsis thaliana putative E2, ubiquitin-conjugating enzyme UBC4 (At5g41340) mRNA, complete cds Length = 927 Score = 54.0 bits (27), Expect = 5e-04 Identities = 87/107 (81%) Strand = Plus / Minus Query: 424 ccattcaatgggtccgatgggttagggtagaggagaagctggggcaggaacacctcaaag 483 ||||||||||| || |||||||| || || || |||||||| || || || |||||| Sbjct: 539 ccattcaatggatctgatgggtttggatacagaagaagctgaggaagaaatgtctcaaac 480 Query: 484 atattcacaaggtcaaacattgggctccaggtctggttgatcacatc 530 | |||||||||||| ||||| || ||||| || ||||| |||||||| Sbjct: 479 acattcacaaggtcgaacataggactccaagtttggttaatcacatc 433
>emb|BX832123.1|CNS0A0V3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH53ZB04 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1728 Score = 54.0 bits (27), Expect = 5e-04 Identities = 87/107 (81%) Strand = Plus / Minus Query: 424 ccattcaatgggtccgatgggttagggtagaggagaagctggggcaggaacacctcaaag 483 ||||||||||| || |||||||| || || || |||||||| || || || |||||| Sbjct: 920 ccattcaatggatctgatgggtttggatacagaagaagctgaggaagaaatgtctcaaac 861 Query: 484 atattcacaaggtcaaacattgggctccaggtctggttgatcacatc 530 | |||||||||||| ||||| || ||||| || ||||| |||||||| Sbjct: 860 acattcacaaggtcgaacataggactccaagtttggttaatcacatc 814
>gb|AY103864.1| Zea mays PCO154745 mRNA sequence Length = 906 Score = 54.0 bits (27), Expect = 5e-04 Identities = 147/187 (78%) Strand = Plus / Minus Query: 346 ttggcatatctctcacaatattctttgactttttgttcataggcattcttgtcgcgcatc 405 |||||||| |||||||||||||||| ||||| |||||||| || || |||||| Sbjct: 636 ttggcatacttctcacaatattctttcactttctgttcataaacaggacgatcacgcatc 577 Query: 406 atcagcgatgccgcctcgccattcaatgggtccgatgggttagggtagaggagaagctgg 465 ||||| | ||| ||||| ||||| ||||| || || || || || || || | ||||| Sbjct: 576 atcagtgctgcagcctccccatttaatggatcagaaggatttggatatagtaacagctgt 517 Query: 466 ggcaggaacacctcaaagatattcacaaggtcaaacattgggctccaggtctggttgatc 525 || ||||| || ||||| | ||| || || ||||||||||||||||| |||||||| || Sbjct: 516 ggaaggaatacttcaaaaacatttactagatcaaacattgggctccatgtctggtttatg 457 Query: 526 acatcca 532 ||||||| Sbjct: 456 acatcca 450
>gb|DQ027019.1| Arabidopsis thaliana ubiquitinating enzyme (At5g41340) mRNA, complete cds Length = 564 Score = 54.0 bits (27), Expect = 5e-04 Identities = 87/107 (81%) Strand = Plus / Minus Query: 424 ccattcaatgggtccgatgggttagggtagaggagaagctggggcaggaacacctcaaag 483 ||||||||||| || |||||||| || || || |||||||| || || || |||||| Sbjct: 365 ccattcaatggatctgatgggtttggatacagaagaagctgaggaagaaatgtctcaaac 306 Query: 484 atattcacaaggtcaaacattgggctccaggtctggttgatcacatc 530 | |||||||||||| ||||| || ||||| || ||||| |||||||| Sbjct: 305 acattcacaaggtcgaacataggactccaagtttggttaatcacatc 259
>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica Length = 4224103 Score = 54.0 bits (27), Expect = 5e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 460 agctggggcaggaacacctcaaagatattcacaaggtcaaacattgggctccaggtctgg 519 ||||| |||||||| ||||||||||| || || | ||||||||| ||| ||| |||||| Sbjct: 1466375 agctgaggcaggaagacctcaaagatgttgaccatgtcaaacatgggggaccacgtctgg 1466434 Query: 520 ttgatcacatc 530 ||||| ||||| Sbjct: 1466435 ttgatgacatc 1466445
>ref|NM_105055.2| Arabidopsis thaliana ubiquitin conjugating enzyme/ ubiquitin-like activating enzyme AT1G63800 mRNA, complete cds Length = 907 Score = 50.1 bits (25), Expect = 0.007 Identities = 40/45 (88%) Strand = Plus / Minus Query: 486 attcacaaggtcaaacattgggctccaggtctggttgatcacatc 530 |||||| ||||| ||||| ||||||||||||||||| || ||||| Sbjct: 380 attcaccaggtcgaacatcgggctccaggtctggttaataacatc 336
>gb|AY114061.1| Arabidopsis thaliana putative E2, ubiquitin-conjugating enzyme UBC5 (At1g63800) mRNA, complete cds Length = 589 Score = 50.1 bits (25), Expect = 0.007 Identities = 40/45 (88%) Strand = Plus / Minus Query: 486 attcacaaggtcaaacattgggctccaggtctggttgatcacatc 530 |||||| ||||| ||||| ||||||||||||||||| || ||||| Sbjct: 303 attcaccaggtcgaacatcgggctccaggtctggttaataacatc 259
>gb|AY074347.1| Arabidopsis thaliana putative E2, ubiquitin-conjugating enzyme UBC5 (At1g63800) mRNA, complete cds Length = 915 Score = 50.1 bits (25), Expect = 0.007 Identities = 40/45 (88%) Strand = Plus / Minus Query: 486 attcacaaggtcaaacattgggctccaggtctggttgatcacatc 530 |||||| ||||| ||||| ||||||||||||||||| || ||||| Sbjct: 382 attcaccaggtcgaacatcgggctccaggtctggttaataacatc 338
>dbj|AK120481.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013112B17, full insert sequence Length = 579 Score = 50.1 bits (25), Expect = 0.007 Identities = 106/133 (79%) Strand = Plus / Minus Query: 400 cgcatcatcagcgatgccgcctcgccattcaatgggtccgatgggttagggtagaggaga 459 ||||||||||| | || ||||| ||||| |||||||| || || || ||||| | ||| Sbjct: 562 cgcatcatcagtgcagcagcctctccatttaatgggtcagaaggatttgggtacaataga 503 Query: 460 agctggggcaggaacacctcaaagatattcacaaggtcaaacattgggctccaggtctgg 519 || || || ||||| || || || | ||| || || ||||||||||||||||| |||||| Sbjct: 502 agttgtggaaggaagacttcgaacacattaactagatcaaacattgggctccacgtctgg 443 Query: 520 ttgatcacatcca 532 || || ||||||| Sbjct: 442 ttaatgacatcca 430
>dbj|AK066993.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091F02, full insert sequence Length = 3411 Score = 50.1 bits (25), Expect = 0.007 Identities = 106/133 (79%) Strand = Plus / Minus Query: 400 cgcatcatcagcgatgccgcctcgccattcaatgggtccgatgggttagggtagaggaga 459 ||||||||||| | || ||||| ||||| |||||||| || || || ||||| | ||| Sbjct: 594 cgcatcatcagtgcagcagcctctccatttaatgggtcagaaggatttgggtacaataga 535 Query: 460 agctggggcaggaacacctcaaagatattcacaaggtcaaacattgggctccaggtctgg 519 || || || ||||| || || || | ||| || || ||||||||||||||||| |||||| Sbjct: 534 agttgtggaaggaagacttcgaacacattaactagatcaaacattgggctccacgtctgg 475 Query: 520 ttgatcacatcca 532 || || ||||||| Sbjct: 474 ttaatgacatcca 462
>gb|DQ027020.1| Arabidopsis thaliana ubiquitinating enzyme (At1g63800) mRNA, complete cds Length = 558 Score = 50.1 bits (25), Expect = 0.007 Identities = 40/45 (88%) Strand = Plus / Minus Query: 486 attcacaaggtcaaacattgggctccaggtctggttgatcacatc 530 |||||| ||||| ||||| ||||||||||||||||| || ||||| Sbjct: 303 attcaccaggtcgaacatcgggctccaggtctggttaataacatc 259
>ref|NM_196743.1| Oryza sativa (japonica cultivar-group) putative acetohydroxyacid isomeroreductase (OSJNBa0094K20.18), mRNA Length = 588 Score = 48.1 bits (24), Expect = 0.030 Identities = 33/36 (91%) Strand = Plus / Minus Query: 497 caaacattgggctccaggtctggttgatcacatcca 532 |||||||||||||||| |||||||| || ||||||| Sbjct: 292 caaacattgggctccacgtctggttaatgacatcca 257 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Minus Query: 361 caatattctttgactttttgttcata 386 ||||||||||| |||||||||||||| Sbjct: 464 caatattctttcactttttgttcata 439
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 48.1 bits (24), Expect = 0.030 Identities = 33/36 (91%) Strand = Plus / Minus Query: 497 caaacattgggctccaggtctggttgatcacatcca 532 |||||||||||||||| |||||||| || ||||||| Sbjct: 15667750 caaacattgggctccacgtctggttaatgacatcca 15667715 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 306 gctctcctcctcttcctcctct 327 |||||||||||||||||||||| Sbjct: 22568114 gctctcctcctcttcctcctct 22568135 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 ctctcctcctcttcctcctc 326 |||||||||||||||||||| Sbjct: 9025574 ctctcctcctcttcctcctc 9025593
>gb|AC025907.2|AC025907 Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0094K20, complete sequence Length = 193119 Score = 48.1 bits (24), Expect = 0.030 Identities = 33/36 (91%) Strand = Plus / Minus Query: 497 caaacattgggctccaggtctggttgatcacatcca 532 |||||||||||||||| |||||||| || ||||||| Sbjct: 155116 caaacattgggctccacgtctggttaatgacatcca 155081
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 48.1 bits (24), Expect = 0.030 Identities = 33/36 (91%) Strand = Plus / Minus Query: 497 caaacattgggctccaggtctggttgatcacatcca 532 |||||||||||||||| |||||||| || ||||||| Sbjct: 15675991 caaacattgggctccacgtctggttaatgacatcca 15675956 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 306 gctctcctcctcttcctcctct 327 |||||||||||||||||||||| Sbjct: 22580582 gctctcctcctcttcctcctct 22580603 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 ctctcctcctcttcctcctc 326 |||||||||||||||||||| Sbjct: 9032003 ctctcctcctcttcctcctc 9032022
>ref|NM_130166.2| Arabidopsis thaliana UBC6 (UBIQUITIN-CONJUGATING ENZYME 6); ubiquitin conjugating enzyme AT2G46030 (UBC6) mRNA, complete cds Length = 1482 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Minus Query: 496 tcaaacattgggctccaggtctggttgatcacatc 530 ||||||||||||||||| |||||||| || ||||| Sbjct: 371 tcaaacattgggctccaagtctggtttataacatc 337 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 349 gcatatctctcacaatattctttgacttt 377 |||||| |||||||||||||||| ||||| Sbjct: 518 gcatatttctcacaatattctttcacttt 490
>ref|NM_020814.1| Homo sapiens membrane-associated ring finger (C3HC4) 4 (MARCH4), mRNA Length = 4450 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 308 tctcctcctcttcctcctctggg 330 ||||||||||||||||||||||| Sbjct: 621 tctcctcctcttcctcctctggg 599
>gb|AC132142.3| Mus musculus BAC clone RP23-75I5 from chromosome 7, complete sequence Length = 221548 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 296 gctcctcgtcgctctcctcctcttcctcctc 326 ||||||| || |||||||||||||||||||| Sbjct: 170968 gctcctcttccctctcctcctcttcctcctc 170938
>gb|AC138270.12| Mus musculus chromosome 7, clone RP23-323F17, complete sequence Length = 213855 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 296 gctcctcgtcgctctcctcctcttcctcctc 326 ||||||| || |||||||||||||||||||| Sbjct: 202914 gctcctcttccctctcctcctcttcctcctc 202944
>emb|AL035695.17|HS404G5 Human DNA sequence from clone RP3-404G5 on chromosome 6q24.1-25.2 Contains the 5' end of the ESR1 gene for estrogen receptor 1, complete sequence Length = 119737 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 209 actgagctaaccatccaaccacc 231 ||||||||||||||||||||||| Sbjct: 83021 actgagctaaccatccaaccacc 83043
>ref|XM_694544.1| PREDICTED: Danio rerio similar to Splicing factor 3B subunit 2 (Spliceosome associated protein 145) (SAP 145) (SF3b150) (Pre-mRNA splicing factor SF3b 145 kDa subunit) (LOC570994), partial mRNA Length = 858 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 297 ctcctcgtcgctctcctcctcttcctc 323 ||||||||||||||||||||| ||||| Sbjct: 423 ctcctcgtcgctctcctcctcctcctc 397
>emb|BX819316.1|CNS0A9TY Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB67ZG03 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 661 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Minus Query: 496 tcaaacattgggctccaggtctggttgatcacatc 530 ||||||||||||||||| |||||||| || ||||| Sbjct: 191 tcaaacattgggctccaagtctggtttataacatc 157 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 349 gcatatctctcacaatattctttgacttt 377 |||||| |||||||||||||||| ||||| Sbjct: 338 gcatatttctcacaatattctttcacttt 310
>emb|BX821930.1|CNS0A94H Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL85ZE12 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 745 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Minus Query: 496 tcaaacattgggctccaggtctggttgatcacatc 530 ||||||||||||||||| |||||||| || ||||| Sbjct: 344 tcaaacattgggctccaagtctggtttataacatc 310 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 349 gcatatctctcacaatattctttgacttt 377 |||||| |||||||||||||||| ||||| Sbjct: 491 gcatatttctcacaatattctttcacttt 463
>emb|BX832125.1|CNS0A0VV Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH53ZC03 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1722 Score = 46.1 bits (23), Expect = 0.12 Identities = 86/107 (80%) Strand = Plus / Minus Query: 424 ccattcaatgggtccgatgggttagggtagaggagaagctggggcaggaacacctcaaag 483 ||||||||||| || |||||||| || || || |||||||| || || || |||||| Sbjct: 919 ccattcaatggatctgatgggtttggatacagaagaagctgaggaagaaatgtctcaaac 860 Query: 484 atattcacaaggtcaaacattgggctccaggtctggttgatcacatc 530 | |||||||||||| ||||| || ||||| || ||||| || ||||| Sbjct: 859 acattcacaaggtcgaacataggactccaagtttggttaattacatc 813
>gb|BT005208.1| Arabidopsis thaliana At2g46030 mRNA, complete cds Length = 552 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Minus Query: 496 tcaaacattgggctccaggtctggttgatcacatc 530 ||||||||||||||||| |||||||| || ||||| Sbjct: 293 tcaaacattgggctccaagtctggtttataacatc 259 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 349 gcatatctctcacaatattctttgacttt 377 |||||| |||||||||||||||| ||||| Sbjct: 440 gcatatttctcacaatattctttcacttt 412
>gb|AC098820.3| Homo sapiens BAC clone RP11-253L15 from 2, complete sequence Length = 155669 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 308 tctcctcctcttcctcctctggg 330 ||||||||||||||||||||||| Sbjct: 36029 tctcctcctcttcctcctctggg 36051
>gb|AF180143.1|AF180143 Glycine max ubiquitin carrier protein 4 (UBC4) mRNA, complete cds Length = 757 Score = 46.1 bits (23), Expect = 0.12 Identities = 50/59 (84%) Strand = Plus / Minus Query: 472 aacacctcaaagatattcacaaggtcaaacattgggctccaggtctggttgatcacatc 530 ||||||||||| | ||| ||||| |||||||| || |||||||| || ||||| ||||| Sbjct: 333 aacacctcaaacacattgacaagatcaaacatgggactccaggtttgattgataacatc 275
>dbj|AB090237.1| Homo sapiens gene for estrogen receptor alpha, exon 1a, 1b, 2 Length = 56124 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 209 actgagctaaccatccaaccacc 231 ||||||||||||||||||||||| Sbjct: 26583 actgagctaaccatccaaccacc 26561
>gb|DQ027021.1| Arabidopsis thaliana ubiquitinating enzyme (At2g46030) mRNA, complete cds Length = 552 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Minus Query: 496 tcaaacattgggctccaggtctggttgatcacatc 530 ||||||||||||||||| |||||||| || ||||| Sbjct: 293 tcaaacattgggctccaagtctggtttataacatc 259 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 349 gcatatctctcacaatattctttgacttt 377 |||||| |||||||||||||||| ||||| Sbjct: 440 gcatatttctcacaatattctttcacttt 412
>dbj|AB037820.1| Homo sapiens mRNA for KIAA1399 protein, partial cds Length = 4450 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 308 tctcctcctcttcctcctctggg 330 ||||||||||||||||||||||| Sbjct: 621 tctcctcctcttcctcctctggg 599
>ref|NM_197907.1| Oryza sativa (japonica cultivar-group) unknown protein (OSJNBa0056G17.14), mRNA Length = 2585 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 306 gctctcctcctcttcctcctct 327 |||||||||||||||||||||| Sbjct: 2259 gctctcctcctcttcctcctct 2238
>gb|AC099726.6| Mus musculus chromosome 7, clone RP23-342H24, complete sequence Length = 217218 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Plus Query: 365 attctttgactttttgttcataggca 390 |||||| ||||||||||||||||||| Sbjct: 117873 attcttggactttttgttcataggca 117898
>ref|XM_323564.1| Neurospora crassa OR74A predicted protein (NCU04225.1) partial mRNA Length = 678 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 305 cgctctcctcctcttcctcctc 326 |||||||||||||||||||||| Sbjct: 56 cgctctcctcctcttcctcctc 77
>ref|XM_955756.1| Neurospora crassa OR74A hypothetical protein (NCU04225.1) partial mRNA Length = 678 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 305 cgctctcctcctcttcctcctc 326 |||||||||||||||||||||| Sbjct: 56 cgctctcctcctcttcctcctc 77
>gb|AC122895.5| Mus musculus BAC clone RP23-69K14 from chromosome 18, complete sequence Length = 215539 Score = 44.1 bits (22), Expect = 0.46 Identities = 28/30 (93%) Strand = Plus / Minus Query: 297 ctcctcgtcgctctcctcctcttcctcctc 326 |||||| || |||||||||||||||||||| Sbjct: 113688 ctcctcctctctctcctcctcttcctcctc 113659 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 ctctcctcctcttcctcctc 326 |||||||||||||||||||| Sbjct: 136581 ctctcctcctcttcctcctc 136600
>gb|AC109271.10| Mus musculus chromosome 1, clone RP23-353I19, complete sequence Length = 221001 Score = 44.1 bits (22), Expect = 0.46 Identities = 28/30 (93%) Strand = Plus / Plus Query: 297 ctcctcgtcgctctcctcctcttcctcctc 326 |||||| || |||||||||||||||||||| Sbjct: 139633 ctcctcctctctctcctcctcttcctcctc 139662
>ref|XM_978069.1| PREDICTED: Mus musculus similar to myeloid/lymphoid or mixed lineage-leukemia translocation to 6 homolog (LOC669933), mRNA Length = 7501 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 310 tcctcctcttcctcctctgggg 331 |||||||||||||||||||||| Sbjct: 1345 tcctcctcttcctcctctgggg 1366
>ref|XM_915937.2| PREDICTED: Mus musculus similar to myeloid/lymphoid or mixed lineage-leukemia translocation to 6 homolog (LOC639490), mRNA Length = 7383 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 310 tcctcctcttcctcctctgggg 331 |||||||||||||||||||||| Sbjct: 1219 tcctcctcttcctcctctgggg 1240
>gb|AC127696.4| Mus musculus BAC clone RP23-459J11 from chromosome 7, complete sequence Length = 168580 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Plus Query: 365 attctttgactttttgttcataggca 390 |||||| ||||||||||||||||||| Sbjct: 35687 attcttggactttttgttcataggca 35712
>gb|AC091754.4| Papio anubis clone RP41-384C24, complete sequence Length = 192273 Score = 44.1 bits (22), Expect = 0.46 Identities = 28/30 (93%) Strand = Plus / Minus Query: 297 ctcctcgtcgctctcctcctcttcctcctc 326 |||||| |||||||||||||| |||||||| Sbjct: 83514 ctcctcctcgctctcctcctcctcctcctc 83485
>gb|AC102317.7| Mus musculus chromosome 18, clone RP24-444M6, complete sequence Length = 194567 Score = 44.1 bits (22), Expect = 0.46 Identities = 28/30 (93%) Strand = Plus / Minus Query: 297 ctcctcgtcgctctcctcctcttcctcctc 326 |||||| || |||||||||||||||||||| Sbjct: 161687 ctcctcctctctctcctcctcttcctcctc 161658
>emb|X71381.1|ATUBC6 A.thaliana gene for ubiquitin carrier protein Length = 1548 Score = 44.1 bits (22), Expect = 0.46 Identities = 31/34 (91%) Strand = Plus / Minus Query: 497 caaacattgggctccaggtctggttgatcacatc 530 |||||||||||||||| |||||||| || ||||| Sbjct: 1044 caaacattgggctccaagtctggtttataacatc 1011
>emb|AL807369.1|NCG15D1 Neurospora crassa DNA linkage group V cosmid contig G15D1 Length = 62178 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 305 cgctctcctcctcttcctcctc 326 |||||||||||||||||||||| Sbjct: 35051 cgctctcctcctcttcctcctc 35030
>emb|AL807368.1|NC62D11 Neurospora crassa DNA linkage group V cosmid contig 62D11 Length = 102165 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 305 cgctctcctcctcttcctcctc 326 |||||||||||||||||||||| Sbjct: 99732 cgctctcctcctcttcctcctc 99711
>gb|AC083984.7| Homo sapiens chromosome 11, clone RP11-401C19, complete sequence Length = 117149 Score = 44.1 bits (22), Expect = 0.46 Identities = 28/30 (93%) Strand = Plus / Minus Query: 297 ctcctcgtcgctctcctcctcttcctcctc 326 |||||| || |||||||||||||||||||| Sbjct: 23658 ctcctcctctctctcctcctcttcctcctc 23629
>gb|AC126615.7| Homo sapiens 12 BAC RP11-129B9 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 67557 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 193 cattactgagttactgactgag 214 |||||||||||||||||||||| Sbjct: 62081 cattactgagttactgactgag 62102
>gb|AC005397.3| Arabidopsis thaliana chromosome 2 clone T3F17 map CIC02E07, complete sequence Length = 110149 Score = 44.1 bits (22), Expect = 0.46 Identities = 31/34 (91%) Strand = Plus / Minus Query: 497 caaacattgggctccaggtctggttgatcacatc 530 |||||||||||||||| |||||||| || ||||| Sbjct: 90910 caaacattgggctccaagtctggtttataacatc 90877
>gb|AC018727.10| Oryza sativa chromosome 10 BAC OSJNBa0056G17 genomic sequence, complete sequence Length = 139999 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 306 gctctcctcctcttcctcctct 327 |||||||||||||||||||||| Sbjct: 22783 gctctcctcctcttcctcctct 22804
>gb|AC153820.4| Mus musculus 6 BAC RP23-459L15 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 180996 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 306 gctctcctcctcttcctcctct 327 |||||||||||||||||||||| Sbjct: 118236 gctctcctcctcttcctcctct 118257
>dbj|AB097543.1| Macaca fascicularis brain cDNA clone:QflA-17590, similar to human hypothetical protein FLJ37538, mRNA, ]NM_173564 Length = 2785 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 308 tctcctcctcttcctcctctgg 329 |||||||||||||||||||||| Sbjct: 1694 tctcctcctcttcctcctctgg 1673
>ref|XM_344594.2| PREDICTED: Rattus norvegicus SRY-box containing gene 4 (predicted) (Sox4_predicted), mRNA Length = 2903 Score = 44.1 bits (22), Expect = 0.46 Identities = 28/30 (93%) Strand = Plus / Plus Query: 298 tcctcgtcgctctcctcctcttcctcctct 327 ||||||||||||||||| || ||||||||| Sbjct: 1692 tcctcgtcgctctcctcatcctcctcctct 1721
>dbj|AK102587.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033098F01, full insert sequence Length = 2714 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 306 gctctcctcctcttcctcctct 327 |||||||||||||||||||||| Sbjct: 2388 gctctcctcctcttcctcctct 2367
>gb|AC117796.12| Mus musculus chromosome 1, clone RP24-554P6, complete sequence Length = 109851 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 309 ctcctcctcttcctcctctggg 330 |||||||||||||||||||||| Sbjct: 85674 ctcctcctcttcctcctctggg 85695 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 309 ctcctcctcttcctcctctggg 330 |||||||||||||||||||||| Sbjct: 78072 ctcctcctcttcctcctctggg 78093 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 309 ctcctcctcttcctcctctggg 330 |||||||||||||||||||||| Sbjct: 70429 ctcctcctcttcctcctctggg 70450
>gb|AE015924.1| Porphyromonas gingivalis W83, complete genome Length = 2343476 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 362 aatattctttgactttttgttc 383 |||||||||||||||||||||| Sbjct: 1046444 aatattctttgactttttgttc 1046423
>emb|BX284643.8| Mouse DNA sequence from clone RP23-366J22 on chromosome 11, complete sequence Length = 51811 Score = 44.1 bits (22), Expect = 0.46 Identities = 28/30 (93%) Strand = Plus / Minus Query: 297 ctcctcgtcgctctcctcctcttcctcctc 326 |||||| ||| ||||||||||||||||||| Sbjct: 28022 ctcctcctcgttctcctcctcttcctcctc 27993
>gb|AC024913.33| Mus musculus BAC Clone 402k12 RPCI-23, complete sequence Length = 197831 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 306 gctctcctcctcttcctcctct 327 |||||||||||||||||||||| Sbjct: 24291 gctctcctcctcttcctcctct 24270
>emb|AL732329.7| Mouse DNA sequence from clone RP23-118K22 on chromosome 2, complete sequence Length = 209002 Score = 44.1 bits (22), Expect = 0.46 Identities = 28/30 (93%) Strand = Plus / Minus Query: 296 gctcctcgtcgctctcctcctcttcctcct 325 |||||||||| |||||||||||||||||| Sbjct: 55680 gctcctcgtctttctcctcctcttcctcct 55651
>emb|AL596123.32| Mouse DNA sequence from clone RP23-94N18 on chromosome 11, complete sequence Length = 165196 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 310 tcctcctcttcctcctctgggg 331 |||||||||||||||||||||| Sbjct: 114355 tcctcctcttcctcctctgggg 114376
>gb|L19355.1|ATHUBIQUE Arabidopsis thaliana ubiquitin conjugating enzyme (UBC6) gene, complete cds Length = 1987 Score = 44.1 bits (22), Expect = 0.46 Identities = 31/34 (91%) Strand = Plus / Minus Query: 497 caaacattgggctccaggtctggttgatcacatc 530 |||||||||||||||| |||||||| || ||||| Sbjct: 1483 caaacattgggctccaagtctggtttataacatc 1450
>gb|AC167537.7| Mus musculus chromosome 8, clone RP23-99B10, complete sequence Length = 201791 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 307 ctctcctcctcttcctcctct 327 ||||||||||||||||||||| Sbjct: 122309 ctctcctcctcttcctcctct 122329 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 308 tctcctcctcttcctcctct 327 |||||||||||||||||||| Sbjct: 122713 tctcctcctcttcctcctct 122732 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 ctctcctcctcttcctcctc 326 |||||||||||||||||||| Sbjct: 122667 ctctcctcctcttcctcctc 122686 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 308 tctcctcctcttcctcctct 327 |||||||||||||||||||| Sbjct: 122587 tctcctcctcttcctcctct 122606 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 308 tctcctcctcttcctcctct 327 |||||||||||||||||||| Sbjct: 122439 tctcctcctcttcctcctct 122458
>gb|AC167012.3| Mus musculus BAC clone RP23-416A5 from chromosome 13, complete sequence Length = 193916 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 307 ctctcctcctcttcctcctct 327 ||||||||||||||||||||| Sbjct: 124144 ctctcctcctcttcctcctct 124124
>gb|AC118193.9| Mus musculus chromosome 8, clone RP23-241A10, complete sequence Length = 222682 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 298 tcctcgtcgctctcctcctcttcct 322 |||||||| |||||||||||||||| Sbjct: 218314 tcctcgtctctctcctcctcttcct 218338
>ref|XM_510916.1| PREDICTED: Pan troglodytes similar to thousand and one amino acid protein kinase; prostate derived STE20-like kinase PSK (LOC454032), mRNA Length = 643 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 311 cctcctcttcctcctctgggg 331 ||||||||||||||||||||| Sbjct: 212 cctcctcttcctcctctgggg 192
>gb|AC161218.10| Mus musculus chromosome 7, clone RP24-161J8, complete sequence Length = 181156 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 308 tctcctcctcttcctcctctg 328 ||||||||||||||||||||| Sbjct: 22249 tctcctcctcttcctcctctg 22229
>ref|XM_524994.1| PREDICTED: Pan troglodytes LOC469611 (LOC469611), mRNA Length = 3138 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 310 tcctcctcttcctcctctggg 330 ||||||||||||||||||||| Sbjct: 1072 tcctcctcttcctcctctggg 1092
>ref|NM_016151.2| Homo sapiens TAO kinase 2 (TAOK2), transcript variant 2, mRNA Length = 4920 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 311 cctcctcttcctcctctgggg 331 ||||||||||||||||||||| Sbjct: 1786 cctcctcttcctcctctgggg 1766
>ref|NM_004783.2| Homo sapiens TAO kinase 2 (TAOK2), transcript variant 1, mRNA Length = 4625 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 311 cctcctcttcctcctctgggg 331 ||||||||||||||||||||| Sbjct: 1786 cctcctcttcctcctctgggg 1766
>gb|BC054495.1| Homo sapiens TAO kinase 2, mRNA (cDNA clone IMAGE:6204914) Length = 3091 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 311 cctcctcttcctcctctgggg 331 ||||||||||||||||||||| Sbjct: 1773 cctcctcttcctcctctgggg 1753
>gb|BC031825.2| Homo sapiens TAO kinase 2, mRNA (cDNA clone IMAGE:4944200), partial cds Length = 1755 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 311 cctcctcttcctcctctgggg 331 ||||||||||||||||||||| Sbjct: 1078 cctcctcttcctcctctgggg 1058
>gb|BC015204.1| Homo sapiens TAO kinase 2, mRNA (cDNA clone IMAGE:3878048), containing frame-shift errors Length = 3069 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 311 cctcctcttcctcctctgggg 331 ||||||||||||||||||||| Sbjct: 1786 cctcctcttcctcctctgggg 1766
>gb|AC135497.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0008E02, complete sequence Length = 152974 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 307 ctctcctcctcttcctcctct 327 ||||||||||||||||||||| Sbjct: 6639 ctctcctcctcttcctcctct 6659
>gb|AC135499.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0031M14, complete sequence Length = 49269 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 307 ctctcctcctcttcctcctct 327 ||||||||||||||||||||| Sbjct: 2388 ctctcctcctcttcctcctct 2368
>gb|AC134443.3| Mus musculus BAC clone RP24-107B13 from chromosome 8, complete sequence Length = 182604 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 307 ctctcctcctcttcctcctct 327 ||||||||||||||||||||| Sbjct: 146040 ctctcctcctcttcctcctct 146020 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 308 tctcctcctcttcctcctct 327 |||||||||||||||||||| Sbjct: 145910 tctcctcctcttcctcctct 145891 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 308 tctcctcctcttcctcctct 327 |||||||||||||||||||| Sbjct: 145762 tctcctcctcttcctcctct 145743 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 307 ctctcctcctcttcctcctc 326 |||||||||||||||||||| Sbjct: 145682 ctctcctcctcttcctcctc 145663 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 308 tctcctcctcttcctcctct 327 |||||||||||||||||||| Sbjct: 145636 tctcctcctcttcctcctct 145617
>gb|AC124110.8| Mus musculus chromosome 1, clone RP24-343C13, complete sequence Length = 149487 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 307 ctctcctcctcttcctcctct 327 ||||||||||||||||||||| Sbjct: 60490 ctctcctcctcttcctcctct 60510
>gb|AC119951.12| Mus musculus chromosome 9, clone RP24-448C4, complete sequence Length = 215131 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 307 ctctcctcctcttcctcctct 327 ||||||||||||||||||||| Sbjct: 71843 ctctcctcctcttcctcctct 71823 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 308 tctcctcctcttcctcctct 327 |||||||||||||||||||| Sbjct: 70892 tctcctcctcttcctcctct 70873
>ref|XM_414995.1| PREDICTED: Gallus gallus similar to hypothetical protein FLJ32786 (LOC416699), mRNA Length = 2370 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Minus Query: 295 agctcctcgtcgctctcctcctcttcctcctct 327 ||||| |||||| ||||||||||||| |||||| Sbjct: 149 agctcatcgtcgttctcctcctcttcatcctct 117
>ref|XM_422760.1| PREDICTED: Gallus gallus similar to eukaryotic translation intiation factor 4GI (LOC424953), mRNA Length = 4737 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 304 tcgctctcctcctcttcctcctctg 328 |||||||| |||||||||||||||| Sbjct: 1325 tcgctctcttcctcttcctcctctg 1301
>gb|AC137969.9| Mus musculus chromosome 7, clone RP23-267N11, complete sequence Length = 176711 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 308 tctcctcctcttcctcctctg 328 ||||||||||||||||||||| Sbjct: 1707 tctcctcctcttcctcctctg 1727
>gb|BC056319.1| Danio rerio zgc:65873, mRNA (cDNA clone MGC:65873 IMAGE:6800422), complete cds Length = 1516 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 309 ctcctcctcttcctcctctgg 329 ||||||||||||||||||||| Sbjct: 560 ctcctcctcttcctcctctgg 540
>ref|XM_951890.1| Neurospora crassa OR74A hypothetical protein (NCU01534.1) partial mRNA Length = 1293 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 298 tcctcgtcgctctcctcctcttcctcctc 326 ||||||||| |||||||||||||||||| Sbjct: 350 tcctcgtcgtcctcctcctcttcctcctc 322
>ref|XM_957859.1| Neurospora crassa OR74A hypothetical protein (NCU07831.1) partial mRNA Length = 2619 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 297 ctcctcgtcgctctcctcctc 317 ||||||||||||||||||||| Sbjct: 156 ctcctcgtcgctctcctcctc 136
>ref|XM_958640.1| Neurospora crassa OR74A hypothetical protein (NCU03241.1) partial mRNA Length = 1404 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 297 ctcctcgtcgctctcctcctc 317 ||||||||||||||||||||| Sbjct: 465 ctcctcgtcgctctcctcctc 445
>ref|XM_327972.1| Neurospora crassa OR74A hypothetical protein (NCU01534.1) partial mRNA Length = 1293 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 298 tcctcgtcgctctcctcctcttcctcctc 326 ||||||||| |||||||||||||||||| Sbjct: 350 tcctcgtcgtcctcctcctcttcctcctc 322
>ref|XM_328536.1| Neurospora crassa OR74A hypothetical protein (NCU07831.1) partial mRNA Length = 2619 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 297 ctcctcgtcgctctcctcctc 317 ||||||||||||||||||||| Sbjct: 156 ctcctcgtcgctctcctcctc 136
>ref|XM_330676.1| Neurospora crassa OR74A hypothetical protein (NCU03241.1) partial mRNA Length = 1404 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 297 ctcctcgtcgctctcctcctc 317 ||||||||||||||||||||| Sbjct: 465 ctcctcgtcgctctcctcctc 445
>ref|NM_203484.1| Danio rerio calcium channel, voltage-dependent, L type, alpha 1D subunit (cacna1d), mRNA Length = 6526 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 306 gctctcctcctcttcctcctc 326 ||||||||||||||||||||| Sbjct: 1479 gctctcctcctcttcctcctc 1459
>gb|AC165233.6| Mus musculus chromosome 8, clone RP23-307O2, complete sequence Length = 158925 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 298 tcctcgtcgctctcctcctcttcct 322 |||||||| |||||||||||||||| Sbjct: 15018 tcctcgtctctctcctcctcttcct 15042
>gb|AC134530.3| Mus musculus BAC clone RP24-507K16 from chromosome 5, complete sequence Length = 215112 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 307 ctctcctcctcttcctcctct 327 ||||||||||||||||||||| Sbjct: 202392 ctctcctcctcttcctcctct 202412
>gb|AY528224.1| Danio rerio L-type calcium channel pore subunit isoform 1.3a (cav1.3a) mRNA, complete cds Length = 6526 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 306 gctctcctcctcttcctcctc 326 ||||||||||||||||||||| Sbjct: 1479 gctctcctcctcttcctcctc 1459
>gb|AC141647.3| Mus musculus BAC clone RP23-64E12 from chromosome 10, complete sequence Length = 217745 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 307 ctctcctcctcttcctcctct 327 ||||||||||||||||||||| Sbjct: 50918 ctctcctcctcttcctcctct 50938
>gb|AC127224.3| Mus musculus BAC clone RP24-498F21 from chromosome 10, complete sequence Length = 162143 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 307 ctctcctcctcttcctcctct 327 ||||||||||||||||||||| Sbjct: 143586 ctctcctcctcttcctcctct 143606
>gb|AC161180.3| Mus musculus chromosome 1, clone RP23-149C6, complete sequence Length = 215599 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 307 ctctcctcctcttcctcctct 327 ||||||||||||||||||||| Sbjct: 31970 ctctcctcctcttcctcctct 31990 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 309 ctcctcctcttcctcctctg 328 |||||||||||||||||||| Sbjct: 152019 ctcctcctcttcctcctctg 152000
>gb|AC126421.12| Mus musculus chromosome 1, clone RP23-167H24, complete sequence Length = 218458 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 307 ctctcctcctcttcctcctct 327 ||||||||||||||||||||| Sbjct: 146019 ctctcctcctcttcctcctct 145999
>gb|AC153009.4| Mus musculus BAC clone RP23-408I18 from chromosome 9, complete sequence Length = 194871 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 308 tctcctcctcttcctcctctg 328 ||||||||||||||||||||| Sbjct: 41982 tctcctcctcttcctcctctg 41962
>gb|AC138318.7| Mus musculus chromosome 3, clone RP23-358I23, complete sequence Length = 201126 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 307 ctctcctcctcttcctcctct 327 ||||||||||||||||||||| Sbjct: 142094 ctctcctcctcttcctcctct 142074
>gb|AC158586.8| Mus musculus chromosome 5, clone RP24-372A2, complete sequence Length = 196167 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 307 ctctcctcctcttcctcctct 327 ||||||||||||||||||||| Sbjct: 93736 ctctcctcctcttcctcctct 93716
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 306 gctctcctcctcttcctcctc 326 ||||||||||||||||||||| Sbjct: 9197866 gctctcctcctcttcctcctc 9197846
>gb|AC133081.4| Mus musculus BAC clone RP24-290O13 from chromosome 3, complete sequence Length = 180525 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 307 ctctcctcctcttcctcctct 327 ||||||||||||||||||||| Sbjct: 15314 ctctcctcctcttcctcctct 15294
>gb|AC132088.4| Mus musculus BAC clone RP24-410M8 from chromosome 19, complete sequence Length = 159681 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 307 ctctcctcctcttcctcctct 327 ||||||||||||||||||||| Sbjct: 137449 ctctcctcctcttcctcctct 137429
>gb|AC141566.4| Mus musculus BAC clone RP23-89G14 from chromosome 7, complete sequence Length = 236600 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 307 ctctcctcctcttcctcctct 327 ||||||||||||||||||||| Sbjct: 2972 ctctcctcctcttcctcctct 2952
>gb|AC124557.4| Mus musculus BAC clone RP23-247H15 from chromosome 19, complete sequence Length = 178544 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 307 ctctcctcctcttcctcctct 327 ||||||||||||||||||||| Sbjct: 169748 ctctcctcctcttcctcctct 169768
>gb|AC126053.3| Mus musculus BAC clone RP23-280L21 from chromosome 16, complete sequence Length = 217131 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 307 ctctcctcctcttcctcctct 327 ||||||||||||||||||||| Sbjct: 131585 ctctcctcctcttcctcctct 131565
>gb|AC125320.4| Mus musculus BAC clone RP23-351P13 from chromosome 15, complete sequence Length = 229480 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 307 ctctcctcctcttcctcctct 327 ||||||||||||||||||||| Sbjct: 192049 ctctcctcctcttcctcctct 192069
>gb|AC138288.13| Mus musculus chromosome 9, clone RP23-464K22, complete sequence Length = 235544 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 307 ctctcctcctcttcctcctct 327 ||||||||||||||||||||| Sbjct: 22555 ctctcctcctcttcctcctct 22575
>gb|AC125402.3| Mus musculus BAC clone RP24-539G2 from chromosome 5, complete sequence Length = 163773 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 307 ctctcctcctcttcctcctct 327 ||||||||||||||||||||| Sbjct: 12926 ctctcctcctcttcctcctct 12946
>gb|AC122836.4| Mus musculus BAC clone RP23-188B13 from 7, complete sequence Length = 222390 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 307 ctctcctcctcttcctcctct 327 ||||||||||||||||||||| Sbjct: 60705 ctctcctcctcttcctcctct 60725
>gb|AC122292.4| Mus musculus BAC clone RP23-256J8 from 10, complete sequence Length = 159736 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 307 ctctcctcctcttcctcctct 327 ||||||||||||||||||||| Sbjct: 130611 ctctcctcctcttcctcctct 130591
>gb|AC122798.3| Mus musculus BAC clone RP23-301A3 from 2, complete sequence Length = 206324 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 308 tctcctcctcttcctcctctg 328 ||||||||||||||||||||| Sbjct: 183672 tctcctcctcttcctcctctg 183692 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 308 tctcctcctcttcctcctct 327 |||||||||||||||||||| Sbjct: 183587 tctcctcctcttcctcctct 183606
>gb|AC117195.3| Mus musculus BAC clone RP23-93J3 from 9, complete sequence Length = 130515 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 297 ctcctcgtcgctctcctcctcttcctcct 325 |||||| || ||||||||||||||||||| Sbjct: 16627 ctcctcctctctctcctcctcttcctcct 16599
>emb|CR698369.2|CNS0G1T9 Tetraodon nigroviridis full-length cDNA Length = 2122 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 307 ctctcctcctcttcctcctct 327 ||||||||||||||||||||| Sbjct: 222 ctctcctcctcttcctcctct 202
>emb|AL592299.6| Human DNA sequence from clone RP11-498P10 on chromosome 1 Contains the 3' end of the RGL1 gene for ral guanine nucleotide dissociation stimulator-like 1 and the 3' end of the C1orf17 gene for chromosome 1 open reading frame 17, complete sequence Length = 79210 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 310 tcctcctcttcctcctctggg 330 ||||||||||||||||||||| Sbjct: 75340 tcctcctcttcctcctctggg 75320
>emb|AL391827.18| Human DNA sequence from clone RP11-63G20 on chromosome 10 Contains the 5' end of a novel gene (FLJ13114 FLJ40653) and two CpG islands, complete sequence Length = 183430 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 318 ttcctcctctggggatatgtc 338 ||||||||||||||||||||| Sbjct: 59830 ttcctcctctggggatatgtc 59850
>ref|NM_138383.2| Homo sapiens hypothetical protein BC002770 (LOC92154), mRNA Length = 4977 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 311 cctcctcttcctcctctgggg 331 ||||||||||||||||||||| Sbjct: 2754 cctcctcttcctcctctgggg 2774
>gb|AC090529.2| Rattus norvegicus strain Brown Norway clone RP31-160L19, complete sequence Length = 165686 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 306 gctctcctcctcttcctcctc 326 ||||||||||||||||||||| Sbjct: 71279 gctctcctcctcttcctcctc 71299
>emb|AL136529.14| Human DNA sequence from clone RP4-797K12 on chromosome 1p35-36.2 Contains the 3' end of a novel gene and the gene for a novel actin like protein (LOC81569), complete sequence Length = 154028 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 306 gctctcctcctcttcctcctc 326 ||||||||||||||||||||| Sbjct: 128637 gctctcctcctcttcctcctc 128657
>emb|AL035456.26|HS1099D15 Human DNA sequence from clone RP5-1099D15 on chromosome 20 Contains the 3' end of a novel gene, the JAG1 gene encoding Jagged 1 (involved in Alagille syndrome), a pseudogene aimilar to DNAJ protein, a CpG island, ESTs, STSs and GSSs, complete sequence Length = 125952 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 309 ctcctcctcttcctcctctgg 329 ||||||||||||||||||||| Sbjct: 650 ctcctcctcttcctcctctgg 630
>emb|BX248243.23| Zebrafish DNA sequence from clone CH211-225L7 in linkage group 7, complete sequence Length = 161572 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 298 tcctcgtcgctctcctcctcttcctcctc 326 ||||| ||||| ||||||||||||||||| Sbjct: 110748 tcctcatcgctgtcctcctcttcctcctc 110776
>ref|XM_784283.1| PREDICTED: Strongylocentrotus purpuratus similar to Multidrug resistance-associated protein 5 (LOC584425), mRNA Length = 2283 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 309 ctcctcctcttcctcctctgg 329 ||||||||||||||||||||| Sbjct: 264 ctcctcctcttcctcctctgg 244
>ref|XM_795696.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein LOC593887 (LOC593887), partial mRNA Length = 342 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 307 ctctcctcctcttcctcctct 327 ||||||||||||||||||||| Sbjct: 332 ctctcctcctcttcctcctct 312 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 308 tctcctcctcttcctcctctg 328 ||||||||||||||||||||| Sbjct: 127 tctcctcctcttcctcctctg 107
>emb|AL714030.6| Zebrafish DNA sequence from clone BUSM1-223C6 in linkage group 11 Contains part of a novel gene similar to CACNA1D (voltage-dependent calcium channel L type, alpha 1D subunit) and a CpG island, complete sequence Length = 90347 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 306 gctctcctcctcttcctcctc 326 ||||||||||||||||||||| Sbjct: 82449 gctctcctcctcttcctcctc 82469
>emb|AL670003.1|NCB9G16 Neurospora crassa DNA linkage group II BAC clone B9G16 Length = 69187 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 298 tcctcgtcgctctcctcctcttcctcctc 326 ||||||||| |||||||||||||||||| Sbjct: 66462 tcctcgtcgtcctcctcctcttcctcctc 66490
>emb|AL670002.1|NCB24G3 Neurospora crassa DNA linkage group II BAC clone B24G3 Length = 77166 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 298 tcctcgtcgctctcctcctcttcctcctc 326 ||||||||| |||||||||||||||||| Sbjct: 15876 tcctcgtcgtcctcctcctcttcctcctc 15904
>emb|AL137701.1|HSM802158 Homo sapiens mRNA; cDNA DKFZp434N1427 (from clone DKFZp434N1427); partial cds Length = 4798 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 311 cctcctcttcctcctctgggg 331 ||||||||||||||||||||| Sbjct: 1657 cctcctcttcctcctctgggg 1637
>emb|AL645589.24| Mouse DNA sequence from clone RP23-289H16 on chromosome 11 Contains the 3' end of the Vdac1 gene for voltage-dependent anion channel 1, a novel gene (9530068E07Rik), a ubiquinol-cytochrome c reductase subunit (Uqcr) pseudogene, a novel pseudogene, a ribosomal protein S28 (Rps28) pseudogene and a CpG island, complete sequence Length = 165536 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 307 ctctcctcctcttcctcctct 327 ||||||||||||||||||||| Sbjct: 145517 ctctcctcctcttcctcctct 145497
>emb|BX571969.5| Zebrafish DNA sequence from clone DKEY-93P1 in linkage group 11, complete sequence Length = 160905 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 306 gctctcctcctcttcctcctc 326 ||||||||||||||||||||| Sbjct: 159804 gctctcctcctcttcctcctc 159824
>gb|AC164163.2| Mus musculus BAC clone RP23-243L21 from chromosome 16, complete sequence Length = 178656 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 307 ctctcctcctcttcctcctct 327 ||||||||||||||||||||| Sbjct: 119718 ctctcctcctcttcctcctct 119738
>emb|BX571714.7| Zebrafish DNA sequence from clone DKEY-16L2 in linkage group 3, complete sequence Length = 240105 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 308 tctcctcctcttcctcctctg 328 ||||||||||||||||||||| Sbjct: 165402 tctcctcctcttcctcctctg 165422
>gb|AC153857.7| Mus musculus 6 BAC RP23-158G17 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 215780 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 307 ctctcctcctcttcctcctct 327 ||||||||||||||||||||| Sbjct: 134845 ctctcctcctcttcctcctct 134865
>gb|AC105299.44| Mus musculus strain C57BL/6J clone rp23-27h12 map 17, complete sequence Length = 221749 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 307 ctctcctcctcttcctcctct 327 ||||||||||||||||||||| Sbjct: 13268 ctctcctcctcttcctcctct 13288
>gb|AC073683.3| Mus musculus chromosome 17 clone RP23-124G7, complete sequence Length = 213137 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 306 gctctcctcctcttcctcctc 326 ||||||||||||||||||||| Sbjct: 140485 gctctcctcctcttcctcctc 140465
>gb|AC107315.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0032O19, from chromosome 3, complete sequence Length = 142248 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 306 gctctcctcctcttcctcctc 326 ||||||||||||||||||||| Sbjct: 88525 gctctcctcctcttcctcctc 88545
>gb|AC160983.2| Mus musculus BAC clone RP23-335A9 from chromosome 9, complete sequence Length = 188085 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 307 ctctcctcctcttcctcctct 327 ||||||||||||||||||||| Sbjct: 126939 ctctcctcctcttcctcctct 126959
>dbj|AK147509.1| Mus musculus cDNA, RIKEN full-length enriched library, clone:M5C1056N02 product:MYST histone acetyltransferase monocytic leukemia 4, full insert sequence Length = 6792 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 306 gctctcctcctcttcctcctc 326 ||||||||||||||||||||| Sbjct: 2702 gctctcctcctcttcctcctc 2682
>ref|XM_685740.1| PREDICTED: Danio rerio similar to chromatin-specific transcription elongation factor large subunit (LOC562348), mRNA Length = 3706 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 298 tcctcgtcgctctcctcctcttcctcctc 326 ||||| ||||| ||||||||||||||||| Sbjct: 3159 tcctcatcgctgtcctcctcttcctcctc 3131
>ref|XM_679130.1| PREDICTED: Danio rerio similar to fusion (involved in t(12;16) in malignant liposarcoma) (predicted), transcript variant 1 (LOC572734), mRNA Length = 2032 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 308 tctcctcctcttcctcctctg 328 ||||||||||||||||||||| Sbjct: 1671 tctcctcctcttcctcctctg 1651
>ref|XM_702306.1| PREDICTED: Danio rerio similar to fusion (involved in t(12;16) in malignant liposarcoma) (predicted), transcript variant 3 (LOC572734), mRNA Length = 1786 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 308 tctcctcctcttcctcctctg 328 ||||||||||||||||||||| Sbjct: 1710 tctcctcctcttcctcctctg 1690
>ref|XM_702305.1| PREDICTED: Danio rerio similar to fusion (involved in t(12;16) in malignant liposarcoma) (predicted), transcript variant 2 (LOC572734), mRNA Length = 1759 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 308 tctcctcctcttcctcctctg 328 ||||||||||||||||||||| Sbjct: 1683 tctcctcctcttcctcctctg 1663
>gb|AC164093.2| Mus musculus BAC clone RP23-131O16 from chromosome 16, complete sequence Length = 229443 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 307 ctctcctcctcttcctcctct 327 ||||||||||||||||||||| Sbjct: 61723 ctctcctcctcttcctcctct 61703
>gb|AC159000.2| Mus musculus BAC clone RP24-207K16 from chromosome 9, complete sequence Length = 152872 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 307 ctctcctcctcttcctcctct 327 ||||||||||||||||||||| Sbjct: 40563 ctctcctcctcttcctcctct 40543
>gb|AC158646.2| Mus musculus 10 BAC RP23-471J13 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 167591 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 306 gctctcctcctcttcctcctc 326 ||||||||||||||||||||| Sbjct: 34480 gctctcctcctcttcctcctc 34460
>dbj|AK048956.1| Mus musculus 0 day neonate cerebellum cDNA, RIKEN full-length enriched library, clone:C230085M23 product:unclassifiable, full insert sequence Length = 3639 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 307 ctctcctcctcttcctcctct 327 ||||||||||||||||||||| Sbjct: 717 ctctcctcctcttcctcctct 737
>dbj|AK045188.1| Mus musculus 9.5 days embryo parthenogenote cDNA, RIKEN full-length enriched library, clone:B130044K16 product:histone acetyltransferase, full insert sequence Length = 3235 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 306 gctctcctcctcttcctcctc 326 ||||||||||||||||||||| Sbjct: 3164 gctctcctcctcttcctcctc 3144
>gb|BC095974.1| Mus musculus MYST histone acetyltransferase monocytic leukemia 4, mRNA (cDNA clone IMAGE:30479825), partial cds Length = 2564 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 306 gctctcctcctcttcctcctc 326 ||||||||||||||||||||| Sbjct: 2478 gctctcctcctcttcctcctc 2458
>gb|AC153927.6| Mus musculus 6 BAC RP23-74G1 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 211584 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 307 ctctcctcctcttcctcctct 327 ||||||||||||||||||||| Sbjct: 3291 ctctcctcctcttcctcctct 3311
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 307 ctctcctcctcttcctcctct 327 ||||||||||||||||||||| Sbjct: 9316238 ctctcctcctcttcctcctct 9316258
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 306 gctctcctcctcttcctcctc 326 ||||||||||||||||||||| Sbjct: 9195699 gctctcctcctcttcctcctc 9195679
>gb|AC158806.4| Mus musculus 10 BAC RP24-89F13 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 227508 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 307 ctctcctcctcttcctcctct 327 ||||||||||||||||||||| Sbjct: 136545 ctctcctcctcttcctcctct 136525
>gb|AC011503.4|AC011503 Homo sapiens chromosome 19 clone CTB-92J24, complete sequence Length = 104082 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 307 ctctcctcctcttcctcctct 327 ||||||||||||||||||||| Sbjct: 27673 ctctcctcctcttcctcctct 27653 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 307 ctctcctcctcttcctcctc 326 |||||||||||||||||||| Sbjct: 27280 ctctcctcctcttcctcctc 27261
>gb|AC157947.2| Mus musculus BAC clone RP23-238L21 from chromosome 9, complete sequence Length = 174016 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 307 ctctcctcctcttcctcctct 327 ||||||||||||||||||||| Sbjct: 84369 ctctcctcctcttcctcctct 84349
>gb|AC020763.6| Homo sapiens chromosome 16 clone RP11-394B2, complete sequence Length = 200838 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 311 cctcctcttcctcctctgggg 331 ||||||||||||||||||||| Sbjct: 110272 cctcctcttcctcctctgggg 110292
>gb|AF263313.1|AF263313 Homo sapiens STE20-like kinase mRNA, partial cds Length = 3147 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 311 cctcctcttcctcctctgggg 331 ||||||||||||||||||||| Sbjct: 1003 cctcctcttcctcctctgggg 983
>ref|XM_238534.3| PREDICTED: Rattus norvegicus protein kinase C substrate 80K-H (predicted) (Prkcsh_predicted), mRNA Length = 1803 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 309 ctcctcctcttcctcctctgg 329 ||||||||||||||||||||| Sbjct: 1208 ctcctcctcttcctcctctgg 1188
>ref|NM_200542.1| Danio rerio zgc:65873 (zgc:65873), mRNA Length = 1516 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 309 ctcctcctcttcctcctctgg 329 ||||||||||||||||||||| Sbjct: 560 ctcctcctcttcctcctctgg 540
>gb|AC154843.2| Mus musculus BAC clone RP23-58N15 from chromosome 14, complete sequence Length = 199716 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 308 tctcctcctcttcctcctctg 328 ||||||||||||||||||||| Sbjct: 25827 tctcctcctcttcctcctctg 25847
>gb|AC154228.1| Mus musculus BAC clone RP24-143I4 from chromosome 14, complete sequence Length = 164697 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 25 ccaacaaatggcaagttattc 45 ||||||||||||||||||||| Sbjct: 44058 ccaacaaatggcaagttattc 44038
>dbj|AB020688.1| Homo sapiens mRNA for KIAA0881 protein, partial cds Length = 4242 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 311 cctcctcttcctcctctgggg 331 ||||||||||||||||||||| Sbjct: 1406 cctcctcttcctcctctgggg 1386
>gb|AF061943.1|AF061943 Homo sapiens prostate derived STE20-like kinase PSK mRNA, complete cds Length = 4971 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 311 cctcctcttcctcctctgggg 331 ||||||||||||||||||||| Sbjct: 1761 cctcctcttcctcctctgggg 1741
>gb|AF222800.1|AF222800 Mus musculus histone acetyltransferase querkopf mRNA, complete cds Length = 6909 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 306 gctctcctcctcttcctcctc 326 ||||||||||||||||||||| Sbjct: 2741 gctctcctcctcttcctcctc 2721
>gb|AC105300.24| Mus musculus strain C57BL/6J clone rp23-291e5 map 17, complete sequence Length = 168882 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 307 ctctcctcctcttcctcctct 327 ||||||||||||||||||||| Sbjct: 110089 ctctcctcctcttcctcctct 110069
>gb|BC066398.1| Danio rerio zgc:65873, mRNA (cDNA clone MGC:77373 IMAGE:6969060), complete cds Length = 1536 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 309 ctcctcctcttcctcctctgg 329 ||||||||||||||||||||| Sbjct: 560 ctcctcctcttcctcctctgg 540
>gb|AC151533.3| Mus musculus BAC clone RP24-92D11 from 14, complete sequence Length = 230285 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 306 gctctcctcctcttcctcctc 326 ||||||||||||||||||||| Sbjct: 169444 gctctcctcctcttcctcctc 169464
>emb|CT486004.9| Mouse DNA sequence from clone RP23-424K3 on chromosome 9, complete sequence Length = 212874 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 307 ctctcctcctcttcctcctct 327 ||||||||||||||||||||| Sbjct: 7962 ctctcctcctcttcctcctct 7942
>gb|AC123676.9| Mus musculus chromosome 1, clone RP23-275F9, complete sequence Length = 169201 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 307 ctctcctcctcttcctcctct 327 ||||||||||||||||||||| Sbjct: 41977 ctctcctcctcttcctcctct 41957
>emb|AL928885.9| Zebrafish DNA sequence from clone CH211-195G24 in linkage group 3, complete sequence Length = 196857 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 308 tctcctcctcttcctcctctg 328 ||||||||||||||||||||| Sbjct: 47187 tctcctcctcttcctcctctg 47207
>dbj|AP003965.2| Homo sapiens genomic DNA, chromosome 11q, clone:CMB9-31O9, complete sequence Length = 121852 Score = 42.1 bits (21), Expect = 1.8 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Minus Query: 298 tcctcgtcgctctcctcctcttcctcctc 326 ||||||||||| ||||||||||||||||| Sbjct: 49603 tcctcgtcgct-tcctcctcttcctcctc 49576
>dbj|AP006198.1| Homo sapiens genomic DNA, chromosome 6, clone:RP11-410D4, complete sequence Length = 139671 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 307 ctctcctcctcttcctcctct 327 ||||||||||||||||||||| Sbjct: 18931 ctctcctcctcttcctcctct 18951
>dbj|AK122592.1| Homo sapiens mRNA for FLJ00418 protein Length = 4168 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 311 cctcctcttcctcctctgggg 331 ||||||||||||||||||||| Sbjct: 1759 cctcctcttcctcctctgggg 1739
>emb|BX284111.7| Mouse DNA sequence from clone RP23-217B8 on chromosome X, complete sequence Length = 223318 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 306 gctctcctcctcttcctcctc 326 ||||||||||||||||||||| Sbjct: 164628 gctctcctcctcttcctcctc 164648
>emb|CT030235.12| Mouse DNA sequence from clone RP23-240F19 on chromosome 16, complete sequence Length = 236028 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 307 ctctcctcctcttcctcctct 327 ||||||||||||||||||||| Sbjct: 166845 ctctcctcctcttcctcctct 166825
>emb|CT486006.6| Mouse DNA sequence from clone RP23-433C10 on chromosome 9, complete sequence Length = 208668 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 297 ctcctcgtcgctctcctcctcttcctcct 325 |||||| || ||||||||||||||||||| Sbjct: 147533 ctcctcctctctctcctcctcttcctcct 147505
>gb|AC162937.6| Mus musculus BAC clone RP23-120I8 from chromosome 9, complete sequence Length = 207210 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 307 ctctcctcctcttcctcctct 327 ||||||||||||||||||||| Sbjct: 98426 ctctcctcctcttcctcctct 98406
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 307 ctctcctcctcttcctcctct 327 ||||||||||||||||||||| Sbjct: 9387935 ctctcctcctcttcctcctct 9387955
>gb|AC159261.4| Mus musculus BAC clone RP24-80C13 from chromosome 13, complete sequence Length = 230437 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 307 ctctcctcctcttcctcctct 327 ||||||||||||||||||||| Sbjct: 95850 ctctcctcctcttcctcctct 95830
>gb|AC148978.3| Mus musculus BAC clone RP23-359K8 from 14, complete sequence Length = 241799 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 306 gctctcctcctcttcctcctc 326 ||||||||||||||||||||| Sbjct: 18594 gctctcctcctcttcctcctc 18614
>gb|AC129184.3| Mus musculus BAC clone RP23-358F24 from 5, complete sequence Length = 203369 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 307 ctctcctcctcttcctcctct 327 ||||||||||||||||||||| Sbjct: 11801 ctctcctcctcttcctcctct 11821
>emb|AL929179.6| Mouse DNA sequence from clone RP23-428M4 on chromosome 2, complete sequence Length = 117995 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 307 ctctcctcctcttcctcctct 327 ||||||||||||||||||||| Sbjct: 44450 ctctcctcctcttcctcctct 44430
>emb|CR974566.12| Pig DNA sequence from clone CH242-112C22 on chromosome 17, complete sequence Length = 164668 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 107 gctgatgactttcttcagcat 127 ||||||||||||||||||||| Sbjct: 87035 gctgatgactttcttcagcat 87055
>gb|DQ294964.1| Weissella cibaria strain Uga69 16S rRNA gene, complete sequence Length = 1565 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 454 aggagaagctggggcaggaacacctcaaa 482 ||||||| ||| ||||||||||||||||| Sbjct: 1533 aggagaacctgcggcaggaacacctcaaa 1561
>dbj|AP005233.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-211G23, complete sequence Length = 157200 Score = 42.1 bits (21), Expect = 1.8 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Minus Query: 298 tcctcgtcgctctcctcctcttcctcctc 326 ||||||||||| ||||||||||||||||| Sbjct: 72582 tcctcgtcgct-tcctcctcttcctcctc 72555
>gb|AC171198.1| Mus musculus BAC clone RP23-251J18 from chromosome 9, complete sequence Length = 178608 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 307 ctctcctcctcttcctcctct 327 ||||||||||||||||||||| Sbjct: 53681 ctctcctcctcttcctcctct 53661
>gb|AC171201.1| Mus musculus BAC clone RP24-303H7 from chromosome 9, complete sequence Length = 170322 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 307 ctctcctcctcttcctcctct 327 ||||||||||||||||||||| Sbjct: 7127 ctctcctcctcttcctcctct 7107
>gb|AC115031.11| Mus musculus chromosome 3, clone RP24-257J5, complete sequence Length = 170460 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 306 gctctcctcctcttcctcctc 326 ||||||||||||||||||||| Sbjct: 34016 gctctcctcctcttcctcctc 33996
>emb|AL844577.3| Mouse DNA sequence from clone RP23-129P1 on chromosome 2, complete sequence Length = 204516 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 308 tctcctcctcttcctcctctg 328 ||||||||||||||||||||| Sbjct: 98592 tctcctcctcttcctcctctg 98572 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 308 tctcctcctcttcctcctct 327 |||||||||||||||||||| Sbjct: 98677 tctcctcctcttcctcctct 98658
>emb|AL359174.14| Human DNA sequence from clone RP11-423D17 on chromosome 6, complete sequence Length = 146372 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 307 ctctcctcctcttcctcctct 327 ||||||||||||||||||||| Sbjct: 128247 ctctcctcctcttcctcctct 128267
>gb|AC168046.7| Mus musculus chromosome 8, clone RP24-335A7, complete sequence Length = 160659 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 307 ctctcctcctcttcctcctct 327 ||||||||||||||||||||| Sbjct: 30187 ctctcctcctcttcctcctct 30207 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 308 tctcctcctcttcctcctct 327 |||||||||||||||||||| Sbjct: 30591 tctcctcctcttcctcctct 30610 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 ctctcctcctcttcctcctc 326 |||||||||||||||||||| Sbjct: 30545 ctctcctcctcttcctcctc 30564 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 308 tctcctcctcttcctcctct 327 |||||||||||||||||||| Sbjct: 30465 tctcctcctcttcctcctct 30484 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 308 tctcctcctcttcctcctct 327 |||||||||||||||||||| Sbjct: 30317 tctcctcctcttcctcctct 30336
>dbj|AB001509.1| Mesocricetus auratus gene for delta-sarcoglycan, promoter region Length = 3547 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 307 ctctcctcctcttcctcctct 327 ||||||||||||||||||||| Sbjct: 430 ctctcctcctcttcctcctct 410
>dbj|AP002530.2| Homo sapiens genomic DNA, chromosome 6q21, anti-oncogene region, section 3/4 Length = 300000 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 307 ctctcctcctcttcctcctct 327 ||||||||||||||||||||| Sbjct: 104220 ctctcctcctcttcctcctct 104240
>dbj|AB042030.1| Homo sapiens genomic DNA, chromosome 6q21, BAC clone:610J6, complete sequence Length = 111927 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 307 ctctcctcctcttcctcctct 327 ||||||||||||||||||||| Sbjct: 39244 ctctcctcctcttcctcctct 39264
>gb|AC114650.10| Mus musculus chromosome 3, clone RP24-151O6, complete sequence Length = 185956 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 308 tctcctcctcttcctcctct 327 |||||||||||||||||||| Sbjct: 83 tctcctcctcttcctcctct 64
>gb|AC102766.5| Mus musculus chromosome 5, clone RP23-20L22, complete sequence Length = 203741 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 307 ctctcctcctcttcctcctc 326 |||||||||||||||||||| Sbjct: 69173 ctctcctcctcttcctcctc 69154
>gb|AC153609.2| Mus musculus 6 BAC RP23-77I23 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 221782 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 ctctcctcctcttcctcctc 326 |||||||||||||||||||| Sbjct: 156927 ctctcctcctcttcctcctc 156946
>gb|AC103636.11| Mus musculus chromosome 5, clone RP24-373A18, complete sequence Length = 185727 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 307 ctctcctcctcttcctcctc 326 |||||||||||||||||||| Sbjct: 168357 ctctcctcctcttcctcctc 168338
>ref|NM_104378.1| Arabidopsis thaliana binding AT1G55040 mRNA, complete cds Length = 2783 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 309 ctcctcctcttcctcctctg 328 |||||||||||||||||||| Sbjct: 2482 ctcctcctcttcctcctctg 2463
>gb|AC108914.8| Mus musculus chromosome 1, clone RP23-435E15, complete sequence Length = 212494 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 ctctcctcctcttcctcctc 326 |||||||||||||||||||| Sbjct: 15942 ctctcctcctcttcctcctc 15961
>ref|NM_180787.1| Arabidopsis thaliana unknown protein AT5G41810 transcript variant AT5G41810.1 mRNA, complete cds Length = 1291 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 ctctcctcctcttcctcctc 326 |||||||||||||||||||| Sbjct: 757 ctctcctcctcttcctcctc 776
>ref|NM_123546.3| Arabidopsis thaliana unknown protein AT5G41810 transcript variant AT5G41810.2 mRNA, complete cds Length = 1269 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 ctctcctcctcttcctcctc 326 |||||||||||||||||||| Sbjct: 735 ctctcctcctcttcctcctc 754
>gb|AC153490.1| Mus musculus BAC RP23-210M12 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 145026 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 308 tctcctcctcttcctcctct 327 |||||||||||||||||||| Sbjct: 90361 tctcctcctcttcctcctct 90342
>ref|NM_126145.2| Arabidopsis thaliana AZF1 (ARABIDOPSIS ZINC-FINGER PROTEIN 1); nucleic acid binding / transcription factor/ zinc ion binding AT5G67450 (AZF1) mRNA, complete cds Length = 1157 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 308 tctcctcctcttcctcctct 327 |||||||||||||||||||| Sbjct: 305 tctcctcctcttcctcctct 324
>gb|AC147806.5| Mus musculus chromosome 1, clone RP23-6O16, complete sequence Length = 229200 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 308 tctcctcctcttcctcctct 327 |||||||||||||||||||| Sbjct: 2274 tctcctcctcttcctcctct 2293
>gb|AC111034.11| Mus musculus chromosome 8, clone RP23-202K1, complete sequence Length = 200303 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 308 tctcctcctcttcctcctct 327 |||||||||||||||||||| Sbjct: 82811 tctcctcctcttcctcctct 82830
>gb|BC104044.1| Homo sapiens kinesin family member 7, mRNA (cDNA clone MGC:120653 IMAGE:40026959), complete cds Length = 2822 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 309 ctcctcctcttcctcctctg 328 |||||||||||||||||||| Sbjct: 506 ctcctcctcttcctcctctg 487
>gb|AC124664.14| Mus musculus chromosome 1, clone RP23-103B18, complete sequence Length = 220456 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 ctctcctcctcttcctcctc 326 |||||||||||||||||||| Sbjct: 7121 ctctcctcctcttcctcctc 7140
>gb|AC168212.7| Mus musculus chromosome 18, clone RP23-290N19, complete sequence Length = 197719 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 309 ctcctcctcttcctcctctg 328 |||||||||||||||||||| Sbjct: 56712 ctcctcctcttcctcctctg 56693
>gb|AC157087.2| Mus musculus BAC clone RP23-287O24 from chromosome 9, complete sequence Length = 226149 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 307 ctctcctcctcttcctcctc 326 |||||||||||||||||||| Sbjct: 112469 ctctcctcctcttcctcctc 112450
>gb|AC163666.2| Mus musculus BAC clone RP23-46B12 from chromosome 9, complete sequence Length = 213408 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 308 tctcctcctcttcctcctct 327 |||||||||||||||||||| Sbjct: 6844 tctcctcctcttcctcctct 6863
>gb|AC116121.8| Mus musculus chromosome 8, clone RP23-79K4, complete sequence Length = 216001 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 308 tctcctcctcttcctcctct 327 |||||||||||||||||||| Sbjct: 141554 tctcctcctcttcctcctct 141535
>gb|AC131747.5| Mus musculus BAC clone RP23-36O24 from chromosome 14, complete sequence Length = 212930 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 308 tctcctcctcttcctcctct 327 |||||||||||||||||||| Sbjct: 50302 tctcctcctcttcctcctct 50321
>gb|AC131909.8| Mus musculus chromosome 5, clone RP24-250G11, complete sequence Length = 145479 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 455 ggagaagctggggcaggaac 474 |||||||||||||||||||| Sbjct: 67414 ggagaagctggggcaggaac 67433
>ref|NM_184260.2| Oryza sativa (japonica cultivar-group), mRNA Length = 913 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 299 cctcgtcgctctcctcctcttcctcctc 326 |||||||| |||||||||||||||||| Sbjct: 581 cctcgtcgtcctcctcctcttcctcctc 554
>gb|AC121870.2| Mus musculus chromosome 9 clone RP24-121D5, complete sequence Length = 191747 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 307 ctctcctcctcttcctcctc 326 |||||||||||||||||||| Sbjct: 87521 ctctcctcctcttcctcctc 87502
>gb|AC137928.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0040B10, complete sequence Length = 150825 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 ctctcctcctcttcctcctc 326 |||||||||||||||||||| Sbjct: 52251 ctctcctcctcttcctcctc 52270
>gb|AC120878.10| Mus musculus chromosome 1, clone RP24-548K2, complete sequence Length = 232085 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 ctcctcctcttcctcctctg 328 |||||||||||||||||||| Sbjct: 168349 ctcctcctcttcctcctctg 168368
>gb|AC101661.7| Mus musculus chromosome 1, clone RP23-26A10, complete sequence Length = 228933 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 308 tctcctcctcttcctcctct 327 |||||||||||||||||||| Sbjct: 29244 tctcctcctcttcctcctct 29225
>gb|CP000110.1| Synechococcus sp. CC9605, complete genome Length = 2510659 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 gcatctgccatgacggcatg 143 |||||||||||||||||||| Sbjct: 2425779 gcatctgccatgacggcatg 2425798
>ref|XM_512286.1| PREDICTED: Pan troglodytes similar to chromatin assembly factor 1, subunit A (p150); chromatin assembly factor I (150 kDa) (LOC455603), mRNA Length = 3246 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 303 gtcgctctcctcctcttcctcctc 326 ||||| |||||||||||||||||| Sbjct: 3114 gtcgccctcctcctcttcctcctc 3091
>ref|XM_511030.1| PREDICTED: Pan troglodytes solute carrier family 9 (sodium/hydrogen exchanger), isoform 5 (LOC454163), mRNA Length = 3762 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 303 gtcgctctcctcctcttcctcctc 326 ||||||||||||||| |||||||| Sbjct: 2217 gtcgctctcctcctcctcctcctc 2194
>gb|AC167017.4| Mus musculus BAC clone RP24-86L13 from chromosome 9, complete sequence Length = 183068 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 ctctcctcctcttcctcctc 326 |||||||||||||||||||| Sbjct: 17542 ctctcctcctcttcctcctc 17561
>gb|AC166821.2| Mus musculus BAC clone RP24-68F22 from chromosome 17, complete sequence Length = 202649 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 308 tctcctcctcttcctcctct 327 |||||||||||||||||||| Sbjct: 96597 tctcctcctcttcctcctct 96616
>gb|AC169128.2| Mus musculus BAC clone RP23-306C13 from chromosome 13, complete sequence Length = 185965 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 308 tctcctcctcttcctcctct 327 |||||||||||||||||||| Sbjct: 34192 tctcctcctcttcctcctct 34173
>gb|AC167812.4| Mus musculus BAC clone RP24-299F5 from chromosome 18, complete sequence Length = 193523 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 ctctcctcctcttcctcctc 326 |||||||||||||||||||| Sbjct: 181561 ctctcctcctcttcctcctc 181580 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 308 tctcctcctcttcctcctct 327 |||||||||||||||||||| Sbjct: 8016 tctcctcctcttcctcctct 7997
>gb|AC164157.3| Mus musculus BAC clone RP24-297C1 from chromosome 6, complete sequence Length = 176868 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 308 tctcctcctcttcctcctct 327 |||||||||||||||||||| Sbjct: 54240 tctcctcctcttcctcctct 54221
>gb|AC120404.25| Mus musculus chromosome 6, clone RP24-405O23, complete sequence Length = 202146 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 308 tctcctcctcttcctcctct 327 |||||||||||||||||||| Sbjct: 68230 tctcctcctcttcctcctct 68249
>gb|AC161342.10| Mus musculus chromosome 1, clone RP23-313K17, complete sequence Length = 181572 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 308 tctcctcctcttcctcctct 327 |||||||||||||||||||| Sbjct: 137782 tctcctcctcttcctcctct 137801
>ref|XM_510584.1| PREDICTED: Pan troglodytes LOC453640 (LOC453640), mRNA Length = 3522 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 309 ctcctcctcttcctcctctg 328 |||||||||||||||||||| Sbjct: 1515 ctcctcctcttcctcctctg 1496
>ref|XM_480518.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1154 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 253 atgatggcctcgtcgccggagtcg 276 |||||||| ||||||||||||||| Sbjct: 514 atgatggcgtcgtcgccggagtcg 537
>ref|XM_507571.1| PREDICTED Oryza sativa (japonica cultivar-group), P0035F08.26 mRNA Length = 1155 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 253 atgatggcctcgtcgccggagtcg 276 |||||||| ||||||||||||||| Sbjct: 515 atgatggcgtcgtcgccggagtcg 538
>ref|XM_507158.2| PREDICTED Oryza sativa (japonica cultivar-group), P0035F08.26 mRNA Length = 1170 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 253 atgatggcctcgtcgccggagtcg 276 |||||||| ||||||||||||||| Sbjct: 530 atgatggcgtcgtcgccggagtcg 553
>ref|XM_471609.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 447 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 ctctcctcctcttcctcctc 326 |||||||||||||||||||| Sbjct: 164 ctctcctcctcttcctcctc 183
>ref|NM_005483.2| Homo sapiens chromatin assembly factor 1, subunit A (p150) (CHAF1A), mRNA Length = 3344 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 303 gtcgctctcctcctcttcctcctc 326 ||||| |||||||||||||||||| Sbjct: 2839 gtcgccctcctcctcttcctcctc 2816
>gb|AC115898.22| Mus musculus chromosome 7, clone RP24-444C13, complete sequence Length = 177754 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 308 tctcctcctcttcctcctct 327 |||||||||||||||||||| Sbjct: 47401 tctcctcctcttcctcctct 47420
>ref|NM_195784.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0027A14.18), mRNA Length = 789 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 ctctcctcctcttcctcctc 326 |||||||||||||||||||| Sbjct: 165 ctctcctcctcttcctcctc 184
>gb|AY520817.1| Homo sapiens smooth muscle myosin heavy chain isoform SM2 (MYH11) mRNA, complete cds; alternatively spliced Length = 6886 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 73 gggggactagtggagatgaaactg 96 |||||||||||||||| ||||||| Sbjct: 58 gggggactagtggagaggaaactg 35
>gb|AY520816.1| Homo sapiens smooth muscle myosin heavy chain isoform SM1 (MYH11) mRNA, complete cds; alternatively spliced Length = 6847 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 73 gggggactagtggagatgaaactg 96 |||||||||||||||| ||||||| Sbjct: 58 gggggactagtggagaggaaactg 35
>ref|NM_198525.1| Homo sapiens kinesin family member 7 (KIF7), mRNA Length = 3121 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 309 ctcctcctcttcctcctctg 328 |||||||||||||||||||| Sbjct: 533 ctcctcctcttcctcctctg 514
>ref|NM_004594.1| Homo sapiens solute carrier family 9 (sodium/hydrogen exchanger), member 5 (SLC9A5), mRNA Length = 3761 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 303 gtcgctctcctcctcttcctcctc 326 ||||||||||||||| |||||||| Sbjct: 2199 gtcgctctcctcctcctcctcctc 2176
>ref|NM_003107.2| Homo sapiens SRY (sex determining region Y)-box 4 (SOX4), mRNA Length = 4912 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 299 cctcgtcgctctcctcctcttcctcctc 326 ||||||| | |||||||||||||||||| Sbjct: 1939 cctcgtcccactcctcctcttcctcctc 1966
>gb|AC162466.6| Mus musculus 6 BAC RP23-196O2 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 186817 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 ctctcctcctcttcctcctc 326 |||||||||||||||||||| Sbjct: 92328 ctctcctcctcttcctcctc 92347
>gb|AC160865.10| Mus musculus 10 BAC RP23-464F22 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 170901 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 307 ctctcctcctcttcctcctc 326 |||||||||||||||||||| Sbjct: 128229 ctctcctcctcttcctcctc 128210
>gb|BC074684.1| Xenopus tropicalis nuclear receptor binding protein, mRNA (cDNA clone MGC:69507 IMAGE:5336424), complete cds Length = 3046 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 307 ctctcctcctcttcctcctc 326 |||||||||||||||||||| Sbjct: 255 ctctcctcctcttcctcctc 236
>gb|AC119820.20| Mus musculus chromosome 1, clone RP23-148M18, complete sequence Length = 183287 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 308 tctcctcctcttcctcctct 327 |||||||||||||||||||| Sbjct: 116175 tctcctcctcttcctcctct 116194
>gb|AC139637.17| Mus musculus chromosome 15, clone RP24-253M12, complete sequence Length = 136076 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 ctctcctcctcttcctcctc 326 |||||||||||||||||||| Sbjct: 54679 ctctcctcctcttcctcctc 54698
>gb|AC124083.14| Mus musculus chromosome 5, clone RP24-400H4, complete sequence Length = 172336 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 308 tctcctcctcttcctcctct 327 |||||||||||||||||||| Sbjct: 132074 tctcctcctcttcctcctct 132093
>gb|AC102136.6| Mus musculus chromosome 3, clone RP23-269G19, complete sequence Length = 186659 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 308 tctcctcctcttcctcctct 327 |||||||||||||||||||| Sbjct: 155616 tctcctcctcttcctcctct 155597
>gb|AC157610.2| Mus musculus chromosome 15, clone RP23-77H12, complete sequence Length = 164913 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 ctcctcctcttcctcctctg 328 |||||||||||||||||||| Sbjct: 7407 ctcctcctcttcctcctctg 7426 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,889,163 Number of Sequences: 3902068 Number of extensions: 4889163 Number of successful extensions: 213657 Number of sequences better than 10.0: 868 Number of HSP's better than 10.0 without gapping: 872 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 207927 Number of HSP's gapped (non-prelim): 5726 length of query: 532 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 509 effective length of database: 17,143,297,704 effective search space: 8725938531336 effective search space used: 8725938531336 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)