Clone Name | rbasd16g06 |
---|---|
Clone Library Name | barley_pub |
>dbj|AB109216.1| Triticum aestivum mRNA for cysteine protease, complete cds Length = 1260 Score = 474 bits (239), Expect = e-130 Identities = 356/391 (91%), Gaps = 3/391 (0%) Strand = Plus / Minus Query: 245 atactaactacatgacgggataagcaccgtacatggccatgccacacagcccgcggggcc 304 ||||||||||||||||||| || |||||||||||||| |||||||||||||||||||||| Sbjct: 1153 atactaactacatgacggggtaggcaccgtacatggcgatgccacacagcccgcggggcc 1094 Query: 305 cgtcggctcccctacgcatgaagaagaagccattctggccccacgtctggccccacgagt 364 ||||||||||||| |||| |||||||||||| ||||| ||||| ||||| |||||||||| Sbjct: 1093 cgtcggctcccctgcgcacgaagaagaagcccttctgaccccaggtctgtccccacgagt 1034 Query: 365 tcttggcgatccagtactcttctcctgcgccggtgaccccgtagccgaccaccgtcacca 424 ||||||||||||||||||||||||| || |||||||| |||||||||||||||||||||| Sbjct: 1033 tcttggcgatccagtactcttctccggcaccggtgactccgtagccgaccaccgtcacca 974 Query: 425 cgtggttctggctggtggtgcacggccccttgtacacgccggacttgtagttctgcagca 484 ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||| | Sbjct: 973 cgtggttctggctggtggtgcacggccccctgtacacgccggacttgtagtcctgcagga 914 Query: 485 cggagccgctcccgtcgatctggacggtcaccggcgtcctgagcacggccagcgccagcg 544 ||| ||||||||||||||||||||||||||||||| ||| |||||| ||||||||||| | Sbjct: 913 cggggccgctcccgtcgatctggacggtcaccggcctcccgagcac-gccagcgccag-g 856 Query: 545 cgtcctcgttgctccccggctgcacgtcctggacgccggtgatcttgccgatgcgtcggg 604 | |||| |||| |||||| | || ||||||||||||||||| ||||||| || |||| Sbjct: 855 ggctctcgctgctgcccggccgtacatcctggacgccggtgattttgccgacacg-cggg 797 Query: 605 cggcgtcgtgcacctcgcatctgcctcgctt 635 | | |||||||||| |||||||||||||||| Sbjct: 796 ctgtgtcgtgcaccgcgcatctgcctcgctt 766
>ref|NM_183859.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1074 Score = 63.9 bits (32), Expect = 6e-07 Identities = 38/40 (95%) Strand = Plus / Minus Query: 343 ccccacgtctggccccacgagttcttggcgatccagtact 382 |||||||||| |||||||||||||||||| |||||||||| Sbjct: 983 ccccacgtcttgccccacgagttcttggctatccagtact 944
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 63.9 bits (32), Expect = 6e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 343 ccccacgtctggccccacgagttcttggcgatccagtact 382 |||||||||| |||||||||||||||||| |||||||||| Sbjct: 12728727 ccccacgtcttgccccacgagttcttggctatccagtact 12728766 Score = 60.0 bits (30), Expect = 9e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 337 ttctggccccacgtctggccccacgagttcttggcgatccagtact 382 |||| ||||||||||| |||||||||||||||||| | |||||||| Sbjct: 6395235 ttctcgccccacgtcttgccccacgagttcttggccacccagtact 6395280 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 354 gccccacgagttcttggcgatccagtact 382 ||||||||||||||||||||||||||||| Sbjct: 6400964 gccccacgagttcttggcgatccagtact 6400936 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 343 ccccacgtctggccccacgagttcttggcgatccagtact 382 |||||||||| ||||||||||||||||||| |||||||| Sbjct: 13826295 ccccacgtctttccccacgagttcttggcgacccagtact 13826256 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 354 gccccacgagttcttggcgatccagtactc 383 |||||||||||||||| ||||||||||||| Sbjct: 39495697 gccccacgagttcttgacgatccagtactc 39495668 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 357 ccacgagttcttggcgatccagtact 382 |||||||||||||||||||||||||| Sbjct: 13843214 ccacgagttcttggcgatccagtact 13843189 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 357 ccacgagttcttggcgatccagtact 382 |||||||||||||||||||||||||| Sbjct: 13821085 ccacgagttcttggcgatccagtact 13821110 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 357 ccacgagttcttggcgatccagtact 382 |||||||||||||||||||||||||| Sbjct: 12735936 ccacgagttcttggcgatccagtact 12735911 Score = 48.1 bits (24), Expect = 0.036 Identities = 36/40 (90%) Strand = Plus / Plus Query: 343 ccccacgtctggccccacgagttcttggcgatccagtact 382 |||||||||| ||||||||||||||||| | |||||||| Sbjct: 13830962 ccccacgtcttaccccacgagttcttggccagccagtact 13831001 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 191 cattaatgcatcttatttta 210 |||||||||||||||||||| Sbjct: 6143689 cattaatgcatcttatttta 6143670
>dbj|AP003143.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0489E06 Length = 140229 Score = 63.9 bits (32), Expect = 6e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 343 ccccacgtctggccccacgagttcttggcgatccagtact 382 |||||||||| |||||||||||||||||| |||||||||| Sbjct: 9126 ccccacgtcttgccccacgagttcttggctatccagtact 9165 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 357 ccacgagttcttggcgatccagtact 382 |||||||||||||||||||||||||| Sbjct: 16335 ccacgagttcttggcgatccagtact 16310
>dbj|AP002869.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0554D10 Length = 158723 Score = 63.9 bits (32), Expect = 6e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 343 ccccacgtctggccccacgagttcttggcgatccagtact 382 |||||||||| |||||||||||||||||| |||||||||| Sbjct: 95756 ccccacgtcttgccccacgagttcttggctatccagtact 95795 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 357 ccacgagttcttggcgatccagtact 382 |||||||||||||||||||||||||| Sbjct: 102965 ccacgagttcttggcgatccagtact 102940
>gb|U32430.1|TAU32430 Triticum aestivum thiol protease mRNA, complete cds Length = 1353 Score = 63.9 bits (32), Expect = 6e-07 Identities = 38/40 (95%) Strand = Plus / Minus Query: 343 ccccacgtctggccccacgagttcttggcgatccagtact 382 |||||| ||| ||||||||||||||||||||||||||||| Sbjct: 1052 ccccacttctcgccccacgagttcttggcgatccagtact 1013
>ref|NM_188465.1| Oryza sativa (japonica cultivar-group), Ozsa8160 predicted mRNA Length = 1050 Score = 60.0 bits (30), Expect = 9e-06 Identities = 42/46 (91%) Strand = Plus / Minus Query: 337 ttctggccccacgtctggccccacgagttcttggcgatccagtact 382 |||| ||||||||||| |||||||||||||||||| | |||||||| Sbjct: 965 ttctcgccccacgtcttgccccacgagttcttggccacccagtact 920
>dbj|AP002861.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0665D10 Length = 134967 Score = 60.0 bits (30), Expect = 9e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 337 ttctggccccacgtctggccccacgagttcttggcgatccagtact 382 |||| ||||||||||| |||||||||||||||||| | |||||||| Sbjct: 17630 ttctcgccccacgtcttgccccacgagttcttggccacccagtact 17675 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 354 gccccacgagttcttggcgatccagtact 382 ||||||||||||||||||||||||||||| Sbjct: 23359 gccccacgagttcttggcgatccagtact 23331
>dbj|AP001633.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0515G01 Length = 175072 Score = 60.0 bits (30), Expect = 9e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 337 ttctggccccacgtctggccccacgagttcttggcgatccagtact 382 |||| ||||||||||| |||||||||||||||||| | |||||||| Sbjct: 166301 ttctcgccccacgtcttgccccacgagttcttggccacccagtact 166346 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 354 gccccacgagttcttggcgatccagtact 382 ||||||||||||||||||||||||||||| Sbjct: 172030 gccccacgagttcttggcgatccagtact 172002
>ref|NM_188466.1| Oryza sativa (japonica cultivar-group), Ozsa8161 predicted mRNA Length = 1101 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 354 gccccacgagttcttggcgatccagtact 382 ||||||||||||||||||||||||||||| Sbjct: 999 gccccacgagttcttggcgatccagtact 971
>gb|AY253445.1| Triticum aestivum P9346A1-2-5-1 putative thiol protease mRNA, partial cds Length = 560 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 343 ccccacgtctggccccacgagttcttggcgatccagtactc 383 |||||| ||| ||||||||||||| |||||||||||||||| Sbjct: 429 ccccacttctcgccccacgagttcctggcgatccagtactc 389
>ref|NM_183998.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1029 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 343 ccccacgtctggccccacgagttcttggcgatccagtact 382 |||||||||| ||||||||||||||||||| |||||||| Sbjct: 938 ccccacgtctttccccacgagttcttggcgacccagtact 899
>dbj|AP003852.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0440D10 Length = 144340 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 343 ccccacgtctggccccacgagttcttggcgatccagtact 382 |||||||||| ||||||||||||||||||| |||||||| Sbjct: 63698 ccccacgtctttccccacgagttcttggcgacccagtact 63659 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 357 ccacgagttcttggcgatccagtact 382 |||||||||||||||||||||||||| Sbjct: 80617 ccacgagttcttggcgatccagtact 80592 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 357 ccacgagttcttggcgatccagtact 382 |||||||||||||||||||||||||| Sbjct: 58488 ccacgagttcttggcgatccagtact 58513 Score = 48.1 bits (24), Expect = 0.036 Identities = 36/40 (90%) Strand = Plus / Plus Query: 343 ccccacgtctggccccacgagttcttggcgatccagtact 382 |||||||||| ||||||||||||||||| | |||||||| Sbjct: 68365 ccccacgtcttaccccacgagttcttggccagccagtact 68404
>gb|AY110841.1| Zea mays CL908_1 mRNA sequence Length = 916 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 337 ttctggccccacgtctggccccacgagttcttggcgatccagta 380 |||| ||||||| ||| |||||||||||||||| |||||||||| Sbjct: 637 ttctcgccccacttctcgccccacgagttcttgacgatccagta 594
>gb|M95060.1|MZEORFA Zea mays putative thiol protease homolog mRNA, partial cds Length = 171 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 337 ttctggccccacgtctggccccacgagttcttggcgatccagta 380 |||| ||||||| ||| |||||||||||||||| |||||||||| Sbjct: 112 ttctcgccccacttctcgccccacgagttcttgacgatccagta 69
>ref|NM_184003.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1086 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 357 ccacgagttcttggcgatccagtact 382 |||||||||||||||||||||||||| Sbjct: 981 ccacgagttcttggcgatccagtact 956
>ref|NM_183997.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1086 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 357 ccacgagttcttggcgatccagtact 382 |||||||||||||||||||||||||| Sbjct: 981 ccacgagttcttggcgatccagtact 956
>ref|NM_183860.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1104 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 357 ccacgagttcttggcgatccagtact 382 |||||||||||||||||||||||||| Sbjct: 999 ccacgagttcttggcgatccagtact 974
>ref|XM_463580.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1116 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 354 gccccacgagttcttggcgatccagtactc 383 |||||||||||||||| ||||||||||||| Sbjct: 960 gccccacgagttcttgacgatccagtactc 931
>dbj|AP003380.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0497A05 Length = 130919 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 354 gccccacgagttcttggcgatccagtactc 383 |||||||||||||||| ||||||||||||| Sbjct: 50139 gccccacgagttcttgacgatccagtactc 50110
>dbj|AP006531.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1417F08 Length = 155536 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 354 gccccacgagttcttggcgatccagtactc 383 |||||||||||||||| ||||||||||||| Sbjct: 70711 gccccacgagttcttgacgatccagtactc 70682
>dbj|AP003764.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1051E10 Length = 207782 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 357 ccacgagttcttggcgatccagtact 382 |||||||||||||||||||||||||| Sbjct: 3516 ccacgagttcttggcgatccagtact 3491
>gb|AF099203.1|AF099203 Oryza sativa cysteine endopeptidase precursor (EP3A) gene, complete cds Length = 2588 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 354 gccccacgagttcttggcgatccagtactc 383 |||||||||||||||| ||||||||||||| Sbjct: 1924 gccccacgagttcttgacgatccagtactc 1895
>dbj|D76415.1| Rice seedling mRNA for cysteine proteinase, complete cds Length = 1429 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 354 gccccacgagttcttggcgatccagtactc 383 |||||||||||||||| ||||||||||||| Sbjct: 970 gccccacgagttcttgacgatccagtactc 941
>dbj|AB004819.1| Oryza sativa Rep1 gene for cysteine endopeptidase, complete cds Length = 2544 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 354 gccccacgagttcttggcgatccagtactc 383 |||||||||||||||| ||||||||||||| Sbjct: 1886 gccccacgagttcttgacgatccagtactc 1857
>gb|AC145324.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0026D03 map near S2137, complete sequence Length = 115141 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 354 gccccacgagttcttggcgatccagtact 382 |||||||||||||||| |||||||||||| Sbjct: 34062 gccccacgagttcttgacgatccagtact 34034
>emb|CT025688.6| Mouse DNA sequence from clone RP24-310A8 on chromosome 9, complete sequence Length = 233365 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 76 cacacacatatatatagtaacaata 100 ||||||||||||||||||||||||| Sbjct: 186282 cacacacatatatatagtaacaata 186258
>emb|X80876.1|OSCYSPRO O.sativa mRNA for cysteine protease Length = 1440 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 354 gccccacgagttcttggcgatccagtact 382 |||||||||||||||| |||||||||||| Sbjct: 1074 gccccacgagttcttgacgatccagtact 1046
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 354 gccccacgagttcttggcgatccagtact 382 |||||||||||||||| |||||||||||| Sbjct: 8298338 gccccacgagttcttgacgatccagtact 8298366 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 488 agccgctcccgtcgatctggacgg 511 ||||||||| |||||||||||||| Sbjct: 7706990 agccgctccggtcgatctggacgg 7707013
>dbj|AK071495.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023099K03, full insert sequence Length = 1511 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 354 gccccacgagttcttggcgatccagtact 382 |||||||||||||||| |||||||||||| Sbjct: 1080 gccccacgagttcttgacgatccagtact 1052
>dbj|AB004648.1| Oryza sativa (japonica cultivar-group) RepA gene for cysteine endopeptidase, complete cds Length = 3836 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 354 gccccacgagttcttggcgatccagtact 382 |||||||||||||||| |||||||||||| Sbjct: 2596 gccccacgagttcttgacgatccagtact 2568
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 354 gccccacgagttcttggcgatccagtact 382 |||||||||||||||| |||||||||||| Sbjct: 8369101 gccccacgagttcttgacgatccagtact 8369129 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 488 agccgctcccgtcgatctggacgg 511 ||||||||| |||||||||||||| Sbjct: 7777077 agccgctccggtcgatctggacgg 7777100
>ref|NM_184000.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1026 Score = 48.1 bits (24), Expect = 0.036 Identities = 36/40 (90%) Strand = Plus / Minus Query: 343 ccccacgtctggccccacgagttcttggcgatccagtact 382 |||||||||| ||||||||||||||||| | |||||||| Sbjct: 935 ccccacgtcttaccccacgagttcttggccagccagtact 896
>gb|AY144442.1| Sorghum bicolor BAC 95A23/98N8.1 Rph region, partial sequence Length = 268433 Score = 48.1 bits (24), Expect = 0.036 Identities = 27/28 (96%) Strand = Plus / Minus Query: 355 ccccacgagttcttggcgatccagtact 382 ||||||||||||||| |||||||||||| Sbjct: 152882 ccccacgagttcttgacgatccagtact 152855
>gb|AY109437.1| Zea mays CL903_-1 mRNA sequence Length = 1664 Score = 48.1 bits (24), Expect = 0.036 Identities = 27/28 (96%) Strand = Plus / Minus Query: 353 ggccccacgagttcttggcgatccagta 380 ||||||||||||||||| |||||||||| Sbjct: 1052 ggccccacgagttcttgacgatccagta 1025
>ref|XM_346301.2| PREDICTED: Rattus norvegicus similar to ankyrin repeat and SOCS box-containing protein 9 (LOC367785), mRNA Length = 1137 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 475 ttctgcagcacggagccgctccc 497 ||||||||||||||||||||||| Sbjct: 524 ttctgcagcacggagccgctccc 546
>dbj|AB091669.1| Pandalus borealis PbCys mRNA for crustapain, complete cds Length = 1242 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 355 ccccacgagttcttggcgatccagtactcttctcc 389 ||||||||||||||| |||||||||| ||| |||| Sbjct: 890 ccccacgagttcttgacgatccagtaatctcctcc 856
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Plus Query: 271 ccgtacatggccatgccacacagccc 296 ||||||||||| |||||||||||||| Sbjct: 22154171 ccgtacatggcaatgccacacagccc 22154196 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 355 ccccacgagttcttggcgatccagtact 382 |||||||||||||| |||||||||||| Sbjct: 22126325 ccccacgagttcttaacgatccagtact 22126352 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 355 ccccacgagttcttggcgatccagtact 382 ||||||||||||||| ||||||||||| Sbjct: 22050555 ccccacgagttcttgatgatccagtact 22050582 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 355 ccccacgagttcttggcgatccagtact 382 |||||||||||||| |||||||||||| Sbjct: 18948275 ccccacgagttcttcacgatccagtact 18948302
>dbj|AP006170.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0042B15 Length = 157981 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Plus Query: 271 ccgtacatggccatgccacacagccc 296 ||||||||||| |||||||||||||| Sbjct: 75664 ccgtacatggcaatgccacacagccc 75689 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 355 ccccacgagttcttggcgatccagtact 382 |||||||||||||| |||||||||||| Sbjct: 47818 ccccacgagttcttaacgatccagtact 47845
>ref|XM_507329.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1150_A11.17 mRNA Length = 1437 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 354 gccccacgagttcttggcgatccagtact 382 ||||||||||||| || |||||||||||| Sbjct: 1041 gccccacgagttcctgacgatccagtact 1013
>ref|XM_483741.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1437 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 354 gccccacgagttcttggcgatccagtact 382 ||||||||||||| || |||||||||||| Sbjct: 1041 gccccacgagttcctgacgatccagtact 1013
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 525 gagcacggccagcgccagcgc 545 ||||||||||||||||||||| Sbjct: 2787899 gagcacggccagcgccagcgc 2787919
>gb|DQ079995.1| Drosophila simulans male accessory gland protein (CG4847) mRNA, partial cds Length = 1086 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 356 cccacgagttcttggcgatccagta 380 |||||||||||||| |||||||||| Sbjct: 997 cccacgagttcttgacgatccagta 973
>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence Length = 3363523 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 538 gccagcgcgtcctcgttgctc 558 ||||||||||||||||||||| Sbjct: 1399381 gccagcgcgtcctcgttgctc 1399401
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 593 cgatgcgtcgggcggcgtcgt 613 ||||||||||||||||||||| Sbjct: 4031783 cgatgcgtcgggcggcgtcgt 4031763
>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome Length = 4501104 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 579 gccggtgatcttgccgatgcg 599 ||||||||||||||||||||| Sbjct: 408098 gccggtgatcttgccgatgcg 408078
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 579 gccggtgatcttgccgatgcg 599 ||||||||||||||||||||| Sbjct: 3398019 gccggtgatcttgccgatgcg 3397999
>emb|BX640447.1| Bordetella bronchiseptica strain RB50, complete genome; segment 11/16 Length = 349442 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 579 gccggtgatcttgccgatgcg 599 ||||||||||||||||||||| Sbjct: 190291 gccggtgatcttgccgatgcg 190311
>emb|BX640442.1| Bordetella bronchiseptica strain RB50, complete genome; segment 6/16 Length = 349876 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 526 agcacggccagcgccagcgcg 546 ||||||||||||||||||||| Sbjct: 167286 agcacggccagcgccagcgcg 167306
>emb|BX640430.1| Bordetella parapertussis strain 12822, complete genome; segment 8/14 Length = 348014 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 526 agcacggccagcgccagcgcg 546 ||||||||||||||||||||| Sbjct: 79286 agcacggccagcgccagcgcg 79306
>emb|BX640428.1| Bordetella parapertussis strain 12822, complete genome; segment 6/14 Length = 348525 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 579 gccggtgatcttgccgatgcg 599 ||||||||||||||||||||| Sbjct: 47926 gccggtgatcttgccgatgcg 47906
>emb|BX640419.1| Bordetella pertussis strain Tohama I, complete genome; segment 9/12 Length = 349672 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 579 gccggtgatcttgccgatgcg 599 ||||||||||||||||||||| Sbjct: 59662 gccggtgatcttgccgatgcg 59682
>emb|AJ428571.1|AEV428571 Azoarcus evansii partial padR gene, padA gene, padB gene, padC gene, padD gene, padE gene, padF gene, padG gene, padH gene, padI gene, padJ gene, ORFA, ORFB and ORFC Length = 16922 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 579 gccggtgatcttgccgatgcg 599 ||||||||||||||||||||| Sbjct: 12165 gccggtgatcttgccgatgcg 12145
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 354 gccccacgagttcttggcgatccagtact 382 ||||||||||||| || |||||||||||| Sbjct: 27868939 gccccacgagttcctgacgatccagtact 27868911
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 532 gccagcgccagcgcgtcctcg 552 ||||||||||||||||||||| Sbjct: 2818876 gccagcgccagcgcgtcctcg 2818896
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 525 gagcacggccagcgccagcgc 545 ||||||||||||||||||||| Sbjct: 866198 gagcacggccagcgccagcgc 866178
>dbj|AP003928.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1150_A11 Length = 142010 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 354 gccccacgagttcttggcgatccagtact 382 ||||||||||||| || |||||||||||| Sbjct: 77017 gccccacgagttcctgacgatccagtact 76989
>ref|XM_312033.2| Anopheles gambiae str. PEST ENSANGP00000022503 (ENSANGG00000016224), partial mRNA Length = 880 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 353 ggccccacgagttcttggcgatccagtac 381 ||||||||||||||||| |||||||||| Sbjct: 733 ggccccacgagttcttgatgatccagtac 705
>ref|XM_312034.2| Anopheles gambiae str. PEST ENSANGP00000018713 (ENSANGG00000016224), partial mRNA Length = 1636 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 353 ggccccacgagttcttggcgatccagtac 381 ||||||||||||||||| |||||||||| Sbjct: 1489 ggccccacgagttcttgatgatccagtac 1461
>dbj|AK105612.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-B06, full insert sequence Length = 1351 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 354 gccccacgagttcttggcgatccagtact 382 ||||||||||||| || |||||||||||| Sbjct: 955 gccccacgagttcctgacgatccagtact 927
>dbj|AK099308.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023144C09, full insert sequence Length = 1437 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 354 gccccacgagttcttggcgatccagtact 382 ||||||||||||| || |||||||||||| Sbjct: 1041 gccccacgagttcctgacgatccagtact 1013
>dbj|AK072235.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023001J24, full insert sequence Length = 1437 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 354 gccccacgagttcttggcgatccagtact 382 ||||||||||||| || |||||||||||| Sbjct: 1041 gccccacgagttcctgacgatccagtact 1013
>ref|NM_105073.2| Arabidopsis thaliana WRKY56; transcription factor AT1G64000 (WRKY56) mRNA, complete cds Length = 888 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 76 cacacacatatatatagtaa 95 |||||||||||||||||||| Sbjct: 65 cacacacatatatatagtaa 84
>gb|AC165230.12| Mus musculus chromosome 1, clone RP23-65C14, complete sequence Length = 174156 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 76 cacacacatatatatagtaa 95 |||||||||||||||||||| Sbjct: 158158 cacacacatatatatagtaa 158177
>ref|XM_528595.1| PREDICTED: Pan troglodytes similar to Olfactory receptor 13J1 (LOC473225), mRNA Length = 1014 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 476 tctgcagcacggagccgctc 495 |||||||||||||||||||| Sbjct: 68 tctgcagcacggagccgctc 87
>ref|XM_471773.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1146 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 354 gccccacgagttcttggcgatccagtac 381 |||||||||||||||| |||||||||| Sbjct: 1023 gccccacgagttcttgatgatccagtac 996
>gb|BT016603.1| Zea mays clone Contig436 mRNA sequence Length = 1526 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 395 cggtgaccccgtagccgacc 414 |||||||||||||||||||| Sbjct: 1075 cggtgaccccgtagccgacc 1056
>gb|BT017224.1| Zea mays clone EL01N0302C04.c mRNA sequence Length = 617 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 395 cggtgaccccgtagccgacc 414 |||||||||||||||||||| Sbjct: 187 cggtgaccccgtagccgacc 168
>gb|AF488413.1| Oryza sativa chromosome 6 BAC 134P10, complete sequence Length = 136866 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 76 cacacacatatatatagtaa 95 |||||||||||||||||||| Sbjct: 28661 cacacacatatatatagtaa 28680
>gb|AC138000.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0024M06, complete sequence Length = 51144 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 488 agccgctcccgtcgatctggacgg 511 ||||||||| |||||||||||||| Sbjct: 9277 agccgctccggtcgatctggacgg 9254
>gb|AC135459.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0004P24, complete sequence Length = 137721 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 488 agccgctcccgtcgatctggacgg 511 ||||||||| |||||||||||||| Sbjct: 109965 agccgctccggtcgatctggacgg 109942
>gb|AY491681.1| Triticum monococcum DV92 BAC 109N23, complete sequence Length = 101101 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 46 aagcatacacatcataatat 65 |||||||||||||||||||| Sbjct: 19416 aagcatacacatcataatat 19397
>gb|AF117829.3| Homo sapiens chromosome 8 multiple clones map q21.3, complete sequence Length = 320187 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 195 aatgcatcttattttaatag 214 |||||||||||||||||||| Sbjct: 110251 aatgcatcttattttaatag 110270
>emb|CT025848.6| Mouse DNA sequence from clone RP24-326K2 on chromosome 17, complete sequence Length = 172896 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 19 ttacatttcaaaaatacaca 38 |||||||||||||||||||| Sbjct: 15354 ttacatttcaaaaatacaca 15335
>ref|XM_757119.1| Ustilago maydis 521 hypothetical protein (UM06065.1) partial mRNA Length = 2055 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 370 gcgatccagtactcttctcc 389 |||||||||||||||||||| Sbjct: 551 gcgatccagtactcttctcc 532
>ref|XM_848249.1| PREDICTED: Canis familiaris similar to TSPY-like 5 (LOC610706), mRNA Length = 1071 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 524 tgagcacggccagcgccagc 543 |||||||||||||||||||| Sbjct: 948 tgagcacggccagcgccagc 929
>gb|AC100724.10| Mus musculus chromosome 17, clone RP24-120E11, complete sequence Length = 179334 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 ttacatttcaaaaatacaca 38 |||||||||||||||||||| Sbjct: 94905 ttacatttcaaaaatacaca 94924
>emb|AL591785.1|SME591785 Sinorhizobium meliloti 1021 complete chromosome; segment 4/12 Length = 286550 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 577 acgccggtgatcttgccgat 596 |||||||||||||||||||| Sbjct: 272680 acgccggtgatcttgccgat 272699
>emb|AJ245480.1|BNA245480 Brassica napus subsp. napus AtPP-A14 gene for putative S-adenosyl methionine salycilic acid carboxyl methionyl transferase and slg gene for S-locus glycoprotein, cultivar T2 Length = 87844 Score = 40.1 bits (20), Expect = 8.7 Identities = 22/23 (95%) Strand = Plus / Plus Query: 69 tggnaaccacacacatatatata 91 ||| ||||||||||||||||||| Sbjct: 78135 tggaaaccacacacatatatata 78157
>ref|XM_536212.2| PREDICTED: Canis familiaris similar to Cathepsin H precursor (LOC479065), mRNA Length = 1206 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 353 ggccccacgagttcttggcgatccagta 380 |||||||||||||||| |||||||||| Sbjct: 820 ggccccacgagttcttcacgatccagta 793
>emb|BX842679.19| Human DNA sequence from clone XXyac-155B6 on chromosome 1 Contains a novel gene and a phosphodiesterase 4D interacting protein (myomegalin) (PDE4DIP) pseudogene, a profilin 1 (PFN1) pseudogene, the gene for a novel protein similar to chromosome 19 open reading frame 27 (C19orf27) and two novel genes, complete sequence Length = 163898 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 76 cacacacatatatatagtaa 95 |||||||||||||||||||| Sbjct: 28875 cacacacatatatatagtaa 28856
>emb|AL646103.3| Human DNA sequence from clone RP11-165L6 on chromosome 13, complete sequence Length = 56712 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 76 cacacacatatatatagtaa 95 |||||||||||||||||||| Sbjct: 16920 cacacacatatatatagtaa 16901
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 531 ggccagcgccagcgcgtcct 550 |||||||||||||||||||| Sbjct: 2231910 ggccagcgccagcgcgtcct 2231891
>emb|AL356004.9| Human DNA sequence from clone RP11-94I2 on chromosome 1 Contains the 3' end of the gene for a novel protein similar to putative G-protein coupled receptor SH120, the gene for a novel protein similar to PDZ domain containing 1 PDZK1, a novel gene, a phosphodiesterase 4D interacting protein (myomegalin) (PDE4DIP) pseudogene and three CpG islands, complete sequence Length = 166098 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 76 cacacacatatatatagtaa 95 |||||||||||||||||||| Sbjct: 127192 cacacacatatatatagtaa 127173
>emb|AL133348.8| Human DNA sequence from clone RP1-79P11 on chromosome Xq21.32-22.1 Contains the gene for X-linked protein and a CpG island, complete sequence Length = 40584 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 76 cacacacatatatatagtaa 95 |||||||||||||||||||| Sbjct: 30404 cacacacatatatatagtaa 30385
>emb|X62163.1|LMLCPA L.mexicana LCPa mRNA for cysteine proteinase Length = 2355 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 354 gccccacgagttcttggcgatccagtac 381 ||||||||||||||| ||||||||||| Sbjct: 2163 gccccacgagttcttcacgatccagtac 2136
>emb|AL663007.2|OSJN00206 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0054B09, complete sequence Length = 146506 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 354 gccccacgagttcttggcgatccagtac 381 |||||||||||||||| |||||||||| Sbjct: 21955 gccccacgagttcttgatgatccagtac 21928
>emb|AL607000.3|OSJN00132 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0089B03, complete sequence Length = 130910 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 254 acatgacgggataagcaccg 273 |||||||||||||||||||| Sbjct: 130625 acatgacgggataagcaccg 130644
>emb|AJ420285.1|LIN420285 Leishmania infantum cpa gene for cysteine proteinase Length = 1665 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 354 gccccacgagttcttggcgatccagtac 381 ||||||||||||||| ||||||||||| Sbjct: 1026 gccccacgagttcttcacgatccagtac 999
>emb|AJ130942.1|LMA130942 Leishmania major (MRHO/IR/75/ER), amastigote cpa gene encoding cysteine proteinase A Length = 697 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 354 gccccacgagttcttggcgatccagtac 381 ||||||||||||||| ||||||||||| Sbjct: 562 gccccacgagttcttcacgatccagtac 535
>emb|CR857593.1| Pongo pygmaeus mRNA; cDNA DKFZp469H1115 (from clone DKFZp469H1115) Length = 4699 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 526 agcacggccagcgccagcgc 545 |||||||||||||||||||| Sbjct: 139 agcacggccagcgccagcgc 158
>dbj|AB190354.1| Brassica rapa BrSRK-f2, BrSP11-f2 genes, complete cds Length = 38542 Score = 40.1 bits (20), Expect = 8.7 Identities = 22/23 (95%) Strand = Plus / Minus Query: 69 tggnaaccacacacatatatata 91 ||| ||||||||||||||||||| Sbjct: 9162 tggaaaccacacacatatatata 9140
>dbj|AK125157.1| Homo sapiens cDNA FLJ43167 fis, clone FCBBF3004041 Length = 2595 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 526 agcacggccagcgccagcgc 545 |||||||||||||||||||| Sbjct: 171 agcacggccagcgccagcgc 190
>gb|AC079177.21| Homo sapiens Xp BAC RP11-147B14 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 155533 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 198 gcatcttattttaatagcacatta 221 |||| ||||||||||||||||||| Sbjct: 51108 gcattttattttaatagcacatta 51085
>gb|AF309687.1|AF309687 Leishmania donovani cysteine protease gene, complete cds Length = 1062 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 354 gccccacgagttcttggcgatccagtac 381 ||||||||||||||| ||||||||||| Sbjct: 933 gccccacgagttcttcacgatccagtac 906
>gb|AF538038.1| Leishmania mexicana amazonensis cysteine proteinase (cys1) gene, complete cds Length = 1065 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 354 gccccacgagttcttggcgatccagtac 381 ||||||||||||||| ||||||||||| Sbjct: 936 gccccacgagttcttcacgatccagtac 909
>gb|AY141759.1| Leishmania mexicana amazonensis clone 2A1 cysteine proteinase mRNA, complete cds Length = 1568 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 354 gccccacgagttcttggcgatccagtac 381 ||||||||||||||| ||||||||||| Sbjct: 984 gccccacgagttcttcacgatccagtac 957
>gb|AY141758.1| Leishmania mexicana amazonensis clone 3A4 cysteine proteinase mRNA, complete cds Length = 2431 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 354 gccccacgagttcttggcgatccagtac 381 ||||||||||||||| ||||||||||| Sbjct: 1102 gccccacgagttcttcacgatccagtac 1075
>gb|AC145297.3| Mus musculus BAC clone RP24-196O7 from chromosome 10, complete sequence Length = 172595 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 76 cacacacatatatatagtaa 95 |||||||||||||||||||| Sbjct: 83801 cacacacatatatatagtaa 83820
>gb|AY028171.1| Leishmania donovani extra chromosome XC290, partial sequence Length = 44273 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 354 gccccacgagttcttggcgatccagtac 381 ||||||||||||||| ||||||||||| Sbjct: 27756 gccccacgagttcttcacgatccagtac 27729
>gb|AF004593.2|AF004593 Leishmania donovani chagasi promastigote-specific cysteine protease (ldccys2) gene, complete cds Length = 2684 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 354 gccccacgagttcttggcgatccagtac 381 ||||||||||||||| ||||||||||| Sbjct: 1291 gccccacgagttcttcacgatccagtac 1264
>emb|BX005236.16| Mouse DNA sequence from clone RP23-254A23 on chromosome X, complete sequence Length = 122633 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 76 cacacacatatatatagtaa 95 |||||||||||||||||||| Sbjct: 76722 cacacacatatatatagtaa 76741
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 254 acatgacgggataagcaccg 273 |||||||||||||||||||| Sbjct: 18662759 acatgacgggataagcaccg 18662778 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 354 gccccacgagttcttggcgatccagtac 381 |||||||||||||||| |||||||||| Sbjct: 14184189 gccccacgagttcttgatgatccagtac 14184162
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 76 cacacacatatatatagtaa 95 |||||||||||||||||||| Sbjct: 1708506 cacacacatatatatagtaa 1708525
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 78 cacacatatatatagtaaca 97 |||||||||||||||||||| Sbjct: 21018144 cacacatatatatagtaaca 21018163
>emb|AL662977.3|OSJN00176 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0072D21, complete sequence Length = 160456 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 254 acatgacgggataagcaccg 273 |||||||||||||||||||| Sbjct: 11897 acatgacgggataagcaccg 11916
>dbj|AB186750.1| Sphingomonas paucimobilis orf1, orf2, ligM, metF, ligH genes for putative formaldehyde dehydrogenase, putative alkyl salicylate esterase, vanillate/3-O-methylgallate O-demethylase, 5,10-methylenetetrahydrofolate reductase, 10-formyltetrahydrofolate synthetase, partial and complete cds Length = 9491 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 534 cagcgccagcgcgtcctcgt 553 |||||||||||||||||||| Sbjct: 4155 cagcgccagcgcgtcctcgt 4136
>gb|AC154249.2| Mus musculus BAC clone RP24-188L2 from chromosome 14, complete sequence Length = 149132 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 82 catatatatagtaacaatat 101 |||||||||||||||||||| Sbjct: 133767 catatatatagtaacaatat 133786
>gb|AC007764.2|AC007764 Genomic sequence for Arabidopsis thaliana BAC F22C12 from chromosome I, complete sequence Length = 111222 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 76 cacacacatatatatagtaa 95 |||||||||||||||||||| Sbjct: 103526 cacacacatatatatagtaa 103507
>gb|AY088461.1| Arabidopsis thaliana clone 6858 mRNA, complete sequence Length = 888 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 76 cacacacatatatatagtaa 95 |||||||||||||||||||| Sbjct: 65 cacacacatatatatagtaa 84
>gb|AC018730.8| Homo sapiens BAC clone RP11-13J10 from 2, complete sequence Length = 154728 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 526 agcacggccagcgccagcgc 545 |||||||||||||||||||| Sbjct: 79442 agcacggccagcgccagcgc 79461
>dbj|AP003104.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0038J17 Length = 180186 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 191 cattaatgcatcttatttta 210 |||||||||||||||||||| Sbjct: 5887 cattaatgcatcttatttta 5868
>dbj|AP002092.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0031E09 Length = 176349 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 191 cattaatgcatcttatttta 210 |||||||||||||||||||| Sbjct: 168046 cattaatgcatcttatttta 168027
>dbj|AP000559.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, clone:P0493C11 Length = 143113 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 76 cacacacatatatatagtaa 95 |||||||||||||||||||| Sbjct: 111677 cacacacatatatatagtaa 111696
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 530 cggccagcgccagcgcgtcc 549 |||||||||||||||||||| Sbjct: 4497676 cggccagcgccagcgcgtcc 4497657 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 593 cgatgcgtcgggcggcgtcg 612 |||||||||||||||||||| Sbjct: 2388963 cgatgcgtcgggcggcgtcg 2388944
>dbj|AP002542.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0679C08 Length = 156266 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 76 cacacacatatatatagtaa 95 |||||||||||||||||||| Sbjct: 33655 cacacacatatatatagtaa 33674
>dbj|AP005396.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0635G10 Length = 146728 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 355 ccccacgagttcttggcgatccagtact 382 ||||||||||||||| ||||||||||| Sbjct: 92619 ccccacgagttcttgatgatccagtact 92646
>dbj|AP004876.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0470G10 Length = 145419 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 78 cacacatatatatagtaaca 97 |||||||||||||||||||| Sbjct: 141616 cacacatatatatagtaaca 141635
>emb|BX005026.10| Zebrafish DNA sequence from clone DKEY-11J5, complete sequence Length = 154034 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 caaaaatacacacctgacaa 46 |||||||||||||||||||| Sbjct: 129623 caaaaatacacacctgacaa 129604
>dbj|AP004017.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1008_F08 Length = 105979 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 78 cacacatatatatagtaaca 97 |||||||||||||||||||| Sbjct: 19889 cacacatatatatagtaaca 19908
>dbj|AK121305.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023111H18, full insert sequence Length = 1981 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 354 gccccacgagttcttggcgatccagtac 381 |||||||||||||||| |||||||||| Sbjct: 1591 gccccacgagttcttgatgatccagtac 1564
>dbj|AK108733.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-150-D05, full insert sequence Length = 904 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 355 ccccacgagttcttggcgatccagtact 382 ||||||||||||||| ||||||||||| Sbjct: 602 ccccacgagttcttgatgatccagtact 575
>gb|AC004459.1|AC004459 Homo sapiens BAC clone CTA-273G1 from 8q21, complete sequence Length = 41798 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 195 aatgcatcttattttaatag 214 |||||||||||||||||||| Sbjct: 12236 aatgcatcttattttaatag 12255
>dbj|AK099197.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023120K15, full insert sequence Length = 1290 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 355 ccccacgagttcttggcgatccagtact 382 |||||||||||||| |||||||||||| Sbjct: 1000 ccccacgagttcttcacgatccagtact 973
>dbj|AK072767.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023138P12, full insert sequence Length = 1322 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 355 ccccacgagttcttggcgatccagtact 382 |||||||||||||| |||||||||||| Sbjct: 1009 ccccacgagttcttcacgatccagtact 982
>gb|AC133952.4| Mus musculus BAC clone RP23-114H2 from 1, complete sequence Length = 236382 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 78 cacacatatatatagtaaca 97 |||||||||||||||||||| Sbjct: 123312 cacacatatatatagtaaca 123331
>gb|AC122122.14| Mus musculus chromosome 1, clone RP23-15D21, complete sequence Length = 204416 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 76 cacacacatatatatagtaa 95 |||||||||||||||||||| Sbjct: 46217 cacacacatatatatagtaa 46236
>emb|BX470096.16| Zebrafish DNA sequence from clone DKEY-163O15 in linkage group 19, complete sequence Length = 111728 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 76 cacacacatatatatagtaa 95 |||||||||||||||||||| Sbjct: 37813 cacacacatatatatagtaa 37832
>gb|AY112469.1| Zea mays CL13598_-2 mRNA sequence Length = 606 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 395 cggtgaccccgtagccgacc 414 |||||||||||||||||||| Sbjct: 371 cggtgaccccgtagccgacc 390
>gb|AY110047.1| Zea mays CL878_1 mRNA sequence Length = 1403 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 359 acgagttcttggcgatccagtact 382 ||||||||||| |||||||||||| Sbjct: 1035 acgagttcttgacgatccagtact 1012
>gb|AY104208.1| Zea mays PCO086864 mRNA sequence Length = 941 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 525 gagcacggccagcgccagcg 544 |||||||||||||||||||| Sbjct: 224 gagcacggccagcgccagcg 205
>dbj|AB097116.1| Brassica rapa SRK-60, SLG-60 genes for S receptor kinase, S-locus glycoprotein, partial cds Length = 86379 Score = 40.1 bits (20), Expect = 8.7 Identities = 22/23 (95%) Strand = Plus / Plus Query: 69 tggnaaccacacacatatatata 91 ||| ||||||||||||||||||| Sbjct: 67571 tggaaaccacacacatatatata 67593
>gb|AC138245.11| Mus musculus chromosome 17, clone RP23-75D10, complete sequence Length = 216692 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 234 accatgatataatactaactacat 257 ||||| |||||||||||||||||| Sbjct: 96723 accataatataatactaactacat 96700
>emb|BX538329.1|HSM806598 Homo sapiens mRNA; cDNA DKFZp686L14188 (from clone DKFZp686L14188) Length = 3819 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 195 aatgcatcttattttaatag 214 |||||||||||||||||||| Sbjct: 293 aatgcatcttattttaatag 274
>emb|CR848667.23| Zebrafish DNA sequence from clone CH211-257P13 in linkage group 15, complete sequence Length = 157566 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 tatatatagtaacaatatcg 103 |||||||||||||||||||| Sbjct: 134785 tatatatagtaacaatatcg 134804
>gb|AC135634.4| Mus musculus BAC clone RP23-121I20 from 9, complete sequence Length = 209177 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 76 cacacacatatatatagtaa 95 |||||||||||||||||||| Sbjct: 71522 cacacacatatatatagtaa 71541
>gb|L29168.1|LEICYSTPRO Leishmania pifanoi cysteine proteinase gene, complete cds Length = 1377 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 354 gccccacgagttcttggcgatccagtac 381 ||||||||||||||| ||||||||||| Sbjct: 1136 gccccacgagttcttcacgatccagtac 1109
>gb|L38514.1|TRBRANGB Trypanosoma rangeli (clone 3) rangelipain gene, 3' end of cds and 5' end of cds Length = 1898 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 354 gccccacgagttcttggcgatccagtac 381 |||||||||||||||| |||||||||| Sbjct: 138 gccccacgagttcttgatgatccagtac 111
>gb|L38513.1|TRBRANGA Trypanosoma rangeli (clone 2) rangelipain gene, 3' end of cds and 5' end of cds Length = 1905 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 354 gccccacgagttcttggcgatccagtac 381 |||||||||||||||| |||||||||| Sbjct: 138 gccccacgagttcttgatgatccagtac 111
>gb|L38512.1|TRBRANG Trypanosoma rangeli (clone 1) rangelipain gene, 3' end of cds and 5' end of cds Length = 1902 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 354 gccccacgagttcttggcgatccagtac 381 |||||||||||||||| |||||||||| Sbjct: 138 gccccacgagttcttgatgatccagtac 111
>emb|AL844893.9| Mouse DNA sequence from clone RP23-355H24 on chromosome 2, complete sequence Length = 175570 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 76 cacacacatatatatagtaacaat 99 |||||||||||||||| ||||||| Sbjct: 170354 cacacacatatatatattaacaat 170377
>emb|Z70233.2|HSV870H8 Human DNA sequence from clone GHc-870H8 on chromosome X Contains the BEX1 gene for brain expressed, X-linked 1 protein and a CpG island, complete sequence Length = 36865 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 76 cacacacatatatatagtaa 95 |||||||||||||||||||| Sbjct: 32634 cacacacatatatatagtaa 32615 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,276,143 Number of Sequences: 3902068 Number of extensions: 5276143 Number of successful extensions: 204377 Number of sequences better than 10.0: 142 Number of HSP's better than 10.0 without gapping: 146 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 202311 Number of HSP's gapped (non-prelim): 2064 length of query: 635 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 612 effective length of database: 17,143,297,704 effective search space: 10491698194848 effective search space used: 10491698194848 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)