ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd16g03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK070384.1| Oryza sativa (japonica cultivar-group) cDNA clon... 533 e-148
2dbj|AK109052.1| Oryza sativa (japonica cultivar-group) cDNA clon... 450 e-123
3ref|NM_197081.1| Oryza sativa (japonica cultivar-group) putative... 385 e-103
4gb|AY104455.1| Zea mays PCO091750 mRNA sequence 361 2e-96
5gb|BT017587.1| Zea mays clone EL01N0430C11.c mRNA sequence 337 3e-89
6gb|AC087182.12| Oryza sativa chromosome 10 BAC OSJNBa0029C15 gen... 226 7e-56
7dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 226 7e-56
8dbj|AK106675.1| Oryza sativa (japonica cultivar-group) cDNA clon... 226 7e-56
9gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 226 7e-56
10ref|NM_101594.1| Arabidopsis thaliana catalytic AT1G17330 mRNA, ... 62 2e-06
11gb|BT009671.1| Arabidopsis thaliana At1g17330 mRNA, complete cds 62 2e-06
12emb|BX818451.1|CNS0AE1F Arabidopsis thaliana Full-length cDNA Co... 62 2e-06
13gb|BT002376.1| Arabidopsis thaliana unknown protein (At1g17330) ... 62 2e-06
14gb|AC007843.6|AC007843 Arabidopsis thaliana chromosome I BAC F28... 54 6e-04
15emb|AL591981.1| Listeria monocytogenes strain EGD, complete geno... 48 0.036
16gb|AC152158.10| Medicago truncatula clone mth2-139g10, complete ... 46 0.14
17gb|AC161033.18| Medicago truncatula clone mth2-57g13, complete s... 46 0.14
18emb|CT025602.8| Mouse DNA sequence from clone RP23-458L4 on chro... 44 0.56
19gb|AC132282.3| Mus musculus BAC clone RP24-348O21 from chromosom... 44 0.56
20gb|AE014183.1| Mus musculus piebald deletion region section 11 o... 44 0.56
21gb|AC018755.3|AC018755 Homo sapiens chromosome 19, BAC BC330783 ... 44 0.56
22ref|XM_634007.1| Dictyostelium discoideum hypothetical protein (... 42 2.2
23ref|XM_364293.1| Magnaporthe grisea 70-15 hypothetical protein (... 42 2.2
24gb|AY550908.1| Mus musculus hyperplastic discs protein (Edd) mRN... 42 2.2
25gb|AC113548.22| Mus musculus chromosome 9, clone RP23-268F15, co... 42 2.2
26gb|AC140182.2| Mus musculus BAC clone RP24-349I16 from chromosom... 42 2.2
27ref|XM_984858.1| PREDICTED: Mus musculus E3 ubiquitin protein li... 42 2.2
28ref|XM_912064.2| PREDICTED: Mus musculus E3 ubiquitin protein li... 42 2.2
29ref|XM_898880.2| PREDICTED: Mus musculus E3 ubiquitin protein li... 42 2.2
30ref|XM_898886.2| PREDICTED: Mus musculus E3 ubiquitin protein li... 42 2.2
31ref|XM_898869.2| PREDICTED: Mus musculus E3 ubiquitin protein li... 42 2.2
32ref|XM_196130.7| PREDICTED: Mus musculus E3 ubiquitin protein li... 42 2.2
33gb|AC102358.5| Mus musculus chromosome 8, clone RP23-451H9, comp... 42 2.2
34gb|AC018738.4| Homo sapiens BAC clone RP11-419H23 from 2, comple... 42 2.2
35gb|AC116329.3| Mus musculus BAC clone RP24-290C19 from 5, comple... 42 2.2
36gb|AC113596.8| Mus musculus chromosome 5, clone RP23-374B20, com... 42 2.2
37gb|BC047348.1| Mus musculus E3 ubiquitin protein ligase, HECT do... 42 2.2
38gb|AC012289.12| Homo sapiens chromosome 18, clone RP11-7E6, comp... 42 2.2
39dbj|AK083545.1| Mus musculus 9 days embryo whole body cDNA, RIKE... 42 2.2
40gb|AC004828.2|AC004828 Homo sapiens clone DJ0514A23, complete se... 42 2.2
41emb|CT025919.8| Zebrafish DNA sequence from clone DKEY-199O23 in... 42 2.2
42dbj|AK122398.1| Mus musculus mRNA for mKIAA0896 protein 42 2.2
43emb|CR932980.12| Zebrafish DNA sequence from clone DKEY-81L13 in... 42 2.2
44emb|AL392024.3|CNS06C8K Human chromosome 14 DNA sequence BAC R-1... 42 2.2
45gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 8.7
46gb|AC159238.2| Mus musculus BAC clone RP24-477O8 from chromosome... 40 8.7
47emb|CR376787.10| Zebrafish DNA sequence from clone DKEY-33C9 in ... 40 8.7
48emb|CR352303.12| Zebrafish DNA sequence from clone CH211-157C9 i... 40 8.7
49emb|CR759843.7| Zebrafish DNA sequence from clone DKEYP-82B4 in ... 40 8.7
50gb|AC103453.7| Rattus norvegicus 13 BAC CH230-127N19 (Children's... 40 8.7
51emb|AL645847.15| Mouse DNA sequence from clone RP23-428I5 on chr... 40 8.7
52gb|AC087235.13| Homo sapiens 12 BAC RP11-153K16 (Roswell Park Ca... 40 8.7
53emb|AL954245.1| Pan troglodytes chromosome 22 clone PTB-047B05 m... 40 8.7
54emb|BX897739.8| Zebrafish DNA sequence from clone CH211-160J20 i... 40 8.7
55ref|NM_205110.1| Gallus gallus topoisomerase (DNA) I (TOP1), mRNA 40 8.7
56gb|AC018525.8| Homo sapiens chromosome 8, clone RP11-3J13, compl... 40 8.7
57gb|AC113370.2| Homo sapiens chromosome 5 clone RP11-124O5, compl... 40 8.7
58gb|AC109469.2| Homo sapiens chromosome 5 clone RP11-349F8, compl... 40 8.7
59dbj|AP006716.1| Staphylococcus haemolyticus JCSC1435 DNA, comple... 40 8.7
60gb|AF232689.2| Rat cytomegalovirus Maastricht, complete genome 40 8.7
61gb|AC010595.7| Homo sapiens chromosome 5 clone CTC-480C2, comple... 40 8.7
62gb|AC090567.7| Homo sapiens chromosome 8, clone RP11-18L2, compl... 40 8.7
63gb|AC026700.5| Homo sapiens chromosome 5 clone CTC-534B23, compl... 40 8.7
64dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.7
65dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.7
66gb|AC097367.3| Oryza sativa chromosome 3 BAC OSJNBa0051C19 genom... 40 8.7
67gb|CP000084.1| Candidatus Pelagibacter ubique HTCC1062, complete... 40 8.7
68dbj|AP003726.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.7
69dbj|AP005354.2| Homo sapiens genomic DNA, chromosome 8q23, clone... 40 8.7
70emb|AJ491854.1|OSA491854 Oryza sativa (japonica cultivar-group) ... 40 8.7
71gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome 40 8.7
72emb|Z97338.2|ATFCA3 Arabidopsis thaliana DNA chromosome 4, ESSA ... 40 8.7
73emb|AL161540.2|ATCHRIV40 Arabidopsis thaliana DNA chromosome 4, ... 40 8.7
74emb|AL929165.9| Mouse DNA sequence from clone RP23-446D4 on chro... 40 8.7
75gb|AC140360.4| Mus musculus BAC clone RP24-241G4 from chromosome... 40 8.7
76dbj|AB000407.1| Gallus gallus mRNA for DNA topoisomerase I, comp... 40 8.7
77emb|AJ492242.1|STU492242 Solanum tuberosum DNA for genomic PstI ... 40 8.7 
>dbj|AK070384.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023052E08, full
           insert sequence
          Length = 1010

 Score =  533 bits (269), Expect = e-148
 Identities = 422/473 (89%)
 Strand = Plus / Minus

                                                                       
Query: 131 ctggttggtcaacttcaagccctgccactccactcttcatagaattcagccacaaaagtc 190
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||   |
Sbjct: 761 ctggttggtcaacttcaagctctgccactccactcttcatagaattcagccacaaagtcc 702

                                                                       
Query: 191 tccatgaacttgtgccttttctctgctctctttttcccagcctctgtcttcatcatgtcc 250
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 701 tccatgaacttgtgccttttctctgctctctttttcccggcctctgtcttcatcatgtcc 642

                                                                       
Query: 251 ttcaacttaaaaagcttctcatggaaatgattaattgatgtttgtttctcctccttggac 310
           ||||||||||| ||||||||||||||||||||||||||||| ||||| || |||||||||
Sbjct: 641 ttcaacttaaatagcttctcatggaaatgattaattgatgtctgtttttcatccttggac 582

                                                                       
Query: 311 atgtacttctcctttgacaaattatcccgcggaagtacgttaggatcatgcaatgcactg 370
           ||||| |||||||||||||||||||| ||||| ||||  ||||||||||||||||   | 
Sbjct: 581 atgtatttctcctttgacaaattatcacgcggcagtatcttaggatcatgcaatgtgttt 522

                                                                       
Query: 371 ttcttgctccctccatatgtaaaacatcttgcaacgccaatcgcaccaattgcatccaga 430
           ||||||||||| ||||| ||||||||||||||||  ||||| |||||||||||||| |||
Sbjct: 521 ttcttgctcccaccatacgtaaaacatcttgcaataccaattgcaccaattgcatcaaga 462

                                                                       
Query: 431 cgatctgcatcttgcacgattgcaaactcaagagtggtctctgcattaagcttctttgaa 490
           |||||||||||||| || ||||||||||||||||| | |||  ||  |  ||||||||||
Sbjct: 461 cgatctgcatcttgtacaattgcaaactcaagagtaggctcaacaacagacttctttgaa 402

                                                                       
Query: 491 acctcatttttgaatcccatccctgtaataatggccactatttcctccttctgtccctcc 550
           || ||||||||||||||||||||  |||| || ||||| ||||||||| |||| |||| |
Sbjct: 401 acttcatttttgaatcccatccccttaatgatcgccacaatttcctccctctggccctgc 342

                                                                
Query: 551 tcgagacccacctctccaagaaaccttttgacgatgctcatatcctccgcatt 603
           || ||  |||||||| |||||||||| |  ||||||||||||||||| |||||
Sbjct: 341 tccagttccacctcttcaagaaacctctccacgatgctcatatcctcagcatt 289



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 89  gttggttggccaacttcaagc 109
           |||||||||||||||||||||
Sbjct: 808 gttggttggccaacttcaagc 788
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>dbj|AK109052.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-154-E06, full
           insert sequence
          Length = 1448

 Score =  450 bits (227), Expect = e-123
 Identities = 308/335 (91%)
 Strand = Plus / Minus

                                                                       
Query: 131 ctggttggtcaacttcaagccctgccactccactcttcatagaattcagccacaaaagtc 190
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||   |
Sbjct: 349 ctggttggtcaacttcaagctctgccactccactcttcatagaattcagccacaaagtcc 290

                                                                       
Query: 191 tccatgaacttgtgccttttctctgctctctttttcccagcctctgtcttcatcatgtcc 250
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 289 tccatgaacttgtgccttttctctgctctctttttcccggcctctgtcttcatcatgtcc 230

                                                                       
Query: 251 ttcaacttaaaaagcttctcatggaaatgattaattgatgtttgtttctcctccttggac 310
           ||||||||||| ||||||||||||||||||||||||||||| ||||| || |||||||||
Sbjct: 229 ttcaacttaaatagcttctcatggaaatgattaattgatgtctgtttttcatccttggac 170

                                                                       
Query: 311 atgtacttctcctttgacaaattatcccgcggaagtacgttaggatcatgcaatgcactg 370
           ||||| |||||||||||||||||||| ||||| ||||  ||||||||||||||||   | 
Sbjct: 169 atgtatttctcctttgacaaattatcacgcggcagtatcttaggatcatgcaatgtgttt 110

                                                                       
Query: 371 ttcttgctccctccatatgtaaaacatcttgcaacgccaatcgcaccaattgcatccaga 430
           ||||||||||| ||||| ||||||||||||||||  ||||| |||||||||||||| |||
Sbjct: 109 ttcttgctcccaccatacgtaaaacatcttgcaataccaattgcaccaattgcatcaaga 50

                                              
Query: 431 cgatctgcatcttgcacgattgcaaactcaagagt 465
           |||||| ||||||| || |||||||||||||||||
Sbjct: 49  cgatctacatcttgtacaattgcaaactcaagagt 15



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 89  gttggttggccaacttcaagc 109
           |||||||||||||||||||||
Sbjct: 396 gttggttggccaacttcaagc 376
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>ref|NM_197081.1| Oryza sativa (japonica cultivar-group) putative HD domain protein
           (OSJNBa0029C15.4), mRNA
          Length = 1131

 Score =  385 bits (194), Expect = e-103
 Identities = 254/274 (92%)
 Strand = Plus / Minus

                                                                       
Query: 131 ctggttggtcaacttcaagccctgccactccactcttcatagaattcagccacaaaagtc 190
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||   |
Sbjct: 776 ctggttggtcaacttcaagctctgccactccactcttcatagaattcagccacaaagtcc 717

                                                                       
Query: 191 tccatgaacttgtgccttttctctgctctctttttcccagcctctgtcttcatcatgtcc 250
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 716 tccatgaacttgtgccttttctctgctctctttttcccggcctctgtcttcatcatgtcc 657

                                                                       
Query: 251 ttcaacttaaaaagcttctcatggaaatgattaattgatgtttgtttctcctccttggac 310
           ||||||||||| ||||||||||||||||||||||||||||| ||||| || |||||||||
Sbjct: 656 ttcaacttaaatagcttctcatggaaatgattaattgatgtctgtttttcatccttggac 597

                                                                       
Query: 311 atgtacttctcctttgacaaattatcccgcggaagtacgttaggatcatgcaatgcactg 370
           ||||| |||||||||||||||||||| ||||| ||||  ||||||||||||||||   | 
Sbjct: 596 atgtatttctcctttgacaaattatcacgcggcagtatcttaggatcatgcaatgtgttt 537

                                             
Query: 371 ttcttgctccctccatatgtaaaacatcttgcaa 404
           ||||||||||| ||||| ||||||||||||||||
Sbjct: 536 ttcttgctcccaccatacgtaaaacatcttgcaa 503



 Score =  163 bits (82), Expect = 9e-37
 Identities = 169/198 (85%)
 Strand = Plus / Minus

                                                                       
Query: 406 gccaatcgcaccaattgcatccagacgatctgcatcttgcacgattgcaaactcaagagt 465
           |||||| |||||||||||||| ||||||||||||||||| || |||||||||||||||||
Sbjct: 414 gccaattgcaccaattgcatcaagacgatctgcatcttgtacaattgcaaactcaagagt 355

                                                                       
Query: 466 ggtctctgcattaagcttctttgaaacctcatttttgaatcccatccctgtaataatggc 525
            | |||  ||  |  |||||||||||| ||||||||||||||||||||  |||| || ||
Sbjct: 354 aggctcaacaacagacttctttgaaacttcatttttgaatcccatccccttaatgatcgc 295

                                                                       
Query: 526 cactatttcctccttctgtccctcctcgagacccacctctccaagaaaccttttgacgat 585
           ||| ||||||||| |||| |||| ||| ||  |||||||| |||||||||| |  |||||
Sbjct: 294 cacaatttcctccctctggccctgctccagttccacctcttcaagaaacctctccacgat 235

                             
Query: 586 gctcatatcctccgcatt 603
           |||||||||||| |||||
Sbjct: 234 gctcatatcctcagcatt 217



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 89  gttggttggccaacttcaagc 109
           |||||||||||||||||||||
Sbjct: 823 gttggttggccaacttcaagc 803
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>gb|AY104455.1| Zea mays PCO091750 mRNA sequence
          Length = 1044

 Score =  361 bits (182), Expect = 2e-96
 Identities = 353/410 (86%)
 Strand = Plus / Minus

                                                                       
Query: 131 ctggttggtcaacttcaagccctgccactccactcttcatagaattcagccacaaaagtc 190
           ||||||| ||||| |||||||||||||||||||||||| |||||||||||||||||   |
Sbjct: 809 ctggttgttcaacctcaagccctgccactccactcttcgtagaattcagccacaaattcc 750

                                                                       
Query: 191 tccatgaacttgtgccttttctctgctctctttttcccagcctctgtcttcatcatgtcc 250
           ||||||||| | ||||||||||| |||||| ||||||| |||||||||||||||||||||
Sbjct: 749 tccatgaacctatgccttttctcagctctccttttcccggcctctgtcttcatcatgtcc 690

                                                                       
Query: 251 ttcaacttaaaaagcttctcatggaaatgattaattgatgtttgtttctcctccttggac 310
           ||||  ||||||||||||||||| |||||||| |||||||| || ||||| |||||||||
Sbjct: 689 ttcagtttaaaaagcttctcatgaaaatgattgattgatgtctgcttctcttccttggac 630

                                                                       
Query: 311 atgtacttctcctttgacaaattatcccgcggaagtacgttaggatcatgcaatgcactg 370
           |||||||| || || |||||  |||| || || || |   |||||||||| ||||| |||
Sbjct: 629 atgtacttttctttcgacaagctatcacgtggcagaattctaggatcatgtaatgcgctg 570

                                                                       
Query: 371 ttcttgctccctccatatgtaaaacatcttgcaacgccaatcgcaccaattgcatccaga 430
           |||||||| || ||||||||||||||||||||||  ||||| || |||||||||||||  
Sbjct: 569 ttcttgctaccaccatatgtaaaacatcttgcaataccaattgccccaattgcatccaag 510

                                                                       
Query: 431 cgatctgcatcttgcacgattgcaaactcaagagtggtctctgcattaagcttctttgaa 490
           |||||||||||||| || |||||||| |||||||||| |||  || ||   || ||||||
Sbjct: 509 cgatctgcatcttgtacaattgcaaattcaagagtgggctcaacaatagatttatttgaa 450

                                                             
Query: 491 acctcatttttgaatcccatccctgtaataatggccactatttcctcctt 540
           || ||||||||||| ||||||||  ||||||| ||||||||||| |||||
Sbjct: 449 acttcatttttgaaccccatccccttaataattgccactatttcatcctt 400
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>gb|BT017587.1| Zea mays clone EL01N0430C11.c mRNA sequence
          Length = 916

 Score =  337 bits (170), Expect = 3e-89
 Identities = 350/410 (85%)
 Strand = Plus / Minus

                                                                       
Query: 131 ctggttggtcaacttcaagccctgccactccactcttcatagaattcagccacaaaagtc 190
           ||||||| ||||| |||||||||||||||||||||||| ||||||||| |||||||   |
Sbjct: 614 ctggttgttcaacctcaagccctgccactccactcttcgtagaattcacccacaaattcc 555

                                                                       
Query: 191 tccatgaacttgtgccttttctctgctctctttttcccagcctctgtcttcatcatgtcc 250
           ||||||| | | | ||||||||| || ||| ||||||| |||||||||||||||||||||
Sbjct: 554 tccatgaccctatcccttttctcagccctccttttcccggcctctgtcttcatcatgtcc 495

                                                                       
Query: 251 ttcaacttaaaaagcttctcatggaaatgattaattgatgtttgtttctcctccttggac 310
           ||||  ||||||||||||||||| |||||||| |||||||| || ||||| |||||||||
Sbjct: 494 ttcagtttaaaaagcttctcatgaaaatgattgattgatgtctgcttctcttccttggac 435

                                                                       
Query: 311 atgtacttctcctttgacaaattatcccgcggaagtacgttaggatcatgcaatgcactg 370
           |||||||| ||||| |||||  || | || || || |   |||||||||| ||||| |||
Sbjct: 434 atgtacttttccttcgacaagctaacacgtggcagaattctaggatcatgtaatgcgctg 375

                                                                       
Query: 371 ttcttgctccctccatatgtaaaacatcttgcaacgccaatcgcaccaattgcatccaga 430
           |||||||| || ||||||||||||||||||||||  ||||| || |||||||||||||| 
Sbjct: 374 ttcttgctaccaccatatgtaaaacatcttgcaataccaattgccccaattgcatccagg 315

                                                                       
Query: 431 cgatctgcatcttgcacgattgcaaactcaagagtggtctctgcattaagcttctttgaa 490
           |||||||||||||| || |||||||| |||||||||| |||  || ||   || ||||||
Sbjct: 314 cgatctgcatcttgtacaattgcaaattcaagagtgggctcaccaatagatttatttgaa 255

                                                             
Query: 491 acctcatttttgaatcccatccctgtaataatggccactatttcctcctt 540
           || ||||||||||| ||||||||  ||||||| ||||||||||| |||||
Sbjct: 254 acttcatttttgaaccccatccccttaataattgccactatttcatcctt 205
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>gb|AC087182.12| Oryza sativa chromosome 10 BAC OSJNBa0029C15 genomic sequence, complete
             sequence
          Length = 148816

 Score =  226 bits (114), Expect = 7e-56
 Identities = 159/174 (91%)
 Strand = Plus / Plus

                                                                         
Query: 231   cctctgtcttcatcatgtccttcaacttaaaaagcttctcatggaaatgattaattgatg 290
             ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 57749 cctctgtcttcatcatgtccttcaacttaaatagcttctcatggaaatgattaattgatg 57808

                                                                         
Query: 291   tttgtttctcctccttggacatgtacttctcctttgacaaattatcccgcggaagtacgt 350
             | ||||| || |||||||||||||| |||||||||||||||||||| ||||| ||||  |
Sbjct: 57809 tctgtttttcatccttggacatgtatttctcctttgacaaattatcacgcggcagtatct 57868

                                                                   
Query: 351   taggatcatgcaatgcactgttcttgctccctccatatgtaaaacatcttgcaa 404
             |||||||||||||||   | ||||||||||| ||||| ||||||||||||||||
Sbjct: 57869 taggatcatgcaatgtgtttttcttgctcccaccatacgtaaaacatcttgcaa 57922



 Score =  165 bits (83), Expect = 2e-37
 Identities = 98/103 (95%)
 Strand = Plus / Plus

                                                                         
Query: 131   ctggttggtcaacttcaagccctgccactccactcttcatagaattcagccacaaaagtc 190
             |||||||||||||||||||| |||||||||||||||||||||||||||||||||||   |
Sbjct: 57205 ctggttggtcaacttcaagctctgccactccactcttcatagaattcagccacaaagtcc 57264

                                                        
Query: 191   tccatgaacttgtgccttttctctgctctctttttcccagcct 233
             |||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 57265 tccatgaacttgtgccttttctctgctctctttttcccggcct 57307



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 89/102 (87%)
 Strand = Plus / Plus

                                                                         
Query: 406   gccaatcgcaccaattgcatccagacgatctgcatcttgcacgattgcaaactcaagagt 465
             |||||| |||||||||||||| ||||||||||||||||| || |||||||||||||||||
Sbjct: 58690 gccaattgcaccaattgcatcaagacgatctgcatcttgtacaattgcaaactcaagagt 58749

                                                       
Query: 466   ggtctctgcattaagcttctttgaaacctcatttttgaatcc 507
              | |||  ||  |  |||||||||||| ||||||||||||||
Sbjct: 58750 aggctcaacaacagacttctttgaaacttcatttttgaatcc 58791



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 92/109 (84%)
 Strand = Plus / Plus

                                                                         
Query: 506   cccatccctgtaataatggccactatttcctccttctgtccctcctcgagacccacctct 565
             ||||||||  |||| || ||||| ||||||||| |||| |||| ||| ||  ||||||||
Sbjct: 59035 cccatccccttaatgatcgccacaatttcctccctctggccctgctccagttccacctct 59094

                                                              
Query: 566   ccaagaaaccttttgacgatgctcatatcctccgcattatccctatcca 614
              |||||||||| |  ||||||||||||||||| ||||| ||||||||||
Sbjct: 59095 tcaagaaacctctccacgatgctcatatcctcagcattgtccctatcca 59143



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 89    gttggttggccaacttcaagc 109
             |||||||||||||||||||||
Sbjct: 57158 gttggttggccaacttcaagc 57178
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score =  226 bits (114), Expect = 7e-56
 Identities = 159/174 (91%)
 Strand = Plus / Minus

                                                                            
Query: 231      cctctgtcttcatcatgtccttcaacttaaaaagcttctcatggaaatgattaattgatg 290
                ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 17874292 cctctgtcttcatcatgtccttcaacttaaatagcttctcatggaaatgattaattgatg 17874233

                                                                            
Query: 291      tttgtttctcctccttggacatgtacttctcctttgacaaattatcccgcggaagtacgt 350
                | ||||| || |||||||||||||| |||||||||||||||||||| ||||| ||||  |
Sbjct: 17874232 tctgtttttcatccttggacatgtatttctcctttgacaaattatcacgcggcagtatct 17874173

                                                                      
Query: 351      taggatcatgcaatgcactgttcttgctccctccatatgtaaaacatcttgcaa 404
                |||||||||||||||   | ||||||||||| ||||| ||||||||||||||||
Sbjct: 17874172 taggatcatgcaatgtgtttttcttgctcccaccatacgtaaaacatcttgcaa 17874119



 Score =  165 bits (83), Expect = 2e-37
 Identities = 98/103 (95%)
 Strand = Plus / Minus

                                                                            
Query: 131      ctggttggtcaacttcaagccctgccactccactcttcatagaattcagccacaaaagtc 190
                |||||||||||||||||||| |||||||||||||||||||||||||||||||||||   |
Sbjct: 17874836 ctggttggtcaacttcaagctctgccactccactcttcatagaattcagccacaaagtcc 17874777

                                                           
Query: 191      tccatgaacttgtgccttttctctgctctctttttcccagcct 233
                |||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 17874776 tccatgaacttgtgccttttctctgctctctttttcccggcct 17874734



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 89/102 (87%)
 Strand = Plus / Minus

                                                                            
Query: 406      gccaatcgcaccaattgcatccagacgatctgcatcttgcacgattgcaaactcaagagt 465
                |||||| |||||||||||||| ||||||||||||||||| || |||||||||||||||||
Sbjct: 17873351 gccaattgcaccaattgcatcaagacgatctgcatcttgtacaattgcaaactcaagagt 17873292

                                                          
Query: 466      ggtctctgcattaagcttctttgaaacctcatttttgaatcc 507
                 | |||  ||  |  |||||||||||| ||||||||||||||
Sbjct: 17873291 aggctcaacaacagacttctttgaaacttcatttttgaatcc 17873250



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 92/109 (84%)
 Strand = Plus / Minus

                                                                            
Query: 506      cccatccctgtaataatggccactatttcctccttctgtccctcctcgagacccacctct 565
                ||||||||  |||| || ||||| ||||||||| |||| |||| ||| ||  ||||||||
Sbjct: 17873006 cccatccccttaatgatcgccacaatttcctccctctggccctgctccagttccacctct 17872947

                                                                 
Query: 566      ccaagaaaccttttgacgatgctcatatcctccgcattatccctatcca 614
                 |||||||||| |  ||||||||||||||||| ||||| ||||||||||
Sbjct: 17872946 tcaagaaacctctccacgatgctcatatcctcagcattgtccctatcca 17872898



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 89       gttggttggccaacttcaagc 109
                |||||||||||||||||||||
Sbjct: 17874883 gttggttggccaacttcaagc 17874863
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>dbj|AK106675.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-114-A07, full
            insert sequence
          Length = 1734

 Score =  226 bits (114), Expect = 7e-56
 Identities = 159/174 (91%)
 Strand = Plus / Minus

                                                                        
Query: 231  cctctgtcttcatcatgtccttcaacttaaaaagcttctcatggaaatgattaattgatg 290
            ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1407 cctctgtcttcatcatgtccttcaacttaaatagcttctcatggaaatgattaattgatg 1348

                                                                        
Query: 291  tttgtttctcctccttggacatgtacttctcctttgacaaattatcccgcggaagtacgt 350
            | ||||| || |||||||||||||| |||||||||||||||||||| ||||| ||||  |
Sbjct: 1347 tctgtttttcatccttggacatgtatttctcctttgacaaattatcacgcggcagtatct 1288

                                                                  
Query: 351  taggatcatgcaatgcactgttcttgctccctccatatgtaaaacatcttgcaa 404
            |||||||||||||||   | ||||||||||| ||||| ||||||||||||||||
Sbjct: 1287 taggatcatgcaatgtgtttttcttgctcccaccatacgtaaaacatcttgcaa 1234



 Score =  165 bits (83), Expect = 2e-37
 Identities = 173/203 (85%)
 Strand = Plus / Minus

                                                                       
Query: 406 gccaatcgcaccaattgcatccagacgatctgcatcttgcacgattgcaaactcaagagt 465
           |||||| |||||||||||||| ||||||||||||||||| || |||||||||||||||||
Sbjct: 466 gccaattgcaccaattgcatcaagacgatctgcatcttgtacaattgcaaactcaagagt 407

                                                                       
Query: 466 ggtctctgcattaagcttctttgaaacctcatttttgaatcccatccctgtaataatggc 525
            | |||  ||  |  |||||||||||| ||||||||||||||||||||  |||| || ||
Sbjct: 406 aggctcaacaacagacttctttgaaacttcatttttgaatcccatccccttaatgatcgc 347

                                                                       
Query: 526 cactatttcctccttctgtccctcctcgagacccacctctccaagaaaccttttgacgat 585
           ||| ||||||||| |||| |||| ||| ||  |||||||| |||||||||| |  |||||
Sbjct: 346 cacaatttcctccctctggccctgctccagttccacctcttcaagaaacctctccacgat 287

                                  
Query: 586 gctcatatcctccgcattatccc 608
           |||||||||||| ||||| ||||
Sbjct: 286 gctcatatcctcagcattgtccc 264
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score =  226 bits (114), Expect = 7e-56
 Identities = 159/174 (91%)
 Strand = Plus / Minus

                                                                            
Query: 231      cctctgtcttcatcatgtccttcaacttaaaaagcttctcatggaaatgattaattgatg 290
                ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 17883545 cctctgtcttcatcatgtccttcaacttaaatagcttctcatggaaatgattaattgatg 17883486

                                                                            
Query: 291      tttgtttctcctccttggacatgtacttctcctttgacaaattatcccgcggaagtacgt 350
                | ||||| || |||||||||||||| |||||||||||||||||||| ||||| ||||  |
Sbjct: 17883485 tctgtttttcatccttggacatgtatttctcctttgacaaattatcacgcggcagtatct 17883426

                                                                      
Query: 351      taggatcatgcaatgcactgttcttgctccctccatatgtaaaacatcttgcaa 404
                |||||||||||||||   | ||||||||||| ||||| ||||||||||||||||
Sbjct: 17883425 taggatcatgcaatgtgtttttcttgctcccaccatacgtaaaacatcttgcaa 17883372



 Score =  165 bits (83), Expect = 2e-37
 Identities = 98/103 (95%)
 Strand = Plus / Minus

                                                                            
Query: 131      ctggttggtcaacttcaagccctgccactccactcttcatagaattcagccacaaaagtc 190
                |||||||||||||||||||| |||||||||||||||||||||||||||||||||||   |
Sbjct: 17884089 ctggttggtcaacttcaagctctgccactccactcttcatagaattcagccacaaagtcc 17884030

                                                           
Query: 191      tccatgaacttgtgccttttctctgctctctttttcccagcct 233
                |||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 17884029 tccatgaacttgtgccttttctctgctctctttttcccggcct 17883987



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 89/102 (87%)
 Strand = Plus / Minus

                                                                            
Query: 406      gccaatcgcaccaattgcatccagacgatctgcatcttgcacgattgcaaactcaagagt 465
                |||||| |||||||||||||| ||||||||||||||||| || |||||||||||||||||
Sbjct: 17882604 gccaattgcaccaattgcatcaagacgatctgcatcttgtacaattgcaaactcaagagt 17882545

                                                          
Query: 466      ggtctctgcattaagcttctttgaaacctcatttttgaatcc 507
                 | |||  ||  |  |||||||||||| ||||||||||||||
Sbjct: 17882544 aggctcaacaacagacttctttgaaacttcatttttgaatcc 17882503



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 92/109 (84%)
 Strand = Plus / Minus

                                                                            
Query: 506      cccatccctgtaataatggccactatttcctccttctgtccctcctcgagacccacctct 565
                ||||||||  |||| || ||||| ||||||||| |||| |||| ||| ||  ||||||||
Sbjct: 17882259 cccatccccttaatgatcgccacaatttcctccctctggccctgctccagttccacctct 17882200

                                                                 
Query: 566      ccaagaaaccttttgacgatgctcatatcctccgcattatccctatcca 614
                 |||||||||| |  ||||||||||||||||| ||||| ||||||||||
Sbjct: 17882199 tcaagaaacctctccacgatgctcatatcctcagcattgtccctatcca 17882151



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 89       gttggttggccaacttcaagc 109
                |||||||||||||||||||||
Sbjct: 17884136 gttggttggccaacttcaagc 17884116
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>ref|NM_101594.1| Arabidopsis thaliana catalytic AT1G17330 mRNA, complete cds
          Length = 669

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 49/55 (89%)
 Strand = Plus / Minus

                                                                  
Query: 191 tccatgaacttgtgccttttctctgctctctttttcccagcctctgtcttcatca 245
           |||||||||||||||||||||||||| ||| |||| || ||||| || |||||||
Sbjct: 623 tccatgaacttgtgccttttctctgccctccttttacccgcctcagttttcatca 569
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>gb|BT009671.1| Arabidopsis thaliana At1g17330 mRNA, complete cds
          Length = 669

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 49/55 (89%)
 Strand = Plus / Minus

                                                                  
Query: 191 tccatgaacttgtgccttttctctgctctctttttcccagcctctgtcttcatca 245
           |||||||||||||||||||||||||| ||| |||| || ||||| || |||||||
Sbjct: 623 tccatgaacttgtgccttttctctgccctccttttacccgcctcagttttcatca 569
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>emb|BX818451.1|CNS0AE1F Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL79ZG09 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 545

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 49/55 (89%)
 Strand = Plus / Minus

                                                                  
Query: 191 tccatgaacttgtgccttttctctgctctctttttcccagcctctgtcttcatca 245
           |||||||||||||||||||||||||| ||| |||| || ||||| || |||||||
Sbjct: 315 tccatgaacttgtgccttttctctgccctccttttacccgcctcagttttcatca 261
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>gb|BT002376.1| Arabidopsis thaliana unknown protein (At1g17330) mRNA, complete cds
          Length = 935

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 49/55 (89%)
 Strand = Plus / Minus

                                                                  
Query: 191 tccatgaacttgtgccttttctctgctctctttttcccagcctctgtcttcatca 245
           |||||||||||||||||||||||||| ||| |||| || ||||| || |||||||
Sbjct: 680 tccatgaacttgtgccttttctctgccctccttttacccgcctcagttttcatca 626
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>gb|AC007843.6|AC007843 Arabidopsis thaliana chromosome I BAC F28G4 genomic sequence, complete
             sequence
          Length = 84974

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                                
Query: 191   tccatgaacttgtgccttttctctgctctcttttt 225
             |||||||||||||||||||||||||| ||| ||||
Sbjct: 84066 tccatgaacttgtgccttttctctgccctcctttt 84100
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>emb|AL591981.1| Listeria monocytogenes strain EGD, complete genome, segment 9/12
          Length = 347050

 Score = 48.1 bits (24), Expect = 0.036
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                              
Query: 413    gcaccaattgcatccagacgatctgcatcttg 444
              |||||||||||||||| ||| |||||||||||
Sbjct: 101294 gcaccaattgcatccaaacggtctgcatcttg 101325
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>gb|AC152158.10| Medicago truncatula clone mth2-139g10, complete sequence
          Length = 140874

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                 
Query: 262    aagcttctcatggaaatgattaattgatgtttgtt 296
              |||||||||||| |||||||||||||  |||||||
Sbjct: 122909 aagcttctcatgaaaatgattaattgtagtttgtt 122875



 Score = 44.1 bits (22), Expect = 0.56
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                        
Query: 192    ccatgaacttgtgccttttctctgctctctttttcccagcct 233
              ||||||||||||||||| |||| || ||| ||| ||||||||
Sbjct: 123179 ccatgaacttgtgccttctctcagccctcctttgcccagcct 123138
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>gb|AC161033.18| Medicago truncatula clone mth2-57g13, complete sequence
          Length = 109039

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                
Query: 262   aagcttctcatggaaatgattaattgatgtttgtt 296
             |||||||||||| |||||||||||||  |||||||
Sbjct: 18093 aagcttctcatgaaaatgattaattgtagtttgtt 18059



 Score = 44.1 bits (22), Expect = 0.56
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                       
Query: 192   ccatgaacttgtgccttttctctgctctctttttcccagcct 233
             ||||||||||||||||| |||| || ||| ||| ||||||||
Sbjct: 18363 ccatgaacttgtgccttctctcagccctcctttgcccagcct 18322
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>emb|CT025602.8| Mouse DNA sequence from clone RP23-458L4 on chromosome 14, complete
             sequence
          Length = 207863

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 615   ttcatcccatcagatacactta 636
             ||||||||||||||||||||||
Sbjct: 84361 ttcatcccatcagatacactta 84382
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>gb|AC132282.3| Mus musculus BAC clone RP24-348O21 from chromosome 14, complete
            sequence
          Length = 166747

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 615  ttcatcccatcagatacactta 636
            ||||||||||||||||||||||
Sbjct: 1722 ttcatcccatcagatacactta 1743
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>gb|AE014183.1| Mus musculus piebald deletion region section 11 of 11 of the complete
              sequence
          Length = 249616

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 615    ttcatcccatcagatacactta 636
              ||||||||||||||||||||||
Sbjct: 244441 ttcatcccatcagatacactta 244462
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>gb|AC018755.3|AC018755 Homo sapiens chromosome 19, BAC BC330783 (CIT-HSPC_470E3), complete
             sequence
          Length = 229155

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 205   ccttttctctgctctctttttc 226
             ||||||||||||||||||||||
Sbjct: 72439 ccttttctctgctctctttttc 72418
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>ref|XM_634007.1| Dictyostelium discoideum hypothetical protein (DDB0218506), partial
            mRNA
          Length = 2349

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 277  atgattaattgatgtttgttt 297
            |||||||||||||||||||||
Sbjct: 1842 atgattaattgatgtttgttt 1822
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>ref|XM_364293.1| Magnaporthe grisea 70-15 hypothetical protein (MG09138.4) partial
           mRNA
          Length = 672

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 550 ctcgagacccacctctccaag 570
           |||||||||||||||||||||
Sbjct: 442 ctcgagacccacctctccaag 462
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>gb|AY550908.1| Mus musculus hyperplastic discs protein (Edd) mRNA, complete cds
          Length = 8858

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 444  gcacgattgcaaactcaagag 464
            |||||||||||||||||||||
Sbjct: 3673 gcacgattgcaaactcaagag 3693
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>gb|AC113548.22| Mus musculus chromosome 9, clone RP23-268F15, complete sequence
          Length = 195273

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 104    tcaagccttgcccctcaagcc 124
              |||||||||||||||||||||
Sbjct: 104900 tcaagccttgcccctcaagcc 104880
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>gb|AC140182.2| Mus musculus BAC clone RP24-349I16 from chromosome 8, complete sequence
          Length = 151221

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 122   gcccacggtctggttggtcaa 142
             |||||||||||||||||||||
Sbjct: 26073 gcccacggtctggttggtcaa 26093
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>ref|XM_984858.1| PREDICTED: Mus musculus E3 ubiquitin protein ligase, HECT domain
            containing, 1 (Edd1), mRNA
          Length = 10026

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 444  gcacgattgcaaactcaagag 464
            |||||||||||||||||||||
Sbjct: 4318 gcacgattgcaaactcaagag 4338
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>ref|XM_912064.2| PREDICTED: Mus musculus E3 ubiquitin protein ligase, HECT domain
            containing, 1, transcript variant 10 (Edd1), mRNA
          Length = 9455

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 444  gcacgattgcaaactcaagag 464
            |||||||||||||||||||||
Sbjct: 3747 gcacgattgcaaactcaagag 3767
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>ref|XM_898880.2| PREDICTED: Mus musculus E3 ubiquitin protein ligase, HECT domain
           containing, 1, transcript variant 8 (Edd1), mRNA
          Length = 6546

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 444 gcacgattgcaaactcaagag 464
           |||||||||||||||||||||
Sbjct: 838 gcacgattgcaaactcaagag 858
to top
>ref|XM_898886.2| PREDICTED: Mus musculus E3 ubiquitin protein ligase, HECT domain
           containing, 1, transcript variant 9 (Edd1), mRNA
          Length = 6493

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 444 gcacgattgcaaactcaagag 464
           |||||||||||||||||||||
Sbjct: 785 gcacgattgcaaactcaagag 805
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>ref|XM_898869.2| PREDICTED: Mus musculus E3 ubiquitin protein ligase, HECT domain
            containing, 1, transcript variant 5 (Edd1), mRNA
          Length = 9793

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 444  gcacgattgcaaactcaagag 464
            |||||||||||||||||||||
Sbjct: 4082 gcacgattgcaaactcaagag 4102
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>ref|XM_196130.7| PREDICTED: Mus musculus E3 ubiquitin protein ligase, HECT domain
            containing, 1, transcript variant 1 (Edd1), mRNA
          Length = 9772

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 444  gcacgattgcaaactcaagag 464
            |||||||||||||||||||||
Sbjct: 4064 gcacgattgcaaactcaagag 4084
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>gb|AC102358.5| Mus musculus chromosome 8, clone RP23-451H9, complete sequence
          Length = 202151

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 122    gcccacggtctggttggtcaa 142
              |||||||||||||||||||||
Sbjct: 167866 gcccacggtctggttggtcaa 167886
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>gb|AC018738.4| Homo sapiens BAC clone RP11-419H23 from 2, complete sequence
          Length = 178530

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 13    agtttcatgggaacctgaacaatga 37
             ||||||||||||| |||||||||||
Sbjct: 81572 agtttcatgggaagctgaacaatga 81596
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>gb|AC116329.3| Mus musculus BAC clone RP24-290C19 from 5, complete sequence
          Length = 170072

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 532 ttcctccttctgtccctcctc 552
           |||||||||||||||||||||
Sbjct: 302 ttcctccttctgtccctcctc 282
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>gb|AC113596.8| Mus musculus chromosome 5, clone RP23-374B20, complete sequence
          Length = 203500

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 532   ttcctccttctgtccctcctc 552
             |||||||||||||||||||||
Sbjct: 17768 ttcctccttctgtccctcctc 17788
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>gb|BC047348.1| Mus musculus E3 ubiquitin protein ligase, HECT domain containing, 1,
            mRNA (cDNA clone IMAGE:4953361)
          Length = 7763

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 444  gcacgattgcaaactcaagag 464
            |||||||||||||||||||||
Sbjct: 2576 gcacgattgcaaactcaagag 2596
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>gb|AC012289.12| Homo sapiens chromosome 18, clone RP11-7E6, complete sequence
          Length = 165022

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 266    ttctcatggaaatgattaatt 286
              |||||||||||||||||||||
Sbjct: 158554 ttctcatggaaatgattaatt 158574
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>dbj|AK083545.1| Mus musculus 9 days embryo whole body cDNA, RIKEN full-length
            enriched library, clone:D030042K14 product:PROGESTIN
            INDUCED PROTEIN homolog [Homo sapiens], full insert
            sequence
          Length = 2769

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 444  gcacgattgcaaactcaagag 464
            |||||||||||||||||||||
Sbjct: 2206 gcacgattgcaaactcaagag 2226
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>gb|AC004828.2|AC004828 Homo sapiens clone DJ0514A23, complete sequence
          Length = 183249

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 215   gctctctttttcccagcctct 235
             |||||||||||||||||||||
Sbjct: 38579 gctctctttttcccagcctct 38559
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>emb|CT025919.8| Zebrafish DNA sequence from clone DKEY-199O23 in linkage group 5,
            complete sequence
          Length = 14176

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 529  tatttcctccttctgtccctc 549
            |||||||||||||||||||||
Sbjct: 1597 tatttcctccttctgtccctc 1617
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>dbj|AK122398.1| Mus musculus mRNA for mKIAA0896 protein
          Length = 5715

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 444 gcacgattgcaaactcaagag 464
           |||||||||||||||||||||
Sbjct: 556 gcacgattgcaaactcaagag 576
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>emb|CR932980.12| Zebrafish DNA sequence from clone DKEY-81L13 in linkage group 5, complete
              sequence
          Length = 253220

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 529    tatttcctccttctgtccctc 549
              |||||||||||||||||||||
Sbjct: 252819 tatttcctccttctgtccctc 252839
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>emb|AL392024.3|CNS06C8K Human chromosome 14 DNA sequence BAC R-182E21 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 146235

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 215   gctctctttttcccagcctct 235
             |||||||||||||||||||||
Sbjct: 72706 gctctctttttcccagcctct 72726
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 601      attatccctatccattcatc 620
                ||||||||||||||||||||
Sbjct: 18478679 attatccctatccattcatc 18478660
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>gb|AC159238.2| Mus musculus BAC clone RP24-477O8 from chromosome 12, complete sequence
          Length = 176407

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 605   tccctatccattcatcccat 624
             ||||||||||||||||||||
Sbjct: 20509 tccctatccattcatcccat 20528
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>emb|CR376787.10| Zebrafish DNA sequence from clone DKEY-33C9 in linkage group 7, complete
              sequence
          Length = 217684

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 282    taattgatgtttgtttctcc 301
              ||||||||||||||||||||
Sbjct: 134268 taattgatgtttgtttctcc 134287
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>emb|CR352303.12| Zebrafish DNA sequence from clone CH211-157C9 in linkage group 5,
             complete sequence
          Length = 45283

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 288   atgtttgtttctcctccttg 307
             ||||||||||||||||||||
Sbjct: 33295 atgtttgtttctcctccttg 33314
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>emb|CR759843.7| Zebrafish DNA sequence from clone DKEYP-82B4 in linkage group 22,
             complete sequence
          Length = 190165

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 288   atgtttgtttctcctccttg 307
             ||||||||||||||||||||
Sbjct: 56944 atgtttgtttctcctccttg 56925
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>gb|AC103453.7| Rattus norvegicus 13 BAC CH230-127N19 (Children's Hospital Oakland
              Research Institute) complete sequence
          Length = 199669

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 282    taattgatgtttgtttctcc 301
              ||||||||||||||||||||
Sbjct: 111868 taattgatgtttgtttctcc 111849
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>emb|AL645847.15| Mouse DNA sequence from clone RP23-428I5 on chromosome 11 Contains the
             3' end of the Trim16 gene for tripartite motif protein 16,
             the gene for a novel WD domain, G-beta repeat domain
             containing protein, the gene for the ortholog of human
             family with sequence similarity 18 member B FAM18B, a
             novel gene and the 5' end of a novel gene, complete
             sequence
          Length = 124933

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 170   tagaattcagccacaaaagt 189
             ||||||||||||||||||||
Sbjct: 25613 tagaattcagccacaaaagt 25632
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>gb|AC087235.13| Homo sapiens 12 BAC RP11-153K16 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 157610

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 209   ttctctgctctctttttccc 228
             ||||||||||||||||||||
Sbjct: 58199 ttctctgctctctttttccc 58180
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>emb|AL954245.1| Pan troglodytes chromosome 22 clone PTB-047B05 map 22q22.3, complete
              sequence
          Length = 176622

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 481    cttctttgaaacctcatttt 500
              ||||||||||||||||||||
Sbjct: 126926 cttctttgaaacctcatttt 126907
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>emb|BX897739.8| Zebrafish DNA sequence from clone CH211-160J20 in linkage group 14,
             complete sequence
          Length = 162410

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 288   atgtttgtttctcctccttg 307
             ||||||||||||||||||||
Sbjct: 18793 atgtttgtttctcctccttg 18774
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>ref|NM_205110.1| Gallus gallus topoisomerase (DNA) I (TOP1), mRNA
          Length = 3844

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 293  tgtttctcctccttggacat 312
            ||||||||||||||||||||
Sbjct: 1212 tgtttctcctccttggacat 1193
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>gb|AC018525.8| Homo sapiens chromosome 8, clone RP11-3J13, complete sequence
          Length = 150052

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 531   tttcctccttctgtccctcc 550
             ||||||||||||||||||||
Sbjct: 57534 tttcctccttctgtccctcc 57553
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>gb|AC113370.2| Homo sapiens chromosome 5 clone RP11-124O5, complete sequence
          Length = 189590

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 280   attaattgatgtttgtttct 299
             ||||||||||||||||||||
Sbjct: 95231 attaattgatgtttgtttct 95250
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>gb|AC109469.2| Homo sapiens chromosome 5 clone RP11-349F8, complete sequence
          Length = 184776

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 280  attaattgatgtttgtttct 299
            ||||||||||||||||||||
Sbjct: 4391 attaattgatgtttgtttct 4410
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>dbj|AP006716.1| Staphylococcus haemolyticus JCSC1435 DNA, complete genome
          Length = 2685015

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                  
Query: 407    ccaatcgcaccaattgcatccagacgatctgcatct 442
              ||||| |||||||| ||||| || ||||||||||||
Sbjct: 949209 ccaatagcaccaatcgcatctagtcgatctgcatct 949244
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>gb|AF232689.2| Rat cytomegalovirus Maastricht, complete genome
          Length = 230138

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 233    tctgtcttcatcatgtcctt 252
              ||||||||||||||||||||
Sbjct: 171823 tctgtcttcatcatgtcctt 171804
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>gb|AC010595.7| Homo sapiens chromosome 5 clone CTC-480C2, complete sequence
          Length = 179484

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 206   cttttctctgctctcttttt 225
             ||||||||||||||||||||
Sbjct: 21466 cttttctctgctctcttttt 21447
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>gb|AC090567.7| Homo sapiens chromosome 8, clone RP11-18L2, complete sequence
          Length = 182622

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 611    tccattcatcccatcagata 630
              ||||||||||||||||||||
Sbjct: 156180 tccattcatcccatcagata 156199
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>gb|AC026700.5| Homo sapiens chromosome 5 clone CTC-534B23, complete sequence
          Length = 59483

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 206   cttttctctgctctcttttt 225
             ||||||||||||||||||||
Sbjct: 40197 cttttctctgctctcttttt 40178
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 367      actgttcttgctccctccat 386
                ||||||||||||||||||||
Sbjct: 29019174 actgttcttgctccctccat 29019155
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 601      attatccctatccattcatc 620
                ||||||||||||||||||||
Sbjct: 18472720 attatccctatccattcatc 18472701
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>gb|AC097367.3| Oryza sativa chromosome 3 BAC OSJNBa0051C19 genomic sequence,
            complete sequence
          Length = 90673

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 601  attatccctatccattcatc 620
            ||||||||||||||||||||
Sbjct: 2536 attatccctatccattcatc 2555
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>gb|CP000084.1| Candidatus Pelagibacter ubique HTCC1062, complete genome
          Length = 1308759

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 293     tgtttctcctccttggacat 312
               ||||||||||||||||||||
Sbjct: 1290603 tgtttctcctccttggacat 1290622
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>dbj|AP003726.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0596H10
          Length = 166570

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 367   actgttcttgctccctccat 386
             ||||||||||||||||||||
Sbjct: 34161 actgttcttgctccctccat 34142
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>dbj|AP005354.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1159C3, complete
            sequence
          Length = 133276

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 531  tttcctccttctgtccctcc 550
            ||||||||||||||||||||
Sbjct: 9769 tttcctccttctgtccctcc 9788
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>emb|AJ491854.1|OSA491854 Oryza sativa (japonica cultivar-group) partial hkt9 gene for putative
            sodium transporter, exons 1-3
          Length = 2206

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 367  actgttcttgctccctccat 386
            ||||||||||||||||||||
Sbjct: 1945 actgttcttgctccctccat 1964
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>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome
          Length = 3551823

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 235     tgtcttcatcatgtccttca 254
               ||||||||||||||||||||
Sbjct: 2025614 tgtcttcatcatgtccttca 2025633
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>emb|Z97338.2|ATFCA3 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 3
          Length = 200252

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 554   agacccacctctccaagaaa 573
             ||||||||||||||||||||
Sbjct: 23705 agacccacctctccaagaaa 23686
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>emb|AL161540.2|ATCHRIV40 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 40
          Length = 197405

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 554    agacccacctctccaagaaa 573
              ||||||||||||||||||||
Sbjct: 169587 agacccacctctccaagaaa 169568
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>emb|AL929165.9| Mouse DNA sequence from clone RP23-446D4 on chromosome 2, complete
              sequence
          Length = 181326

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 223    tttcccagcctctgtcttca 242
              ||||||||||||||||||||
Sbjct: 123572 tttcccagcctctgtcttca 123553
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>gb|AC140360.4| Mus musculus BAC clone RP24-241G4 from chromosome 12, complete sequence
          Length = 181901

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 605    tccctatccattcatcccat 624
              ||||||||||||||||||||
Sbjct: 171409 tccctatccattcatcccat 171428
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>dbj|AB000407.1| Gallus gallus mRNA for DNA topoisomerase I, complete cds
          Length = 3844

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 293  tgtttctcctccttggacat 312
            ||||||||||||||||||||
Sbjct: 1212 tgtttctcctccttggacat 1193
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>emb|AJ492242.1|STU492242 Solanum tuberosum DNA for genomic PstI fragment from 3'end, clone
           GP219
          Length = 538

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 463 agtggtctctgcattaagcttctt 486
           |||||||||| |||||||||||||
Sbjct: 402 agtggtctcttcattaagcttctt 425


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,296,160
Number of Sequences: 3902068
Number of extensions: 6296160
Number of successful extensions: 126120
Number of sequences better than 10.0: 77
Number of HSP's better than 10.0 without gapping: 77
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 125746
Number of HSP's gapped (non-prelim): 372
length of query: 637
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 614
effective length of database: 17,143,297,704
effective search space: 10525984790256
effective search space used: 10525984790256
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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