ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd16f21
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1WAPL_DROME (Q9W517) Protein wings apart-like (Protein parallel s... 29 9.7
2CYAA_PASMU (Q05766) Adenylate cyclase (EC 4.6.1.1) (ATP pyrophos... 29 9.7

>WAPL_DROME (Q9W517) Protein wings apart-like (Protein parallel sister|
           chromatids)
          Length = 1741

 Score = 29.3 bits (64), Expect = 9.7
 Identities = 23/73 (31%), Positives = 31/73 (42%), Gaps = 4/73 (5%)
 Frame = +3

Query: 318 RNPHSQL----RGARFSSTAVPVRLNGSNHSISPRTKTFPANQFHTQCFTEVMQPHLITP 485
           ++ H QL     GA  +S A P  +N    + SP      AN    Q           TP
Sbjct: 507 KHKHKQLLAAGSGAAPASGATPAEINSEFKTPSPHLALSEANSQQAQH----------TP 556

Query: 486 SNLSQLHSLLPRQ 524
           S+L QLH L P++
Sbjct: 557 SHLHQLHQLHPQR 569



to top

>CYAA_PASMU (Q05766) Adenylate cyclase (EC 4.6.1.1) (ATP pyrophosphate-lyase)|
           (Adenylyl cyclase)
          Length = 838

 Score = 29.3 bits (64), Expect = 9.7
 Identities = 15/33 (45%), Positives = 19/33 (57%)
 Frame = +1

Query: 319 ETRTLSFEGPDLVLLLFRSALMEAITASAPGPR 417
           E RTL FEGP+ +LL  +  L   I   AP P+
Sbjct: 608 EIRTLHFEGPNAILLALK-VLSNKIHRGAPSPK 639


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 76,630,313
Number of Sequences: 219361
Number of extensions: 1440089
Number of successful extensions: 3266
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3183
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3265
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5596027262
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top