ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd16f18
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK072993.1| Oryza sativa (japonica cultivar-group) cDNA clon... 357 3e-95
2gb|AY105469.1| Zea mays PCO074837 mRNA sequence 180 3e-42
3gb|AY106737.1| Zea mays PCO074838 mRNA sequence 159 1e-35
4gb|BT017657.1| Zea mays clone EL01N0440D03.c mRNA sequence 157 5e-35
5dbj|AK069534.1| Oryza sativa (japonica cultivar-group) cDNA clon... 139 1e-29
6dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 129 1e-26
7gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 129 1e-26
8emb|AL731742.3|CNS08C7R Oryza sativa chromosome 12, . BAC OJ1123... 129 1e-26
9gb|AC146592.1| Oryza sativa (japonica cultivar-group) chromosome... 86 1e-13
10dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 86 1e-13
11gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 86 1e-13
12gb|AY112017.1| Zea mays CL3093_1 mRNA sequence 84 6e-13
13gb|AC141112.7| Medicago truncatula clone mth2-15m12, complete se... 44 0.51
14gb|AC009299.5| Homo sapiens BAC clone RP11-26B22 from 2, complet... 44 0.51
15emb|BX001024.7| Zebrafish DNA sequence from clone CH211-42I24, c... 44 0.51
16emb|AL954373.12| Zebrafish DNA sequence from clone DKEY-48F17 in... 44 0.51
17ref|NM_193971.1| Oryza sativa (japonica cultivar-group), predic... 42 2.0
18emb|Z71183.2|HSN28H9 Human DNA sequence from clone LL22NC03-28H9... 42 2.0
19gb|AC155721.7| Mus musculus 6 BAC RP24-186O21 (Roswell Park Canc... 42 2.0
20emb|BX648644.1|HSM808795 Homo sapiens mRNA; cDNA DKFZp686B08113 ... 42 2.0
21emb|AL606472.13| Mouse DNA sequence from clone RP23-66B21 on chr... 42 2.0
22gb|AC145335.15| Pan troglodytes clone rp43-26k12, complete sequence 42 2.0
23dbj|AK054739.1| Homo sapiens cDNA FLJ30177 fis, clone BRACE2001065 42 2.0
24gb|AC159214.2| Pan troglodytes BAC clone CH251-522M3 from chromo... 42 2.0
25gb|AC018634.3|AC018634 Human Chromosome 7 clone RP11-243E12, com... 42 2.0
26emb|BX648220.1|HSM808368 Homo sapiens mRNA; cDNA DKFZp686K179 (f... 42 2.0
27emb|BX648151.1|HSM808298 Homo sapiens mRNA; cDNA DKFZp686J179 (f... 42 2.0
28dbj|AK100317.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.0
29emb|AL590502.12| Human DNA sequence from clone RP11-144G16 on ch... 42 2.0
30gb|AC153908.2| Mus musculus 6 BAC RP23-190K19 (Roswell Park Canc... 42 2.0
31ref|NM_115927.4| Arabidopsis thaliana transcription factor AT3G6... 40 7.9
32gb|AC111126.16| Mus musculus chromosome 5, clone RP23-336F4, com... 40 7.9
33gb|AY596598.1| Saccharum officinarum clone SCCCCL3001E12, comple... 40 7.9
34ref|XM_753059.1| Ustilago maydis 521 hypothetical protein (UM020... 40 7.9
35gb|AC134528.6| Mus musculus BAC clone RP24-502G8 from chromosome... 40 7.9
36emb|AL158837.14| Human DNA sequence from clone RP11-102C16 on ch... 40 7.9
37gb|AY096372.1| Arabidopsis thaliana putative scarecrow protein (... 40 7.9
38gb|AY064062.1| Arabidopsis thaliana putative scarecrow protein (... 40 7.9
39gb|AC092993.3| Homo sapiens 3 BAC RP11-649C16 (Roswell Park Canc... 40 7.9
40gb|AC182490.3| Pan troglodytes BAC clone CH251-430P12 from chrom... 40 7.9
41gb|AC120781.23| Pan troglodytes clone rp43-28m17, complete sequence 40 7.9
42dbj|AK084052.1| Mus musculus 12 days embryo spinal ganglion cDNA... 40 7.9
43ref|XM_392899.2| PREDICTED: Apis mellifera similar to ENSANGP000... 40 7.9
44dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.9
45emb|BX823015.1|CNS0A7F6 Arabidopsis thaliana Full-length cDNA Co... 40 7.9
46gb|AC154554.2| Mus musculus BAC clone RP23-416P6 from chromosome... 40 7.9
47gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 7.9
48gb|AC115927.10| Mus musculus chromosome 1, clone RP24-529H22, co... 40 7.9
49dbj|AP003207.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.9
50dbj|AP002870.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.9
51emb|AJ326677.1|HSA326677 Homo sapiens genomic sequence surroundi... 40 7.9
52emb|BX255967.4| Zebrafish DNA sequence from clone CH211-191G22 i... 40 7.9
53gb|AY108813.1| Zea mays PCO104391 mRNA sequence 40 7.9
54emb|AL162295.1|ATT4C21 Arabidopsis thaliana DNA chromosome 3, BA... 40 7.9
55dbj|AP006101.1| Lotus japonicus genomic DNA, chromosome 1, clone... 40 7.9
56gb|AC142105.7| Mus musculus BAC clone RP24-240E7 from chromosome... 40 7.9 
>dbj|AK072993.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023146P12, full
            insert sequence
          Length = 3638

 Score =  357 bits (180), Expect = 3e-95
 Identities = 326/374 (87%), Gaps = 3/374 (0%)
 Strand = Plus / Minus

                                                                        
Query: 209  ctttgaacattcatgtcccgttcattcttctcagccagagcttttgccgctcgttcacgg 268
            |||||||| | ||| |||||||||||||| |||||||| |||||||||||||||||||||
Sbjct: 2766 ctttgaacctgcatatcccgttcattcttttcagccagggcttttgccgctcgttcacgg 2707

                                                                        
Query: 269  gtccgttgatgccgctccaacctagcacgtcttctctcttcactctctccttcaaccgct 328
            |||| ||||||||| || ||||||||||||||||| |||||||||||||||||||   ||
Sbjct: 2706 gtcctttgatgccgttcgaacctagcacgtcttctttcttcactctctccttcaatttct 2647

                                                                        
Query: 329  tgaaattcatcagatgacgtgggagctcctccaaatatcgcagataggtcatctgcaaaa 388
            |||||||| |||||||| |||||||||||||||||||| ||||||||||||||||||| |
Sbjct: 2646 tgaaattcttcagatgatgtgggagctcctccaaatattgcagataggtcatctgcaata 2587

                                                                        
Query: 389  tttgttgtagatgatgcctttcgcatagatgatgctgaagcagtggttgctgcccctcta 448
            |||||||| ||||||||||| ||||||   |||||||||||||  | |||||||||||||
Sbjct: 2586 tttgttgttgatgatgccttccgcata---gatgctgaagcagaagatgctgcccctcta 2530

                                                                        
Query: 449  ctttgactttgagcattaaacgtaggatccactgttggagccctttgcttaggtgcgctg 508
             ||||| |||||| ||| ||| | | |||| ||||||||||||||||||| || || || 
Sbjct: 2529 ttttgagtttgagaattgaacatcgaatccgctgttggagccctttgcttcggcgcacta 2470

                                                                        
Query: 509  tttgctcgggtacccataccaaaaaaggactcgaggtcatctggtttactctgtttttct 568
            || ||||| |  ||||||||||| |||||||| || || || ||||||||||||||||||
Sbjct: 2469 ttggctcgagctcccataccaaagaaggactcaagatcgtccggtttactctgtttttct 2410

                          
Query: 569  cttgccgctgctgc 582
             |||| || |||||
Sbjct: 2409 tttgctgcagctgc 2396
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>gb|AY105469.1| Zea mays PCO074837 mRNA sequence
          Length = 564

 Score =  180 bits (91), Expect = 3e-42
 Identities = 160/183 (87%)
 Strand = Plus / Minus

                                                                       
Query: 227 cgttcattcttctcagccagagcttttgccgctcgttcacgggtccgttgatgccgctcc 286
           ||||||||||| ||||||| ||||||||||||||||||||| || | ||||||||| |||
Sbjct: 561 cgttcattcttttcagccaaagcttttgccgctcgttcacgagttctttgatgccgttcc 502

                                                                       
Query: 287 aacctagcacgtcttctctcttcactctctccttcaaccgcttgaaattcatcagatgac 346
           ||||||||||||||||| ||||| ||||| || |||||  ||||||||||||  ||||||
Sbjct: 501 aacctagcacgtcttctttcttcgctctccccatcaacttcttgaaattcatttgatgac 442

                                                                       
Query: 347 gtgggagctcctccaaatatcgcagataggtcatctgcaaaatttgttgtagatgatgcc 406
           || ||||||||||||||||  ||||| | |||||| |||| ||||| ||| |||||||||
Sbjct: 441 gtaggagctcctccaaataatgcagacaagtcatcagcaacatttgctgttgatgatgcc 382

              
Query: 407 ttt 409
           |||
Sbjct: 381 ttt 379



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 115/138 (83%)
 Strand = Plus / Minus

                                                                       
Query: 442 ccctctactttgactttgagcattaaacgtaggatccactgttggagccctttgcttagg 501
           ||||||| ||||  |||||| || |||| ||| |||||| ||||||||||||||||| ||
Sbjct: 355 ccctctattttgcgtttgagaatcaaacatagaatccacagttggagccctttgcttcgg 296

                                                                       
Query: 502 tgcgctgtttgctcgggtacccataccaaaaaaggactcgaggtcatctggtttactctg 561
            || || || ||||||| |||||||||||| ||||| || || ||||||||||| ||   
Sbjct: 295 agcactattagctcgggcacccataccaaataaggattctagatcatctggtttgcttgt 236

                             
Query: 562 tttttctcttgccgctgc 579
           |||||||||||| |||||
Sbjct: 235 tttttctcttgcagctgc 218
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>gb|AY106737.1| Zea mays PCO074838 mRNA sequence
          Length = 1646

 Score =  159 bits (80), Expect = 1e-35
 Identities = 163/190 (85%), Gaps = 3/190 (1%)
 Strand = Plus / Minus

                                                                       
Query: 220 catgtcccgttcattcttctcagccagagcttttgccgctcgttcacgggtccgttgatg 279
           |||||| ||||||||||||||||||| ||| ||||||||||||||||| || | ||||||
Sbjct: 824 catgtcgcgttcattcttctcagccaaagcctttgccgctcgttcacgagttctttgatg 765

                                                                       
Query: 280 ccgctccaacctagcacgtcttctctcttcactctctccttcaaccgcttgaaattcatc 339
           ||| |||| |||||| |||||||| ||||| ||||| || || ||  |||||||||| ||
Sbjct: 764 ccgttccatcctagcgcgtcttctttcttcgctctccccatctacttcttgaaattcttc 705

                                                                       
Query: 340 agatgacgtgggagctcctccaaatatcgcagataggtcatctgcaaaatttgttgtaga 399
              ||| || ||||||||||||||||||||||| | |||||| |||| ||||||||| ||
Sbjct: 704 ---tgatgtaggagctcctccaaatatcgcagacaagtcatcagcaatatttgttgttga 648

                     
Query: 400 tgatgccttt 409
           ||||||||||
Sbjct: 647 tgatgccttt 638



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 108/132 (81%)
 Strand = Plus / Minus

                                                                       
Query: 442 ccctctactttgactttgagcattaaacgtaggatccactgttggagccctttgcttagg 501
           ||||||| ||||  |||||| || |||| |||  ||||| || |||||||||||||| ||
Sbjct: 614 ccctctattttgcgtttgagaatgaaacatagagtccacagtcggagccctttgcttcgg 555

                                                                       
Query: 502 tgcgctgtttgctcgggtacccataccaaaaaaggactcgaggtcatctggtttactctg 561
            || || || ||||| | |||||||||||| |||||||| || ||||||||||| |||  
Sbjct: 554 agcactattagctcgagcacccataccaaagaaggactctagatcatctggtttgctcgt 495

                       
Query: 562 tttttctcttgc 573
           ||| ||||||||
Sbjct: 494 tttatctcttgc 483
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>gb|BT017657.1| Zea mays clone EL01N0440D03.c mRNA sequence
          Length = 1007

 Score =  157 bits (79), Expect = 5e-35
 Identities = 164/191 (85%), Gaps = 1/191 (0%)
 Strand = Plus / Minus

                                                                       
Query: 220 catgtcccgttcattcttctcagccagagcttttgccgctcgttcacgggtc-cgttgat 278
           |||||| ||||||||||||||||||| ||| ||||||||||||||||    | | |||||
Sbjct: 221 catgtcacgttcattcttctcagccaaagcctttgccgctcgttcaccacgctctttgat 162

                                                                       
Query: 279 gccgctccaacctagcacgtcttctctcttcactctctccttcaaccgcttgaaattcat 338
           |||| |||||||||||||||||||| ||||| ||||| || |||||  ||||||||||||
Sbjct: 161 gccgttccaacctagcacgtcttctttcttcgctctccccatcaacttcttgaaattcat 102

                                                                       
Query: 339 cagatgacgtgggagctcctccaaatatcgcagataggtcatctgcaaaatttgttgtag 398
           | ||||| || ||||||||||||||||  ||||| | |||||| |||| ||||| ||| |
Sbjct: 101 ctgatgatgtaggagctcctccaaataatgcagacaagtcatcagcaacatttgctgttg 42

                      
Query: 399 atgatgccttt 409
           |||||||||||
Sbjct: 41  atgatgccttt 31
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>dbj|AK069534.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023021N21, full
            insert sequence
          Length = 3324

 Score =  139 bits (70), Expect = 1e-29
 Identities = 109/122 (89%)
 Strand = Plus / Minus

                                                                        
Query: 224  tcccgttcattcttctcagccagagcttttgccgctcgttcacgggtccgttgatgccgc 283
            |||||||| ||||||||||||||||||||||||||||||||||||||||  ||||| || 
Sbjct: 2516 tcccgttcgttcttctcagccagagcttttgccgctcgttcacgggtcctctgatggcgt 2457

                                                                        
Query: 284  tccaacctagcacgtcttctctcttcactctctccttcaaccgcttgaaattcatcagat 343
            || || |||||||||||||| |||||||||||||| |||||  |||| ||| ||||||||
Sbjct: 2456 tctaatctagcacgtcttctttcttcactctctccctcaacttcttggaatacatcagat 2397

              
Query: 344  ga 345
            ||
Sbjct: 2396 ga 2395



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 93/114 (81%)
 Strand = Plus / Minus

                                                                        
Query: 457  ttgagcattaaacgtaggatccactgttggagccctttgcttaggtgcgctgtttgctcg 516
            ||||| || |||| ||| |||||||||||||| ||| ||||| || || || ||||||||
Sbjct: 2271 ttgagaatcaaacatagaatccactgttggagtcctctgctttggcgcactatttgctcg 2212

                                                                  
Query: 517  ggtacccataccaaaaaaggactcgaggtcatctggtttactctgtttttctct 570
            || ||||  |||||| || ||||| || ||||||| |   ||||||||||||||
Sbjct: 2211 ggcacccgcaccaaagaaagactcaagatcatctgctgagctctgtttttctct 2158
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score =  129 bits (65), Expect = 1e-26
 Identities = 92/101 (91%)
 Strand = Plus / Plus

                                                                            
Query: 255      ccgctcgttcacgggtccgttgatgccgctccaacctagcacgtcttctctcttcactct 314
                |||||||||||||||||| ||||||||| || ||||||||||||||||| ||||||||||
Sbjct: 22210472 ccgctcgttcacgggtcctttgatgccgttcgaacctagcacgtcttctttcttcactct 22210531

                                                         
Query: 315      ctccttcaaccgcttgaaattcatcagatgacgtgggagct 355
                |||||||||   |||||||||| |||||||| |||||||||
Sbjct: 22210532 ctccttcaatttcttgaaattcttcagatgatgtgggagct 22210572



 Score =  115 bits (58), Expect = 2e-22
 Identities = 96/108 (88%), Gaps = 3/108 (2%)
 Strand = Plus / Plus

                                                                            
Query: 354      ctcctccaaatatcgcagataggtcatctgcaaaatttgttgtagatgatgcctttcgca 413
                ||||||||||||| ||||||||||||||||||| ||||||||| ||||||||||| ||||
Sbjct: 22210669 ctcctccaaatattgcagataggtcatctgcaatatttgttgttgatgatgccttccgca 22210728

                                                                
Query: 414      tagatgatgctgaagcagtggttgctgcccctctactttgactttgag 461
                ||   |||||||||||||  | ||||||||||||| ||||| ||||||
Sbjct: 22210729 ta---gatgctgaagcagaagatgctgcccctctattttgagtttgag 22210773



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 87/103 (84%)
 Strand = Plus / Plus

                                                                            
Query: 480      ctgttggagccctttgcttaggtgcgctgtttgctcgggtacccataccaaaaaaggact 539
                ||||||||||||||||||| || || || || ||||| |  ||||||||||| |||||||
Sbjct: 22210877 ctgttggagccctttgcttcggcgcactattggctcgagctcccataccaaagaaggact 22210936

                                                           
Query: 540      cgaggtcatctggtttactctgtttttctcttgccgctgctgc 582
                | || || || |||||||||||||||||| |||| || |||||
Sbjct: 22210937 caagatcgtccggtttactctgtttttcttttgctgcagctgc 22210979



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                                
Query: 209      ctttgaacattcatgtcccgttcattcttctcagccagagcttttgcc 256
                |||||||| | ||| |||||||||||||| |||||||| |||||||||
Sbjct: 22210234 ctttgaacctgcatatcccgttcattcttttcagccagggcttttgcc 22210281
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  129 bits (65), Expect = 1e-26
 Identities = 92/101 (91%)
 Strand = Plus / Plus

                                                                            
Query: 255      ccgctcgttcacgggtccgttgatgccgctccaacctagcacgtcttctctcttcactct 314
                |||||||||||||||||| ||||||||| || ||||||||||||||||| ||||||||||
Sbjct: 22138817 ccgctcgttcacgggtcctttgatgccgttcgaacctagcacgtcttctttcttcactct 22138876

                                                         
Query: 315      ctccttcaaccgcttgaaattcatcagatgacgtgggagct 355
                |||||||||   |||||||||| |||||||| |||||||||
Sbjct: 22138877 ctccttcaatttcttgaaattcttcagatgatgtgggagct 22138917



 Score =  115 bits (58), Expect = 2e-22
 Identities = 96/108 (88%), Gaps = 3/108 (2%)
 Strand = Plus / Plus

                                                                            
Query: 354      ctcctccaaatatcgcagataggtcatctgcaaaatttgttgtagatgatgcctttcgca 413
                ||||||||||||| ||||||||||||||||||| ||||||||| ||||||||||| ||||
Sbjct: 22139014 ctcctccaaatattgcagataggtcatctgcaatatttgttgttgatgatgccttccgca 22139073

                                                                
Query: 414      tagatgatgctgaagcagtggttgctgcccctctactttgactttgag 461
                ||   |||||||||||||  | ||||||||||||| ||||| ||||||
Sbjct: 22139074 ta---gatgctgaagcagaagatgctgcccctctattttgagtttgag 22139118



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 87/103 (84%)
 Strand = Plus / Plus

                                                                            
Query: 480      ctgttggagccctttgcttaggtgcgctgtttgctcgggtacccataccaaaaaaggact 539
                ||||||||||||||||||| || || || || ||||| |  ||||||||||| |||||||
Sbjct: 22139222 ctgttggagccctttgcttcggcgcactattggctcgagctcccataccaaagaaggact 22139281

                                                           
Query: 540      cgaggtcatctggtttactctgtttttctcttgccgctgctgc 582
                | || || || |||||||||||||||||| |||| || |||||
Sbjct: 22139282 caagatcgtccggtttactctgtttttcttttgctgcagctgc 22139324



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                                
Query: 209      ctttgaacattcatgtcccgttcattcttctcagccagagcttttgcc 256
                |||||||| | ||| |||||||||||||| |||||||| |||||||||
Sbjct: 22138579 ctttgaacctgcatatcccgttcattcttttcagccagggcttttgcc 22138626
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>emb|AL731742.3|CNS08C7R Oryza sativa chromosome 12, . BAC OJ1123_B09 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 155585

 Score =  129 bits (65), Expect = 1e-26
 Identities = 92/101 (91%)
 Strand = Plus / Minus

                                                                         
Query: 255   ccgctcgttcacgggtccgttgatgccgctccaacctagcacgtcttctctcttcactct 314
             |||||||||||||||||| ||||||||| || ||||||||||||||||| ||||||||||
Sbjct: 42538 ccgctcgttcacgggtcctttgatgccgttcgaacctagcacgtcttctttcttcactct 42479

                                                      
Query: 315   ctccttcaaccgcttgaaattcatcagatgacgtgggagct 355
             |||||||||   |||||||||| |||||||| |||||||||
Sbjct: 42478 ctccttcaatttcttgaaattcttcagatgatgtgggagct 42438



 Score =  115 bits (58), Expect = 2e-22
 Identities = 96/108 (88%), Gaps = 3/108 (2%)
 Strand = Plus / Minus

                                                                         
Query: 354   ctcctccaaatatcgcagataggtcatctgcaaaatttgttgtagatgatgcctttcgca 413
             ||||||||||||| ||||||||||||||||||| ||||||||| ||||||||||| ||||
Sbjct: 42341 ctcctccaaatattgcagataggtcatctgcaatatttgttgttgatgatgccttccgca 42282

                                                             
Query: 414   tagatgatgctgaagcagtggttgctgcccctctactttgactttgag 461
             ||   |||||||||||||  | ||||||||||||| ||||| ||||||
Sbjct: 42281 ta---gatgctgaagcagaagatgctgcccctctattttgagtttgag 42237



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 87/103 (84%)
 Strand = Plus / Minus

                                                                         
Query: 480   ctgttggagccctttgcttaggtgcgctgtttgctcgggtacccataccaaaaaaggact 539
             ||||||||||||||||||| || || || || ||||| |  ||||||||||| |||||||
Sbjct: 42133 ctgttggagccctttgcttcggcgcactattggctcgagctcccataccaaagaaggact 42074

                                                        
Query: 540   cgaggtcatctggtttactctgtttttctcttgccgctgctgc 582
             | || || || |||||||||||||||||| |||| || |||||
Sbjct: 42073 caagatcgtccggtttactctgtttttcttttgctgcagctgc 42031



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                             
Query: 209   ctttgaacattcatgtcccgttcattcttctcagccagagcttttgcc 256
             |||||||| | ||| |||||||||||||| |||||||| |||||||||
Sbjct: 42776 ctttgaacctgcatatcccgttcattcttttcagccagggcttttgcc 42729
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>gb|AC146592.1| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
            OSJNBa0010P23 PCR product, complete sequence
          Length = 19234

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 79/91 (86%)
 Strand = Plus / Minus

                                                                        
Query: 255  ccgctcgttcacgggtccgttgatgccgctccaacctagcacgtcttctctcttcactct 314
            ||||||||||||||||||  ||||| || || || |||||||||||||| ||||||||||
Sbjct: 8493 ccgctcgttcacgggtcctctgatggcgttctaatctagcacgtcttctttcttcactct 8434

                                           
Query: 315  ctccttcaaccgcttgaaattcatcagatga 345
            |||| |||||  |||| ||| ||||||||||
Sbjct: 8433 ctccctcaacttcttggaatacatcagatga 8403



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 32/33 (96%)
 Strand = Plus / Minus

                                             
Query: 224  tcccgttcattcttctcagccagagcttttgcc 256
            |||||||| ||||||||||||||||||||||||
Sbjct: 8711 tcccgttcgttcttctcagccagagcttttgcc 8679



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 77/94 (81%)
 Strand = Plus / Minus

                                                                        
Query: 477  ccactgttggagccctttgcttaggtgcgctgtttgctcgggtacccataccaaaaaagg 536
            |||||||||||| ||| ||||| || || || |||||||||| ||||  |||||| || |
Sbjct: 8072 ccactgttggagtcctctgctttggcgcactatttgctcgggcacccgcaccaaagaaag 8013

                                              
Query: 537  actcgaggtcatctggtttactctgtttttctct 570
            |||| || ||||||| |   ||||||||||||||
Sbjct: 8012 actcaagatcatctgctgagctctgtttttctct 7979
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 79/91 (86%)
 Strand = Plus / Minus

                                                                            
Query: 255      ccgctcgttcacgggtccgttgatgccgctccaacctagcacgtcttctctcttcactct 314
                ||||||||||||||||||  ||||| || || || |||||||||||||| ||||||||||
Sbjct: 25678283 ccgctcgttcacgggtcctctgatggcgttctaatctagcacgtcttctttcttcactct 25678224

                                               
Query: 315      ctccttcaaccgcttgaaattcatcagatga 345
                |||| |||||  |||| ||| ||||||||||
Sbjct: 25678223 ctccctcaacttcttggaatacatcagatga 25678193



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 32/33 (96%)
 Strand = Plus / Minus

                                                 
Query: 224      tcccgttcattcttctcagccagagcttttgcc 256
                |||||||| ||||||||||||||||||||||||
Sbjct: 25678501 tcccgttcgttcttctcagccagagcttttgcc 25678469



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 77/94 (81%)
 Strand = Plus / Minus

                                                                            
Query: 477      ccactgttggagccctttgcttaggtgcgctgtttgctcgggtacccataccaaaaaagg 536
                |||||||||||| ||| ||||| || || || |||||||||| ||||  |||||| || |
Sbjct: 25677862 ccactgttggagtcctctgctttggcgcactatttgctcgggcacccgcaccaaagaaag 25677803

                                                  
Query: 537      actcgaggtcatctggtttactctgtttttctct 570
                |||| || ||||||| |   ||||||||||||||
Sbjct: 25677802 actcaagatcatctgctgagctctgtttttctct 25677769
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 79/91 (86%)
 Strand = Plus / Minus

                                                                            
Query: 255      ccgctcgttcacgggtccgttgatgccgctccaacctagcacgtcttctctcttcactct 314
                ||||||||||||||||||  ||||| || || || |||||||||||||| ||||||||||
Sbjct: 25996953 ccgctcgttcacgggtcctctgatggcgttctaatctagcacgtcttctttcttcactct 25996894

                                               
Query: 315      ctccttcaaccgcttgaaattcatcagatga 345
                |||| |||||  |||| ||| ||||||||||
Sbjct: 25996893 ctccctcaacttcttggaatacatcagatga 25996863



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 32/33 (96%)
 Strand = Plus / Minus

                                                 
Query: 224      tcccgttcattcttctcagccagagcttttgcc 256
                |||||||| ||||||||||||||||||||||||
Sbjct: 25997171 tcccgttcgttcttctcagccagagcttttgcc 25997139



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 77/94 (81%)
 Strand = Plus / Minus

                                                                            
Query: 477      ccactgttggagccctttgcttaggtgcgctgtttgctcgggtacccataccaaaaaagg 536
                |||||||||||| ||| ||||| || || || |||||||||| ||||  |||||| || |
Sbjct: 25996532 ccactgttggagtcctctgctttggcgcactatttgctcgggcacccgcaccaaagaaag 25996473

                                                  
Query: 537      actcgaggtcatctggtttactctgtttttctct 570
                |||| || ||||||| |   ||||||||||||||
Sbjct: 25996472 actcaagatcatctgctgagctctgtttttctct 25996439
to top
>gb|AY112017.1| Zea mays CL3093_1 mRNA sequence
          Length = 1017

 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 63/70 (90%)
 Strand = Plus / Plus

                                                                       
Query: 227 cgttcattcttctcagccagagcttttgccgctcgttcacgggtccgttgatgccgctcc 286
           ||||||||||||||||||||||||||||||||||||||||| |||   ||||| || || 
Sbjct: 776 cgttcattcttctcagccagagcttttgccgctcgttcacgagtcatctgatgacgttct 835

                     
Query: 287 aacctagcac 296
           ||||||||||
Sbjct: 836 aacctagcac 845
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>gb|AC141112.7| Medicago truncatula clone mth2-15m12, complete sequence
          Length = 135248

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                               
Query: 223   gtcccgttcattcttctcagccagagcttttgcc 256
             |||||||| ||||||||||||||  |||||||||
Sbjct: 42303 gtcccgttgattcttctcagccaatgcttttgcc 42270
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>gb|AC009299.5| Homo sapiens BAC clone RP11-26B22 from 2, complete sequence
          Length = 169697

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 414    tagatgatgctgaagcagtggt 435
              ||||||||||||||||||||||
Sbjct: 122527 tagatgatgctgaagcagtggt 122548
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>emb|BX001024.7| Zebrafish DNA sequence from clone CH211-42I24, complete sequence
          Length = 169194

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 301    tctctcttcactctctccttca 322
              ||||||||||||||||||||||
Sbjct: 147137 tctctcttcactctctccttca 147116
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>emb|AL954373.12| Zebrafish DNA sequence from clone DKEY-48F17 in linkage group 5,
            complete sequence
          Length = 220092

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 301  tctctcttcactctctccttca 322
            ||||||||||||||||||||||
Sbjct: 4962 tctctcttcactctctccttca 4983
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>ref|NM_193971.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2268

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 230  tcattcttctcagccagagcttttgccgc 258
            ||||| |||||||| ||||||||||||||
Sbjct: 1850 tcatttttctcagcaagagcttttgccgc 1822



 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 299  cttctctcttcactctctcc 318
            ||||||||||||||||||||
Sbjct: 1781 cttctctcttcactctctcc 1762
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>emb|Z71183.2|HSN28H9 Human DNA sequence from clone LL22NC03-28H9 on chromosome 22 Contains
            the 3' end of the FBXO7 gene for F-box protein 7 and the
            3' end of the SYN3 gene for Synapsin III, complete
            sequence
          Length = 28900

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 385  aaaatttgttgtagatgatgc 405
            |||||||||||||||||||||
Sbjct: 4794 aaaatttgttgtagatgatgc 4814
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>gb|AC155721.7| Mus musculus 6 BAC RP24-186O21 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 180652

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 301    tctctcttcactctctccttcaacc 325
              |||||||||||||||||||| ||||
Sbjct: 118323 tctctcttcactctctcctttaacc 118299
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>emb|BX648644.1|HSM808795 Homo sapiens mRNA; cDNA DKFZp686B08113 (from clone DKFZp686B08113)
          Length = 5936

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 385  aaaatttgttgtagatgatgc 405
            |||||||||||||||||||||
Sbjct: 4856 aaaatttgttgtagatgatgc 4876
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>emb|AL606472.13| Mouse DNA sequence from clone RP23-66B21 on chromosome 13 Contains the
             V1rh18 gene for vomeronasal 1 receptor H18 and six
             vomeronasal 1 receptor I (V1ri) pseudogenes, complete
             sequence
          Length = 130721

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 301   tctctcttcactctctccttcaacc 325
             ||||||||| |||||||||||||||
Sbjct: 41335 tctctcttctctctctccttcaacc 41311
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>gb|AC145335.15| Pan troglodytes clone rp43-26k12, complete sequence
          Length = 208895

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 385    aaaatttgttgtagatgatgc 405
              |||||||||||||||||||||
Sbjct: 108644 aaaatttgttgtagatgatgc 108624
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>dbj|AK054739.1| Homo sapiens cDNA FLJ30177 fis, clone BRACE2001065
          Length = 2203

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 385  aaaatttgttgtagatgatgc 405
            |||||||||||||||||||||
Sbjct: 1161 aaaatttgttgtagatgatgc 1181
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>gb|AC159214.2| Pan troglodytes BAC clone CH251-522M3 from chromosome unknown, complete
              sequence
          Length = 190101

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 385    aaaatttgttgtagatgatgc 405
              |||||||||||||||||||||
Sbjct: 144530 aaaatttgttgtagatgatgc 144510
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>gb|AC018634.3|AC018634 Human Chromosome 7 clone RP11-243E12, complete sequence
          Length = 174241

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 298   tcttctctcttcactctctccttca 322
             |||||||||||| ||||||||||||
Sbjct: 89743 tcttctctcttccctctctccttca 89719
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>emb|BX648220.1|HSM808368 Homo sapiens mRNA; cDNA DKFZp686K179 (from clone DKFZp686K179)
          Length = 6860

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 385  aaaatttgttgtagatgatgc 405
            |||||||||||||||||||||
Sbjct: 5791 aaaatttgttgtagatgatgc 5811
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>emb|BX648151.1|HSM808298 Homo sapiens mRNA; cDNA DKFZp686J179 (from clone DKFZp686J179)
          Length = 6875

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 385  aaaatttgttgtagatgatgc 405
            |||||||||||||||||||||
Sbjct: 5795 aaaatttgttgtagatgatgc 5815
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>dbj|AK100317.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023078P09, full
            insert sequence
          Length = 3375

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 230  tcattcttctcagccagagcttttgccgc 258
            ||||| |||||||| ||||||||||||||
Sbjct: 2616 tcatttttctcagcaagagcttttgccgc 2588



 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 299  cttctctcttcactctctcc 318
            ||||||||||||||||||||
Sbjct: 2547 cttctctcttcactctctcc 2528
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>emb|AL590502.12| Human DNA sequence from clone RP11-144G16 on chromosome 10, complete
             sequence
          Length = 175583

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 302   ctctcttcactctctccttcaaccg 326
             |||||||||||||| ||||||||||
Sbjct: 29309 ctctcttcactctccccttcaaccg 29333
to top
>gb|AC153908.2| Mus musculus 6 BAC RP23-190K19 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 201588

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 301    tctctcttcactctctccttcaacc 325
              |||||||||||||||||||| ||||
Sbjct: 174287 tctctcttcactctctcctttaacc 174263
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>ref|NM_115927.4| Arabidopsis thaliana transcription factor AT3G60630 mRNA, complete
            cds
          Length = 2244

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 304  ctcttcactctctccttcaa 323
            ||||||||||||||||||||
Sbjct: 1146 ctcttcactctctccttcaa 1165
to top
>gb|AC111126.16| Mus musculus chromosome 5, clone RP23-336F4, complete sequence
          Length = 236880

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 297    gtcttctctcttcactctct 316
              ||||||||||||||||||||
Sbjct: 105126 gtcttctctcttcactctct 105107
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>gb|AY596598.1| Saccharum officinarum clone SCCCCL3001E12, complete sequence
          Length = 1052

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 186 tcagcggggccgtggtagtttctc 209
           ||||| ||||||||||||||||||
Sbjct: 736 tcagctgggccgtggtagtttctc 713
to top
>ref|XM_753059.1| Ustilago maydis 521 hypothetical protein (UM02005.1) partial mRNA
          Length = 1899

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 298  tcttctctcttcactctctc 317
            ||||||||||||||||||||
Sbjct: 1740 tcttctctcttcactctctc 1721
to top
>gb|AC134528.6| Mus musculus BAC clone RP24-502G8 from chromosome 10, complete sequence
          Length = 166393

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 557   ctctgtttttctcttgccgctgct 580
             |||||||||| |||||||||||||
Sbjct: 26981 ctctgtttttttcttgccgctgct 27004
to top
>emb|AL158837.14| Human DNA sequence from clone RP11-102C16 on chromosome 1 Contains
           the gene for a novel protein (FLJ14904, FLJ29032,
           DKFZp434L0217), a novel gene, the GPA33 gene for
           glycoprotein A33 (transmembrane), the gene for novel
           protein (FLJ37495) and three CpG islands, complete
           sequence
          Length = 148849

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 301 tctctcttcactctctcctt 320
           ||||||||||||||||||||
Sbjct: 110 tctctcttcactctctcctt 129
to top
>gb|AY096372.1| Arabidopsis thaliana putative scarecrow protein (At3g60630) mRNA,
           complete cds
          Length = 1903

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 304 ctcttcactctctccttcaa 323
           ||||||||||||||||||||
Sbjct: 905 ctcttcactctctccttcaa 924
to top
>gb|AY064062.1| Arabidopsis thaliana putative scarecrow protein (At3g60630) mRNA,
            complete cds
          Length = 2156

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 304  ctcttcactctctccttcaa 323
            ||||||||||||||||||||
Sbjct: 1047 ctcttcactctctccttcaa 1066
to top
>gb|AC092993.3| Homo sapiens 3 BAC RP11-649C16 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 147859

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 404   gcctttcgcatagatgatgctgaa 427
             ||||||||||||| ||||||||||
Sbjct: 78365 gcctttcgcatagttgatgctgaa 78342
to top
>gb|AC182490.3| Pan troglodytes BAC clone CH251-430P12 from chromosome 2, complete
              sequence
          Length = 158411

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 299    cttctctcttcactctctccttca 322
              ||||||||||| ||||||||||||
Sbjct: 149180 cttctctcttccctctctccttca 149157
to top
>gb|AC120781.23| Pan troglodytes clone rp43-28m17, complete sequence
          Length = 184706

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 299   cttctctcttcactctctccttca 322
             ||||||||||| ||||||||||||
Sbjct: 34048 cttctctcttccctctctccttca 34025
to top
>dbj|AK084052.1| Mus musculus 12 days embryo spinal ganglion cDNA, RIKEN full-length
           enriched library, clone:D130079N20
           product:unclassifiable, full insert sequence
          Length = 3371

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 297 gtcttctctcttcactctct 316
           ||||||||||||||||||||
Sbjct: 801 gtcttctctcttcactctct 820
to top
>ref|XM_392899.2| PREDICTED: Apis mellifera similar to ENSANGP00000014839 (LOC409384),
            mRNA
          Length = 2082

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 421  tgctgaagcagtggttgctg 440
            ||||||||||||||||||||
Sbjct: 1709 tgctgaagcagtggttgctg 1728
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 299      cttctctcttcactctctcc 318
                ||||||||||||||||||||
Sbjct: 14281880 cttctctcttcactctctcc 14281899
to top
>emb|BX823015.1|CNS0A7F6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB80ZC11 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 2199

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 304  ctcttcactctctccttcaa 323
            ||||||||||||||||||||
Sbjct: 1145 ctcttcactctctccttcaa 1164
to top
>gb|AC154554.2| Mus musculus BAC clone RP23-416P6 from chromosome 13, complete sequence
          Length = 204294

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 140   aaaacacatgcacttcccaa 159
             ||||||||||||||||||||
Sbjct: 50261 aaaacacatgcacttcccaa 50242
to top
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 240     cagccagagcttttgccgctcgttcacg 267
               ||||||| |||| |||||||||||||||
Sbjct: 4950854 cagccagcgcttctgccgctcgttcacg 4950827
to top
>gb|AC115927.10| Mus musculus chromosome 1, clone RP24-529H22, complete sequence
          Length = 143911

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 301   tctctcttcactctctcctt 320
             ||||||||||||||||||||
Sbjct: 16038 tctctcttcactctctcctt 16019
to top
>dbj|AP003207.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1157F09
          Length = 148802

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 299   cttctctcttcactctctcc 318
             ||||||||||||||||||||
Sbjct: 33157 cttctctcttcactctctcc 33176
to top
>dbj|AP002870.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0458A05
          Length = 120593

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 299   cttctctcttcactctctcc 318
             ||||||||||||||||||||
Sbjct: 77570 cttctctcttcactctctcc 77589
to top
>emb|AJ326677.1|HSA326677 Homo sapiens genomic sequence surrounding NotI site, clone
           NL4-BG11C
          Length = 622

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 453 gactttgagcattaaacgta 472
           ||||||||||||||||||||
Sbjct: 229 gactttgagcattaaacgta 248
to top
>emb|BX255967.4| Zebrafish DNA sequence from clone CH211-191G22 in linkage group 7,
             complete sequence
          Length = 146969

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 298   tcttctctcttcactctctc 317
             ||||||||||||||||||||
Sbjct: 92028 tcttctctcttcactctctc 92009
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>gb|AY108813.1| Zea mays PCO104391 mRNA sequence
          Length = 907

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 186 tcagcggggccgtggtagtttctc 209
           ||||| ||||||||||||||||||
Sbjct: 673 tcagctgggccgtggtagtttctc 650
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>emb|AL162295.1|ATT4C21 Arabidopsis thaliana DNA chromosome 3, BAC clone T4C21
          Length = 107865

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 304   ctcttcactctctccttcaa 323
             ||||||||||||||||||||
Sbjct: 12721 ctcttcactctctccttcaa 12702
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>dbj|AP006101.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT09A07, TM0181,
             complete sequence
          Length = 185320

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 526   accaaaaaaggactcgaggt 545
             ||||||||||||||||||||
Sbjct: 91947 accaaaaaaggactcgaggt 91928
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>gb|AC142105.7| Mus musculus BAC clone RP24-240E7 from chromosome 10, complete sequence
          Length = 163869

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 557    ctctgtttttctcttgccgctgct 580
              |||||||||| |||||||||||||
Sbjct: 142406 ctctgtttttttcttgccgctgct 142429


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,854,642
Number of Sequences: 3902068
Number of extensions: 4854642
Number of successful extensions: 88599
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 88353
Number of HSP's gapped (non-prelim): 241
length of query: 584
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 561
effective length of database: 17,143,297,704
effective search space: 9617390011944
effective search space used: 9617390011944
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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