Clone Information

BLAST Search Result

Clone Name	rbasd16f03
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	PMA1_WHEAT (P83970) Plasma membrane ATPase (EC 3.6.3.6) (Proton ...	153	2e-37
2	PMA4_NICPL (Q03194) Plasma membrane ATPase 4 (EC 3.6.3.6) (Proto...	120	1e-27
3	PMA9_ARATH (Q42556) ATPase 9, plasma membrane-type (EC 3.6.3.6) ...	116	3e-26
4	PMA5_ARATH (Q9SJB3) ATPase 5, plasma membrane-type (EC 3.6.3.6) ...	114	8e-26
5	PMA1_ARATH (P20649) ATPase 1, plasma membrane-type (EC 3.6.3.6) ...	114	8e-26
6	PMA2_ARATH (P19456) ATPase 2, plasma membrane-type (EC 3.6.3.6) ...	112	4e-25
7	PMA6_ARATH (Q9SH76) ATPase 6, plasma membrane-type (EC 3.6.3.6) ...	110	1e-24
8	PMA8_ARATH (Q9M2A0) ATPase 8, plasma membrane-type (EC 3.6.3.6) ...	109	3e-24
9	PMA11_ARATH (Q9LV11) ATPase 11, plasma membrane-type (EC 3.6.3.6...	96	6e-24
10	PMA3_ARATH (P20431) ATPase 3, plasma membrane-type (EC 3.6.3.6) ...	105	4e-23
11	PMA3_NICPL (Q08436) Plasma membrane ATPase 3 (EC 3.6.3.6) (Proto...	99	6e-21
12	PMA1_LYCES (P22180) Plasma membrane ATPase 1 (EC 3.6.3.6) (Proto...	97	2e-20
13	PMA1_NICPL (Q08435) Plasma membrane ATPase 1 (EC 3.6.3.6) (Proto...	96	3e-20
14	PMA4_ARATH (Q9SU58) ATPase 4, plasma membrane-type (EC 3.6.3.6) ...	95	9e-20
15	PMA2_LYCES (P23980) Plasma membrane ATPase 2 (EC 3.6.3.6) (Proto...	93	3e-19
16	PMA7_ARATH (Q9LY32) ATPase 7, plasma membrane-type (EC 3.6.3.6) ...	78	8e-15
17	PMA10_ARATH (Q43128) ATPase 10, plasma membrane-type (EC 3.6.3.6...	45	6e-05
18	PMA_AVESA (Q7M290) Plasma membrane ATPase (EC 3.6.3.6) (Proton p...	43	4e-04
19	CING_HUMAN (Q9P2M7) Cingulin	37	0.022
20	CING_MOUSE (P59242) Cingulin	31	1.2
21	VID21_NEUCR (Q7SBU6) Chromatin modification-related protein vid-21	31	1.6
22	TIM_MOUSE (Q9R1X4) Timeless homolog (mTim)	30	2.0
23	BRE1_CAEEL (P34537) Ubiquitin-protein ligase bre-1 (EC 6.3.2.-) ...	30	2.0
24	SMG_DROME (Q23972) Protein Smaug	30	2.7
25	RNH2_SYNP7 (Q31PW0) Ribonuclease HII (EC 3.1.26.4) (RNase HII)	30	3.5
26	RNH2_SYNP6 (Q5N4B8) Ribonuclease HII (EC 3.1.26.4) (RNase HII)	30	3.5
27	BRE1_CAEBR (Q60YN5) Ubiquitin-protein ligase bre-1 (EC 6.3.2.-) ...	29	4.5
28	ASPP2_HUMAN (Q13625) Apoptosis-stimulating of p53 protein 2 (Tum...	28	7.7
29	DPO3_LACPL (Q88VK2) DNA polymerase III polC-type (EC 2.7.7.7) (P...	28	7.7
30	FABPE_HUMAN (Q01469) Fatty acid-binding protein, epidermal (E-FA...	28	7.7
31	RSRC1_RAT (Q5PPJ2) Arginine/serine-rich coiled coil protein 1	28	7.7
32	MRP2_RAT (Q63120) Canalicular multispecific organic anion transp...	28	7.7

>PMA1_WHEAT (P83970) Plasma membrane ATPase (EC 3.6.3.6) (Proton pump)|
          Length = 951

 Score =  153 bits (386), Expect = 2e-37
 Identities = 76/83 (91%), Positives = 78/83 (93%)
 Frame = -3

Query: 443  KTAFTTKENYGKGEREAQWXTAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQAKRRA 264
            KTAFTTKENYGKGEREAQW TAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQAKRRA
Sbjct: 857  KTAFTTKENYGKGEREAQWATAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQAKRRA 916

Query: 263  EIARLRELNTLKGHVEXRGEAQG 195
            EIARLRELNTLKGHVE   + +G
Sbjct: 917  EIARLRELNTLKGHVESVVKLKG 939



 Score = 42.0 bits (97), Expect = 7e-04
 Identities = 19/24 (79%), Positives = 21/24 (87%)
 Frame = -1

Query: 229 RGTLSXVVKLKGLDIDTINQNYTV 158
           +G +  VVKLKGLDIDTINQNYTV
Sbjct: 928 KGHVESVVKLKGLDIDTINQNYTV 951

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>PMA4_NICPL (Q03194) Plasma membrane ATPase 4 (EC 3.6.3.6) (Proton pump 4)|
          Length = 952

 Score =  120 bits (302), Expect = 1e-27
 Identities = 62/83 (74%), Positives = 71/83 (85%)
 Frame = -3

Query: 443  KTAFTTKENYGKGEREAQWXTAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQAKRRA 264
            KTAFTTK++YGK EREAQW  AQRTLHGLQ PE  +  LFN+K+SYRELSEIAEQAKRRA
Sbjct: 860  KTAFTTKKDYGKEEREAQWALAQRTLHGLQPPEATN--LFNEKNSYRELSEIAEQAKRRA 917

Query: 263  EIARLRELNTLKGHVEXRGEAQG 195
            E+ARLREL+TLKGHVE   + +G
Sbjct: 918  EMARLRELHTLKGHVESVVKLKG 940



 Score = 36.2 bits (82), Expect = 0.037
 Identities = 16/24 (66%), Positives = 20/24 (83%)
 Frame = -1

Query: 229  RGTLSXVVKLKGLDIDTINQNYTV 158
            +G +  VVKLKGLDI+TI Q+YTV
Sbjct: 929  KGHVESVVKLKGLDIETIQQHYTV 952

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>PMA9_ARATH (Q42556) ATPase 9, plasma membrane-type (EC 3.6.3.6) (Proton pump 9)|
          Length = 954

 Score =  116 bits (290), Expect = 3e-26
 Identities = 58/83 (69%), Positives = 70/83 (84%)
 Frame = -3

Query: 443  KTAFTTKENYGKGEREAQWXTAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQAKRRA 264
            KTAFT+K++YGKGEREAQW  AQRTLHGLQ  + +   +FNDKS+YRELSEIA+QAKRRA
Sbjct: 862  KTAFTSKKDYGKGEREAQWAQAQRTLHGLQPAQTSD--MFNDKSTYRELSEIADQAKRRA 919

Query: 263  EIARLRELNTLKGHVEXRGEAQG 195
            E+ARLRE +TLKGHVE   + +G
Sbjct: 920  EVARLRERHTLKGHVESVVKQKG 942



 Score = 30.8 bits (68), Expect = 1.6
 Identities = 13/24 (54%), Positives = 18/24 (75%)
 Frame = -1

Query: 229  RGTLSXVVKLKGLDIDTINQNYTV 158
            +G +  VVK KGLDI+ I Q+YT+
Sbjct: 931  KGHVESVVKQKGLDIEAIQQHYTL 954

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>PMA5_ARATH (Q9SJB3) ATPase 5, plasma membrane-type (EC 3.6.3.6) (Proton pump 5)|
          Length = 948

 Score =  114 bits (286), Expect = 8e-26
 Identities = 57/83 (68%), Positives = 68/83 (81%)
 Frame = -3

Query: 443  KTAFTTKENYGKGEREAQWXTAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQAKRRA 264
            KTAFTTK++YGK EREAQW  AQRTLHGLQ  E   + +FN+K+SY ELS+IAEQAKRRA
Sbjct: 856  KTAFTTKKDYGKEEREAQWAAAQRTLHGLQPAE--KNNIFNEKNSYSELSQIAEQAKRRA 913

Query: 263  EIARLRELNTLKGHVEXRGEAQG 195
            E+ RLRE+NTLKGHVE   + +G
Sbjct: 914  EVVRLREINTLKGHVESVVKLKG 936



 Score = 37.7 bits (86), Expect = 0.013
 Identities = 17/24 (70%), Positives = 20/24 (83%)
 Frame = -1

Query: 229 RGTLSXVVKLKGLDIDTINQNYTV 158
           +G +  VVKLKGLDIDTI Q+YTV
Sbjct: 925 KGHVESVVKLKGLDIDTIQQHYTV 948

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>PMA1_ARATH (P20649) ATPase 1, plasma membrane-type (EC 3.6.3.6) (Proton pump 1)|
          Length = 948

 Score =  114 bits (286), Expect = 8e-26
 Identities = 59/83 (71%), Positives = 68/83 (81%)
 Frame = -3

Query: 443  KTAFTTKENYGKGEREAQWXTAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQAKRRA 264
            +TAFTTK++YG GEREAQW  AQRTLHGLQ  E  +  +F +K SYRELSEIAEQAKRRA
Sbjct: 856  RTAFTTKKDYGIGEREAQWAQAQRTLHGLQPKEDVN--IFPEKGSYRELSEIAEQAKRRA 913

Query: 263  EIARLRELNTLKGHVEXRGEAQG 195
            EIARLREL+TLKGHVE   + +G
Sbjct: 914  EIARLRELHTLKGHVESVAKLKG 936



 Score = 32.3 bits (72), Expect = 0.53
 Identities = 14/24 (58%), Positives = 17/24 (70%)
 Frame = -1

Query: 229 RGTLSXVVKLKGLDIDTINQNYTV 158
           +G +  V KLKGLDIDT   +YTV
Sbjct: 925 KGHVESVAKLKGLDIDTAGHHYTV 948

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>PMA2_ARATH (P19456) ATPase 2, plasma membrane-type (EC 3.6.3.6) (Proton pump 2)|
          Length = 947

 Score =  112 bits (280), Expect = 4e-25
 Identities = 59/83 (71%), Positives = 67/83 (80%)
 Frame = -3

Query: 443  KTAFTTKENYGKGEREAQWXTAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQAKRRA 264
            KTAFT K++YGK EREAQW  AQRTLHGLQ  E  +  +F +K SYRELSEIAEQAKRRA
Sbjct: 856  KTAFTMKKDYGKEEREAQWALAQRTLHGLQPKEAVN--IFPEKGSYRELSEIAEQAKRRA 913

Query: 263  EIARLRELNTLKGHVEXRGEAQG 195
            EIARLREL+TLKGHVE   + +G
Sbjct: 914  EIARLRELHTLKGHVESVVKLKG 936

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>PMA6_ARATH (Q9SH76) ATPase 6, plasma membrane-type (EC 3.6.3.6) (Proton pump 6)|
          Length = 949

 Score =  110 bits (276), Expect = 1e-24
 Identities = 54/83 (65%), Positives = 69/83 (83%)
 Frame = -3

Query: 443  KTAFTTKENYGKGEREAQWXTAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQAKRRA 264
            +TAFTTK++YG+GEREAQW  AQRTLHGL+ PE    ++F D ++Y ELSEIAEQAK+RA
Sbjct: 859  RTAFTTKKDYGRGEREAQWALAQRTLHGLKPPE----SMFEDTATYTELSEIAEQAKKRA 914

Query: 263  EIARLRELNTLKGHVEXRGEAQG 195
            E+ARLRE++TLKGHVE   + +G
Sbjct: 915  EVARLREVHTLKGHVESVVKLKG 937



 Score = 38.5 bits (88), Expect = 0.007
 Identities = 31/89 (34%), Positives = 46/89 (51%), Gaps = 2/89 (2%)
 Frame = -1

Query: 418  TTAKVRGRHSGXPHREHSMAFKHLSRL-PTHSSTTRAATVSFLRSLSKPREELRLQG*GS 242
            TT K  GR  G    + ++A + L  L P  S     AT + L  +++  ++        
Sbjct: 863  TTKKDYGR--GEREAQWALAQRTLHGLKPPESMFEDTATYTELSEIAEQAKKRAEVARLR 920

Query: 241  STHS-RGTLSXVVKLKGLDIDTINQNYTV 158
              H+ +G +  VVKLKGLDID +NQ+YTV
Sbjct: 921  EVHTLKGHVESVVKLKGLDIDNLNQHYTV 949

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>PMA8_ARATH (Q9M2A0) ATPase 8, plasma membrane-type (EC 3.6.3.6) (Proton pump 8)|
          Length = 948

 Score =  109 bits (272), Expect = 3e-24
 Identities = 58/83 (69%), Positives = 66/83 (79%)
 Frame = -3

Query: 443  KTAFTTKENYGKGEREAQWXTAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQAKRRA 264
            KTAFTTK++YGKGEREAQW  AQRTLHGL  PE     +FND  +  ELSEIAEQAKRRA
Sbjct: 860  KTAFTTKKDYGKGEREAQWALAQRTLHGLPPPE----AMFNDNKN--ELSEIAEQAKRRA 913

Query: 263  EIARLRELNTLKGHVEXRGEAQG 195
            E+ARLREL+TLKGHVE   + +G
Sbjct: 914  EVARLRELHTLKGHVESVVKLKG 936



 Score = 37.7 bits (86), Expect = 0.013
 Identities = 17/24 (70%), Positives = 20/24 (83%)
 Frame = -1

Query: 229 RGTLSXVVKLKGLDIDTINQNYTV 158
           +G +  VVKLKGLDIDTI Q+YTV
Sbjct: 925 KGHVESVVKLKGLDIDTIQQHYTV 948

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>PMA11_ARATH (Q9LV11) ATPase 11, plasma membrane-type (EC 3.6.3.6) (Proton pump|
            11)
          Length = 956

 Score = 95.5 bits (236), Expect(2) = 6e-24
 Identities = 46/76 (60%), Positives = 62/76 (81%)
 Frame = -3

Query: 443  KTAFTTKENYGKGEREAQWXTAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQAKRRA 264
            + AFT ++++GK +RE QW  AQRTLHGLQAP+     +F +++ + ELS++AE+AKRRA
Sbjct: 865  RVAFTRQKDFGKEQRELQWAHAQRTLHGLQAPDAK---MFPERTHFNELSQMAEEAKRRA 921

Query: 263  EIARLRELNTLKGHVE 216
            EIARLREL+TLKGHVE
Sbjct: 922  EIARLRELHTLKGHVE 937



 Score = 33.9 bits (76), Expect(2) = 6e-24
 Identities = 15/24 (62%), Positives = 19/24 (79%)
 Frame = -1

Query: 229  RGTLSXVVKLKGLDIDTINQNYTV 158
            +G +  VV+LKGLDI+TI Q YTV
Sbjct: 933  KGHVESVVRLKGLDIETIQQAYTV 956

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>PMA3_ARATH (P20431) ATPase 3, plasma membrane-type (EC 3.6.3.6) (Proton pump 3)|
          Length = 948

 Score =  105 bits (263), Expect = 4e-23
 Identities = 56/83 (67%), Positives = 65/83 (78%)
 Frame = -3

Query: 443  KTAFTTKENYGKGEREAQWXTAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQAKRRA 264
            +TAFTTK+NYG  EREAQW  AQRTLHGLQ  E A+  +  ++  YRELSEIA QAKRRA
Sbjct: 857  RTAFTTKQNYGIEEREAQWAHAQRTLHGLQNTETAN--VVPERGGYRELSEIANQAKRRA 914

Query: 263  EIARLRELNTLKGHVEXRGEAQG 195
            EIARLREL+TLKGHVE   + +G
Sbjct: 915  EIARLRELHTLKGHVESVVKLKG 937

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>PMA3_NICPL (Q08436) Plasma membrane ATPase 3 (EC 3.6.3.6) (Proton pump 3)|
          Length = 956

 Score = 98.6 bits (244), Expect = 6e-21
 Identities = 47/83 (56%), Positives = 66/83 (79%)
 Frame = -3

Query: 443  KTAFTTKENYGKGEREAQWXTAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQAKRRA 264
            + AFT K+++GK +RE QW  AQRTLHGLQ P+P    +F++ +++ EL+++AE+AKRRA
Sbjct: 865  RIAFTRKKDFGKEQRELQWAHAQRTLHGLQVPDPK---IFSETTNFNELNQLAEEAKRRA 921

Query: 263  EIARLRELNTLKGHVEXRGEAQG 195
            EIARLREL+TLKGHVE   + +G
Sbjct: 922  EIARLRELHTLKGHVESVVKLKG 944



 Score = 36.2 bits (82), Expect = 0.037
 Identities = 34/94 (36%), Positives = 47/94 (50%), Gaps = 9/94 (9%)
 Frame = -1

Query: 412  AKVRGRHSGXPHRE----HSMAFKHLSRLPT---HSSTTRAATVSFLRSLSKPREEL-RL 257
            A  R +  G   RE    H+    H  ++P     S TT    ++ L   +K R E+ RL
Sbjct: 867  AFTRKKDFGKEQRELQWAHAQRTLHGLQVPDPKIFSETTNFNELNQLAEEAKRRAEIARL 926

Query: 256  QG*GSSTHS-RGTLSXVVKLKGLDIDTINQNYTV 158
            +      H+ +G +  VVKLKGLDI+TI Q YTV
Sbjct: 927  R----ELHTLKGHVESVVKLKGLDIETIQQAYTV 956

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>PMA1_LYCES (P22180) Plasma membrane ATPase 1 (EC 3.6.3.6) (Proton pump 1)|
          Length = 956

 Score = 96.7 bits (239), Expect = 2e-20
 Identities = 47/83 (56%), Positives = 65/83 (78%)
 Frame = -3

Query: 443  KTAFTTKENYGKGEREAQWXTAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQAKRRA 264
            + AFT K+++GK  RE QW  AQRTLHGLQ P+P    +F++ +++ EL+++AE+AKRRA
Sbjct: 865  RIAFTRKKDFGKELRELQWAHAQRTLHGLQVPDPK---IFSETTNFNELNQLAEEAKRRA 921

Query: 263  EIARLRELNTLKGHVEXRGEAQG 195
            EIARLREL+TLKGHVE   + +G
Sbjct: 922  EIARLRELHTLKGHVESVVKLKG 944



 Score = 37.0 bits (84), Expect = 0.022
 Identities = 26/59 (44%), Positives = 36/59 (61%), Gaps = 2/59 (3%)
 Frame = -1

Query: 328  SSTTRAATVSFLRSLSKPREEL-RLQG*GSSTHS-RGTLSXVVKLKGLDIDTINQNYTV 158
            S TT    ++ L   +K R E+ RL+      H+ +G +  VVKLKGLDI+TI Q+YTV
Sbjct: 902  SETTNFNELNQLAEEAKRRAEIARLR----ELHTLKGHVESVVKLKGLDIETIQQSYTV 956

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>PMA1_NICPL (Q08435) Plasma membrane ATPase 1 (EC 3.6.3.6) (Proton pump 1)|
          Length = 957

 Score = 96.3 bits (238), Expect = 3e-20
 Identities = 47/83 (56%), Positives = 65/83 (78%)
 Frame = -3

Query: 443  KTAFTTKENYGKGEREAQWXTAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQAKRRA 264
            + AFT K+++GK +RE QW  AQRTLHGLQ P+     LF++ +++ EL+++AE+AKRRA
Sbjct: 866  RIAFTRKKDFGKEQRELQWAHAQRTLHGLQVPDTK---LFSEATNFNELNQLAEEAKRRA 922

Query: 263  EIARLRELNTLKGHVEXRGEAQG 195
            EIARLREL+TLKGHVE   + +G
Sbjct: 923  EIARLRELHTLKGHVESVVKLKG 945



 Score = 36.6 bits (83), Expect = 0.028
 Identities = 34/98 (34%), Positives = 48/98 (48%), Gaps = 9/98 (9%)
 Frame = -1

Query: 424  KRTTAKVRGRHSGXPHRE----HSMAFKHLSRLPTHSSTTRAATVSFLRSLS---KPREE 266
            +R  A  R +  G   RE    H+    H  ++P     + A   + L  L+   K R E
Sbjct: 864  ERRIAFTRKKDFGKEQRELQWAHAQRTLHGLQVPDTKLFSEATNFNELNQLAEEAKRRAE 923

Query: 265  L-RLQG*GSSTHS-RGTLSXVVKLKGLDIDTINQNYTV 158
            + RL+      H+ +G +  VVKLKGLDI+TI Q YTV
Sbjct: 924  IARLR----ELHTLKGHVESVVKLKGLDIETIQQAYTV 957

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>PMA4_ARATH (Q9SU58) ATPase 4, plasma membrane-type (EC 3.6.3.6) (Proton pump 4)|
          Length = 960

 Score = 94.7 bits (234), Expect = 9e-20
 Identities = 46/76 (60%), Positives = 61/76 (80%)
 Frame = -3

Query: 443  KTAFTTKENYGKGEREAQWXTAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQAKRRA 264
            + AFT ++++GK +RE QW  AQRTLHGLQAP+     +F D++   EL+++AE+AKRRA
Sbjct: 869  RVAFTRQKDFGKEQRELQWAHAQRTLHGLQAPDTK---MFTDRTHVSELNQMAEEAKRRA 925

Query: 263  EIARLRELNTLKGHVE 216
            EIARLREL+TLKGHVE
Sbjct: 926  EIARLRELHTLKGHVE 941



 Score = 34.3 bits (77), Expect = 0.14
 Identities = 33/98 (33%), Positives = 47/98 (47%), Gaps = 9/98 (9%)
 Frame = -1

Query: 424  KRTTAKVRGRHSGXPHRE----HSMAFKHLSRLPTHSSTTRAATVSFLRSLS---KPREE 266
            ++  A  R +  G   RE    H+    H  + P     T    VS L  ++   K R E
Sbjct: 867  EQRVAFTRQKDFGKEQRELQWAHAQRTLHGLQAPDTKMFTDRTHVSELNQMAEEAKRRAE 926

Query: 265  L-RLQG*GSSTHS-RGTLSXVVKLKGLDIDTINQNYTV 158
            + RL+      H+ +G +  VV+LKGLDI+TI Q YTV
Sbjct: 927  IARLR----ELHTLKGHVESVVRLKGLDIETIQQAYTV 960

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>PMA2_LYCES (P23980) Plasma membrane ATPase 2 (EC 3.6.3.6) (Proton pump 2)|
           (Fragment)
          Length = 704

 Score = 93.2 bits (230), Expect = 3e-19
 Identities = 46/83 (55%), Positives = 64/83 (77%)
 Frame = -3

Query: 443 KTAFTTKENYGKGEREAQWXTAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQAKRRA 264
           + AFT K+++GK +RE QW  AQRTLHGLQ P+     LF++ +++ EL+++AE+AKRRA
Sbjct: 613 RIAFTRKKDFGKEQRELQWAHAQRTLHGLQVPDIK---LFSEATNFNELNQLAEEAKRRA 669

Query: 263 EIARLRELNTLKGHVEXRGEAQG 195
           EIAR REL+TLKGHVE   + +G
Sbjct: 670 EIARQRELHTLKGHVESVVKLKG 692



 Score = 37.4 bits (85), Expect = 0.017
 Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
 Frame = -1

Query: 379 HREHSMAFKHLSRLPTHSSTTRAATVSFLRSLSKPREELRLQG*GSSTHS-RGTLSXVVK 203
           H + ++    +  +   S  T    ++ L   +K R E+  Q      H+ +G +  VVK
Sbjct: 633 HAQRTLHGLQVPDIKLFSEATNFNELNQLAEEAKRRAEIARQ---RELHTLKGHVESVVK 689

Query: 202 LKGLDIDTINQNYTV 158
           LKGLDI+TI Q+YTV
Sbjct: 690 LKGLDIETIQQSYTV 704

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>PMA7_ARATH (Q9LY32) ATPase 7, plasma membrane-type (EC 3.6.3.6) (Proton pump 7)|
          Length = 961

 Score = 78.2 bits (191), Expect = 8e-15
 Identities = 40/83 (48%), Positives = 57/83 (68%)
 Frame = -3

Query: 443  KTAFTTKENYGKGEREAQWXTAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQAKRRA 264
            +TA T K+N+G+ ER A W T +RT HGL+  +   +    +++S  EL+ +AE+AKRRA
Sbjct: 870  RTALTGKKNFGQEERMAAWATEKRTQHGLETGQKPVY----ERNSATELNNMAEEAKRRA 925

Query: 263  EIARLRELNTLKGHVEXRGEAQG 195
            EIAR+REL TLKG VE   + +G
Sbjct: 926  EIARMRELQTLKGKVESAAKLKG 948

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>PMA10_ARATH (Q43128) ATPase 10, plasma membrane-type (EC 3.6.3.6) (Proton pump|
            10)
          Length = 947

 Score = 45.4 bits (106), Expect = 6e-05
 Identities = 29/76 (38%), Positives = 41/76 (53%)
 Frame = -3

Query: 443  KTAFTTKENYGKGEREAQWXTAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQAKRRA 264
            KTAFT K++YGK +       +QR           S +    + S    S IAEQ +RRA
Sbjct: 864  KTAFTYKKDYGKDDGSPNVTISQR-----------SRSAEELRGSRSRASWIAEQTRRRA 912

Query: 263  EIARLRELNTLKGHVE 216
            EIARL E++++  H+E
Sbjct: 913  EIARLLEVHSVSRHLE 928

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>PMA_AVESA (Q7M290) Plasma membrane ATPase (EC 3.6.3.6) (Proton pump)|
           (Fragments)
          Length = 110

 Score = 42.7 bits (99), Expect = 4e-04
 Identities = 25/36 (69%), Positives = 26/36 (72%)
 Frame = -3

Query: 380 AQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQAK 273
           A +TLHGLQAPE  S  L NDK    ELSEIAEQAK
Sbjct: 79  ALKTLHGLQAPESTSLNLPNDK----ELSEIAEQAK 110

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>CING_HUMAN (Q9P2M7) Cingulin|
          Length = 1197

 Score = 37.0 bits (84), Expect = 0.022
 Identities = 25/61 (40%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
 Frame = -3

Query: 398 EAQWXTAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQAKRRAE---IARLRELNTLK 228
           E Q    Q  L  +Q PEPA   L  D    REL E   + K+R E     R REL  LK
Sbjct: 436 ETQVMELQNKLKHVQGPEPAKEVLLKDLLETRELLEEVLEGKQRVEEQLRLRERELTALK 495

Query: 227 G 225
           G
Sbjct: 496 G 496

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>CING_MOUSE (P59242) Cingulin|
          Length = 1191

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 23/61 (37%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
 Frame = -3

Query: 398 EAQWXTAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQAKRRAE---IARLRELNTLK 228
           EAQ    Q  L   Q+P+    +L  D    REL E   + K+R E     R REL  LK
Sbjct: 430 EAQVKELQLKLKHSQSPDSGKESLLKDLLDTRELLEELLEGKQRVEEQLRLRERELTALK 489

Query: 227 G 225
           G
Sbjct: 490 G 490

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>VID21_NEUCR (Q7SBU6) Chromatin modification-related protein vid-21|
          Length = 2189

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 22/88 (25%), Positives = 39/88 (44%)
 Frame = -3

Query: 431  TTKENYGKGEREAQWXTAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQAKRRAEIAR 252
            T+   Y +  R  Q   AQ+     QAP+PA   L   + +  + +   +Q +  A  A+
Sbjct: 1554 TSPHQYAQLLRAQQQAQAQQAQAQQQAPQPAQSQLTPAQLAQAQAAAAQKQKQAAAAAAQ 1613

Query: 251  LRELNTLKGHVEXRGEAQGP*HRHHQPK 168
             + L       + + + Q P H+ HQP+
Sbjct: 1614 AKVL------AQAQMQTQTPAHQPHQPQ 1635

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>TIM_MOUSE (Q9R1X4) Timeless homolog (mTim)|
          Length = 1197

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 18/60 (30%), Positives = 25/60 (41%), Gaps = 5/60 (8%)
 Frame = -3

Query: 200  QGP*HRHHQPKLH-----RVRNLGIGPNNMTSVLERDWNGAPL*DFYRCMNERNMADTDQ 36
            QGP   H    L      R R  G+GP    +  E +WN AP         +R + D+D+
Sbjct: 1116 QGPSEEHRTEALRALLSARKRKAGLGPTEEEATGEEEWNSAP--------KKRQLLDSDE 1167

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>BRE1_CAEEL (P34537) Ubiquitin-protein ligase bre-1 (EC 6.3.2.-) (RING finger|
           protein rfp-1)
          Length = 837

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 20/78 (25%), Positives = 39/78 (50%)
 Frame = -3

Query: 431 TTKENYGKGEREAQWXTAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQAKRRAEIAR 252
           T KE Y K  ++++W   + TL+ L++    + +L ++K   RE  + ++          
Sbjct: 443 TVKEEYNKTVKQSEWDEMKATLNTLRS---MNRSLKSEKIRLREKDKQSQ---------- 489

Query: 251 LRELNTLKGHVEXRGEAQ 198
            +++NTLK  +    EAQ
Sbjct: 490 -KDINTLKSELTSLKEAQ 506

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>SMG_DROME (Q23972) Protein Smaug|
          Length = 999

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 12/26 (46%), Positives = 18/26 (69%)
 Frame = -3

Query: 173 PKLHRVRNLGIGPNNMTSVLERDWNG 96
           PK+H V+  G+GPNN  ++ +  WNG
Sbjct: 769 PKMHHVKPAGVGPNN-GNINKPRWNG 793

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>RNH2_SYNP7 (Q31PW0) Ribonuclease HII (EC 3.1.26.4) (RNase HII)|
          Length = 215

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 16/48 (33%), Positives = 22/48 (45%)
 Frame = -1

Query: 400 GRHSGXPHREHSMAFKHLSRLPTHSSTTRAATVSFLRSLSKPREELRL 257
           GRH G    +H  A   L   P H        + FLRSL +P +++ L
Sbjct: 174 GRHKGYGTAQHRQAILQLGPTPLH-------RIRFLRSLRQPSQQIDL 214

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>RNH2_SYNP6 (Q5N4B8) Ribonuclease HII (EC 3.1.26.4) (RNase HII)|
          Length = 215

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 16/48 (33%), Positives = 22/48 (45%)
 Frame = -1

Query: 400 GRHSGXPHREHSMAFKHLSRLPTHSSTTRAATVSFLRSLSKPREELRL 257
           GRH G    +H  A   L   P H        + FLRSL +P +++ L
Sbjct: 174 GRHKGYGTAQHRQAILQLGPTPLH-------RIRFLRSLRQPSQQIDL 214

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>BRE1_CAEBR (Q60YN5) Ubiquitin-protein ligase bre-1 (EC 6.3.2.-) (RING finger|
           protein rfp-1)
          Length = 828

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 19/72 (26%), Positives = 34/72 (47%)
 Frame = -3

Query: 431 TTKENYGKGEREAQWXTAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQAKRRAEIAR 252
           T KE Y K  ++++W   + T++ L+       +L     S  +  +  E+A ++   A 
Sbjct: 439 TVKEEYNKTVKQSEWDEMKATVNTLR-------SLNKTMKSQMQRMKDREKASQKEHSAV 491

Query: 251 LRELNTLKGHVE 216
             EL TLK  +E
Sbjct: 492 KTELKTLKDQLE 503

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>ASPP2_HUMAN (Q13625) Apoptosis-stimulating of p53 protein 2 (Tumor suppressor|
           p53-binding protein 2) (p53-binding protein 2) (p53BP2)
           (53BP2) (Bcl2-binding protein) (Bbp) (NY-REN-51 antigen)
          Length = 1128

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 17/63 (26%), Positives = 31/63 (49%)
 Frame = -3

Query: 383 TAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQAKRRAEIARLRELNTLKGHVEXRGE 204
           T ++ L  L+  +        ++   + L EIAE  +     A+L+++  LKGHVE +  
Sbjct: 151 TKEQRLKFLKQQDQRQQQQVAEQEKLKRLKEIAENQE-----AKLKKVRALKGHVEQKRL 205

Query: 203 AQG 195
           + G
Sbjct: 206 SNG 208

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>DPO3_LACPL (Q88VK2) DNA polymerase III polC-type (EC 2.7.7.7) (PolIII)|
          Length = 1437

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
 Frame = -3

Query: 377 QRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQ-AKRRAEIARLRELNTLKGHVEXRGEA 201
           + T H L  P+ + HT+ ++ +S  ++ E  EQ AK    +A+  E    K + + + +A
Sbjct: 145 ESTYHRLGFPKFSVHTMIDESASQAKIKEFHEQKAKSDQALAQKAEAAIKKANEKRQKQA 204

Query: 200 QGP 192
             P
Sbjct: 205 DAP 207

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>FABPE_HUMAN (Q01469) Fatty acid-binding protein, epidermal (E-FABP)|
           (Psoriasis-associated fatty acid-binding protein
           homolog) (PA-FABP)
          Length = 134

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = +2

Query: 14  VALSQLGAGQYQPCFFHSCTGKNLKAELHSNLAPIRMSCCL 136
           +AL ++GA     C   +C GKNL  +  S L   + SC L
Sbjct: 29  IALRKMGAMAKPDCII-TCDGKNLTIKTESTLKTTQFSCTL 68

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>RSRC1_RAT (Q5PPJ2) Arginine/serine-rich coiled coil protein 1|
          Length = 334

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 6/76 (7%)
 Frame = -3

Query: 413 GKGEREAQWXTAQRTLHGLQAPEPASHTLFNDKSSYREL-SEIAEQAKRRAEIARLRELN 237
           GK  R  +  +  RT      P P SH+  +++SS+R   S   ++ +R+      RE  
Sbjct: 91  GKSYRVQRSRSKSRTRRSRSRPRPRSHSRSSERSSHRRTRSRSRDRDRRKVRDKEKREKE 150

Query: 236 TLKG-----HVEXRGE 204
             KG     H   RG+
Sbjct: 151 KDKGKDKEAHTIKRGD 166

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>MRP2_RAT (Q63120) Canalicular multispecific organic anion transporter 1|
            (ATP-binding cassette sub-family C member 2) (Multidrug
            resistance-associated protein 2) (Canalicular multidrug
            resistance protein)
          Length = 1541

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 11/31 (35%), Positives = 20/31 (64%)
 Frame = +2

Query: 131  CLVQCPNSSHGVVLVDGVDVKALELHHGTQR 223
            CL +   S+ G +++DG+DV ++ LH   +R
Sbjct: 1342 CLFRILESAGGQIIIDGIDVASIGLHDLRER 1372


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 63,977,130
Number of Sequences: 219361
Number of extensions: 1221700
Number of successful extensions: 3514
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 3425
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3495
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2618960580
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result