Clone Name | rbasd15p24 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | ZCH10_RAT (Q5EB97) Zinc finger CCHC domain-containing protein 10 | 44 | 4e-04 | 2 | ZCH10_MOUSE (Q9CX48) Zinc finger CCHC domain-containing protein 10 | 44 | 4e-04 | 3 | ZCH10_HUMAN (Q8TBK6) Zinc finger CCHC domain-containing protein 10 | 42 | 0.002 |
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>ZCH10_RAT (Q5EB97) Zinc finger CCHC domain-containing protein 10| Length = 173 Score = 44.3 bits (103), Expect = 4e-04 Identities = 17/24 (70%), Positives = 20/24 (83%) Frame = -3 Query: 719 GHWTYECKNERVYISRPSRTDQLK 648 GHWTYECK +R Y+ RPSRT +LK Sbjct: 30 GHWTYECKGKRKYLHRPSRTAELK 53
>ZCH10_MOUSE (Q9CX48) Zinc finger CCHC domain-containing protein 10| Length = 178 Score = 44.3 bits (103), Expect = 4e-04 Identities = 17/24 (70%), Positives = 20/24 (83%) Frame = -3 Query: 719 GHWTYECKNERVYISRPSRTDQLK 648 GHWTYECK +R Y+ RPSRT +LK Sbjct: 30 GHWTYECKGKRKYLHRPSRTAELK 53
>ZCH10_HUMAN (Q8TBK6) Zinc finger CCHC domain-containing protein 10| Length = 192 Score = 42.0 bits (97), Expect = 0.002 Identities = 16/24 (66%), Positives = 19/24 (79%) Frame = -3 Query: 719 GHWTYECKNERVYISRPSRTDQLK 648 GHWTYEC +R Y+ RPSRT +LK Sbjct: 52 GHWTYECTGKRKYLHRPSRTAELK 75 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 62,390,261 Number of Sequences: 219361 Number of extensions: 942179 Number of successful extensions: 2300 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 2269 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2300 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 7762912789 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)