ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd15p22
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1EMF2_ARATH (Q8L6Y4) Polycomb protein EMBRYONIC FLOWER 2 56 1e-07
2VRN2_ARATH (Q8W5B1) Polycomb group protein VERNALIZATION 2 52 2e-06
3FIS2_ARATH (Q9ZNT9) Polycomb group protein FERTILIZATION-INDEPEN... 35 0.19
4NO75_LUPLU (Q06841) Early nodulin 75 protein (N-75) (NGM-75) (Fr... 35 0.25
5YLU2_PICAN (P34735) Hypothetical protein in LEU2 3'region (Fragm... 29 0.31
6CN155_HUMAN (Q5H9T9) Protein C14orf155 33 0.56
7PHLA1_MOUSE (Q62392) Pleckstrin homology-like domain family A me... 33 0.96
8PHLA1_HUMAN (Q8WV24) Pleckstrin homology-like domain family A me... 32 1.6
9TNC6B_HUMAN (Q9UPQ9) Trinucleotide repeat-containing 6B protein 32 1.6
10NO20_MEDTR (P93329) Early nodulin 20 precursor (N-20) 32 2.1
11KE4_CANFA (Q5TJF6) Zinc transporter SLC39A7 (Solute carrier fami... 32 2.1
12Y4105_ARATH (Q9M158) Putative protein At4g01050 32 2.1
13CHD9_HUMAN (Q3L8U1) Chromodomain-helicase-DNA-binding protein 9 ... 31 3.6
14IF4G1_HUMAN (Q04637) Eukaryotic translation initiation factor 4 ... 31 3.6
15SLOU_DROME (P22807) Homeobox protein slou (S59/2) (Protein slouc... 31 3.6
16MURD_TREPA (O83873) UDP-N-acetylmuramoylalanine--D-glutamate lig... 30 4.8
17ZEP2_MOUSE (Q3UHF7) Human immunodeficiency virus type I enhancer... 30 4.8
18ZC3H5_MOUSE (Q8BL48) Zinc finger CCCH-type domain-containing pro... 30 4.8
19SGS3_DROSI (P13729) Salivary glue protein Sgs-3 precursor 30 4.8
20SRRM1_CHICK (Q5ZMJ9) Serine/arginine repetitive matrix protein 1 30 4.8
21RCOR2_XENLA (Q6NRZ0) REST corepressor 2 30 4.8
22YAS9_SCHPO (Q10145) Hypothetical RNA-binding protein C3H8.09c in... 30 4.8
23CHD9_MOUSE (Q8BYH8) Chromodomain-helicase-DNA-binding protein 9 ... 30 6.2
24APBA1_RAT (O35430) Amyloid beta A4 precursor protein-binding fam... 30 6.2
25SERI1_BOMMO (P07856) Sericin 1 precursor (Silk gum protein) 30 6.2
26Y4EE_RHISN (P55428) Hypothetical lipoprotein y4eE precursor 30 8.1

>EMF2_ARATH (Q8L6Y4) Polycomb protein EMBRYONIC FLOWER 2|
          Length = 631

 Score = 55.8 bits (133), Expect = 1e-07
 Identities = 21/29 (72%), Positives = 22/29 (75%)
 Frame = -3

Query: 650 WCWRFVMIKLWNHNLLDARAMNTCNMILE 564
           WCWR  M+KLWNH LLDAR MN CN  LE
Sbjct: 599 WCWRVFMVKLWNHGLLDARTMNNCNTFLE 627



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>VRN2_ARATH (Q8W5B1) Polycomb group protein VERNALIZATION 2|
          Length = 440

 Score = 52.0 bits (123), Expect = 2e-06
 Identities = 27/71 (38%), Positives = 32/71 (45%), Gaps = 12/71 (16%)
 Frame = -3

Query: 650 WCWRFVMIKLWNHNLLDARAMNTCNMILEGYH------------PHPKKKT*VDRAPVDH 507
           WCWR  +IKLWNH L+D+  +N CN ILE                HP      +   VDH
Sbjct: 361 WCWRLFLIKLWNHGLVDSATINNCNTILENCRNTSVTNNNNNSVDHPSDSNTNNNNIVDH 420

Query: 506 PIPHPKKM*VD 474
           P     K  VD
Sbjct: 421 PNDIKNKNNVD 431



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>FIS2_ARATH (Q9ZNT9) Polycomb group protein FERTILIZATION-INDEPENDENT SEED 2|
          Length = 632

 Score = 35.0 bits (79), Expect = 0.19
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = -3

Query: 650 WCWRFVMIKLWNHNLLDARAMNTCNMIL 567
           W WR   IKLWN+ L+ A+  + C  IL
Sbjct: 577 WWWRMFRIKLWNNGLICAKTFHKCTTIL 604



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>NO75_LUPLU (Q06841) Early nodulin 75 protein (N-75) (NGM-75) (Fragment)|
          Length = 434

 Score = 34.7 bits (78), Expect = 0.25
 Identities = 19/74 (25%), Positives = 35/74 (47%), Gaps = 5/74 (6%)
 Frame = -3

Query: 557 HPHPKKKT*VDRAPVDHPIPHPKKM*VDRAPVDHPIPHPKKM*V-----DRAPVDHPIPR 393
           HP P      ++ P+++P PH K       P+++P PH K         ++ P+++P+P 
Sbjct: 37  HPPPVHPPPHEKPPIEYPPPHTK------PPIEYPPPHVKPPIQYPPPHEKPPIEYPLPH 90

Query: 392 SSTCGSSHSPPQEE 351
                  + PP E+
Sbjct: 91  EKP--PVYEPPYEK 102



 Score = 31.6 bits (70), Expect = 2.1
 Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 4/72 (5%)
 Frame = -3

Query: 554 PHPKKKT*VDRAPVDHPIPHPK----KM*VDRAPVDHPIPHPKKM*VDRAPVDHPIPRSS 387
           P P +    D+ P+++P PH K    +   +R+P  HP  H      ++ P  +P P   
Sbjct: 232 PPPAQPPPHDKPPIEYPPPHEKPPVYEPPYERSPPVHPPSH------EKPPFVYPPPHEK 285

Query: 386 TCGSSHSPPQEE 351
           +    H PP E+
Sbjct: 286 S--PMHEPPYEK 295



 Score = 31.2 bits (69), Expect = 2.8
 Identities = 16/63 (25%), Positives = 31/63 (49%), Gaps = 4/63 (6%)
 Frame = -3

Query: 527 DRAPVDHPIPHPK----KM*VDRAPVDHPIPHPKKM*VDRAPVDHPIPRSSTCGSSHSPP 360
           ++ P+++P+PH K    +   ++ P  HP PH      ++ P+++  P        H PP
Sbjct: 80  EKPPIEYPLPHEKPPVYEPPYEKPPPVHPPPH------EKPPIEYSPPHEKP--PVHEPP 131

Query: 359 QEE 351
            E+
Sbjct: 132 YEK 134



 Score = 29.6 bits (65), Expect = 8.1
 Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 5/61 (8%)
 Frame = -3

Query: 557 HPHPKKKT*VDRAPVDHPIPHPK----KM*VDRAPVDHPIP-HPKKM*VDRAPVDHPIPR 393
           HP P +K      P+ HP PH K    +   ++ P  HP P HP     ++ P+++P P 
Sbjct: 5   HPPPHEKP-----PIVHPPPHEKPPLFEPPFEKPPPAHPPPVHPPPH--EKPPIEYPPPH 57

Query: 392 S 390
           +
Sbjct: 58  T 58



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>YLU2_PICAN (P34735) Hypothetical protein in LEU2 3'region (Fragment)|
          Length = 373

 Score = 28.9 bits (63), Expect(2) = 0.31
 Identities = 20/47 (42%), Positives = 25/47 (53%)
 Frame = -2

Query: 543 EEDVSRSSTCGSSHSPPQEDVSRSSTCGSSHSPPQEDVSRSSTCGSS 403
           EE+   SS+  SSHS   +  S SST  S+ S     +S SST  SS
Sbjct: 103 EENDDDSSSAQSSHSSTDDATSTSST--STTSSSSSSLSSSSTSSSS 147



 Score = 24.3 bits (51), Expect(2) = 0.31
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -3

Query: 398 PRSSTCGSSHSPPQEEDMSRSST 330
           P+SST  S+ S P    +S SST
Sbjct: 153 PQSSTMSSTDSSPTSSSLSASST 175



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>CN155_HUMAN (Q5H9T9) Protein C14orf155|
          Length = 837

 Score = 33.5 bits (75), Expect = 0.56
 Identities = 19/62 (30%), Positives = 25/62 (40%), Gaps = 6/62 (9%)
 Frame = -2

Query: 561 IPPPP*EEDVSRSSTCGSSHSP------PQEDVSRSSTCGSSHSPPQEDVSRSSTCGSSH 400
           + PPP EE  S      +  +P      P E+     T  + HSPP +DV         H
Sbjct: 670 VQPPPAEEAPSEVQPPPAEEAPAEVQSLPAEETPIEETLAAVHSPPADDVPAEEASVDKH 729

Query: 399 SP 394
           SP
Sbjct: 730 SP 731



 Score = 30.0 bits (66), Expect = 6.2
 Identities = 16/53 (30%), Positives = 21/53 (39%), Gaps = 11/53 (20%)
 Frame = -2

Query: 561 IPPPP*EE-----------DVSRSSTCGSSHSPPQEDVSRSSTCGSSHSPPQE 436
           + PPP EE           +     T  + HSPP +DV         HSPP +
Sbjct: 682 VQPPPAEEAPAEVQSLPAEETPIEETLAAVHSPPADDVPAEEASVDKHSPPAD 734



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>PHLA1_MOUSE (Q62392) Pleckstrin homology-like domain family A member 1 (T-cell|
           death-associated gene 51 protein) (Proline- and
           glutamine-rich protein) (PQR protein)
          Length = 261

 Score = 32.7 bits (73), Expect = 0.96
 Identities = 22/76 (28%), Positives = 30/76 (39%)
 Frame = -3

Query: 557 HPHPKKKT*VDRAPVDHPIPHPKKM*VDRAPVDHPIPHPKKM*VDRAPVDHPIPRSSTCG 378
           HPHP   +   + P  HP PHP           HP PHP ++     P+           
Sbjct: 207 HPHPHPYSHPHQHPHPHPHPHP-----------HPHPHPYQLQHAHQPL----------- 244

Query: 377 SSHSPPQEEDMSRSST 330
             HS PQ   + RS++
Sbjct: 245 --HSQPQGHRLLRSTS 258



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>PHLA1_HUMAN (Q8WV24) Pleckstrin homology-like domain family A member 1 (T-cell|
           death-associated gene 51 protein) (Apoptosis-associated
           nuclear protein) (Proline- and histidine-rich protein)
           (Proline- and glutamine-rich protein) (PQ-rich protein)
          Length = 259

 Score = 32.0 bits (71), Expect = 1.6
 Identities = 19/58 (32%), Positives = 26/58 (44%)
 Frame = -3

Query: 557 HPHPKKKT*VDRAPVDHPIPHPKKM*VDRAPVDHPIPHPKKM*VDRAPVDHPIPRSST 384
           HPHP   +     P  HP PHP ++     P  HP PH +       P  H + RS++
Sbjct: 211 HPHPHPHSHPHSHPHPHPHPHPHQI-----PHPHPQPHSQ-------PHGHRLLRSTS 256



 Score = 31.2 bits (69), Expect = 2.8
 Identities = 21/60 (35%), Positives = 21/60 (35%)
 Frame = -3

Query: 557 HPHPKKKT*VDRAPVDHPIPHPKKM*VDRAPVDHPIPHPKKM*VDRAPVDHPIPRSSTCG 378
           HPHP         P  HP PHP        P  H IPHP           HP P S   G
Sbjct: 213 HPHPHSH------PHSHPHPHPH-------PHPHQIPHP-----------HPQPHSQPHG 248



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>TNC6B_HUMAN (Q9UPQ9) Trinucleotide repeat-containing 6B protein|
          Length = 1723

 Score = 32.0 bits (71), Expect = 1.6
 Identities = 18/52 (34%), Positives = 21/52 (40%)
 Frame = +2

Query: 359 GVGNGMIHRCSIGEWDDPQVLDRLTSSWGGEWDDPQVLDRLTSSWGGEWDDP 514
           G GN M    S GEW  P   D L     GEW  P   +  T +W  +   P
Sbjct: 497 GEGNKMTSGVSQGEWKQPTGSDELKI---GEWSGPNQPNSSTGAWDNQKGHP 545



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>NO20_MEDTR (P93329) Early nodulin 20 precursor (N-20)|
          Length = 268

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 22/63 (34%), Positives = 27/63 (42%), Gaps = 5/63 (7%)
 Frame = -1

Query: 499 PTPRRCESIEH-----LWIIPFPTPRRCESIEHLWIIPFPDRAPVDHPIPHPKKKI*VDR 335
           PTPR    I H     L   P P+P    S       P P  +P   PIPHP+K+     
Sbjct: 143 PTPRSSTPIPHPPRRSLPSPPSPSPSPSPS-------PSPSPSPRSTPIPHPRKRSPASP 195

Query: 334 APS 326
           +PS
Sbjct: 196 SPS 198



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>KE4_CANFA (Q5TJF6) Zinc transporter SLC39A7 (Solute carrier family 39 member|
           7) (Histidine-rich membrane protein Ke4)
          Length = 469

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 23/94 (24%), Positives = 30/94 (31%)
 Frame = -2

Query: 591 HEHLQHDS*GIPPPP*EEDVSRSSTCGSSHSPPQEDVSRSSTCGSSHSPPQEDVSRSSTC 412
           HE L  D  G       ED     +    H    E +    T G  H    ED+    + 
Sbjct: 35  HEDLHEDFHGHSHRRSHEDFHHGHSYAHGHGHTHESIWHGHTHGHEHGHAHEDLHHGHSH 94

Query: 411 GSSHSPIEHLWIIPFPTPRRRYESIEHLPFHGGW 310
           G SH  + H           R    +H   HGG+
Sbjct: 95  GQSHESLYH-----------RGHGHDHEHSHGGY 117



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>Y4105_ARATH (Q9M158) Putative protein At4g01050|
          Length = 466

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = -3

Query: 515 VDHPIPHPKKM*VDRAPVDHPIPHPKKM*VDRAPVDHPIP 396
           VD P+P P+ +      VD P+P P+       PV  P+P
Sbjct: 384 VDKPVPEPETVAATTTTVDKPVPEPE-------PVPEPVP 416



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>CHD9_HUMAN (Q3L8U1) Chromodomain-helicase-DNA-binding protein 9 (EC 3.6.1.-)|
            (ATP-dependent helicase CHD9) (CHD-9) (Chromatin-related
            mesenchymal modulator) (CReMM) (Chromatin remodeling
            factor CHROM1) (Peroxisomal proliferator-activated
            receptor A-inter
          Length = 2897

 Score = 30.8 bits (68), Expect = 3.6
 Identities = 18/45 (40%), Positives = 22/45 (48%)
 Frame = -2

Query: 531  SRSSTCGSSHSPPQEDVSRSSTCGSSHSPPQEDVSRSSTCGSSHS 397
            S SS+   SHS      S SS+C S+ S      S SS+  SS S
Sbjct: 2149 SSSSSSSCSHSRSGSSSSSSSSCSSASSSSSSSTSSSSSSSSSSS 2193



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>IF4G1_HUMAN (Q04637) Eukaryotic translation initiation factor 4 gamma 1|
           (eIF-4-gamma 1) (eIF-4G1) (eIF-4G 1) (p220)
          Length = 1600

 Score = 30.8 bits (68), Expect = 3.6
 Identities = 17/45 (37%), Positives = 23/45 (51%)
 Frame = -3

Query: 479 VDRAPVDHPIPHPKKM*VDRAPVDHPIPRSSTCGSSHSPPQEEDM 345
           VD +PV  P    K++    AP   P    +T  S+ SP QEE+M
Sbjct: 413 VDLSPVSEPEEQAKEVTASVAPPTIPSATPATAPSATSPAQEEEM 457



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>SLOU_DROME (P22807) Homeobox protein slou (S59/2) (Protein slouch) (Homeobox|
           protein NK-1)
          Length = 659

 Score = 30.8 bits (68), Expect = 3.6
 Identities = 23/72 (31%), Positives = 25/72 (34%)
 Frame = -3

Query: 560 YHPHPKKKT*VDRAPVDHPIPHPKKM*VDRAPVDHPIPHPKKM*VDRAPVDHPIPRSSTC 381
           +H HP         P  H  PHP        P  HP PHP  +   RAP        S  
Sbjct: 209 HHQHPAH-------PHSHQHPHPH-------PHPHPHPHPSAVFHLRAPSSSSTAPPSPA 254

Query: 380 GSSHSPPQEEDM 345
            S  SPP    M
Sbjct: 255 TSPLSPPTSPAM 266



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>MURD_TREPA (O83873) UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC|
           6.3.2.9) (UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
           synthetase) (D-glutamic acid-adding enzyme)
          Length = 532

 Score = 30.4 bits (67), Expect = 4.8
 Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
 Frame = -2

Query: 516 CGSSHSPPQEDVSRSS--TCGSSHSPPQEDVSRSSTCGSSHSPIEH 385
           C  SHSP   + +      C S+HSP QE   R +    S++ IEH
Sbjct: 348 CAHSHSPAYANHASPPDYACPSAHSPFQEHTRRLAQALESYTGIEH 393



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>ZEP2_MOUSE (Q3UHF7) Human immunodeficiency virus type I enhancer-binding|
           protein 2 homolog (Myc intron-binding protein 1)
           (MIBP-1)
          Length = 2430

 Score = 30.4 bits (67), Expect = 4.8
 Identities = 19/54 (35%), Positives = 24/54 (44%), Gaps = 4/54 (7%)
 Frame = -2

Query: 465 CGSSHSPPQEDVSRSSTCGSSHSPIEHL----WIIPFPTPRRRYESIEHLPFHG 316
           C  S S PQ  +S+  T   SH P + L    W+ P P P    E +   P HG
Sbjct: 94  CQHSLSFPQHSLSQGMT--HSHKPHQSLEGPPWLFPGPLPSVASEDLFPFPMHG 145



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>ZC3H5_MOUSE (Q8BL48) Zinc finger CCCH-type domain-containing protein 5|
          Length = 810

 Score = 30.4 bits (67), Expect = 4.8
 Identities = 27/86 (31%), Positives = 33/86 (38%), Gaps = 4/86 (4%)
 Frame = -2

Query: 561 IPPPP*EEDVSRSSTCGSSHSPP----QEDVSRSSTCGSSHSPPQEDVSRSSTCGSSHSP 394
           I PPP  +DV  SS   S   P         +  S   S  SP   D+S      S    
Sbjct: 319 IEPPPLSDDVQPSSAVSSPTQPGPVLYMPSAAGDSVPVSPSSPHAPDLSALLCRNSGLGS 378

Query: 393 IEHLWIIPFPTPRRRYESIEHLPFHG 316
             HL   P P P R+  ++E L F G
Sbjct: 379 PSHLCSSP-PGPSRKASNLEGLVFPG 403



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>SGS3_DROSI (P13729) Salivary glue protein Sgs-3 precursor|
          Length = 217

 Score = 30.4 bits (67), Expect = 4.8
 Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
 Frame = -2

Query: 555 PPP*EEDVSRSSTCGSSHSPPQEDV--SRSSTCGSSHSPPQEDVSRSSTCGSSHSPIEH 385
           PP      S S+T  ++ +PP +    S S+T  ++ +PP      S+T  ++H P  H
Sbjct: 67  PPTKPTCKSTSTTTTTTRAPPTKPTCKSTSTTTTTTRAPPTTTCKTSTTTTTTHKPTTH 125



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>SRRM1_CHICK (Q5ZMJ9) Serine/arginine repetitive matrix protein 1|
          Length = 888

 Score = 30.4 bits (67), Expect = 4.8
 Identities = 32/93 (34%), Positives = 40/93 (43%), Gaps = 11/93 (11%)
 Frame = -2

Query: 558 PPPP*EEDVSRS--STCGSSHSPPQEDVS------RSSTCGSSH---SPPQEDVSRSSTC 412
           PPPP +   S S  S    SHSPP +  S      RS +  S H   SPP    SRS+  
Sbjct: 610 PPPPPKRRASPSPQSKRRVSHSPPPKQRSSPAAKRRSPSISSKHRKGSPP----SRSNR- 664

Query: 411 GSSHSPIEHLWIIPFPTPRRRYESIEHLPFHGG 313
             + SP ++    P P PR  + S    P   G
Sbjct: 665 -ETRSPPQNKRDSPSPRPRASHTSSSPPPLRRG 696



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>RCOR2_XENLA (Q6NRZ0) REST corepressor 2|
          Length = 503

 Score = 30.4 bits (67), Expect = 4.8
 Identities = 23/69 (33%), Positives = 32/69 (46%)
 Frame = -2

Query: 555 PPP*EEDVSRSSTCGSSHSPPQEDVSRSSTCGSSHSPPQEDVSRSSTCGSSHSPIEHLWI 376
           PPP   D+S + T GSS +P +ED     T  SS S P    + ++   S   P+    I
Sbjct: 394 PPPASTDMS-NKTSGSSQTPNEEDDEVQITSVSSSSQPAPPAAAAAASLSLPPPLLRPAI 452

Query: 375 IPFPTPRRR 349
              PT  R+
Sbjct: 453 PCAPTLHRQ 461



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>YAS9_SCHPO (Q10145) Hypothetical RNA-binding protein C3H8.09c in chromosome I|
          Length = 738

 Score = 30.4 bits (67), Expect = 4.8
 Identities = 18/67 (26%), Positives = 29/67 (43%), Gaps = 9/67 (13%)
 Frame = -2

Query: 510 SSHSPPQEDVSRSSTCGSSHSPPQEDVSRSST---------CGSSHSPIEHLWIIPFPTP 358
           +S SPP  DV ++     S+ P +++   SST           S H P + L    +  P
Sbjct: 164 TSQSPPSLDVEQNKPFSISNEPVEQETENSSTKDLQVYDFQTASEHLPEQSLQNTTYYDP 223

Query: 357 RRRYESI 337
            + Y S+
Sbjct: 224 SKTYSSV 230



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>CHD9_MOUSE (Q8BYH8) Chromodomain-helicase-DNA-binding protein 9 (EC 3.6.1.-)|
            (ATP-dependent helicase CHD9) (CHD-9) (Peroxisomal
            proliferator-activated receptor A-interacting complex 320
            kDa protein) (PPAR-alpha-interacting complex protein 320
            kDa)
          Length = 2885

 Score = 30.0 bits (66), Expect = 6.2
 Identities = 18/45 (40%), Positives = 22/45 (48%)
 Frame = -2

Query: 531  SRSSTCGSSHSPPQEDVSRSSTCGSSHSPPQEDVSRSSTCGSSHS 397
            S SS+   SHS      S SS+C S+ S      S SS+  SS S
Sbjct: 2149 SSSSSSSCSHSRSGSSSSSSSSCSSASSSSSSSSSSSSSSSSSSS 2193



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>APBA1_RAT (O35430) Amyloid beta A4 precursor protein-binding family A member|
           1 (Neuron-specific X11 protein) (Neuronal
           Munc18-1-interacting protein 1) (Mint-1) (Adapter
           protein X11alpha)
          Length = 839

 Score = 30.0 bits (66), Expect = 6.2
 Identities = 15/39 (38%), Positives = 18/39 (46%)
 Frame = -2

Query: 615 PQPTGCARHEHLQHDS*GIPPPP*EEDVSRSSTCGSSHS 499
           P P G A  +H  H +   PPPP EE+  R      S S
Sbjct: 43  PPPAGHAPEDHRAHPAPPPPPPPQEEEEERGECLARSAS 81



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>SERI1_BOMMO (P07856) Sericin 1 precursor (Silk gum protein)|
          Length = 1186

 Score = 30.0 bits (66), Expect = 6.2
 Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
 Frame = -2

Query: 537  DVSRSSTCGSS----HSPPQEDVSRSSTCGSSHSPPQEDVSRSSTCGSS 403
            D++ SST G S    +S    D S SST  SS++    D++ SST G S
Sbjct: 910  DLAGSSTSGGSSTYGYSSDSRDGSVSSTGSSSNTDASTDLAGSSTSGGS 958



 Score = 30.0 bits (66), Expect = 6.2
 Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
 Frame = -2

Query: 537 DVSRSSTCGSS----HSPPQEDVSRSSTCGSSHSPPQEDVSRSSTCGSS 403
           D++ SST G S    +S    D S SST  SS++    D++ SST G S
Sbjct: 834 DLTGSSTSGGSSTYGYSSDSRDGSVSSTGSSSNTDASTDLAGSSTSGGS 882



 Score = 29.6 bits (65), Expect = 8.1
 Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
 Frame = -2

Query: 537  DVSRSSTCGSS----HSPPQEDVSRSSTCGSSHSPPQEDVSRSSTCGSS 403
            D++ SST G S    +S    D S SST  SS++    D++ SST G S
Sbjct: 948  DLAGSSTSGGSSTYGYSSNSRDGSVSSTGSSSNTDASTDLTGSSTSGGS 996



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>Y4EE_RHISN (P55428) Hypothetical lipoprotein y4eE precursor|
          Length = 358

 Score = 29.6 bits (65), Expect = 8.1
 Identities = 30/103 (29%), Positives = 43/103 (41%), Gaps = 12/103 (11%)
 Frame = -3

Query: 377 SSHSPPQEEDMSRSSTFHSMGVGFGWLLLNRIR-------GSMFVALK----EAFSFFLL 231
           S + P +    +R     S  +GF  LL+ + R       GS    L     +A+  F L
Sbjct: 88  SFNLPRRSSIETREIASISPAMGFTVLLVEKTRDNTVSNGGSTLSLLSSNSNDAYLSFAL 147

Query: 230 TVKNSRRGSYWCFISKSMLQGNYKAMA-WQDVGRFEMIPSTNE 105
             K S  G  W F +KS+LQGN    A WQ      ++  T +
Sbjct: 148 GAKPSSSGQKWSF-AKSLLQGNKAQTAYWQKPWDMNLLGPTGD 189


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 110,418,472
Number of Sequences: 219361
Number of extensions: 2755695
Number of successful extensions: 7675
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 6244
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7517
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6143359464
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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