ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd15p18
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_190836.1| Oryza sativa (japonica cultivar-group), predic... 190 4e-45
2dbj|AK101857.1| Oryza sativa (japonica cultivar-group) cDNA clon... 190 4e-45
3dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 159 2e-35
4dbj|AP003345.3| Oryza sativa (japonica cultivar-group) genomic D... 159 2e-35
5gb|AY110805.1| Zea mays CL31502_1 mRNA sequence 68 4e-08
6gb|AE017261.1| Picrophilus torridus DSM 9790, complete genome 42 2.5
7gb|AC145959.3| Gallus gallus chromosome UNK clone CH261-17M10, c... 42 2.5
8emb|AL731735.14| Mouse DNA sequence from clone RP23-139P21 on ch... 42 2.5
9ref|XM_476313.1| Oryza sativa (japonica cultivar-group), predic... 40 9.9
10ref|XM_628961.1| Dictyostelium discoideum putative protein kinas... 40 9.9
11gb|AC016792.5| Drosophila melanogaster clone BACR26A02, complete... 40 9.9
12gb|AC114409.17| Mus musculus chromosome 5, clone RP23-148F6, com... 40 9.9
13ref|XM_648525.1| Entamoeba histolytica HM-1:IMSS zinc finger pro... 40 9.9
14gb|AC147365.4| Medicago truncatula clone mth2-10f9, complete seq... 40 9.9
15emb|AL831732.18| Human DNA sequence from clone RP11-396L10 on ch... 40 9.9
16emb|AL357078.35| Human DNA sequence from clone RP4-535B20 on chr... 40 9.9
17emb|Z50152.1|DMTRXIII D.melanogaster DNA for trxI and trxII genes 40 9.9
18gb|AC109133.2| Homo sapiens chromosome 5 clone RP11-109B6, compl... 40 9.9
19dbj|AP008230.1| Desulfitobacterium hafniense Y51 genomic DNA, co... 40 9.9
20gb|AC092709.2| Homo sapiens chromosome 8, clone RP11-509P12, com... 40 9.9
21ref|NM_142095.2| Drosophila melanogaster CG12207-RB, transcript ... 40 9.9
22gb|AC090569.4| Homo sapiens chromosome 17, clone RP11-269M11, co... 40 9.9
23gb|AC027043.7| Homo sapiens chromosome 8, clone RP11-769H18, com... 40 9.9
24gb|AC084257.2| Homo sapiens chromosome 8, clone RP1-164F9, compl... 40 9.9
25dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.9
26gb|AC087433.4|AC087433 Homo sapiens chromosome 15 clone RP11-101... 40 9.9
27gb|AC007904.6|AC007904 Drosophila melanogaster, chromosome 3R, r... 40 9.9
28gb|AC154592.2| Mus musculus BAC clone RP23-249J17 from chromosom... 40 9.9
29gb|AC079154.5| Homo sapiens BAC clone RP11-314E14 from 2, comple... 40 9.9
30gb|AC018880.6| Homo sapiens BAC clone RP11-336P15 from 2, comple... 40 9.9
31dbj|AP003019.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.9
32dbj|AB046473.2| Eurypharynx pelecanoides mitochondrial DNA, comp... 40 9.9
33dbj|AK066933.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 9.9
34gb|AE003704.3| Drosophila melanogaster chromosome 3R, section 42... 40 9.9
35gb|U23446.1|DMU23446 Drosophila melanogaster trithorax gene, reg... 40 9.9
36dbj|AB012766.1| Oryza sativa gene for ovp2, complete cds 40 9.9
37dbj|D16387.1| Asterina pectinifera mitochondrial DNA, complete g... 40 9.9
38dbj|D45384.1| Oryza sativa mRNA for vacuolar H+-pyrophosphatase,... 40 9.9 
>ref|NM_190836.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2862

 Score =  190 bits (96), Expect = 4e-45
 Identities = 216/256 (84%)
 Strand = Plus / Minus

                                                                        
Query: 465  ctatcttctactaaatattgaccgacactgttatcatcggaactatttgggacttcagac 524
            ||||||||||||||| ||||||| | ||  |||||||| |  ||| ||||| ||||||||
Sbjct: 2717 ctatcttctactaaacattgaccaaaaccattatcatcagtgctaattgggccttcagac 2658

                                                                        
Query: 525  atgcaatccaaagaactacaactgcttctggaagagagtctaccatctgctgaaaatcca 584
            ||||| |||||||| ||| ||||||||||| | ||||||||||| ||  |||||||||| 
Sbjct: 2657 atgcagtccaaagagctagaactgcttctgcaggagagtctaccgtcctctgaaaatccg 2598

                                                                        
Query: 585  gacttatgtcgctgcagaaacccacttctgttactatcaggtgtgttcacccttgtctgt 644
            ||||| || ||||| || || |||  | ||||||||||||||||| ||||||||| ||||
Sbjct: 2597 gacttttgacgctgaagcaatccatatttgttactatcaggtgtgctcacccttgactgt 2538

                                                                        
Query: 645  tgaaacctagatgtgtgaagagactcaaagaccggtatgagattctttgaccttgattcc 704
            |||||||| ||||| |||||||| ||||| || ||||| |||||||||||||| ||||| 
Sbjct: 2537 tgaaacctggatgtatgaagagattcaaatactggtataagattctttgacctagattca 2478

                            
Query: 705  acattatgagtctgga 720
            | |||  |||||||||
Sbjct: 2477 atattgcgagtctgga 2462



 Score =  107 bits (54), Expect = 5e-20
 Identities = 84/94 (89%)
 Strand = Plus / Minus

                                                                        
Query: 324  gggagtagctcactatcttcacaatcgtctttgctatttacaactccgagctgggcctcc 383
            |||||| |||| || ||||||||||| |||||| ||||||||| ||||||||||||||| 
Sbjct: 2852 gggagttgctctctgtcttcacaatcctctttgttatttacaaatccgagctgggcctct 2793

                                              
Query: 384  gtgttcaggctctcagtgttatttacaagctcgg 417
            ||||| ||||||| ||| ||||||||||||||||
Sbjct: 2792 gtgttaaggctctgagtattatttacaagctcgg 2759
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>dbj|AK101857.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033069O17, full
            insert sequence
          Length = 3412

 Score =  190 bits (96), Expect = 4e-45
 Identities = 216/256 (84%)
 Strand = Plus / Minus

                                                                        
Query: 465  ctatcttctactaaatattgaccgacactgttatcatcggaactatttgggacttcagac 524
            ||||||||||||||| ||||||| | ||  |||||||| |  ||| ||||| ||||||||
Sbjct: 2966 ctatcttctactaaacattgaccaaaaccattatcatcagtgctaattgggccttcagac 2907

                                                                        
Query: 525  atgcaatccaaagaactacaactgcttctggaagagagtctaccatctgctgaaaatcca 584
            ||||| |||||||| ||| ||||||||||| | ||||||||||| ||  |||||||||| 
Sbjct: 2906 atgcagtccaaagagctagaactgcttctgcaggagagtctaccgtcctctgaaaatccg 2847

                                                                        
Query: 585  gacttatgtcgctgcagaaacccacttctgttactatcaggtgtgttcacccttgtctgt 644
            ||||| || ||||| || || |||  | ||||||||||||||||| ||||||||| ||||
Sbjct: 2846 gacttttgacgctgaagcaatccatatttgttactatcaggtgtgctcacccttgactgt 2787

                                                                        
Query: 645  tgaaacctagatgtgtgaagagactcaaagaccggtatgagattctttgaccttgattcc 704
            |||||||| ||||| |||||||| ||||| || ||||| |||||||||||||| ||||| 
Sbjct: 2786 tgaaacctggatgtatgaagagattcaaatactggtataagattctttgacctagattca 2727

                            
Query: 705  acattatgagtctgga 720
            | |||  |||||||||
Sbjct: 2726 atattgcgagtctgga 2711



 Score =  159 bits (80), Expect = 2e-35
 Identities = 230/275 (83%), Gaps = 10/275 (3%)
 Strand = Plus / Minus

                                                                        
Query: 1    caaattaagagctattattgaaaatggaattaacaatctcgttatgtacaagttc--ttg 58
            |||||||||||||||||||||||||| ||| |||||||| ||||||| || ||||  |||
Sbjct: 3410 caaattaagagctattattgaaaatgcaatgaacaatcttgttatgtgcacgttcttttg 3351

                                                                        
Query: 59   taagattgaaaccccaacttcacatcactagggcttccatacacgcagggccataattcg 118
            |||||| |||| |||||||||||| ||| |  ||| |||||| |   ||||| |||||||
Sbjct: 3350 taagatggaaa-cccaacttcacagcaccaccgctcccatacccattgggccttaattcg 3292

                                                                        
Query: 119  acctccctttcatcctttcctcagtaaacttatcatgaatgcttataaatagtggagtac 178
            ||||||| |||||  |||  |||||||| ||||||||||||||||||||||| |     |
Sbjct: 3291 acctccccttcatttttttatcagtaaatttatcatgaatgcttataaatagag-----c 3237

                                                                        
Query: 179  tagagaagagaggccaagaactccggatggagaaatgaaagaattaacagttacacacgc 238
            || |||||||||| |||||||||| |  ||||||||||||||| || ||| |||||||||
Sbjct: 3236 tatagaagagaggtcaagaactccaggaggagaaatgaaagaa-tagcagctacacacgc 3178

                                               
Query: 239  acgggaaagacttggcgattcaaggagctcctcca 273
            ||    ||||||| |||||||||| ||||||||||
Sbjct: 3177 acaatgaagactt-gcgattcaagaagctcctcca 3144



 Score =  107 bits (54), Expect = 5e-20
 Identities = 84/94 (89%)
 Strand = Plus / Minus

                                                                        
Query: 324  gggagtagctcactatcttcacaatcgtctttgctatttacaactccgagctgggcctcc 383
            |||||| |||| || ||||||||||| |||||| ||||||||| ||||||||||||||| 
Sbjct: 3101 gggagttgctctctgtcttcacaatcctctttgttatttacaaatccgagctgggcctct 3042

                                              
Query: 384  gtgttcaggctctcagtgttatttacaagctcgg 417
            ||||| ||||||| ||| ||||||||||||||||
Sbjct: 3041 gtgttaaggctctgagtattatttacaagctcgg 3008
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  159 bits (80), Expect = 2e-35
 Identities = 230/275 (83%), Gaps = 10/275 (3%)
 Strand = Plus / Plus

                                                                            
Query: 1        caaattaagagctattattgaaaatggaattaacaatctcgttatgtacaagttctt--g 58
                |||||||||||||||||||||||||| ||| |||||||| ||||||| || ||||||  |
Sbjct: 33362245 caaattaagagctattattgaaaatgcaatgaacaatcttgttatgtgcacgttcttttg 33362304

                                                                            
Query: 59       taagattgaaaccccaacttcacatcactagggcttccatacacgcagggccataattcg 118
                |||||| ||||||| ||||||||| ||| |  ||| |||||| |   ||||| |||||||
Sbjct: 33362305 taagatggaaaccc-aacttcacagcaccaccgctcccatacccattgggccttaattcg 33362363

                                                                            
Query: 119      acctccctttcatcctttcctcagtaaacttatcatgaatgcttataaatagtggagtac 178
                ||||||| |||||  |||  |||||||| ||||||||||||||||||||||| |     |
Sbjct: 33362364 acctccccttcatttttttatcagtaaatttatcatgaatgcttataaatagag-----c 33362418

                                                                            
Query: 179      tagagaagagaggccaagaactccggatggagaaatgaaagaattaacagttacacacgc 238
                || |||||||||| |||||||||| |  ||||||||||||||| || ||| |||||||||
Sbjct: 33362419 tatagaagagaggtcaagaactccaggaggagaaatgaaagaa-tagcagctacacacgc 33362477

                                                   
Query: 239      acgggaaagacttggcgattcaaggagctcctcca 273
                ||    ||||||| |||||||||| ||||||||||
Sbjct: 33362478 acaatgaagactt-gcgattcaagaagctcctcca 33362511



 Score =  121 bits (61), Expect = 3e-24
 Identities = 145/173 (83%)
 Strand = Plus / Plus

                                                                            
Query: 465      ctatcttctactaaatattgaccgacactgttatcatcggaactatttgggacttcagac 524
                ||||||||||||||| ||||||| | ||  |||||||| |  ||| ||||| ||||||||
Sbjct: 33362955 ctatcttctactaaacattgaccaaaaccattatcatcagtgctaattgggccttcagac 33363014

                                                                            
Query: 525      atgcaatccaaagaactacaactgcttctggaagagagtctaccatctgctgaaaatcca 584
                ||||| |||||||| ||| ||||||||||| | ||||||||||| ||  |||||||||| 
Sbjct: 33363015 atgcagtccaaagagctagaactgcttctgcaggagagtctaccgtcctctgaaaatccg 33363074

                                                                     
Query: 585      gacttatgtcgctgcagaaacccacttctgttactatcaggtgtgttcaccct 637
                ||||| || ||||| || || |||  | ||||||||||||||||| |||||||
Sbjct: 33363075 gacttttgacgctgaagcaatccatatttgttactatcaggtgtgctcaccct 33363127



 Score =  107 bits (54), Expect = 5e-20
 Identities = 84/94 (89%)
 Strand = Plus / Plus

                                                                            
Query: 324      gggagtagctcactatcttcacaatcgtctttgctatttacaactccgagctgggcctcc 383
                |||||| |||| || ||||||||||| |||||| ||||||||| ||||||||||||||| 
Sbjct: 33362820 gggagttgctctctgtcttcacaatcctctttgttatttacaaatccgagctgggcctct 33362879

                                                  
Query: 384      gtgttcaggctctcagtgttatttacaagctcgg 417
                ||||| ||||||| ||| ||||||||||||||||
Sbjct: 33362880 gtgttaaggctctgagtattatttacaagctcgg 33362913



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 74/86 (86%)
 Strand = Plus / Plus

                                                                            
Query: 635      ccttgtctgttgaaacctagatgtgtgaagagactcaaagaccggtatgagattctttga 694
                ||||| |||||||||||| ||||| |||||||| ||||| || ||||| |||||||||||
Sbjct: 33363308 ccttgactgttgaaacctggatgtatgaagagattcaaatactggtataagattctttga 33363367

                                          
Query: 695      ccttgattccacattatgagtctgga 720
                ||| ||||| | |||  |||||||||
Sbjct: 33363368 cctagattcaatattgcgagtctgga 33363393
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>dbj|AP003345.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0415A04
          Length = 160669

 Score =  159 bits (80), Expect = 2e-35
 Identities = 230/275 (83%), Gaps = 10/275 (3%)
 Strand = Plus / Plus

                                                                         
Query: 1     caaattaagagctattattgaaaatggaattaacaatctcgttatgtacaagttctt--g 58
             |||||||||||||||||||||||||| ||| |||||||| ||||||| || ||||||  |
Sbjct: 38411 caaattaagagctattattgaaaatgcaatgaacaatcttgttatgtgcacgttcttttg 38470

                                                                         
Query: 59    taagattgaaaccccaacttcacatcactagggcttccatacacgcagggccataattcg 118
             |||||| ||||||| ||||||||| ||| |  ||| |||||| |   ||||| |||||||
Sbjct: 38471 taagatggaaaccc-aacttcacagcaccaccgctcccatacccattgggccttaattcg 38529

                                                                         
Query: 119   acctccctttcatcctttcctcagtaaacttatcatgaatgcttataaatagtggagtac 178
             ||||||| |||||  |||  |||||||| ||||||||||||||||||||||| |     |
Sbjct: 38530 acctccccttcatttttttatcagtaaatttatcatgaatgcttataaatagag-----c 38584

                                                                         
Query: 179   tagagaagagaggccaagaactccggatggagaaatgaaagaattaacagttacacacgc 238
             || |||||||||| |||||||||| |  ||||||||||||||| || ||| |||||||||
Sbjct: 38585 tatagaagagaggtcaagaactccaggaggagaaatgaaagaa-tagcagctacacacgc 38643

                                                
Query: 239   acgggaaagacttggcgattcaaggagctcctcca 273
             ||    ||||||| |||||||||| ||||||||||
Sbjct: 38644 acaatgaagactt-gcgattcaagaagctcctcca 38677



 Score =  121 bits (61), Expect = 3e-24
 Identities = 145/173 (83%)
 Strand = Plus / Plus

                                                                         
Query: 465   ctatcttctactaaatattgaccgacactgttatcatcggaactatttgggacttcagac 524
             ||||||||||||||| ||||||| | ||  |||||||| |  ||| ||||| ||||||||
Sbjct: 39121 ctatcttctactaaacattgaccaaaaccattatcatcagtgctaattgggccttcagac 39180

                                                                         
Query: 525   atgcaatccaaagaactacaactgcttctggaagagagtctaccatctgctgaaaatcca 584
             ||||| |||||||| ||| ||||||||||| | ||||||||||| ||  |||||||||| 
Sbjct: 39181 atgcagtccaaagagctagaactgcttctgcaggagagtctaccgtcctctgaaaatccg 39240

                                                                  
Query: 585   gacttatgtcgctgcagaaacccacttctgttactatcaggtgtgttcaccct 637
             ||||| || ||||| || || |||  | ||||||||||||||||| |||||||
Sbjct: 39241 gacttttgacgctgaagcaatccatatttgttactatcaggtgtgctcaccct 39293



 Score =  107 bits (54), Expect = 5e-20
 Identities = 84/94 (89%)
 Strand = Plus / Plus

                                                                         
Query: 324   gggagtagctcactatcttcacaatcgtctttgctatttacaactccgagctgggcctcc 383
             |||||| |||| || ||||||||||| |||||| ||||||||| ||||||||||||||| 
Sbjct: 38986 gggagttgctctctgtcttcacaatcctctttgttatttacaaatccgagctgggcctct 39045

                                               
Query: 384   gtgttcaggctctcagtgttatttacaagctcgg 417
             ||||| ||||||| ||| ||||||||||||||||
Sbjct: 39046 gtgttaaggctctgagtattatttacaagctcgg 39079



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 74/86 (86%)
 Strand = Plus / Plus

                                                                         
Query: 635   ccttgtctgttgaaacctagatgtgtgaagagactcaaagaccggtatgagattctttga 694
             ||||| |||||||||||| ||||| |||||||| ||||| || ||||| |||||||||||
Sbjct: 39474 ccttgactgttgaaacctggatgtatgaagagattcaaatactggtataagattctttga 39533

                                       
Query: 695   ccttgattccacattatgagtctgga 720
             ||| ||||| | |||  |||||||||
Sbjct: 39534 cctagattcaatattgcgagtctgga 39559
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>gb|AY110805.1| Zea mays CL31502_1 mRNA sequence
          Length = 923

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 55/62 (88%)
 Strand = Plus / Plus

                                                                       
Query: 357 ctatttacaactccgagctgggcctccgtgttcaggctctcagtgttatttacaagctcg 416
           |||||||||| ||||||||||||||| |  || |||||| |||| |||||||||||||||
Sbjct: 290 ctatttacaaatccgagctgggcctctgacttgaggctcccagtattatttacaagctcg 349

             
Query: 417 gc 418
           ||
Sbjct: 350 gc 351



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 35/38 (92%), Gaps = 2/38 (5%)
 Strand = Plus / Plus

                                                 
Query: 203 ggatggagaaatgaaagaattaacagttacacacgcac 240
           |||||||||||||||||||||  ||| |||||||||||
Sbjct: 147 ggatggagaaatgaaagaatt--cagctacacacgcac 182



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                   
Query: 562 gtctaccatctgctgaaaatccagacttatgtcgctgcag 601
           ||||||||||| ||||||  ||||| || |||||||||||
Sbjct: 489 gtctaccatcttctgaaatcccagatttctgtcgctgcag 528
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>gb|AE017261.1| Picrophilus torridus DSM 9790, complete genome
          Length = 1545895

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 119    acctccctttcatcctttcct 139
              |||||||||||||||||||||
Sbjct: 913306 acctccctttcatcctttcct 913286
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>gb|AC145959.3| Gallus gallus chromosome UNK clone CH261-17M10, complete sequence
          Length = 183075

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 126    tttcatcctttcctcagtaaa 146
              |||||||||||||||||||||
Sbjct: 110594 tttcatcctttcctcagtaaa 110574
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>emb|AL731735.14| Mouse DNA sequence from clone RP23-139P21 on chromosome X, complete
              sequence
          Length = 201223

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 211    aaatgaaagaattaacagtta 231
              |||||||||||||||||||||
Sbjct: 185539 aaatgaaagaattaacagtta 185559
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>ref|XM_476313.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2304

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 270 tccaccaggaccataaccagtgat 293
           ||||||| ||||||||||||||||
Sbjct: 705 tccaccaagaccataaccagtgat 682
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>ref|XM_628961.1| Dictyostelium discoideum putative protein kinase (DDB0229346),
           partial mRNA
          Length = 1188

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 212 aatgaaagaattaacagtta 231
           ||||||||||||||||||||
Sbjct: 240 aatgaaagaattaacagtta 259
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>gb|AC016792.5| Drosophila melanogaster clone BACR26A02, complete sequence
          Length = 164971

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 549    cttctggaagagagtctacc 568
              ||||||||||||||||||||
Sbjct: 150015 cttctggaagagagtctacc 149996
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>gb|AC114409.17| Mus musculus chromosome 5, clone RP23-148F6, complete sequence
          Length = 222692

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 422   gtggttaacgttcaagttcttatt 445
             ||||||| ||||||||||||||||
Sbjct: 84288 gtggttagcgttcaagttcttatt 84311
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>ref|XM_648525.1| Entamoeba histolytica HM-1:IMSS zinc finger protein (77.t00018)
           partial mRNA
          Length = 1221

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 13  tattattgaaaatggaatta 32
           ||||||||||||||||||||
Sbjct: 429 tattattgaaaatggaatta 448
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>gb|AC147365.4| Medicago truncatula clone mth2-10f9, complete sequence
          Length = 89850

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 145   aacttatcatgaatgcttat 164
             ||||||||||||||||||||
Sbjct: 88973 aacttatcatgaatgcttat 88954
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>emb|AL831732.18| Human DNA sequence from clone RP11-396L10 on chromosome 1, complete
            sequence
          Length = 38529

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 186  gagaggccaagaactccgga 205
            ||||||||||||||||||||
Sbjct: 2829 gagaggccaagaactccgga 2810
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>emb|AL357078.35| Human DNA sequence from clone RP4-535B20 on chromosome 1 Contains part
             of a novel gene, a novel gene, a ribosomal protein S24
             (RPS24) pseudogene, a mitochondrial ribosomal protein S21
             (MRPS21) pseudogene and a CpG island, complete sequence
          Length = 147603

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 15    ttattgaaaatggaattaac 34
             ||||||||||||||||||||
Sbjct: 22070 ttattgaaaatggaattaac 22051
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>emb|Z50152.1|DMTRXIII D.melanogaster DNA for trxI and trxII genes
          Length = 26618

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 549 cttctggaagagagtctacc 568
           ||||||||||||||||||||
Sbjct: 640 cttctggaagagagtctacc 621
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>gb|AC109133.2| Homo sapiens chromosome 5 clone RP11-109B6, complete sequence
          Length = 168606

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 14     attattgaaaatggaattaa 33
              ||||||||||||||||||||
Sbjct: 112946 attattgaaaatggaattaa 112927
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>dbj|AP008230.1| Desulfitobacterium hafniense Y51 genomic DNA, complete genome
          Length = 5727534

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 2       aaattaagagctattattga 21
               ||||||||||||||||||||
Sbjct: 2783534 aaattaagagctattattga 2783515
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>gb|AC092709.2| Homo sapiens chromosome 8, clone RP11-509P12, complete sequence
          Length = 178904

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 120  cctccctttcatcctttcct 139
            ||||||||||||||||||||
Sbjct: 4116 cctccctttcatcctttcct 4135
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>ref|NM_142095.2| Drosophila melanogaster CG12207-RB, transcript variant B (CG12207),
           mRNA
          Length = 2312

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 549 cttctggaagagagtctacc 568
           ||||||||||||||||||||
Sbjct: 127 cttctggaagagagtctacc 146
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>gb|AC090569.4| Homo sapiens chromosome 17, clone RP11-269M11, complete sequence
          Length = 169262

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 120   cctccctttcatcctttcct 139
             ||||||||||||||||||||
Sbjct: 86664 cctccctttcatcctttcct 86645
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>gb|AC027043.7| Homo sapiens chromosome 8, clone RP11-769H18, complete sequence
          Length = 155821

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 120    cctccctttcatcctttcct 139
              ||||||||||||||||||||
Sbjct: 118012 cctccctttcatcctttcct 118031
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>gb|AC084257.2| Homo sapiens chromosome 8, clone RP1-164F9, complete sequence
          Length = 97751

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 120   cctccctttcatcctttcct 139
             ||||||||||||||||||||
Sbjct: 72069 cctccctttcatcctttcct 72050
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 270     tccaccaggaccataaccagtgat 293
               ||||||| ||||||||||||||||
Sbjct: 3932554 tccaccaagaccataaccagtgat 3932531
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>gb|AC087433.4|AC087433 Homo sapiens chromosome 15 clone RP11-101J17 and RP11-501G11 map
             15q21.1, complete sequence
          Length = 185145

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 298   tttgataacgtcactgacat 317
             ||||||||||||||||||||
Sbjct: 61851 tttgataacgtcactgacat 61832
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>gb|AC007904.6|AC007904 Drosophila melanogaster, chromosome 3R, region 88B-88B, BAC clone
              BACR01H04, complete sequence
          Length = 190325

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 549    cttctggaagagagtctacc 568
              ||||||||||||||||||||
Sbjct: 169372 cttctggaagagagtctacc 169391
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>gb|AC154592.2| Mus musculus BAC clone RP23-249J17 from chromosome 14, complete
             sequence
          Length = 211647

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 595   gctgcagaaacccacttctg 614
             ||||||||||||||||||||
Sbjct: 78065 gctgcagaaacccacttctg 78046
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>gb|AC079154.5| Homo sapiens BAC clone RP11-314E14 from 2, complete sequence
          Length = 175387

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 177    actagagaagagaggccaagaact 200
              ||||||||||||||| ||||||||
Sbjct: 142667 actagagaagagaggacaagaact 142644
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>gb|AC018880.6| Homo sapiens BAC clone RP11-336P15 from 2, complete sequence
          Length = 127025

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 418   cttggtggttaacgttcaagttcttatt 445
             ||||||||||||| ||||| ||||||||
Sbjct: 84297 cttggtggttaacattcaacttcttatt 84270
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>dbj|AP003019.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0035I03
          Length = 153749

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 270   tccaccaggaccataaccagtgat 293
             ||||||| ||||||||||||||||
Sbjct: 38430 tccaccaagaccataaccagtgat 38407
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>dbj|AB046473.2| Eurypharynx pelecanoides mitochondrial DNA, compete genome
          Length = 18978

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 412   gctcggcttggtggttaacg 431
             ||||||||||||||||||||
Sbjct: 17572 gctcggcttggtggttaacg 17553
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>dbj|AK066933.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091F19, full
           insert sequence
          Length = 2738

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 270 tccaccaggaccataaccagtgat 293
           ||||||| ||||||||||||||||
Sbjct: 814 tccaccaagaccataaccagtgat 791
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>gb|AE003704.3| Drosophila melanogaster chromosome 3R, section 42 of 118 of the
             complete sequence
          Length = 220679

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 549   cttctggaagagagtctacc 568
             ||||||||||||||||||||
Sbjct: 29105 cttctggaagagagtctacc 29124
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>gb|U23446.1|DMU23446 Drosophila melanogaster trithorax gene, regulatory 5' region
          Length = 2927

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 549 cttctggaagagagtctacc 568
           ||||||||||||||||||||
Sbjct: 640 cttctggaagagagtctacc 621
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>dbj|AB012766.1| Oryza sativa gene for ovp2, complete cds
          Length = 5985

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 270  tccaccaggaccataaccagtgat 293
            ||||||| ||||||||||||||||
Sbjct: 3434 tccaccaagaccataaccagtgat 3411
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>dbj|D16387.1| Asterina pectinifera mitochondrial DNA, complete genome
          Length = 16260

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 50   aagttcttgtaagattgaaa 69
            ||||||||||||||||||||
Sbjct: 3906 aagttcttgtaagattgaaa 3887
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>dbj|D45384.1| Oryza sativa mRNA for vacuolar H+-pyrophosphatase, complete cds
          Length = 2710

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 270 tccaccaggaccataaccagtgat 293
           ||||||| ||||||||||||||||
Sbjct: 799 tccaccaagaccataaccagtgat 776


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,237,637
Number of Sequences: 3902068
Number of extensions: 6237637
Number of successful extensions: 112751
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 112577
Number of HSP's gapped (non-prelim): 171
length of query: 721
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 698
effective length of database: 17,143,297,704
effective search space: 11966021797392
effective search space used: 11966021797392
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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