ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd15p16 |
|---|---|
| Clone Library Name | barley_pub |
>UMP3_ARATH (Q9LEV3) Protein At5g10860, mitochondrial precursor| Length = 206 Score = 154 bits (389), Expect(2) = 4e-37 Identities = 78/92 (84%), Positives = 84/92 (91%) Frame = -2 Query: 690 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVKPDTRVLQAMQLMTDKRIRHIPVISGAQM 511 DYLRKIIVQGRSSKSTKVGDIMTEENKLITV P+T+VL+AMQLMTD RIRHIPVI M Sbjct: 115 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVTPETKVLRAMQLMTDNRIRHIPVIKDKGM 174 Query: 510 MGMVSIGDVVRAVVSEHKEELNRLNAFIQGGY 415 +GMVSIGDVVRAVV EH+EEL RLNA+IQGGY Sbjct: 175 IGMVSIGDVVRAVVHEHREELQRLNAYIQGGY 206 Score = 20.8 bits (42), Expect(2) = 4e-37 Identities = 8/10 (80%), Positives = 10/10 (100%) Frame = -3 Query: 716 DSVYDAVKSI 687 D+VYDAVKS+ Sbjct: 79 DTVYDAVKSM 88
>Y525_METKA (P50100) Hypothetical protein MK0525 (OrfX)| Length = 196 Score = 47.0 bits (110), Expect = 6e-05 Identities = 26/87 (29%), Positives = 55/87 (63%), Gaps = 4/87 (4%) Frame = -2 Query: 690 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVKPDTRVLQAMQLMTDKRIRHIPVI-SGAQ 514 D + K++ QG++ DIM++ +ITV+ D V +A++LM DK IR +P++ + Sbjct: 55 DLVIKVVSQGKNPDEVIARDIMSQP--VITVEEDMEVNEAVKLMVDKGIRRLPIVDDNGK 112 Query: 513 MMGMVSIGDVVRA---VVSEHKEELNR 442 ++G+V++ D+++ +V+ +EE+ + Sbjct: 113 LIGIVTMQDILQVEPYLVATIEEEMKK 139
>YR33_THEPE (P15889) Hypothetical 33.4 kDa protein in ribosomal RNA operon| Length = 300 Score = 45.8 bits (107), Expect = 1e-04 Identities = 22/60 (36%), Positives = 41/60 (68%) Frame = -2 Query: 642 KVGDIMTEENKLITVKPDTRVLQAMQLMTDKRIRHIPVISGAQMMGMVSIGDVVRAVVSE 463 KV +IMT E ++ + P + + M++M+++RIR +P++SG ++ G+V+I DV+ V E Sbjct: 147 KVKEIMTSE--VVYLSPMDSLFEGMRVMSERRIRRLPLVSGEELRGIVTIKDVLSYVSRE 204 Score = 30.4 bits (67), Expect = 5.7 Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 1/44 (2%) Frame = -2 Query: 609 LITVKPDTRVLQAMQLMTDKRIRHIPVISGAQMM-GMVSIGDVV 481 L V +RVL + M R+RH+P++ ++ GMVS D+V Sbjct: 14 LAVVPSSSRVLDVLVAMGRNRVRHVPLVDERGVLKGMVSARDLV 57
>Y1426_METJA (Q58821) Hypothetical protein MJ1426| Length = 168 Score = 44.3 bits (103), Expect = 4e-04 Identities = 22/65 (33%), Positives = 40/65 (61%), Gaps = 1/65 (1%) Frame = -2 Query: 660 RSSKSTKVGDIMTEENKLITVKPDTRVLQAMQLMTDKRIRHIPVISG-AQMMGMVSIGDV 484 +++ TKV D+MT K+I KPD + A +LM I+ +PV+ ++G+V+ GD+ Sbjct: 106 KNALKTKVRDVMTR--KVIVAKPDMTINDAAKLMVKNNIKRLPVVDDEGNLIGIVTRGDL 163 Query: 483 VRAVV 469 + A++ Sbjct: 164 IEALI 168
>Y653_METJA (Q58069) Hypothetical protein MJ0653| Length = 194 Score = 43.1 bits (100), Expect = 8e-04 Identities = 21/68 (30%), Positives = 41/68 (60%), Gaps = 3/68 (4%) Frame = -2 Query: 672 IVQGRSSKSTKVGDIMTEE---NKLITVKPDTRVLQAMQLMTDKRIRHIPVISGAQMMGM 502 IV+ SK+ K D++ EE K+IT+ + + +A ++M I+ +PV+ +++G+ Sbjct: 58 IVKRVVSKNLKPKDVLAEEVMSKKIITIPQNASITEAAKIMATHGIKRLPVVKDGELVGI 117 Query: 501 VSIGDVVR 478 V+ D+VR Sbjct: 118 VTQSDIVR 125
>YBP3_ACIAM (P32987) Hypothetical 17.7 kDa protein in bps2 3'region (ORF3)| Length = 164 Score = 42.4 bits (98), Expect = 0.001 Identities = 27/87 (31%), Positives = 49/87 (56%), Gaps = 3/87 (3%) Frame = -2 Query: 672 IVQGRSSKS--TKVGDIMTEENKLITVKPDTRVLQAMQLMTDKRIRHIPVI-SGAQMMGM 502 IV+ S++ + V MT++ K +T DT V A+ +M + RH+P+I S ++ G+ Sbjct: 55 IVKAASNRDIDSPVEKYMTKDVKGVT--EDTEVTDALDIMLNNGFRHLPIIKSNGKLYGI 112 Query: 501 VSIGDVVRAVVSEHKEELNRLNAFIQG 421 VSI D+ RA++ H + + ++G Sbjct: 113 VSIRDLARALLDVHTMQFGKPAEEVKG 139
>Y450_METJA (Q57892) Hypothetical protein MJ0450| Length = 186 Score = 41.6 bits (96), Expect = 0.002 Identities = 20/87 (22%), Positives = 51/87 (58%), Gaps = 3/87 (3%) Frame = -2 Query: 690 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVKPDTRVLQAMQLMTDKRIRHIPVISGAQM 511 D ++K++++ KV DI + KL+T+ P+T + +A+++M + + ++ ++ Sbjct: 57 DIIKKVLIRKLPPDKVKVEDISS--GKLVTIPPNTTIDEALEIMNKYKTNELFIVDDGKI 114 Query: 510 MGMVSIGDVVR---AVVSEHKEELNRL 439 +G+++ D+++ ++S KE +N L Sbjct: 115 VGVITEEDLIKIAPEIISTLKELVNYL 141
>Y1546_AQUAE (O67500) Hypothetical phosphosugar isomerase aq_1546| Length = 322 Score = 41.2 bits (95), Expect = 0.003 Identities = 23/74 (31%), Positives = 47/74 (63%), Gaps = 1/74 (1%) Frame = -2 Query: 684 LRKIIVQGRSSKSTKVGDIMTEENKLITVKPDTRVLQAMQLMTDKRIRHIPVISGA-QMM 508 LR+ + +G S ++T+ D+MT+ K T+KPD L+A++ M D I + V++ + + Sbjct: 251 LRRFVNRGGSFENTRAKDVMTKNPK--TIKPDELALKALRKMEDHNITVLIVVNEENEPI 308 Query: 507 GMVSIGDVVRAVVS 466 G++ + D+++A +S Sbjct: 309 GILHMHDILKAELS 322
>YHCV_BACSU (P54606) Hypothetical protein yhcV| Length = 140 Score = 40.4 bits (93), Expect = 0.005 Identities = 21/69 (30%), Positives = 40/69 (57%) Frame = -2 Query: 690 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVKPDTRVLQAMQLMTDKRIRHIPVISGAQM 511 D + QGR + T V ++M+ E L++ P+ + A QLM +IR +P++ + Sbjct: 52 DIALRTTAQGRDGQ-TPVSEVMSTE--LVSGNPNMSLEDASQLMAQHQIRRLPIVDQNNL 108 Query: 510 MGMVSIGDV 484 +G+V++GD+ Sbjct: 109 VGIVALGDL 117 Score = 30.4 bits (67), Expect = 5.7 Identities = 16/64 (25%), Positives = 32/64 (50%) Frame = -2 Query: 645 TKVGDIMTEENKLITVKPDTRVLQAMQLMTDKRIRHIPVISGAQMMGMVSIGDVVRAVVS 466 + V D MT + + TV P+ + +A LM + IPV+ + GM++ D+ + Sbjct: 2 SSVKDTMTTQ--VATVSPNQTIQEAASLMKQHNVGAIPVVEQGVLKGMLTDRDIALRTTA 59 Query: 465 EHKE 454 + ++ Sbjct: 60 QGRD 63
>IMDH_TRIFO (P50097) Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) (IMP| dehydrogenase) (IMPDH) (IMPD) Length = 503 Score = 38.5 bits (88), Expect = 0.021 Identities = 16/44 (36%), Positives = 30/44 (68%) Frame = -2 Query: 645 TKVGDIMTEENKLITVKPDTRVLQAMQLMTDKRIRHIPVISGAQ 514 TKV D+MT +KL+T DT++ +A +++ +K++ +P+I Q Sbjct: 161 TKVSDMMTPFSKLVTAHQDTKLSEANKIIWEKKLNALPIIDDDQ 204
>YE45_SCHPO (O13965) Hypothetical protein C24C9.05c in chromosome I| Length = 730 Score = 37.7 bits (86), Expect = 0.035 Identities = 27/87 (31%), Positives = 43/87 (49%), Gaps = 3/87 (3%) Frame = -2 Query: 690 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVKPDTRVLQAMQLMTDKRIRHIPVISGAQM 511 D + + G +++ T + DIM+ IT DTR A+ LM + + RH+PV+S Sbjct: 114 DIATRCVGAGLNARQTLIADIMSTSPLCIT--SDTRFDDALLLMIEHKFRHLPVVSDGGP 171 Query: 510 MGMV-SIGDVVRAVVSEH--KEELNRL 439 G GDV+ + +E LNR+ Sbjct: 172 DGSAGDEGDVIGIINMRACLREPLNRI 198
>Y188_METJA (Q57647) Hypothetical protein MJ0188| Length = 265 Score = 37.4 bits (85), Expect = 0.046 Identities = 18/56 (32%), Positives = 33/56 (58%) Frame = -2 Query: 648 STKVGDIMTEENKLITVKPDTRVLQAMQLMTDKRIRHIPVISGAQMMGMVSIGDVV 481 S KV + MT+ K++TV D V ++L+ + PV+ +++G+VS+ D+V Sbjct: 2 SVKVSEYMTK--KVVTVSKDNTVKDVIKLLKETGHNSFPVVENGKLIGIVSVHDIV 55 Score = 32.3 bits (72), Expect = 1.5 Identities = 14/61 (22%), Positives = 33/61 (54%), Gaps = 1/61 (1%) Frame = -2 Query: 642 KVGDIMTEENKLITVKPDTRVLQAMQLMTDKRIRHIPVISGA-QMMGMVSIGDVVRAVVS 466 KV ++MT+ ++ PD ++ ++M +PV+ ++G++S DV+R+ + Sbjct: 62 KVENVMTKRKDMVVTTPDANIMDVGRIMFRTGFSKLPVVDEENNLVGIISNMDVIRSQIE 121 Query: 465 E 463 + Sbjct: 122 K 122
>PPAC_THEMA (Q9WZ56) Probable manganese-dependent inorganic pyrophosphatase (EC| 3.6.1.1) (Pyrophosphate phospho-hydrolase) (PPase) Length = 548 Score = 37.0 bits (84), Expect = 0.061 Identities = 18/52 (34%), Positives = 29/52 (55%) Frame = -2 Query: 606 ITVKPDTRVLQAMQLMTDKRIRHIPVISGAQMMGMVSIGDVVRAVVSEHKEE 451 I V PDT LM + I+++PV+S +M+G+V+ ++ R V K E Sbjct: 82 IFVTPDTSAYDVAMLMESRGIKNVPVVSKEKMIGVVTESNIARVYVRRLKIE 133
>IMDH_HAEIN (P44334) Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) (IMP| dehydrogenase) (IMPDH) (IMPD) Length = 488 Score = 36.2 bits (82), Expect = 0.10 Identities = 23/86 (26%), Positives = 46/86 (53%), Gaps = 8/86 (9%) Frame = -2 Query: 672 IVQGRSSKSTK-----VGDIMTEENKLITVKPDTRVLQAMQLMTDKRIRHIPVISGA-QM 511 I+ GR ++ K V +MT++ L+TVK + ++LM R+ + V++ + ++ Sbjct: 134 IITGRDTRFVKDLSKTVSQVMTKKEDLVTVKEGASREEILELMHQHRVEKVLVVNDSFKL 193 Query: 510 MGMVSIGDVVRAVVSEH--KEELNRL 439 GM+++ D +A + K+E RL Sbjct: 194 KGMITVKDFQKAEQKPNACKDEFGRL 219
>Y1225_METJA (Q58622) Hypothetical protein MJ1225| Length = 280 Score = 33.9 bits (76), Expect = 0.51 Identities = 13/51 (25%), Positives = 32/51 (62%), Gaps = 2/51 (3%) Frame = -2 Query: 627 MTEENKLITVKPDTRVLQAMQLMTDKRIRHIPVISGA--QMMGMVSIGDVV 481 + + K++TV P T + +A+ M + + R +PV++ +++G+++ D+V Sbjct: 8 IAQNKKIVTVYPTTTIRKALMTMNENKYRRLPVVNAGNNKVVGIITSMDIV 58
>IMDH_PYRFU (P42851) Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) (IMP| dehydrogenase) (IMPDH) (IMPD) Length = 485 Score = 33.9 bits (76), Expect = 0.51 Identities = 19/72 (26%), Positives = 43/72 (59%), Gaps = 1/72 (1%) Frame = -2 Query: 693 IDYLRKIIVQGRSSKSTKVGDIMTEENKLITVKPDTRVLQAMQLMTDKRIRHIPVIS-GA 517 + + K + R ++ K ++MT E +ITV V +A+++M + RI +PV++ Sbjct: 136 VGIITKKDIAAREGRTVK--ELMTRE--VITVPESVDVEEALKIMMENRIDRLPVVNEDG 191 Query: 516 QMMGMVSIGDVV 481 +++G++++ D+V Sbjct: 192 KLVGLITMSDLV 203
>Y1404_METJA (Q58799) Hypothetical protein MJ1404| Length = 421 Score = 33.9 bits (76), Expect = 0.51 Identities = 16/51 (31%), Positives = 28/51 (54%) Frame = -2 Query: 609 LITVKPDTRVLQAMQLMTDKRIRHIPVISGAQMMGMVSIGDVVRAVVSEHK 457 LITV D A ++M + IR +PV+ G + G+V+ D+++ + K Sbjct: 221 LITVDVDASAADAARVMQEYDIRGVPVVKGKSLRGIVTRLDIIKYIADLKK 271 Score = 31.6 bits (70), Expect = 2.5 Identities = 22/70 (31%), Positives = 40/70 (57%), Gaps = 3/70 (4%) Frame = -2 Query: 639 VGDIMTEENKLITVKPDTRVLQAMQLMTDKRIRHIPVI---SGAQMMGMVSIGDVVRAVV 469 V +IMT++ ++TV PDT V +A+ +M + H+ V+ G + ++S+ D++ A Sbjct: 9 VKEIMTKD--VVTVTPDTPVSKALGIMEENGFHHLIVVDKKDGKEEYYLISMRDLLLA-- 64 Query: 468 SEHKEELNRL 439 S EE+ L Sbjct: 65 SSTDEEVRSL 74
>IMDH_PYRHO (O58045) Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) (IMP| dehydrogenase) (IMPDH) (IMPD) Length = 486 Score = 33.9 bits (76), Expect = 0.51 Identities = 20/72 (27%), Positives = 42/72 (58%), Gaps = 1/72 (1%) Frame = -2 Query: 693 IDYLRKIIVQGRSSKSTKVGDIMTEENKLITVKPDTRVLQAMQLMTDKRIRHIPVI-SGA 517 + + K + R K K ++MT+E +ITV V +A+++M + RI +PV+ Sbjct: 136 VGIITKKDIAAREGKLVK--ELMTKE--VITVPESIEVEEALKIMIENRIDRLPVVDERG 191 Query: 516 QMMGMVSIGDVV 481 +++G++++ D+V Sbjct: 192 KLVGLITMSDLV 203
>KING1_ARATH (Q8LBB2) SNF1-related protein kinase regulatory gamma subunit 1| (AKIN gamma1) (AKING1) Length = 424 Score = 33.5 bits (75), Expect = 0.67 Identities = 21/56 (37%), Positives = 34/56 (60%), Gaps = 2/56 (3%) Frame = -2 Query: 645 TKVGDIMTEENKLITVKPDTRVLQAMQLMTDKRIRHIPVI--SGAQMMGMVSIGDV 484 ++VG + ++ +I + D VLQA +LM KRI IPVI + + +G +S+ DV Sbjct: 256 SEVGLPIMSKDHIIKIYEDEPVLQAFKLMRRKRIGGIPVIERNSEKPVGNISLRDV 311
>IMDH_PYRAB (Q9UY49) Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) (IMP| dehydrogenase) (IMPDH) (IMPD) Length = 485 Score = 33.1 bits (74), Expect = 0.87 Identities = 19/72 (26%), Positives = 43/72 (59%), Gaps = 1/72 (1%) Frame = -2 Query: 693 IDYLRKIIVQGRSSKSTKVGDIMTEENKLITVKPDTRVLQAMQLMTDKRIRHIPVI-SGA 517 + + K + R K K ++MT++ +ITV + V +A+++M + RI +PV+ Sbjct: 136 VGIISKKDIAAREGKLVK--ELMTKD--VITVPENIEVEEALKIMIENRIDRLPVVDKEG 191 Query: 516 QMMGMVSIGDVV 481 +++G++++ D+V Sbjct: 192 RLIGLITMSDLV 203
>IMDH_AQUAE (O67820) Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) (IMP| dehydrogenase) (IMPDH) (IMPD) Length = 490 Score = 33.1 bits (74), Expect = 0.87 Identities = 13/27 (48%), Positives = 20/27 (74%) Frame = -2 Query: 606 ITVKPDTRVLQAMQLMTDKRIRHIPVI 526 +TVKPDTRV +A+ +M +I +PV+ Sbjct: 101 VTVKPDTRVKEALDIMAKYKISGVPVV 127
>RACA_BACHD (Q9KC68) Chromosome-anchoring protein racA| Length = 174 Score = 32.7 bits (73), Expect = 1.1 Identities = 17/82 (20%), Positives = 40/82 (48%) Frame = -2 Query: 669 VQGRSSKSTKVGDIMTEENKLITVKPDTRVLQAMQLMTDKRIRHIPVISGAQMMGMVSIG 490 +Q + K+ D++ EEN+ + KP+T+ + A + + + + I+ + Sbjct: 53 IQNQLKSGKKMRDVVIEENEQLIQKPETQPMVATEQYEQRTKQFMEKIAELEKQLSQKAD 112 Query: 489 DVVRAVVSEHKEELNRLNAFIQ 424 DVV + +H+ E++ + +Q Sbjct: 113 DVVSYQILKHRAEIDEMFKTLQ 134
>Y1678_HAEIN (P45313) Probable phosphosugar isomerase HI1678 (EC 5.-.-.-)| Length = 337 Score = 32.7 bits (73), Expect = 1.1 Identities = 19/67 (28%), Positives = 35/67 (52%) Frame = -2 Query: 642 KVGDIMTEENKLITVKPDTRVLQAMQLMTDKRIRHIPVISGAQMMGMVSIGDVVRAVVSE 463 KV D M + +L T+ P T + +M + R+ V+ Q+ G+++ GD+ RA+ + Sbjct: 222 KVKDQM--QTRLPTILPTTNFTDCLTVMNEGRMGVALVMENEQLKGIITDGDIRRALTAN 279 Query: 462 HKEELNR 442 LN+ Sbjct: 280 GAGTLNK 286
>CLCN6_MOUSE (O35454) Chloride channel protein 6 (ClC-6)| Length = 870 Score = 31.2 bits (69), Expect = 3.3 Identities = 18/60 (30%), Positives = 31/60 (51%) Frame = -2 Query: 603 TVKPDTRVLQAMQLMTDKRIRHIPVISGAQMMGMVSIGDVVRAVVSEHKEELNRLNAFIQ 424 TV P+T V Q L +RH+PV++ ++G++V +++ H N N F+Q Sbjct: 814 TVSPNTHVSQVFNLFRTMGLRHLPVVN--------AVGEIV-GIITRH----NLTNEFLQ 860
>IMDH_LEIDO (P21620) Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) (IMP| dehydrogenase) (IMPDH) (IMPD) Length = 514 Score = 31.2 bits (69), Expect = 3.3 Identities = 18/74 (24%), Positives = 38/74 (51%), Gaps = 1/74 (1%) Frame = -2 Query: 693 IDYLRKIIVQGRSSKSTKVGDIMTEENKLITVKPDTRVLQAMQLMTDKRIRHIPVIS-GA 517 IDY++ +K T V +MT K+ + ++ +AM ++ R ++P+++ Sbjct: 161 IDYVK--------NKDTPVSAVMTRREKMTVERAPIQLEEAMDVLNRSRYGYLPIVNEND 212 Query: 516 QMMGMVSIGDVVRA 475 +++ + S D VRA Sbjct: 213 EVVNLCSRRDAVRA 226
>Y100_METJA (Q57564) Hypothetical protein MJ0100| Length = 509 Score = 31.2 bits (69), Expect = 3.3 Identities = 17/81 (20%), Positives = 43/81 (53%), Gaps = 1/81 (1%) Frame = -2 Query: 696 QIDYLRKIIVQGRSSKSTKVGDIMTEENKLITVKPDTRVLQAMQLMTDKRIRHIPVI-SG 520 ++D L + + S T V DI+++ IT + +++A +++ I H+P++ Sbjct: 371 RVDTLGRAENKPMKSPITLVKDILSKPP--ITAHSNISIMEAAKILIKHNINHLPIVDEH 428 Query: 519 AQMMGMVSIGDVVRAVVSEHK 457 +++G+++ D+ +A+ K Sbjct: 429 GKLVGIITSWDIAKALAQNKK 449
>Y392_METJA (Q57837) Hypothetical protein MJ0392 (EC 3.4.24.-)| Length = 339 Score = 30.8 bits (68), Expect = 4.3 Identities = 18/67 (26%), Positives = 32/67 (47%) Frame = -2 Query: 651 KSTKVGDIMTEENKLITVKPDTRVLQAMQLMTDKRIRHIPVISGAQMMGMVSIGDVVRAV 472 K+ K DIMT +T PD + + + M + PV+ +++G + IG++ Sbjct: 218 KNIKAKDIMTPNPVYVT--PDMSIEEFLDFMLKHKYFGYPVVENGKLVGCIGIGNI---- 271 Query: 471 VSEHKEE 451 HK+E Sbjct: 272 ---HKKE 275
>IMDH_MYCTU (P65167) Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) (IMP| dehydrogenase) (IMPDH) (IMPD) Length = 529 Score = 30.4 bits (67), Expect = 5.7 Identities = 16/59 (27%), Positives = 34/59 (57%), Gaps = 1/59 (1%) Frame = -2 Query: 651 KSTKVGDIMTEENKLITVKPDTRVLQAMQLMTDKRIRHIPVISG-AQMMGMVSIGDVVR 478 +S +V ++MT+ LIT + A+ L+ +I +PV+ G ++ G++++ D V+ Sbjct: 181 QSKQVAEVMTKA-PLITAQEGVSASAALGLLRRNKIEKLPVVDGRGRLTGLITVKDFVK 238
>IMDH_MYCBO (P65168) Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) (IMP| dehydrogenase) (IMPDH) (IMPD) Length = 529 Score = 30.4 bits (67), Expect = 5.7 Identities = 16/59 (27%), Positives = 34/59 (57%), Gaps = 1/59 (1%) Frame = -2 Query: 651 KSTKVGDIMTEENKLITVKPDTRVLQAMQLMTDKRIRHIPVISG-AQMMGMVSIGDVVR 478 +S +V ++MT+ LIT + A+ L+ +I +PV+ G ++ G++++ D V+ Sbjct: 181 QSKQVAEVMTKA-PLITAQEGVSASAALGLLRRNKIEKLPVVDGRGRLTGLITVKDFVK 238
>CLCN6_RABIT (Q9TT16) Chloride channel protein 6 (ClC-6)| Length = 869 Score = 30.4 bits (67), Expect = 5.7 Identities = 18/63 (28%), Positives = 31/63 (49%) Frame = -2 Query: 603 TVKPDTRVLQAMQLMTDKRIRHIPVISGAQMMGMVSIGDVVRAVVSEHKEELNRLNAFIQ 424 TV P+T V Q L +RH+PV++ ++G++V +V+ H L A ++ Sbjct: 813 TVSPNTHVSQVFNLFRTMGLRHLPVVN--------AVGEIV-GIVTRHNLTYEFLQARLR 863 Query: 423 GGY 415 Y Sbjct: 864 QHY 866
>CLCN6_HUMAN (P51797) Chloride channel protein 6 (ClC-6)| Length = 869 Score = 30.0 bits (66), Expect = 7.4 Identities = 17/63 (26%), Positives = 31/63 (49%) Frame = -2 Query: 603 TVKPDTRVLQAMQLMTDKRIRHIPVISGAQMMGMVSIGDVVRAVVSEHKEELNRLNAFIQ 424 TV P+T V Q L +RH+PV++ ++G++V +++ H L A ++ Sbjct: 813 TVSPNTHVSQVFNLFRTMGLRHLPVVN--------AVGEIV-GIITRHNLTYEFLQARLR 863 Query: 423 GGY 415 Y Sbjct: 864 QHY 866
>Y868_METJA (Q58278) Hypothetical protein MJ0868| Length = 127 Score = 29.6 bits (65), Expect = 9.7 Identities = 14/45 (31%), Positives = 30/45 (66%), Gaps = 2/45 (4%) Frame = -2 Query: 606 ITVKPDTRVLQAMQLMTDKRIRHIPVISGAQ--MMGMVSIGDVVR 478 ITV P+ + +A+++M +K I H+ V S + ++G++S D+++ Sbjct: 76 ITVSPEAPLEKAVEIMAEKGIHHLYVKSPCEDKIVGVLSSKDIIK 120
>IMDH_ACICA (P31002) Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) (IMP| dehydrogenase) (IMPDH) (IMPD) Length = 488 Score = 29.6 bits (65), Expect = 9.7 Identities = 22/86 (25%), Positives = 44/86 (51%), Gaps = 8/86 (9%) Frame = -2 Query: 672 IVQGRSSK-----STKVGDIMTEENKLITVKPDTRVLQAMQLMTDKRIRHIPVISGA-QM 511 IV GR ++ V +IMT +++L+TV+ L+ RI + V+ + ++ Sbjct: 132 IVTGRDTRFETNLEQPVSNIMTGQDRLVTVREGESKENIQALLQKHRIEKVLVVGESNEL 191 Query: 510 MGMVSIGDVVRA--VVSEHKEELNRL 439 G++++ D +A + K++L RL Sbjct: 192 KGLITVTDFRKAESYPNSCKDDLGRL 217
>HRCA_MYCPU (Q98R68) Heat-inducible transcription repressor hrcA| Length = 347 Score = 29.6 bits (65), Expect = 9.7 Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 2/60 (3%) Frame = -2 Query: 684 LRKII--VQGRSSKSTKVGDIMTEENKLITVKPDTRVLQAMQLMTDKRIRHIPVISGAQM 511 L KII ++ S T ++ EEN I ++PD + ++ D +IR I V+ +M Sbjct: 256 LTKIIKLIESTSIWQTIEDNLEEEENIKIEIRPDNSSFLSKKISIDNKIREISVVGSKKM 315
>R34K_CLOPA (P23160) 34.2 kDa protein in rubredoxin operon (EC 1.6.4.-) (ORF A)| Length = 308 Score = 29.6 bits (65), Expect = 9.7 Identities = 20/95 (21%), Positives = 45/95 (47%), Gaps = 6/95 (6%) Frame = -2 Query: 681 RKIIVQGRSSKSTKVGDIMTEENKLITVKPDTRVLQAMQLMTDKRIRH--IPVISGAQMM 508 + ++V G + + + +T+ + IT+ LQA + D+ +H + +I +++ Sbjct: 147 KDLVVVGGGNSAVEAAIFLTKYARNITIVHQFDYLQAQKYSQDELFKHKNVKIIWDSEIR 206 Query: 507 GMVSIGDVVRAVV----SEHKEELNRLNAFIQGGY 415 +V ++ + VV ++ K EL F+ GY Sbjct: 207 NIVGENEIEKIVVENVKTKQKTELKADGVFVYIGY 241 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 95,572,365 Number of Sequences: 219361 Number of extensions: 1955634 Number of successful extensions: 5228 Number of sequences better than 10.0: 35 Number of HSP's better than 10.0 without gapping: 5011 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5227 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 7309604013 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
