ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd16e20 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC104272.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1045_C06, complete sequence Length = 143130 Score = 123 bits (62), Expect = 8e-25 Identities = 101/114 (88%) Strand = Plus / Plus Query: 415 ctcccttacatggtatcatcatcaaatattgtggaaagcacaagcccacgggcaaatgca 474 |||||||||| | ||||||| |||||||| || || ||||||||||||||| ||||| | Sbjct: 66428 ctcccttacaagttatcatcctcaaatatcgtcgagagcacaagcccacggacaaattta 66487 Query: 475 ctcctttgagcacgctccttctgatccttctcggacagagatgtttcagctctg 528 ||||||||||| | |||||||||||||||||| |||||||||| |||||||||| Sbjct: 66488 ctcctttgagccctctccttctgatccttctccgacagagatggttcagctctg 66541
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 123 bits (62), Expect = 8e-25 Identities = 101/114 (88%) Strand = Plus / Plus Query: 415 ctcccttacatggtatcatcatcaaatattgtggaaagcacaagcccacgggcaaatgca 474 |||||||||| | ||||||| |||||||| || || ||||||||||||||| ||||| | Sbjct: 16853932 ctcccttacaagttatcatcctcaaatatcgtcgagagcacaagcccacggacaaattta 16853991 Query: 475 ctcctttgagcacgctccttctgatccttctcggacagagatgtttcagctctg 528 ||||||||||| | |||||||||||||||||| |||||||||| |||||||||| Sbjct: 16853992 ctcctttgagccctctccttctgatccttctccgacagagatggttcagctctg 16854045
>dbj|AK101263.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033032J06, full insert sequence Length = 1287 Score = 121 bits (61), Expect = 3e-24 Identities = 100/113 (88%) Strand = Plus / Minus Query: 415 ctcccttacatggtatcatcatcaaatattgtggaaagcacaagcccacgggcaaatgca 474 |||||||||| | ||||||| |||||||| || || ||||||||||||||| ||||| | Sbjct: 853 ctcccttacaagttatcatcctcaaatatcgtcgagagcacaagcccacggacaaattta 794 Query: 475 ctcctttgagcacgctccttctgatccttctcggacagagatgtttcagctct 527 ||||||||||| | |||||||||||||||||| |||||||||| ||||||||| Sbjct: 793 ctcctttgagccctctccttctgatccttctccgacagagatggttcagctct 741
>dbj|AK061141.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-208-C03, full insert sequence Length = 1248 Score = 121 bits (61), Expect = 3e-24 Identities = 100/113 (88%) Strand = Plus / Minus Query: 415 ctcccttacatggtatcatcatcaaatattgtggaaagcacaagcccacgggcaaatgca 474 |||||||||| | ||||||| |||||||| || || ||||||||||||||| ||||| | Sbjct: 784 ctcccttacaagttatcatcctcaaatatcgtcgagagcacaagcccacggacaaattta 725 Query: 475 ctcctttgagcacgctccttctgatccttctcggacagagatgtttcagctct 527 ||||||||||| | |||||||||||||||||| |||||||||| ||||||||| Sbjct: 724 ctcctttgagccctctccttctgatccttctccgacagagatggttcagctct 672
>gb|AY106338.1| Zea mays PCO074336 mRNA sequence Length = 849 Score = 58.0 bits (29), Expect = 4e-05 Identities = 80/97 (82%) Strand = Plus / Minus Query: 428 tatcatcatcaaatattgtggaaagcacaagcccacgggcaaatgcactcctttgagcac 487 ||||||||||||||||||| || ||||||||||| ||| | ||| ||||||||| | | Sbjct: 503 tatcatcatcaaatattgtcgagagcacaagccctcggacgaatttgctcctttgaaccc 444 Query: 488 gctccttctgatccttctcggacagagatgtttcagc 524 ||||||||||| ||||| |||| |||| |||||| Sbjct: 443 tttccttctgatctttctccgacaatgatggttcagc 407
>ref|XM_618560.2| PREDICTED: Bos taurus similar to glutamyl-prolyl tRNA synthetase (LOC538357), mRNA Length = 4673 Score = 48.1 bits (24), Expect = 0.039 Identities = 24/24 (100%) Strand = Plus / Plus Query: 429 atcatcatcaaatattgtggaaag 452 |||||||||||||||||||||||| Sbjct: 2373 atcatcatcaaatattgtggaaag 2396
>gb|AC115483.2| Drosophila melanogaster clone BACR20D18, complete sequence Length = 158241 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 255 catacataaatacatatacattc 277 ||||||||||||||||||||||| Sbjct: 149619 catacataaatacatatacattc 149641
>gb|AE003640.4| Drosophila melanogaster chromosome 2L, section 49 of 83 of the complete sequence Length = 271118 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 255 catacataaatacatatacattc 277 ||||||||||||||||||||||| Sbjct: 185584 catacataaatacatatacattc 185562
>emb|CR352249.24| Zebrafish DNA sequence from clone DKEY-97O18 in linkage group 7, complete sequence Length = 180142 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Minus Query: 255 catacataaatacatatacattcataa 281 ||||||||||| ||||||||||||||| Sbjct: 1040 catacataaatccatatacattcataa 1014
>gb|AC152451.5| Mus musculus BAC clone RP24-309M5 from chromosome 12, complete sequence Length = 145113 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 255 catacataaatacatatacattcata 280 |||||||| ||||||||||||||||| Sbjct: 80352 catacatacatacatatacattcata 80377
>gb|AC145589.3| Mus musculus BAC clone RP24-174M10 from chromosome Y, complete sequence Length = 152506 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Minus Query: 256 atacataaatacatatacattcataa 281 |||||||||||||||||||| ||||| Sbjct: 75130 atacataaatacatatacatacataa 75105
>gb|AC157379.7| Mus musculus chromosome 3, clone RP23-20F10, complete sequence Length = 183455 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Minus Query: 255 catacataaatacatatacattcata 280 |||||||| ||||||||||||||||| Sbjct: 94173 catacatatatacatatacattcata 94148
>gb|AC134459.4| Mus musculus BAC clone RP23-360L15 from chromosome 8, complete sequence Length = 211773 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 255 catacataaatacatatacattcata 280 ||||||||||||||||||||| |||| Sbjct: 88227 catacataaatacatatacatacata 88252
>emb|CR735143.13| Zebrafish DNA sequence from clone CH211-244P16 in linkage group 5, complete sequence Length = 147626 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Minus Query: 254 gcatacataaatacatatacattcat 279 ||||||||||||||||||||| |||| Sbjct: 95743 gcatacataaatacatatacagtcat 95718
>gb|AC122013.4| Mus musculus BAC clone RP24-357P7 from chromosome 12, complete sequence Length = 175788 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Minus Query: 255 catacataaatacatatacattcata 280 |||||||| ||||||||||||||||| Sbjct: 7062 catacatacatacatatacattcata 7037
>emb|AL592227.4| Human DNA sequence from clone RP11-32D4 on chromosome 9 Contains a CpG island, complete sequence Length = 55535 Score = 44.1 bits (22), Expect = 0.60 Identities = 28/30 (93%) Strand = Plus / Minus Query: 260 ataaatacatatacattcataactggatgg 289 |||||||||||||||||||| |||||||| Sbjct: 49958 ataaatacatatacattcattgctggatgg 49929
>emb|AL596136.5| Mouse DNA sequence from clone RP23-83I13 on chromosome 11 Contains the Rabep1 gene for rabaptin, RAB GTPase binding effector protein 1, a ribosomal protein 23a (Rpl23a) pseudogene, a ribosomal protein 23A (Rpl23a) pseudogene, the Nup88 gene for nucleoporin 88, four novel genes, the C1qbp gene for complement component 1 q subcomponent binding protein, the Dhx33 gene for DEAH (Asp-Glu-Ala-His) box polypeptide 33, a novel pseudogene, a CARD domain pseudogene and six CpG islands, complete sequence Length = 254116 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Minus Query: 254 gcatacataaatacatatacat 275 |||||||||||||||||||||| Sbjct: 215404 gcatacataaatacatatacat 215383
>gb|AC009476.3| Homo sapiens BAC clone RP11-207O14 from 2, complete sequence Length = 184406 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 255 catacataaatacatatacattcata 280 |||||||| ||||||||||||||||| Sbjct: 64316 catacatatatacatatacattcata 64341
>gb|AC004835.2|AC004835 Homo sapiens clone DJ0555N02, complete sequence Length = 121803 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 591 tacatttcaaaactcaaaaggtacaa 616 ||||||||||||||||||| |||||| Sbjct: 2181 tacatttcaaaactcaaaaagtacaa 2206
>emb|CR407703.23| Zebrafish DNA sequence from clone CH211-141H12 in linkage group 9, complete sequence Length = 150766 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 255 catacataaatacatatacattcata 280 ||||||||||||||||||||| |||| Sbjct: 91015 catacataaatacatatacatacata 91040
>emb|AL611985.22| Mouse DNA sequence from clone RP23-421E12 on chromosome 4, complete sequence Length = 219205 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 254 gcatacataaatacatatacattcat 279 ||||||||| |||||||||||||||| Sbjct: 157304 gcatacatatatacatatacattcat 157329
>gb|AC110544.13| Mus musculus chromosome 3, clone RP23-112A11, complete sequence Length = 201027 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 255 catacataaatacatatacat 275 ||||||||||||||||||||| Sbjct: 115958 catacataaatacatatacat 115978
>gb|AC161202.15| Mus musculus chromosome 8, clone RP23-479K12, complete sequence Length = 175459 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 255 catacataaatacatatacattcat 279 |||||||| |||||||||||||||| Sbjct: 40983 catacatatatacatatacattcat 41007
>gb|AE017308.1| Mycoplasma mobile 163K complete genome Length = 777079 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 568 aattattaaattatagcaaaa 588 ||||||||||||||||||||| Sbjct: 523439 aattattaaattatagcaaaa 523419
>gb|AC099035.2| Drosophila melanogaster clone BACR37H13, complete sequence Length = 175448 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 661 aaataatttaaaaatcctgat 681 ||||||||||||||||||||| Sbjct: 95520 aaataatttaaaaatcctgat 95540
>gb|AF241726.3| Homo sapiens chromosome X, clones RP5-819E23 and RP1-137P19, Map p11.4, complete sequences Length = 244978 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 536 accagacattcaatcaaatatttga 560 |||| |||||||||||||||||||| Sbjct: 95252 accacacattcaatcaaatatttga 95228
>gb|AC149876.2| Xenopus tropicalis clone CH216-166O21, complete sequence Length = 185995 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 255 catacataaatacatatacattcat 279 |||||||| |||||||||||||||| Sbjct: 12969 catacatacatacatatacattcat 12993
>gb|AC165137.1| Pan troglodytes chromosome X clone PTB-012N04 map human ortholog p11.4, complete sequence Length = 93431 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 536 accagacattcaatcaaatatttga 560 |||| |||||||||||||||||||| Sbjct: 53347 accacacattcaatcaaatatttga 53323
>gb|AC122325.4| Mus musculus BAC clone RP23-334H17 from chromosome 5, complete sequence Length = 184869 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 255 catacataaatacatatacat 275 ||||||||||||||||||||| Sbjct: 2043 catacataaatacatatacat 2063
>ref|XM_539166.2| PREDICTED: Canis familiaris similar to adenylate cyclase 8 (LOC482045), mRNA Length = 3842 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 314 gtgagcggcagtggcagcatg 334 ||||||||||||||||||||| Sbjct: 869 gtgagcggcagtggcagcatg 849
>gb|AC125057.5| Mus musculus BAC clone RP23-399K1 from chromosome 12, complete sequence Length = 182276 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 255 catacataaatacatatacattcat 279 ||||||| ||||||||||||||||| Sbjct: 95665 catacatcaatacatatacattcat 95689
>emb|Z78419.1|CEF26A3 Caenorhabditis elegans Cosmid F26A3, complete sequence Length = 38019 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 538 cagacattcaatcaaatatttgata 562 ||||||||||||||||||| ||||| Sbjct: 10626 cagacattcaatcaaatatgtgata 10650
>gb|AC125410.4| Mus musculus BAC clone RP23-146N3 from 3, complete sequence Length = 213701 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 255 catacataaatacatatacat 275 ||||||||||||||||||||| Sbjct: 101908 catacataaatacatatacat 101888
>gb|AC131942.1| Mus musculus BAC clone RP24-478A20 from 3, complete sequence Length = 209411 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 255 catacataaatacatatacattcat 279 ||||||||||||||||| ||||||| Sbjct: 157756 catacataaatacatatgcattcat 157732
>gb|AC111092.10| Mus musculus chromosome 12, clone RP23-168O9, complete sequence Length = 211926 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 666 atttaaaaatcctgatgagca 686 ||||||||||||||||||||| Sbjct: 39286 atttaaaaatcctgatgagca 39266
>gb|AC069562.51| Mus musculus strain C57BL/6J clone rp23-317e13 map 13, complete sequence Length = 215278 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 256 atacataaatacatatacattcata 280 |||||||||||||||||||| |||| Sbjct: 207785 atacataaatacatatacatacata 207809
>gb|AC156496.10| Mus musculus chromosome 7, clone RP24-246N21, complete sequence Length = 143815 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 254 gcatacataaatacatataca 274 ||||||||||||||||||||| Sbjct: 35870 gcatacataaatacatataca 35850
>gb|AC124955.34| Medicago truncatula clone mth2-12l24, complete sequence Length = 115804 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 30 atatatacataaaacatcaaa 50 ||||||||||||||||||||| Sbjct: 61099 atatatacataaaacatcaaa 61079
>gb|AC147405.7| Medicago truncatula clone mth2-146n5, complete sequence Length = 147062 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 30 atatatacataaaacatcaaa 50 ||||||||||||||||||||| Sbjct: 85964 atatatacataaaacatcaaa 85984
>emb|BX927158.14| Zebrafish DNA sequence from clone DKEY-106K1 in linkage group 5, complete sequence Length = 144909 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 255 catacataaatacatatacat 275 ||||||||||||||||||||| Sbjct: 73677 catacataaatacatatacat 73657
>gb|AC117454.5| Homo sapiens 3 BAC RP11-312P21 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 125001 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 256 atacataaatacatatacattcata 280 |||||||||||||||||||| |||| Sbjct: 77386 atacataaatacatatacatacata 77410
>gb|AC154747.2| Mus musculus BAC clone RP23-116N15 from chromosome 13, complete sequence Length = 209567 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 256 atacataaatacatatacattcata 280 |||||||||||||||||||| |||| Sbjct: 84672 atacataaatacatatacatacata 84696
>emb|CR936847.6| Mouse DNA sequence from clone DN-393H17 on chromosome 11, complete sequence Length = 170807 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 255 catacataaatacatatacat 275 ||||||||||||||||||||| Sbjct: 98430 catacataaatacatatacat 98410
>emb|CR450738.8| Zebrafish DNA sequence from clone DKEY-71L10 in linkage group 8, complete sequence Length = 101924 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 255 catacataaatacatatacat 275 ||||||||||||||||||||| Sbjct: 21812 catacataaatacatatacat 21832
>emb|CR354582.14| Zebrafish DNA sequence from clone CH211-215B24 in linkage group 8, complete sequence Length = 227074 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 255 catacataaatacatatacat 275 ||||||||||||||||||||| Sbjct: 60892 catacataaatacatatacat 60872
>gb|AC087588.10| Homo sapiens 12 BAC RP11-8P13 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 146167 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 255 catacataaatacatatacat 275 ||||||||||||||||||||| Sbjct: 114840 catacataaatacatatacat 114860
>gb|AC130810.14| Medicago truncatula clone mth2-36b14, complete sequence Length = 117901 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 30 atatatacataaaacatcaaa 50 ||||||||||||||||||||| Sbjct: 11570 atatatacataaaacatcaaa 11590
>gb|AC114791.3| Homo sapiens BAC clone RP11-658B24 from 4, complete sequence Length = 113268 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 260 ataaatacatatacattcata 280 ||||||||||||||||||||| Sbjct: 22107 ataaatacatatacattcata 22087
>gb|AY113481.1| Drosophila melanogaster RE45066 full insert cDNA Length = 2059 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 661 aaataatttaaaaatcctgat 681 ||||||||||||||||||||| Sbjct: 1809 aaataatttaaaaatcctgat 1789
>ref|NM_137901.1| Drosophila melanogaster CG9896-RA (CG9896), mRNA Length = 2048 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 661 aaataatttaaaaatcctgat 681 ||||||||||||||||||||| Sbjct: 1808 aaataatttaaaaatcctgat 1788
>gb|AC100783.2| Homo sapiens chromosome 18, clone RP11-141I4, complete sequence Length = 149913 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 596 ttcaaaactcaaaaggtacaa 616 ||||||||||||||||||||| Sbjct: 148435 ttcaaaactcaaaaggtacaa 148415
>gb|AC098595.2| Homo sapiens BAC clone RP11-495L18 from 4, complete sequence Length = 160151 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 584 caaaacatacatttcaaaact 604 ||||||||||||||||||||| Sbjct: 147019 caaaacatacatttcaaaact 146999
>gb|AC091977.3| Homo sapiens chromosome 5 clone RP11-528L24, complete sequence Length = 183494 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 256 atacataaatacatatacattcata 280 ||||||| ||||||||||||||||| Sbjct: 96606 atacatatatacatatacattcata 96630
>gb|AC096586.3| Homo sapiens chromosome 4 clone RP11-700J17, complete sequence Length = 175517 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 259 cataaatacatatacattcat 279 ||||||||||||||||||||| Sbjct: 169298 cataaatacatatacattcat 169278
>ref|NM_059730.2| Caenorhabditis elegans RNA-dependent RNA polymerase Family family member (rrf-1) (rrf-1) mRNA, complete cds Length = 5025 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 538 cagacattcaatcaaatatttgata 562 ||||||||||||||||||| ||||| Sbjct: 1138 cagacattcaatcaaatatgtgata 1114
>gb|AC015819.5|AC015819 Homo sapiens chromosome 18, clone RP11-405M12, complete sequence Length = 144542 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 596 ttcaaaactcaaaaggtacaa 616 ||||||||||||||||||||| Sbjct: 126277 ttcaaaactcaaaaggtacaa 126297
>gb|AC008352.2|AC008352 Drosophila melanogaster, chromosome 2R, region 59C-59D, BAC clone BACR08P09, complete sequence Length = 181463 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 661 aaataatttaaaaatcctgat 681 ||||||||||||||||||||| Sbjct: 32190 aaataatttaaaaatcctgat 32210
>gb|AC021015.4| Homo sapiens BAC clone RP11-320C1 from 2, complete sequence Length = 148997 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 256 atacataaatacatatacatt 276 ||||||||||||||||||||| Sbjct: 31458 atacataaatacatatacatt 31478
>gb|AF159144.1|AF159144 Caenorhabditis elegans RRF-1 (rrf-1) mRNA, complete cds Length = 5025 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 538 cagacattcaatcaaatatttgata 562 ||||||||||||||||||| ||||| Sbjct: 1138 cagacattcaatcaaatatgtgata 1114
>gb|AC010723.3|AC010723 Homo sapiens BAC clone RP11-139C10 from Y, complete sequence Length = 174420 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 646 gtatttggcactgagaaataa 666 ||||||||||||||||||||| Sbjct: 170968 gtatttggcactgagaaataa 170948
>gb|AC156160.4| Monodelphis domestica, clone XX-23H4, complete sequence Length = 143400 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 256 atacataaatacatatacatt 276 ||||||||||||||||||||| Sbjct: 116318 atacataaatacatatacatt 116298
>emb|BX088587.6| Zebrafish DNA sequence from clone DKEY-71B9 in linkage group 17, complete sequence Length = 154682 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 255 catacataaatacatatacat 275 ||||||||||||||||||||| Sbjct: 114603 catacataaatacatatacat 114583
>emb|AL844480.29| Mouse DNA sequence from clone RP23-190B10 on chromosome 4, complete sequence Length = 175199 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 256 atacataaatacatatacatt 276 ||||||||||||||||||||| Sbjct: 26820 atacataaatacatatacatt 26840
>gb|AC140346.4| Mus musculus BAC clone RP24-260I8 from 16, complete sequence Length = 185587 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 255 catacataaatacatatacat 275 ||||||||||||||||||||| Sbjct: 179463 catacataaatacatatacat 179483
>gb|AC007177.1|AC007177 Drosophila melanogaster, chromosome 2R, region 59C1-59C5, P1 clones DS06621 and DS02186, complete sequence Length = 101320 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 661 aaataatttaaaaatcctgat 681 ||||||||||||||||||||| Sbjct: 46411 aaataatttaaaaatcctgat 46391
>gb|AE003459.3| Drosophila melanogaster chromosome 2R, section 67 of 73 of the complete sequence Length = 283700 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 661 aaataatttaaaaatcctgat 681 ||||||||||||||||||||| Sbjct: 98003 aaataatttaaaaatcctgat 98023
>emb|BX936400.1| Yersinia pseudotuberculosis IP32953 cryptic plasmid, complete sequence Length = 27702 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 256 atacataaatacatatacatt 276 ||||||||||||||||||||| Sbjct: 1792 atacataaatacatatacatt 1772
>gb|AC175366.1| Pan troglodytes chromosome X clone CH251-499L9 map human ortholog p11.4, complete sequence Length = 217335 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 536 accagacattcaatcaaatatttga 560 |||| |||||||||||||||||||| Sbjct: 149493 accacacattcaatcaaatatttga 149469
>gb|AC159324.2| Mus musculus BAC clone RP23-9D1 from chromosome 12, complete sequence Length = 207280 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 666 atttaaaaatcctgatgagca 686 ||||||||||||||||||||| Sbjct: 141517 atttaaaaatcctgatgagca 141497
>dbj|AP001002.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-678K21, complete sequences Length = 164380 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 255 catacataaatacatatacattcat 279 |||| |||||||||||||||||||| Sbjct: 62261 catatataaatacatatacattcat 62285
>gb|AC135673.5| Mus musculus BAC clone RP24-279A17 from 16, complete sequence Length = 173965 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 255 catacataaatacatatacat 275 ||||||||||||||||||||| Sbjct: 62884 catacataaatacatatacat 62904
>gb|AC120789.12| Mus musculus chromosome 8, clone RP23-441F24, complete sequence Length = 204013 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 255 catacataaatacatatacattcat 279 |||||||| |||||||||||||||| Sbjct: 111973 catacatatatacatatacattcat 111997
>emb|AL606985.26| Mouse DNA sequence from clone RP23-153M14 on chromosome 4, complete sequence Length = 193947 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 255 catacataaatacatatacat 275 ||||||||||||||||||||| Sbjct: 173192 catacataaatacatatacat 173172
>gb|AC121834.4| Mus musculus BAC clone RP24-72F20 from chromosome 5, complete sequence Length = 226382 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 255 catacataaatacatatacat 275 ||||||||||||||||||||| Sbjct: 129434 catacataaatacatatacat 129454
>emb|AL929065.4| Mouse DNA sequence from clone RP23-270H4 on chromosome 2, complete sequence Length = 173846 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 256 atacataaatacatatacatt 276 ||||||||||||||||||||| Sbjct: 6932 atacataaatacatatacatt 6952
>gb|AC153069.1| Homo sapiens chromosome X clone LL0XNC01-K0541 map q28, complete sequence Length = 35323 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 219 ttcctccactattctcatgt 238 |||||||||||||||||||| Sbjct: 20138 ttcctccactattctcatgt 20157
>gb|AC101924.24| Mus musculus chromosome 1, clone RP24-391B5, complete sequence Length = 161617 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 257 tacataaatacatatacattcata 280 ||||||||||||||||||| |||| Sbjct: 106989 tacataaatacatatacatacata 107012
>gb|AE014834.1| Plasmodium falciparum 3D7 chromosome 10 section 6 of 7 of the complete sequence Length = 253001 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 catacataaatacatataca 274 |||||||||||||||||||| Sbjct: 12995 catacataaatacatataca 12976
>gb|AC152008.1| Homo sapiens chromosome X clone LL0XNC01-G0216 map q28, complete sequence Length = 35784 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 219 ttcctccactattctcatgt 238 |||||||||||||||||||| Sbjct: 32054 ttcctccactattctcatgt 32073
>gb|AC152007.1| Homo sapiens chromosome X clone LL0XNC01-G0137 map q28, complete sequence Length = 41352 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 219 ttcctccactattctcatgt 238 |||||||||||||||||||| Sbjct: 17672 ttcctccactattctcatgt 17691
>gb|AE014852.2| Plasmodium falciparum 3D7 chromosome 12, section 9 of 9 of the complete sequence Length = 260929 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 256 atacataaatacatatacat 275 |||||||||||||||||||| Sbjct: 81435 atacataaatacatatacat 81416
>gb|AC005611.1| Homo sapiens chromosome 5, BAC clone 259m9 (LBNL H193), complete sequence Length = 107190 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 512 gagatgtttcagctctgtaaattc 535 ||||||||||||||||| |||||| Sbjct: 79610 gagatgtttcagctctgaaaattc 79587
>gb|AC116520.14| Mus musculus chromosome 15, clone RP24-340J12, complete sequence Length = 149118 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 catacataaatacatataca 274 |||||||||||||||||||| Sbjct: 102789 catacataaatacatataca 102770
>gb|AC009905.12| Drosophila melanogaster clone BACR21E16, complete sequence Length = 170662 Score = 40.1 bits (20), Expect = 9.4 Identities = 32/36 (88%) Strand = Plus / Plus Query: 567 gaattattaaattatagcaaaacatacatttcaaaa 602 |||| ||||||||||||| || ||||||||||||| Sbjct: 90580 gaataattaaattatagctgaatatacatttcaaaa 90615
>gb|AC150482.2| Bos taurus BAC CH240-308E11 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence Length = 179880 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 257 tacataaatacatatacattcata 280 ||||||||||||||||||| |||| Sbjct: 32008 tacataaatacatatacatgcata 32031
>ref|XM_417820.1| PREDICTED: Gallus gallus similar to Microtubule-actin crosslinking factor 1, isoform 4 (LOC419673), mRNA Length = 4793 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 510 cagagatgtttcagctctgt 529 |||||||||||||||||||| Sbjct: 1132 cagagatgtttcagctctgt 1113
>gb|AC145580.3| Mus musculus BAC clone RP24-380D12 from chromosome 16, complete sequence Length = 130390 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 257 tacataaatacatatacattcata 280 |||||| ||||||||||||||||| Sbjct: 51750 tacatatatacatatacattcata 51727
>ref|XM_457055.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0B02024g) partial mRNA Length = 1230 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 202 agctgcaacacaaagccttc 221 |||||||||||||||||||| Sbjct: 677 agctgcaacacaaagccttc 658
>gb|AC140412.2| Mus musculus BAC clone RP24-173O20 from chromosome 14, complete sequence Length = 152809 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 260 ataaatacatatacattcat 279 |||||||||||||||||||| Sbjct: 19266 ataaatacatatacattcat 19247
>gb|AC125265.8| Mus musculus chromosome 6, clone RP24-444K24, complete sequence Length = 156056 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 264 atacatatacattcataactggat 287 |||||||||||||||||| ||||| Sbjct: 28660 atacatatacattcataagtggat 28683
>gb|AC147090.3| Pan troglodytes BAC clone RP43-58D11 from 7, complete sequence Length = 200913 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 201 aagctgcaacacaaagccttcctc 224 |||||||||||||||| ||||||| Sbjct: 61006 aagctgcaacacaaagtcttcctc 60983
>gb|AY491856.1| Euphydryas aurinia clone EA92 microsatellite sequence Length = 285 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 255 catacataaatacatatacattca 278 |||||||| ||||||||||||||| Sbjct: 74 catacatacatacatatacattca 97
>gb|AC102008.9| Mus musculus chromosome 7, clone RP24-502L8, complete sequence Length = 194538 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 255 catacataaatacatataca 274 |||||||||||||||||||| Sbjct: 144797 catacataaatacatataca 144816
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 421 tacatggtatcatcatcaaa 440 |||||||||||||||||||| Sbjct: 1089545 tacatggtatcatcatcaaa 1089564
>gb|AC163395.6| Mus musculus chromosome 7, clone RP24-251J14, complete sequence Length = 151667 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 255 catacataaatacatataca 274 |||||||||||||||||||| Sbjct: 49870 catacataaatacatataca 49889
>gb|AC110262.12| Mus musculus chromosome 17, clone RP23-291L10, complete sequence Length = 210850 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 catacataaatacatataca 274 |||||||||||||||||||| Sbjct: 80741 catacataaatacatataca 80722
>emb|CR848682.9| Zebrafish DNA sequence from clone CH211-286K10 in linkage group 9, complete sequence Length = 84943 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 catacataaatacatataca 274 |||||||||||||||||||| Sbjct: 52660 catacataaatacatataca 52641
>emb|CR538727.16| Zebrafish DNA sequence from clone DKEY-9G20 in linkage group 9, complete sequence Length = 155321 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 catacataaatacatataca 274 |||||||||||||||||||| Sbjct: 38686 catacataaatacatataca 38667
>gb|AC118603.9| Mus musculus chromosome 16, clone RP24-79L6, complete sequence Length = 190432 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 257 tacataaatacatatacattcata 280 |||||| ||||||||||||||||| Sbjct: 64243 tacatatatacatatacattcata 64266
>gb|AC132259.3| Mus musculus BAC clone RP24-369B15 from chromosome 3, complete sequence Length = 131182 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 544 ttcaatcaaatatttgataa 563 |||||||||||||||||||| Sbjct: 113626 ttcaatcaaatatttgataa 113607
>gb|AC115290.5| Mus musculus BAC clone RP23-65M10 from chromosome 10, complete sequence Length = 245623 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 atacataaatacatatacat 275 |||||||||||||||||||| Sbjct: 199819 atacataaatacatatacat 199838
>gb|AC122344.3| Mus musculus BAC clone RP23-364M19 from chromosome 9, complete sequence Length = 209165 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 254 gcatacataaatacatatacattc 277 ||||||||| |||||||||||||| Sbjct: 17059 gcatacatacatacatatacattc 17082
>emb|Z46791.1|CEC09G5 Caenorhabditis elegans Cosmid C09G5, complete sequence Length = 29688 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 661 aaataatttaaaaatcctga 680 |||||||||||||||||||| Sbjct: 18462 aaataatttaaaaatcctga 18443
>gb|AC124743.5| Mus musculus BAC clone RP23-219C1 from 1, complete sequence Length = 220167 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 257 tacataaatacatatacattcata 280 ||||||||||||||||||| |||| Sbjct: 36667 tacataaatacatatacatacata 36690
>gb|AC112521.4| Mus musculus BAC clone RP23-186C6 from 9, complete sequence Length = 230334 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 255 catacataaatacatatacattca 278 |||||||| ||||||||||||||| Sbjct: 161164 catacatatatacatatacattca 161141
>ref|XM_960918.1| Plasmodium falciparum 3D7 ATP dependent RNA helicase (PFF0100w) partial mRNA Length = 4053 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 566 agaattattaaattatagca 585 |||||||||||||||||||| Sbjct: 2484 agaattattaaattatagca 2503
>gb|AC092444.2| Homo sapiens BAC clone RP11-633A20 from 7, complete sequence Length = 7192 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 201 aagctgcaacacaaagccttcctc 224 |||||||||||||||| ||||||| Sbjct: 6225 aagctgcaacacaaagtcttcctc 6202
>gb|AC105951.9| Mus musculus chromosome 5, clone RP23-475D21, complete sequence Length = 178610 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 256 atacataaatacatatacat 275 |||||||||||||||||||| Sbjct: 10904 atacataaatacatatacat 10885
>gb|AC005008.2| Homo sapiens BAC clone GS1-52G5 from 7, complete sequence Length = 91634 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 201 aagctgcaacacaaagccttcctc 224 |||||||||||||||| ||||||| Sbjct: 1033 aagctgcaacacaaagtcttcctc 1010
>gb|AC142294.1| Pan troglodytes BAC clone RP43-73M4 from 7, complete sequence Length = 173444 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 201 aagctgcaacacaaagccttcctc 224 |||||||||||||||| ||||||| Sbjct: 96943 aagctgcaacacaaagtcttcctc 96920
>gb|AC103574.7| Rattus norvegicus 1 BAC CH230-205C19 (Children's Hospital Oakland Research Institute) complete sequence Length = 199047 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 atacataaatacatatacat 275 |||||||||||||||||||| Sbjct: 12027 atacataaatacatatacat 12046
>emb|Z99496.1|HS509L4 Human DNA sequence from clone RP3-509L4 on chromosome 6q22.1-22.33 Contains part of the gene for serologically defined breast cancer antigen NY-BR-15 (LOC221312), the PLN gene for phospholamban (PLB), a bromodomain-containing 7 (BRD7) pseudogene and a synovial sarcoma X breakpoint gene pseudogene, complete sequence Length = 150290 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 260 ataaatacatatacattcat 279 |||||||||||||||||||| Sbjct: 53784 ataaatacatatacattcat 53765
>emb|AL360006.15| Human DNA sequence from clone RP11-528D17 on chromosome 1, complete sequence Length = 113420 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 atacataaatacatatacat 275 |||||||||||||||||||| Sbjct: 96389 atacataaatacatatacat 96408
>emb|AL359073.25| Human DNA sequence from clone RP11-432F4 on chromosome 9 Contains the 5' end of the gene for regulator of differentiation 1 (ROD1), a ribosomal protein L32 (RPL32) pseudogene and a CpG island.n, complete sequence Length = 64850 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 atacataaatacatatacat 275 |||||||||||||||||||| Sbjct: 33916 atacataaatacatatacat 33935
>gb|AE014829.1| Plasmodium falciparum 3D7 chromosome 10 section 1 of 7 of the complete sequence Length = 250078 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 31 tatatacataaaacatcaaa 50 |||||||||||||||||||| Sbjct: 145093 tatatacataaaacatcaaa 145112
>emb|AL359375.16| Human DNA sequence from clone RP11-93K18 on chromosome 10, complete sequence Length = 126846 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 atacataaatacatatacat 275 |||||||||||||||||||| Sbjct: 19928 atacataaatacatatacat 19947
>emb|AL357037.13| Human DNA sequence from clone RP11-383B24 on chromosome 10 Contains the 3' end of a 44kDA polymerase (RNA) III (DNA directed) polypeptide D (POLR3D) pseudogene, the 3' end of the ADK gene for adenosine kinase and a novel pseudogene, complete sequence Length = 165773 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 atacataaatacatatacat 275 |||||||||||||||||||| Sbjct: 107637 atacataaatacatatacat 107656
>emb|AL159163.40| Human DNA sequence from clone RP11-514O12 on chromosome 6 Contains the 5' end of a variant of the RPS6KA2 gene for ribosomal protein S6 kinase, 90kD, polypeptide 2 (RSK3), a novel gene, the 3' end of the gene for ribonuclease 6 precursor (RNASE6PL)(FLJ10907) and 2 CpG islands, complete sequence Length = 156938 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 206 gcaacacaaagccttcctcc 225 |||||||||||||||||||| Sbjct: 17617 gcaacacaaagccttcctcc 17598
>gb|AC117633.6| Mus musculus, clone RP23-200C8, complete sequence Length = 224221 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 657 tgagaaataatttaaaaatc 676 |||||||||||||||||||| Sbjct: 105548 tgagaaataatttaaaaatc 105529
>gb|AC087880.24| Homo sapiens 12q BAC RP11-121J20 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 188361 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 252 aggcatacataaatacatatacat 275 ||||||||||| |||||||||||| Sbjct: 116992 aggcatacatagatacatatacat 116969
>gb|AC121350.2| Rattus norvegicus chromosome 1 clone RP32-101I22 map q31-q35, complete sequence Length = 115948 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 637 acattacaagtatttggcac 656 |||||||||||||||||||| Sbjct: 84431 acattacaagtatttggcac 84412
>emb|AL031119.1|HS28C20 Human DNA sequence from clone RP1-28C20 on chromosome 6q24 Contains the 3' end of a variant of the EPM2A gene for progressive myoclonus type 2 epilepsy (Lafora disease) protein (laforin) and a BTB/POZ domain zinc finger protein pseudogene, complete sequence Length = 115835 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 256 atacataaatacatatacat 275 |||||||||||||||||||| Sbjct: 78063 atacataaatacatatacat 78044
>emb|Z98551.1|PFMAL3P6 Plasmodium falciparum MAL3P6, complete sequence Length = 164399 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 atacataaatacatatacat 275 |||||||||||||||||||| Sbjct: 163367 atacataaatacatatacat 163386
>emb|Z30660.1|PFDIPSY11 P.falciparum (V1/S) gene for dihydropteroate synthetase Length = 1269 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 256 atacataaatacatatacat 275 |||||||||||||||||||| Sbjct: 1109 atacataaatacatatacat 1090
>emb|Z30659.1|PFDIPSY10 P.falciparum (FCR3) gene for dihydropteroate synthetase Length = 1269 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 256 atacataaatacatatacat 275 |||||||||||||||||||| Sbjct: 1109 atacataaatacatatacat 1090
>emb|Z31584.1|PFHDPKDS P.falciparum gene for hydroxymethyl-dihydropterin pyrophosphokinase and dihydropteroate synthetase Length = 2647 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 256 atacataaatacatatacat 275 |||||||||||||||||||| Sbjct: 2435 atacataaatacatatacat 2416
>emb|Z30665.1|PFDIPSY5 P.falciparum (It.G2.F6) gene for dihydropteroate synthetase Length = 1269 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 256 atacataaatacatatacat 275 |||||||||||||||||||| Sbjct: 1109 atacataaatacatatacat 1090
>emb|Z30664.1|PFDIPSY3 P.falciparum (SL/D6) gene for dihydropteroate synthetase Length = 1269 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 256 atacataaatacatatacat 275 |||||||||||||||||||| Sbjct: 1109 atacataaatacatatacat 1090
>emb|Z30658.1|PFDIPSY9 P.falciparum (Tak9/96) gene for dihydropteroate syntethase Length = 1269 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 256 atacataaatacatatacat 275 |||||||||||||||||||| Sbjct: 1109 atacataaatacatatacat 1090
>emb|Z30657.1|PFDIPSY8 P.falciparum (It.D12) gene for dihydropteroate synthetase Length = 1269 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 256 atacataaatacatatacat 275 |||||||||||||||||||| Sbjct: 1109 atacataaatacatatacat 1090
>emb|Z30656.1|PFDIPSY7 P.falciparum (K39) gene for dihydropteroate synthetase Length = 1269 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 256 atacataaatacatatacat 275 |||||||||||||||||||| Sbjct: 1109 atacataaatacatatacat 1090
>emb|Z30655.1|PFDIPSY6 P.falciparum (M24) gene for dihydropteroate synthetase Length = 1269 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 256 atacataaatacatatacat 275 |||||||||||||||||||| Sbjct: 1109 atacataaatacatatacat 1090
>emb|Z30654.1|PFDIPSY4 P.falciparum (3D7) gene for dihydropteroate synthetase Length = 1269 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 256 atacataaatacatatacat 275 |||||||||||||||||||| Sbjct: 1109 atacataaatacatatacat 1090
>emb|Z30653.1|PFDIPSY2 P.falciparum (W282) gene for dihydropteroate synthetase Length = 1269 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 256 atacataaatacatatacat 275 |||||||||||||||||||| Sbjct: 1109 atacataaatacatatacat 1090
>emb|CR382398.1| Plasmodium falciparum chromosome 6, complete sequence; segment 1/5 Length = 349418 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 566 agaattattaaattatagca 585 |||||||||||||||||||| Sbjct: 94986 agaattattaaattatagca 95005
>emb|CR382134.1| Debaryomyces hansenii chromosome B of strain CBS767 of Debaryomyces hansenii Length = 1349926 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 202 agctgcaacacaaagccttc 221 |||||||||||||||||||| Sbjct: 152700 agctgcaacacaaagccttc 152681
>gb|BC099838.1| Mus musculus cDNA clone MGC:106592 IMAGE:5703010, complete cds Length = 4849 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 catacataaatacatataca 274 |||||||||||||||||||| Sbjct: 4210 catacataaatacatataca 4191
>emb|AL713870.26| Mouse DNA sequence from clone RP24-239D8 on chromosome 11 Contains the 5' end of the Slc36a3 gene for solute carrier family 36 (proton/amino acid symporter) member 3, two novel genes, the Tramd1 gene for tramdorin 1 (transmembrane domain rich protein), the Slc36a1 gene for solute carrier family 36 (proton/amino acid symporter) member 1 and the gene for the ortholog of human and rat FAT tumor suppressor homolog 2 (Drosophila) FAT2, complete sequence Length = 188782 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 261 taaatacatatacattcata 280 |||||||||||||||||||| Sbjct: 143223 taaatacatatacattcata 143242
>emb|AL162508.1|ATT7H20 Arabidopsis thaliana DNA chromosome 5, BAC clone T7H20 (ESSA project) Length = 87581 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 624 atatttcaaacttacattac 643 |||||||||||||||||||| Sbjct: 33505 atatttcaaacttacattac 33486
>gb|AC159505.7| Mus musculus 6 BAC RP23-81D20 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 254457 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 264 atacatatacattcataactggat 287 |||||||||||||||||| ||||| Sbjct: 138651 atacatatacattcataagtggat 138628
>emb|AL662909.9| Mouse DNA sequence from clone RP23-189I13 on chromosome 11 Contains the 5' end of the Odz2 gene for odd Oz/ten-m homolog 2 (Drosophila) and a CpG island, complete sequence Length = 201564 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 tacataaatacatatacatt 276 |||||||||||||||||||| Sbjct: 61996 tacataaatacatatacatt 62015
>gb|AC112646.9| Homo sapiens 3 BAC RP11-687B8 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 38601 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 atacataaatacatatacat 275 |||||||||||||||||||| Sbjct: 30829 atacataaatacatatacat 30848
>emb|AL512585.12| Mouse DNA sequence from clone RP23-236A12 on chromosome 4, complete sequence Length = 217400 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 255 catacataaatacatataca 274 |||||||||||||||||||| Sbjct: 133103 catacataaatacatataca 133122
>gb|AC010424.9| Homo sapiens chromosome 5 clone CTD-2195M15, complete sequence Length = 192282 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 512 gagatgtttcagctctgtaaattc 535 ||||||||||||||||| |||||| Sbjct: 139977 gagatgtttcagctctgaaaattc 139954
>gb|AC023710.5| Drosophila melanogaster X BAC RP98-19D3 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 189976 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 ggcatacataaatacatata 272 |||||||||||||||||||| Sbjct: 108249 ggcatacataaatacatata 108230
>gb|AC022542.5| Homo sapiens chromosome 10 clone RP11-537G20, complete sequence Length = 185857 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 251 aaggcatacataaatacata 270 |||||||||||||||||||| Sbjct: 21789 aaggcatacataaatacata 21808
>ref|NM_132087.3| Drosophila melanogaster CG15893-RA (CG15893), mRNA Length = 1929 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 ggcatacataaatacatata 272 |||||||||||||||||||| Sbjct: 1608 ggcatacataaatacatata 1589
>gb|AC108077.3| Homo sapiens BAC clone RP11-739G21 from 4, complete sequence Length = 106983 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 588 acatacatttcaaaactcaa 607 |||||||||||||||||||| Sbjct: 55715 acatacatttcaaaactcaa 55734
>gb|AC099499.2| Homo sapiens chromosome 5 clone RP11-192H6, complete sequence Length = 145787 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 256 atacataaatacatatacat 275 |||||||||||||||||||| Sbjct: 126171 atacataaatacatatacat 126152
>gb|AC015967.8| Homo sapiens chromosome 18, clone RP11-294N21, complete sequence Length = 186726 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 atacataaatacatatacat 275 |||||||||||||||||||| Sbjct: 89573 atacataaatacatatacat 89592
>gb|AY070559.1| Drosophila melanogaster LD32923 full length cDNA Length = 1911 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 ggcatacataaatacatata 272 |||||||||||||||||||| Sbjct: 1589 ggcatacataaatacatata 1570
>ref|XM_943452.1| PREDICTED: Homo sapiens zinc finger protein 275, transcript variant 8 (ZNF275), mRNA Length = 6243 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 219 ttcctccactattctcatgt 238 |||||||||||||||||||| Sbjct: 272 ttcctccactattctcatgt 291
>ref|XM_943451.1| PREDICTED: Homo sapiens zinc finger protein 275, transcript variant 7 (ZNF275), mRNA Length = 5746 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 219 ttcctccactattctcatgt 238 |||||||||||||||||||| Sbjct: 272 ttcctccactattctcatgt 291
>ref|XM_937833.1| PREDICTED: Homo sapiens zinc finger protein 275, transcript variant 6 (ZNF275), mRNA Length = 6539 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 219 ttcctccactattctcatgt 238 |||||||||||||||||||| Sbjct: 272 ttcctccactattctcatgt 291
>ref|XM_931925.1| PREDICTED: Homo sapiens zinc finger protein 275, transcript variant 4 (ZNF275), mRNA Length = 6243 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 219 ttcctccactattctcatgt 238 |||||||||||||||||||| Sbjct: 272 ttcctccactattctcatgt 291
>ref|XM_931920.1| PREDICTED: Homo sapiens zinc finger protein 275, transcript variant 3 (ZNF275), mRNA Length = 5746 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 219 ttcctccactattctcatgt 238 |||||||||||||||||||| Sbjct: 272 ttcctccactattctcatgt 291
>ref|XM_927180.1| PREDICTED: Homo sapiens zinc finger protein 275, transcript variant 2 (ZNF275), mRNA Length = 6539 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 219 ttcctccactattctcatgt 238 |||||||||||||||||||| Sbjct: 272 ttcctccactattctcatgt 291
>gb|AC068513.8| Homo sapiens chromosome 18, clone RP11-659L20, complete sequence Length = 153873 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 atacataaatacatatacat 275 |||||||||||||||||||| Sbjct: 105162 atacataaatacatatacat 105181
>gb|AC008876.6| Homo sapiens chromosome 5 clone CTD-2201P10, complete sequence Length = 152707 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 589 catacatttcaaaactcaaa 608 |||||||||||||||||||| Sbjct: 96909 catacatttcaaaactcaaa 96890
>gb|AC008568.7| Homo sapiens chromosome 5 clone CTC-546K23, complete sequence Length = 152706 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 589 catacatttcaaaactcaaa 608 |||||||||||||||||||| Sbjct: 55798 catacatttcaaaactcaaa 55817
>gb|AC090513.3| Homo sapiens chromosome 15 clone RP11-213B23 map 15q15, complete sequence Length = 161867 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 586 aaacatacatttcaaaactcaaaa 609 |||||||||||||||||| ||||| Sbjct: 131913 aaacatacatttcaaaacacaaaa 131936
>dbj|AK036241.1| Mus musculus 16 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:9630047N16 product:hypothetical protein, full insert sequence Length = 4778 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 catacataaatacatataca 274 |||||||||||||||||||| Sbjct: 4185 catacataaatacatataca 4166
>gb|AC006345.4|AC006345 Homo sapiens PAC clone RP4-791N16 from 14q24.3, complete sequence Length = 125508 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 258 acataaatacatatacattcataa 281 |||||||||||||||||| ||||| Sbjct: 13828 acataaatacatatacatacataa 13851
>emb|BX470178.13| Zebrafish DNA sequence from clone CH211-285K18, complete sequence Length = 166954 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 atacataaatacatatacat 275 |||||||||||||||||||| Sbjct: 130356 atacataaatacatatacat 130375
>gb|AC034105.7| Homo sapiens chromosome 16 clone RP11-170L3, complete sequence Length = 156484 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 585 aaaacatacatttcaaaactcaaa 608 ||||||||||| |||||||||||| Sbjct: 17357 aaaacatacatatcaaaactcaaa 17380
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 421 tacatggtatcatcatcaaa 440 |||||||||||||||||||| Sbjct: 1089543 tacatggtatcatcatcaaa 1089562
>gb|AF327241.1|F327224S18 Homo sapiens voltage-gated sodium channel type II alpha subunit (SCN2A) gene, exon 20 Length = 599 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 261 taaatacatatacattcata 280 |||||||||||||||||||| Sbjct: 519 taaatacatatacattcata 538
>gb|AC011303.9| Homo sapiens BAC clone RP11-342D6 from 2, complete sequence Length = 188616 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 261 taaatacatatacattcata 280 |||||||||||||||||||| Sbjct: 99032 taaatacatatacattcata 99051
>gb|AC087564.6| Homo sapiens chromosome 16 clone RP11-437L7, complete sequence Length = 157233 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 618 ttgcctatatttcaaacttacatt 641 |||| ||||||||||||||||||| Sbjct: 73341 ttgcatatatttcaaacttacatt 73364
>gb|AC118980.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1263H11, complete sequence Length = 126827 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 421 tacatggtatcatcatcaaa 440 |||||||||||||||||||| Sbjct: 109760 tacatggtatcatcatcaaa 109779
>emb|BX284612.22| Mouse DNA sequence from clone RP23-332H17 on chromosome 2, complete sequence Length = 132718 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 atacataaatacatatacat 275 |||||||||||||||||||| Sbjct: 111274 atacataaatacatatacat 111293
>emb|BX571671.3| Zebrafish DNA sequence from clone DKEY-153O22 in linkage group 20, complete sequence Length = 86323 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 255 catacataaatacatatacattca 278 |||||||| ||||||||||||||| Sbjct: 72008 catacatacatacatatacattca 72031
>emb|AL929228.5| Mouse DNA sequence from clone RP23-359E23 on chromosome 2, complete sequence Length = 212717 Score = 40.1 bits (20), Expect = 9.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 254 gcatacataaatacatatacattcataa 281 |||||| ||||||||||||||| ||||| Sbjct: 171873 gcatacctaaatacatatacatacataa 171900
>emb|AL442663.3|CNS07ECV Human chromosome 14 DNA sequence BAC R-109N23 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 165423 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 258 acataaatacatatacattcataa 281 |||||||||||||||||| ||||| Sbjct: 51242 acataaatacatatacatacataa 51265
>emb|AL391833.10| Human DNA sequence from clone RP11-307K1 on chromosome 6, complete sequence Length = 201512 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 255 catacataaatacatataca 274 |||||||||||||||||||| Sbjct: 100394 catacataaatacatataca 100413
>gb|AF019664.1|AF019664 Homo sapiens cosmids 52b3, 189g5, ICRFc109N244QD2, P1 255h6, and PAC pDJ84g15 from chromosome 6q27 encompassing markers D6S193 and D6S297, complete sequence Length = 68940 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 206 gcaacacaaagccttcctcc 225 |||||||||||||||||||| Sbjct: 34974 gcaacacaaagccttcctcc 34955
>emb|BX322618.8| Zebrafish DNA sequence from clone CH211-265G21 in linkage group 20, complete sequence Length = 144211 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 255 catacataaatacatatacattca 278 |||||||| ||||||||||||||| Sbjct: 16458 catacatacatacatatacattca 16435
>gb|AC101962.7| Mus musculus chromosome 3, clone RP24-222A19, complete sequence Length = 198284 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 544 ttcaatcaaatatttgataa 563 |||||||||||||||||||| Sbjct: 175341 ttcaatcaaatatttgataa 175360
>gb|AE003654.3| Drosophila melanogaster chromosome 2L, section 63 of 83 of the complete sequence Length = 258558 Score = 40.1 bits (20), Expect = 9.4 Identities = 32/36 (88%) Strand = Plus / Plus Query: 567 gaattattaaattatagcaaaacatacatttcaaaa 602 |||| ||||||||||||| || ||||||||||||| Sbjct: 239608 gaataattaaattatagctgaatatacatttcaaaa 239643
>gb|AE003437.3| Drosophila melanogaster chromosome X, section 21 of 74 of the complete sequence Length = 305376 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 ggcatacataaatacatata 272 |||||||||||||||||||| Sbjct: 98108 ggcatacataaatacatata 98089
>dbj|AP001001.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-677I18, complete sequence Length = 182429 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 207 caacacaaagccttcctcca 226 |||||||||||||||||||| Sbjct: 93368 caacacaaagccttcctcca 93349
>gb|AC110216.10| Mus musculus chromosome 18, clone RP24-502I6, complete sequence Length = 201138 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 657 tgagaaataatttaaaaatc 676 |||||||||||||||||||| Sbjct: 14584 tgagaaataatttaaaaatc 14565
>dbj|AP000813.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-822P4, complete sequence Length = 210816 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 207 caacacaaagccttcctcca 226 |||||||||||||||||||| Sbjct: 191114 caacacaaagccttcctcca 191095
>gb|AC084416.36| Mus musculus strain C57BL/6J chromosome 5 clone rp23-430i3, complete sequence Length = 183540 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 256 atacataaatacatatacat 275 |||||||||||||||||||| Sbjct: 84561 atacataaatacatatacat 84542
>emb|AL845485.16| Mouse DNA sequence from clone RP23-237D23 on chromosome 2, complete sequence Length = 230213 Score = 40.1 bits (20), Expect = 9.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 590 atacatttcaaaactcaaaaggtacaac 617 ||||||||||| |||| ||||||||||| Sbjct: 1034 atacatttcaacactctaaaggtacaac 1061
>emb|AL845437.14| Zebrafish DNA sequence from clone DKEY-98J1 in linkage group 23, complete sequence Length = 239084 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 atacataaatacatatacat 275 |||||||||||||||||||| Sbjct: 222525 atacataaatacatatacat 222544
>gb|AC147972.3| Gallus gallus BAC clone CH261-78M4 from chromosome unknown, complete sequence Length = 197959 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 661 aaataatttaaaaatcctga 680 |||||||||||||||||||| Sbjct: 185628 aaataatttaaaaatcctga 185609
>gb|AC111011.6| Mus musculus BAC clone RP23-424D18 from 1, complete sequence Length = 201846 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 catacataaatacatataca 274 |||||||||||||||||||| Sbjct: 30812 catacataaatacatataca 30793
>gb|AC147096.3| Mus musculus BAC clone RP23-448H3 from 14, complete sequence Length = 198614 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 260 ataaatacatatacattcat 279 |||||||||||||||||||| Sbjct: 137043 ataaatacatatacattcat 137024
>emb|AL928981.7| Mouse DNA sequence from clone RP23-54O14 on chromosome 2, complete sequence Length = 110096 Score = 40.1 bits (20), Expect = 9.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 253 ggcatacataaatacatatacattcata 280 |||||| || |||||||||||||||||| Sbjct: 3327 ggcatatatgaatacatatacattcata 3354
>ref|NM_178646.2| Mus musculus tigger transposable element derived 5 (Tigd5), mRNA Length = 4778 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 catacataaatacatataca 274 |||||||||||||||||||| Sbjct: 4185 catacataaatacatataca 4166
>dbj|AB208888.1| Homo sapiens mRNA for Sodium channel protein type II alpha subunit variant protein Length = 11847 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 261 taaatacatatacattcata 280 |||||||||||||||||||| Sbjct: 4158 taaatacatatacattcata 4177
>emb|AL928962.9| Mouse DNA sequence from clone RP23-455A4 on chromosome 2, complete sequence Length = 172286 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 atacataaatacatatacat 275 |||||||||||||||||||| Sbjct: 114972 atacataaatacatatacat 114991
>gb|U07706.1|PFU07706 Plasmodium falciparum NF7 dihydropteroate synthetase gene, complete cds Length = 3077 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 256 atacataaatacatatacat 275 |||||||||||||||||||| Sbjct: 2893 atacataaatacatatacat 2874
>dbj|AP000888.3| Homo sapiens genomic DNA, chromosome 6q25.2, clone:KB1880F11 Length = 166355 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 255 catacataaatacatataca 274 |||||||||||||||||||| Sbjct: 22534 catacataaatacatataca 22553
>dbj|AP001576.3| Homo sapiens genomic DNA, chromosome 6q25.2, clone:KB1F5 Length = 105199 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 catacataaatacatataca 274 |||||||||||||||||||| Sbjct: 1875 catacataaatacatataca 1856
>emb|AL731648.6| Mouse DNA sequence from clone RP23-35I10 on chromosome X, complete sequence Length = 119995 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 590 atacatttcaaaactcaaaa 609 |||||||||||||||||||| Sbjct: 23053 atacatttcaaaactcaaaa 23034 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7,970,364 Number of Sequences: 3902068 Number of extensions: 7970364 Number of successful extensions: 187910 Number of sequences better than 10.0: 197 Number of HSP's better than 10.0 without gapping: 197 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 187003 Number of HSP's gapped (non-prelim): 906 length of query: 690 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 667 effective length of database: 17,143,297,704 effective search space: 11434579568568 effective search space used: 11434579568568 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
