ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd15p13
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK072561.1| Oryza sativa (japonica cultivar-group) cDNA clon... 460 e-126
2gb|AC147812.2| Oryza sativa (japonica cultivar-group) chromosome... 226 8e-56
3dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 226 8e-56
4gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 226 8e-56
5gb|AY107998.1| Zea mays PCO144209 mRNA sequence 135 2e-28
6gb|AC106803.3| Homo sapiens chromosome 5 clone RP11-478A7, compl... 48 0.042
7gb|AC073278.9| Homo sapiens BAC clone RP11-661L8 from 7, complet... 46 0.17
8emb|AL159972.8| Human DNA sequence from clone RP11-157H4 on chro... 46 0.17
9gb|AC151408.1| Pan troglodytes chromosome X clone PTB-007P20 map... 44 0.65
10gb|AC006374.2| Homo sapiens BAC clone RP11-357D2 from 7, complet... 44 0.65
11gb|AC164957.2| Mus musculus BAC clone RP23-480L9 from chromosome... 44 0.65
12emb|AL031117.1|HS914P14 Human DNA sequence from clone RP5-914P14... 44 0.65
13ref|NM_129831.2| Arabidopsis thaliana unknown protein AT2G42700 ... 42 2.6
14gb|AC166826.4| Mus musculus BAC clone RP23-370K22 from chromosom... 42 2.6
15gb|AC126670.4| Mus musculus BAC clone RP24-469G14 from chromosom... 42 2.6
16gb|AC125146.3| Mus musculus BAC clone RP24-348B1 from chromosome... 42 2.6
17gb|AC122838.3| Mus musculus BAC clone RP23-191E1 from 3, complet... 42 2.6
18gb|AC121241.32| Medicago truncatula clone mth2-4n3, complete seq... 42 2.6
19gb|AC146749.23| Medicago truncatula clone mth2-145a1, complete s... 42 2.6
20emb|Z97353.3|HS90L6 Human DNA sequence from clone RP1-90L6 on ch... 42 2.6
21emb|AL606467.5| Human DNA sequence from clone RP13-172P16 on chr... 42 2.6
22gb|L05770.5|ACCPCAOP Acinetobacter sp. ADP1 dca-pca-qui-pob-hca ... 42 2.6
23emb|CR543861.1| Acinetobacter sp. ADP1 complete genome 42 2.6
24gb|AC157607.4| Mus musculus chromosome 1, clone RP23-401G11, com... 42 2.6
25gb|AC010243.7| Homo sapiens chromosome 5 clone CTC-361G14, compl... 42 2.6
26gb|AC103808.2| Homo sapiens chromosome 18, clone RP11-94B19, com... 42 2.6
27gb|AC087373.4| Homo sapiens chromosome 11, clone RP11-54J7, comp... 42 2.6
28gb|AC027627.6| Homo sapiens BAC clone RP11-376O6 from 4, complet... 42 2.6
29gb|AC004155.1|AC004155 Mus musculus DNA from BAC 10818 containin... 42 2.6
30gb|AC093721.3| Homo sapiens BAC clone CTD-2010B10 from 4, comple... 42 2.6
31emb|CT485603.4| RP43-005L22, complete sequence 42 2.6
32gb|AC159248.4| Mus musculus BAC clone RP24-254P11 from chromosom... 42 2.6
33gb|AC140380.3| Mus musculus BAC clone RP23-175B15 from 3, comple... 42 2.6
34emb|AL929065.4| Mouse DNA sequence from clone RP23-270H4 on chro... 42 2.6 
>dbj|AK072561.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023133P17, full
            insert sequence
          Length = 3521

 Score =  460 bits (232), Expect = e-126
 Identities = 412/472 (87%)
 Strand = Plus / Minus

                                                                        
Query: 272  ctaagtaaagctggatgagcctaacattaactcaaacatgtcatctggggtgagaagggt 331
            |||| |||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||
Sbjct: 2804 ctaactaaagctggatgagcccaacatcaactcaaacatgtcatctggggtaagaagggt 2745

                                                                        
Query: 332  tgtaccaccaagaatgagctgcacatcaggtctgccgctctctgagattgccttcatgac 391
            ||| || |||||||| |||| |||||||||||||| ||| ||||| ||||||||||||||
Sbjct: 2744 tgttcccccaagaataagctccacatcaggtctgctgctgtctgatattgccttcatgac 2685

                                                                        
Query: 392  ttcccggacctcaagagtattgatgcctcccacaacaaaaacaatgagaaaactttgatc 451
            ||||||||||||||| | |||||||||||||||||||||||| |||||||  ||||| ||
Sbjct: 2684 ttcccggacctcaagggcattgatgcctcccacaacaaaaacgatgagaatgctttggtc 2625

                                                                        
Query: 452  gccaaaatttggtttggactgtccaaggccaaacctacccaatccgcttttaaataagcg 511
            ||||||  ||||||| |||||||| || |||||||| |||| ||| ||||||||||| ||
Sbjct: 2624 gccaaagcttggtttagactgtcctagcccaaacctccccagtccacttttaaataaacg 2565

                                                                        
Query: 512  accaacagctgatgaatgatactcaaggccaggtatgtcaaatctcgtcaacacagctaa 571
             |||||||||||||| ||||| ||||||||||| |||||| | || | ||| ||||||||
Sbjct: 2564 tccaacagctgatgagtgatattcaaggccaggaatgtcataccttgccaagacagctaa 2505

                                                                        
Query: 572  tatcaacttataaagcaagccttttcttgagtagctatcagtctcaaaccgactcagtgc 631
            || ||||||||| ||||||||||||||||||||  | ||||||||||| |  ||||||||
Sbjct: 2504 tagcaacttatagagcaagccttttcttgagtatatgtcagtctcaaatctgctcagtgc 2445

                                                                        
Query: 632  tgccaacccttctccaagagcttgattccttaatctcatactggacaagctatggaagaa 691
            ||| |  ||||||||||||| ||| |||||||| ||||||||||||||  | || |||||
Sbjct: 2444 tgctaggccttctccaagagtttggttccttaacctcatactggacaaattgtgaaagaa 2385

                                                                
Query: 692  cttaaagagttgatctaccctatcacgtacttccaacttaagttgcatgtcc 743
            |||||| || || || || || || |||||||||||||||||||||||||||
Sbjct: 2384 cttaaaaagctggtcaactctgtctcgtacttccaacttaagttgcatgtcc 2333
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>gb|AC147812.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0073K23 map near R10571S, complete sequence
          Length = 161073

 Score =  226 bits (114), Expect = 8e-56
 Identities = 234/274 (85%)
 Strand = Plus / Plus

                                                                         
Query: 470   ctgtccaaggccaaacctacccaatccgcttttaaataagcgaccaacagctgatgaatg 529
             |||||| || |||||||| |||| ||| ||||||||||| || |||||||||||||| ||
Sbjct: 96871 ctgtcctagcccaaacctccccagtccacttttaaataaacgtccaacagctgatgagtg 96930

                                                                         
Query: 530   atactcaaggccaggtatgtcaaatctcgtcaacacagctaatatcaacttataaagcaa 589
             ||| ||||||||||| |||||| | || | ||| |||||||||| ||||||||| |||||
Sbjct: 96931 atattcaaggccaggaatgtcataccttgccaagacagctaatagcaacttatagagcaa 96990

                                                                         
Query: 590   gccttttcttgagtagctatcagtctcaaaccgactcagtgctgccaacccttctccaag 649
             |||||||||||||||  | ||||||||||| |  ||||||||||| |  |||||||||||
Sbjct: 96991 gccttttcttgagtatatgtcagtctcaaatctgctcagtgctgctaggccttctccaag 97050

                                                                         
Query: 650   agcttgattccttaatctcatactggacaagctatggaagaacttaaagagttgatctac 709
             || ||| |||||||| ||||||||||||||  | || ||||||||||| || || || ||
Sbjct: 97051 agtttggttccttaacctcatactggacaaattgtgaaagaacttaaaaagctggtcaac 97110

                                               
Query: 710   cctatcacgtacttccaacttaagttgcatgtcc 743
              || || |||||||||||||||||||||||||||
Sbjct: 97111 tctgtctcgtacttccaacttaagttgcatgtcc 97144



 Score =  172 bits (87), Expect = 1e-39
 Identities = 120/131 (91%)
 Strand = Plus / Plus

                                                                         
Query: 272   ctaagtaaagctggatgagcctaacattaactcaaacatgtcatctggggtgagaagggt 331
             |||| |||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||
Sbjct: 95649 ctaactaaagctggatgagcccaacatcaactcaaacatgtcatctggggtaagaagggt 95708

                                                                         
Query: 332   tgtaccaccaagaatgagctgcacatcaggtctgccgctctctgagattgccttcatgac 391
             ||| || |||||||| |||| |||||||||||||| ||| ||||| ||||||||||||||
Sbjct: 95709 tgttcccccaagaataagctccacatcaggtctgctgctgtctgatattgccttcatgac 95768

                        
Query: 392   ttcccggacct 402
             |||||||||||
Sbjct: 95769 ttcccggacct 95779



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 65/74 (87%)
 Strand = Plus / Plus

                                                                         
Query: 399   acctcaagagtattgatgcctcccacaacaaaaacaatgagaaaactttgatcgccaaaa 458
             |||||||| | |||||||||||||||||||||||| |||||||  ||||| |||||||| 
Sbjct: 96719 acctcaagggcattgatgcctcccacaacaaaaacgatgagaatgctttggtcgccaaag 96778

                           
Query: 459   tttggtttggactg 472
              ||||||| |||||
Sbjct: 96779 cttggtttagactg 96792
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score =  226 bits (114), Expect = 8e-56
 Identities = 234/274 (85%)
 Strand = Plus / Minus

                                                                           
Query: 470     ctgtccaaggccaaacctacccaatccgcttttaaataagcgaccaacagctgatgaatg 529
               |||||| || |||||||| |||| ||| ||||||||||| || |||||||||||||| ||
Sbjct: 3317423 ctgtcctagcccaaacctccccagtccacttttaaataaacgtccaacagctgatgagtg 3317364

                                                                           
Query: 530     atactcaaggccaggtatgtcaaatctcgtcaacacagctaatatcaacttataaagcaa 589
               ||| ||||||||||| |||||| | || | ||| |||||||||| ||||||||| |||||
Sbjct: 3317363 atattcaaggccaggaatgtcataccttgccaagacagctaatagcaacttatagagcaa 3317304

                                                                           
Query: 590     gccttttcttgagtagctatcagtctcaaaccgactcagtgctgccaacccttctccaag 649
               |||||||||||||||  | ||||||||||| |  ||||||||||| |  |||||||||||
Sbjct: 3317303 gccttttcttgagtatatgtcagtctcaaatctgctcagtgctgctaggccttctccaag 3317244

                                                                           
Query: 650     agcttgattccttaatctcatactggacaagctatggaagaacttaaagagttgatctac 709
               || ||| |||||||| ||||||||||||||  | || ||||||||||| || || || ||
Sbjct: 3317243 agtttggttccttaacctcatactggacaaattgtgaaagaacttaaaaagctggtcaac 3317184

                                                 
Query: 710     cctatcacgtacttccaacttaagttgcatgtcc 743
                || || |||||||||||||||||||||||||||
Sbjct: 3317183 tctgtctcgtacttccaacttaagttgcatgtcc 3317150



 Score =  172 bits (87), Expect = 1e-39
 Identities = 120/131 (91%)
 Strand = Plus / Minus

                                                                           
Query: 272     ctaagtaaagctggatgagcctaacattaactcaaacatgtcatctggggtgagaagggt 331
               |||| |||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||
Sbjct: 3318645 ctaactaaagctggatgagcccaacatcaactcaaacatgtcatctggggtaagaagggt 3318586

                                                                           
Query: 332     tgtaccaccaagaatgagctgcacatcaggtctgccgctctctgagattgccttcatgac 391
               ||| || |||||||| |||| |||||||||||||| ||| ||||| ||||||||||||||
Sbjct: 3318585 tgttcccccaagaataagctccacatcaggtctgctgctgtctgatattgccttcatgac 3318526

                          
Query: 392     ttcccggacct 402
               |||||||||||
Sbjct: 3318525 ttcccggacct 3318515



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 65/74 (87%)
 Strand = Plus / Minus

                                                                           
Query: 399     acctcaagagtattgatgcctcccacaacaaaaacaatgagaaaactttgatcgccaaaa 458
               |||||||| | |||||||||||||||||||||||| |||||||  ||||| |||||||| 
Sbjct: 3317575 acctcaagggcattgatgcctcccacaacaaaaacgatgagaatgctttggtcgccaaag 3317516

                             
Query: 459     tttggtttggactg 472
                ||||||| |||||
Sbjct: 3317515 cttggtttagactg 3317502
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  226 bits (114), Expect = 8e-56
 Identities = 234/274 (85%)
 Strand = Plus / Minus

                                                                           
Query: 470     ctgtccaaggccaaacctacccaatccgcttttaaataagcgaccaacagctgatgaatg 529
               |||||| || |||||||| |||| ||| ||||||||||| || |||||||||||||| ||
Sbjct: 3326128 ctgtcctagcccaaacctccccagtccacttttaaataaacgtccaacagctgatgagtg 3326069

                                                                           
Query: 530     atactcaaggccaggtatgtcaaatctcgtcaacacagctaatatcaacttataaagcaa 589
               ||| ||||||||||| |||||| | || | ||| |||||||||| ||||||||| |||||
Sbjct: 3326068 atattcaaggccaggaatgtcataccttgccaagacagctaatagcaacttatagagcaa 3326009

                                                                           
Query: 590     gccttttcttgagtagctatcagtctcaaaccgactcagtgctgccaacccttctccaag 649
               |||||||||||||||  | ||||||||||| |  ||||||||||| |  |||||||||||
Sbjct: 3326008 gccttttcttgagtatatgtcagtctcaaatctgctcagtgctgctaggccttctccaag 3325949

                                                                           
Query: 650     agcttgattccttaatctcatactggacaagctatggaagaacttaaagagttgatctac 709
               || ||| |||||||| ||||||||||||||  | || ||||||||||| || || || ||
Sbjct: 3325948 agtttggttccttaacctcatactggacaaattgtgaaagaacttaaaaagctggtcaac 3325889

                                                 
Query: 710     cctatcacgtacttccaacttaagttgcatgtcc 743
                || || |||||||||||||||||||||||||||
Sbjct: 3325888 tctgtctcgtacttccaacttaagttgcatgtcc 3325855



 Score =  172 bits (87), Expect = 1e-39
 Identities = 120/131 (91%)
 Strand = Plus / Minus

                                                                           
Query: 272     ctaagtaaagctggatgagcctaacattaactcaaacatgtcatctggggtgagaagggt 331
               |||| |||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||
Sbjct: 3327350 ctaactaaagctggatgagcccaacatcaactcaaacatgtcatctggggtaagaagggt 3327291

                                                                           
Query: 332     tgtaccaccaagaatgagctgcacatcaggtctgccgctctctgagattgccttcatgac 391
               ||| || |||||||| |||| |||||||||||||| ||| ||||| ||||||||||||||
Sbjct: 3327290 tgttcccccaagaataagctccacatcaggtctgctgctgtctgatattgccttcatgac 3327231

                          
Query: 392     ttcccggacct 402
               |||||||||||
Sbjct: 3327230 ttcccggacct 3327220



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 65/74 (87%)
 Strand = Plus / Minus

                                                                           
Query: 399     acctcaagagtattgatgcctcccacaacaaaaacaatgagaaaactttgatcgccaaaa 458
               |||||||| | |||||||||||||||||||||||| |||||||  ||||| |||||||| 
Sbjct: 3326280 acctcaagggcattgatgcctcccacaacaaaaacgatgagaatgctttggtcgccaaag 3326221

                             
Query: 459     tttggtttggactg 472
                ||||||| |||||
Sbjct: 3326220 cttggtttagactg 3326207
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>gb|AY107998.1| Zea mays PCO144209 mRNA sequence
          Length = 466

 Score =  135 bits (68), Expect = 2e-28
 Identities = 229/283 (80%)
 Strand = Plus / Minus

                                                                       
Query: 461 tggtttggactgtccaaggccaaacctacccaatccgcttttaaataagcgaccaacagc 520
           |||||| ||||||| ||| || || ||||| | ||| ||||| ||||  |||||||||| 
Sbjct: 420 tggtttagactgtcnaagcccgaatctacctagtccacttttgaatagacgaccaacagt 361

                                                                       
Query: 521 tgatgaatgatactcaaggccaggtatgtcaaatctcgtcaacacagctaatatcaactt 580
           ||||||||||||||| ||||||||||  ||  | |||| ||| | ||||||||  |||||
Sbjct: 360 tgatgaatgatactcgaggccaggtacatcgtacctcgacaagagagctaatagtaactt 301

                                                                       
Query: 581 ataaagcaagccttttcttgagtagctatcagtctcaaaccgactcagtgctgccaaccc 640
           ||||||||||| ||| || ||||| |  |||||||| || | ||| | |||||| |  ||
Sbjct: 300 ataaagcaagcatttcctcgagtaaccgtcagtctcgaatctacttaatgctgctatacc 241

                                                                       
Query: 641 ttctccaagagcttgattccttaatctcatactggacaagctatggaagaacttaaagag 700
           ||| ||||| |||||||| ||||| ||||||||||| ||  | || ||||| || || ||
Sbjct: 240 ttcaccaagggcttgatttcttaacctcatactggataatttgtgaaagaatttgaaaag 181

                                                      
Query: 701 ttgatctaccctatcacgtacttccaacttaagttgcatgtcc 743
            ||||| || ||||| || ||||||||||||||||||||||||
Sbjct: 180 ctgatcaactctatctcgcacttccaacttaagttgcatgtcc 138
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>gb|AC106803.3| Homo sapiens chromosome 5 clone RP11-478A7, complete sequence
          Length = 169122

 Score = 48.1 bits (24), Expect = 0.042
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                         
Query: 166   caaaaatcccatctcagaagcaaaacaa 193
             ||||||||||||||||||| ||||||||
Sbjct: 30221 caaaaatcccatctcagaaacaaaacaa 30248
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>gb|AC073278.9| Homo sapiens BAC clone RP11-661L8 from 7, complete sequence
          Length = 200807

 Score = 46.1 bits (23), Expect = 0.17
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                         
Query: 415    tgcctcccacaacaaaaacaatgagaa 441
              |||||||||| ||||||||||||||||
Sbjct: 191113 tgcctcccaccacaaaaacaatgagaa 191139
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>emb|AL159972.8| Human DNA sequence from clone RP11-157H4 on chromosome 13 Contains part
             of the KLF12 gene for Kruppel-like factor 12, complete
             sequence
          Length = 149512

 Score = 46.1 bits (23), Expect = 0.17
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 487   tacccaatccgcttttaaataag 509
             |||||||||||||||||||||||
Sbjct: 60422 tacccaatccgcttttaaataag 60444
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>gb|AC151408.1| Pan troglodytes chromosome X clone PTB-007P20 map human ortholog q23,
             complete sequence
          Length = 68318

 Score = 44.1 bits (22), Expect = 0.65
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 186   caaaacaatgtacagattaaat 207
             ||||||||||||||||||||||
Sbjct: 27525 caaaacaatgtacagattaaat 27546
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>gb|AC006374.2| Homo sapiens BAC clone RP11-357D2 from 7, complete sequence
          Length = 160626

 Score = 44.1 bits (22), Expect = 0.65
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 192   aatgtacagattaaatttacat 213
             ||||||||||||||||||||||
Sbjct: 41544 aatgtacagattaaatttacat 41523
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>gb|AC164957.2| Mus musculus BAC clone RP23-480L9 from chromosome 17, complete sequence
          Length = 183439

 Score = 44.1 bits (22), Expect = 0.65
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 189   aacaatgtacagattaaattta 210
             ||||||||||||||||||||||
Sbjct: 47295 aacaatgtacagattaaattta 47316
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>emb|AL031117.1|HS914P14 Human DNA sequence from clone RP5-914P14 on chromosome Xq23 Contains the
              3' end of the PAK3 gene for p21 (CDKN1A)-activated kinase
              3, the CAPN6 gene for calpain 6, a glutamate dehydrogenase
              1 (GLUD1) pseudogene and the 3' end of the DCX gene for
              doublecortex; lissencephaly, X-linked (doublecortin),
              complete sequence
          Length = 155375

 Score = 44.1 bits (22), Expect = 0.65
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 186    caaaacaatgtacagattaaat 207
              ||||||||||||||||||||||
Sbjct: 103409 caaaacaatgtacagattaaat 103430
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>ref|NM_129831.2| Arabidopsis thaliana unknown protein AT2G42700 mRNA, complete cds
          Length = 2535

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                         
Query: 460  ttggtttggactgtccaaggccaaacctacccaatccgcttttaa 504
            ||||||| | ||| ||||| |||||||| || |||||||||||||
Sbjct: 2291 ttggttttgcctgaccaagaccaaaccttccaaatccgcttttaa 2247
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>gb|AC166826.4| Mus musculus BAC clone RP23-370K22 from chromosome 16, complete sequence
          Length = 180840

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 564    acagctaatatcaacttataa 584
              |||||||||||||||||||||
Sbjct: 158535 acagctaatatcaacttataa 158555
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>gb|AC126670.4| Mus musculus BAC clone RP24-469G14 from chromosome 1, complete sequence
          Length = 200595

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 536   aaggccaggtatgtcaaatct 556
             |||||||||||||||||||||
Sbjct: 92946 aaggccaggtatgtcaaatct 92926
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>gb|AC125146.3| Mus musculus BAC clone RP24-348B1 from chromosome 2, complete sequence
          Length = 212563

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 564    acagctaatatcaacttataa 584
              |||||||||||||||||||||
Sbjct: 167067 acagctaatatcaacttataa 167087
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>gb|AC122838.3| Mus musculus BAC clone RP23-191E1 from 3, complete sequence
          Length = 196023

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 564    acagctaatatcaacttataa 584
              |||||||||||||||||||||
Sbjct: 192713 acagctaatatcaacttataa 192693
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>gb|AC121241.32| Medicago truncatula clone mth2-4n3, complete sequence
          Length = 114591

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 13    atatatgaatatagtccaaaggtat 37
             ||||||||||||||| |||||||||
Sbjct: 14485 atatatgaatatagttcaaaggtat 14509
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>gb|AC146749.23| Medicago truncatula clone mth2-145a1, complete sequence
          Length = 130793

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 13     atatatgaatatagtccaaaggtat 37
              ||||||||||||||| |||||||||
Sbjct: 120316 atatatgaatatagttcaaaggtat 120292
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>emb|Z97353.3|HS90L6 Human DNA sequence from clone RP1-90L6 on chromosome 22q11.21-11.23,
              complete sequence
          Length = 190837

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 687    aagaacttaaagagttgatct 707
              |||||||||||||||||||||
Sbjct: 170705 aagaacttaaagagttgatct 170725
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>emb|AL606467.5| Human DNA sequence from clone RP13-172P16 on chromosome Xp21.1-21.3
             Contains a High mobility group protein 1
             (HMG-1)(LOC340573) pseudogene, a novel gene and the 5'end
             of a novel gene (LOC158730), complete sequence
          Length = 138093

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 28    ccaaaggtatagtctaaatac 48
             |||||||||||||||||||||
Sbjct: 22518 ccaaaggtatagtctaaatac 22538
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>gb|L05770.5|ACCPCAOP Acinetobacter sp. ADP1 dca-pca-qui-pob-hca supraoperonic gene cluster,
             complete sequence
          Length = 45324

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 424   caacaaaaacaatgagaaaac 444
             |||||||||||||||||||||
Sbjct: 20276 caacaaaaacaatgagaaaac 20256
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>emb|CR543861.1| Acinetobacter sp. ADP1 complete genome
          Length = 3598621

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 424     caacaaaaacaatgagaaaac 444
               |||||||||||||||||||||
Sbjct: 1714124 caacaaaaacaatgagaaaac 1714104
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>gb|AC157607.4| Mus musculus chromosome 1, clone RP23-401G11, complete sequence
          Length = 200421

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 564    acagctaatatcaacttataa 584
              |||||||||||||||||||||
Sbjct: 134020 acagctaatatcaacttataa 134000
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>gb|AC010243.7| Homo sapiens chromosome 5 clone CTC-361G14, complete sequence
          Length = 178858

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 423   acaacaaaaacaatgagaaaa 443
             |||||||||||||||||||||
Sbjct: 65191 acaacaaaaacaatgagaaaa 65171
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>gb|AC103808.2| Homo sapiens chromosome 18, clone RP11-94B19, complete sequence
          Length = 152722

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 429   aaaacaatgagaaaactttga 449
             |||||||||||||||||||||
Sbjct: 92312 aaaacaatgagaaaactttga 92292
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>gb|AC087373.4| Homo sapiens chromosome 11, clone RP11-54J7, complete sequence
          Length = 200604

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 186   caaaacaatgtacagattaaa 206
             |||||||||||||||||||||
Sbjct: 62585 caaaacaatgtacagattaaa 62605
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>gb|AC027627.6| Homo sapiens BAC clone RP11-376O6 from 4, complete sequence
          Length = 191665

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 171   atcccatctcagaagcaaaacaatg 195
             ||||||||||||||||| |||||||
Sbjct: 26373 atcccatctcagaagcataacaatg 26397
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>gb|AC004155.1|AC004155 Mus musculus DNA from BAC 10818 containing the Ercc-4 gene, complete
             sequence
          Length = 128026

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 564   acagctaatatcaacttataa 584
             |||||||||||||||||||||
Sbjct: 39416 acagctaatatcaacttataa 39396
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>gb|AC093721.3| Homo sapiens BAC clone CTD-2010B10 from 4, complete sequence
          Length = 128148

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 425   aacaaaaacaatgagaaaact 445
             |||||||||||||||||||||
Sbjct: 46197 aacaaaaacaatgagaaaact 46217
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>emb|CT485603.4| RP43-005L22, complete sequence
          Length = 204041

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 28    ccaaaggtatagtctaaatac 48
             |||||||||||||||||||||
Sbjct: 22785 ccaaaggtatagtctaaatac 22805
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>gb|AC159248.4| Mus musculus BAC clone RP24-254P11 from chromosome 16, complete
             sequence
          Length = 172440

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 564   acagctaatatcaacttataa 584
             |||||||||||||||||||||
Sbjct: 63751 acagctaatatcaacttataa 63771
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>gb|AC140380.3| Mus musculus BAC clone RP23-175B15 from 3, complete sequence
          Length = 206396

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 564   acagctaatatcaacttataa 584
             |||||||||||||||||||||
Sbjct: 57745 acagctaatatcaacttataa 57765
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>emb|AL929065.4| Mouse DNA sequence from clone RP23-270H4 on chromosome 2, complete
              sequence
          Length = 173846

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 564    acagctaatatcaacttataa 584
              |||||||||||||||||||||
Sbjct: 130665 acagctaatatcaacttataa 130645


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7,454,128
Number of Sequences: 3902068
Number of extensions: 7454128
Number of successful extensions: 156406
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 156197
Number of HSP's gapped (non-prelim): 208
length of query: 743
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 720
effective length of database: 17,143,297,704
effective search space: 12343174346880
effective search space used: 12343174346880
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)
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