>RUVB_ZYMMO (Q5NR72) Holliday junction ATP-dependent DNA helicase ruvB (EC|
           3.6.1.-)
          Length = 347

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 15/28 (53%), Positives = 17/28 (60%)
 Frame = -2

Query: 537 ARGRALNGLGWPPFRFTNPRETPNTGRH 454
           ARGR LNGL W     T+PRE    G+H
Sbjct: 312 ARGRQLNGLAWRHLGLTDPREA--EGKH 337

>AROB_NITMU (Q2YB61) 3-dehydroquinate synthase (EC 4.2.3.4)|
          Length = 366

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 15/42 (35%), Positives = 22/42 (52%)
 Frame = +1

Query: 118 SILTSDISRSCHQKPSPIDRTSRY*HLKKLLSRSRRFGESLE 243
           SILT  I RSC  K   ++   R   ++ LL+    FG ++E
Sbjct: 217 SILTDAIKRSCQHKAEVVEEDERESGMRALLNLGHTFGHAIE 258

>RAD17_MOUSE (Q6NXW6) Cell cycle checkpoint protein RAD17|
          Length = 688

 Score = 29.3 bits (64), Expect = 9.3
 Identities = 19/63 (30%), Positives = 30/63 (47%)
 Frame = -3

Query: 479 GKLRIQAVILSTDRLIGC*DPKSRGKQPRSYAKVPKQSLSGKGSDRAMTTRRWAWKQPSF 300
           G+L+++A+   TDR +G  DP S  + P S  + P Q   G+ +  A       W  P  
Sbjct: 592 GRLKMEAL---TDRELGLIDPDSGDESPHSGGQ-PAQEAPGEPAQAAQNADPETWSLPLS 647

Query: 299 EES 291
           + S
Sbjct: 648 QNS 650


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 88,825,275
Number of Sequences: 219361
Number of extensions: 1866009
Number of successful extensions: 4220
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4119
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4218
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5367617986
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)