ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd15p08 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AJ006296.1|HVU6296 Hordeum vulgare partial mRNA for chlorophyll a/b-binding protein Length = 470 Score = 757 bits (382), Expect = 0.0 Identities = 392/394 (99%), Gaps = 1/394 (0%) Strand = Plus / Minus Query: 1 gcagctctcctatgtgatcggacc-gcattataatcaacaaaggatctttgcgataccct 59 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 394 gcagctctcctatgtgatcggaccagcattataatcaacaaaggatctttgcgataccct 335 Query: 60 ctcatccatcactcgtcatacaaaaccaaagcacgttcgttacacggacgcgcgttcgtc 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 334 ctcatccatcactcgtcatacaaaaccaaagcacgttcgttacacggacgcgcgttcgtc 275 Query: 120 cattttgcagctgagctgacagaaactgctcgaccaccgaccacttaagaggagccgaag 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 274 cattttgcagctgagctgacagaaactgctcgaccaccgaccacttaagaggagccgaag 215 Query: 180 gtgtcgaagatggtggtgtgcagcgggtcgctgaggtgggtggcccagttgttgagcgga 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 214 gtgtcgaagatggtggtgtgcagcgggtcgctgaggtgggtggcccagttgttgagcgga 155 Query: 240 cccttgccggtggcggcggcctgcacggcgaagccgaggaaggcgaccatggcgaggcgg 299 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 154 cccttgccggtggcggcggcctgcaccgcgaagccgaggaaggcgaccatggcgaggcgg 95 Query: 300 gcgtgcttgatctccgccagctgcagagtctccttcttctccgggtccgccgcgagtccc 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94 gcgtgcttgatctccgccagctgcagagtctccttcttctccgggtccgccgcgagtccc 35 Query: 360 agcgggtcgaagtaggagcctccggggtagagcc 393 |||||||||||||||||||||||||||||||||| Sbjct: 34 agcgggtcgaagtaggagcctccggggtagagcc 1
>ref|XM_507368.1| PREDICTED Oryza sativa (japonica cultivar-group), P0567H04.15 mRNA Length = 1156 Score = 654 bits (330), Expect = 0.0 Identities = 428/458 (93%), Gaps = 2/458 (0%) Strand = Plus / Minus Query: 176 gaaggtgtcgaagatggtggtgtgcagcgggtcgctgaggtgggtggcccagttgttgag 235 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 902 gaaggtgtcgaagatggtggtgtggagcgggtcgctgaggtgggtggcccagttgttgag 843 Query: 236 cggacccttgccggtggcggcggcctgcacggcgaagccgaggaaggcgaccatggcgag 295 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 842 gggccccttgccggtggcggcggcctgcacggcgaagccgaggaaggcgaccatggcgag 783 Query: 296 gcgggcgtgcttgatctccgccagctgcagagtctccttcttctccgggtccgccgcgag 355 |||||||||||||||||||||||||||||| |||||||||||||||||||| ||| | Sbjct: 782 gcgggcgtgcttgatctccgccagctgcagccgctccttcttctccgggtccgacgccaa 723 Query: 356 tcccagcgggtcgaagtaggagcctccggggtagagcctcctctccgggtccagctccgc 415 || ||||||||||||||||| || || ||||| |||||| ||||||||||||||||||| Sbjct: 722 cccgagcgggtcgaagtaggacccccccgggtacagcctcttctccgggtccagctccgc 663 Query: 416 gttgcgttggaactcgatgtacccgatcaccagcacctcgatccagatgagcgtggtgat 475 |||||| |||||||||||||| ||||| || ||||||||||||||||| ||||| | ||| Sbjct: 662 gttgcgctggaactcgatgtagccgatgacgagcacctcgatccagatcagcgtcgagat 603 Query: 476 cgtgaacggcagcggctgacccaggtacgacgacccgtccaccagctccaccttgcccgg 535 || ||||||||||||||| ||||||||||||||||| |||||||||||||||||| |||| Sbjct: 602 cgagaacggcagcggctgccccaggtacgacgacccatccaccagctccaccttg-ccgg 544 Query: 536 cgtcctgccaggtgacgccggtgagccactcgacggtgagggcgcccgagggtggcgagc 595 |||| ||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| Sbjct: 543 cgtcttgccaggtgacgccggtgagccactcgacggagagggcg-ccgagggtggcgagc 485 Query: 596 atggcccagcggccgtggatgagctcgcactcgcggaa 633 |||||||||||||||||||||||||||||||||||||| Sbjct: 484 atggcccagcggccgtggatgagctcgcactcgcggaa 447
>ref|XM_478692.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1152 Score = 654 bits (330), Expect = 0.0 Identities = 428/458 (93%), Gaps = 2/458 (0%) Strand = Plus / Minus Query: 176 gaaggtgtcgaagatggtggtgtgcagcgggtcgctgaggtgggtggcccagttgttgag 235 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 897 gaaggtgtcgaagatggtggtgtggagcgggtcgctgaggtgggtggcccagttgttgag 838 Query: 236 cggacccttgccggtggcggcggcctgcacggcgaagccgaggaaggcgaccatggcgag 295 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 837 gggccccttgccggtggcggcggcctgcacggcgaagccgaggaaggcgaccatggcgag 778 Query: 296 gcgggcgtgcttgatctccgccagctgcagagtctccttcttctccgggtccgccgcgag 355 |||||||||||||||||||||||||||||| |||||||||||||||||||| ||| | Sbjct: 777 gcgggcgtgcttgatctccgccagctgcagccgctccttcttctccgggtccgacgccaa 718 Query: 356 tcccagcgggtcgaagtaggagcctccggggtagagcctcctctccgggtccagctccgc 415 || ||||||||||||||||| || || ||||| |||||| ||||||||||||||||||| Sbjct: 717 cccgagcgggtcgaagtaggacccccccgggtacagcctcttctccgggtccagctccgc 658 Query: 416 gttgcgttggaactcgatgtacccgatcaccagcacctcgatccagatgagcgtggtgat 475 |||||| |||||||||||||| ||||| || ||||||||||||||||| ||||| | ||| Sbjct: 657 gttgcgctggaactcgatgtagccgatgacgagcacctcgatccagatcagcgtcgagat 598 Query: 476 cgtgaacggcagcggctgacccaggtacgacgacccgtccaccagctccaccttgcccgg 535 || ||||||||||||||| ||||||||||||||||| |||||||||||||||||| |||| Sbjct: 597 cgagaacggcagcggctgccccaggtacgacgacccatccaccagctccaccttg-ccgg 539 Query: 536 cgtcctgccaggtgacgccggtgagccactcgacggtgagggcgcccgagggtggcgagc 595 |||| ||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| Sbjct: 538 cgtcttgccaggtgacgccggtgagccactcgacggagagggcg-ccgagggtggcgagc 480 Query: 596 atggcccagcggccgtggatgagctcgcactcgcggaa 633 |||||||||||||||||||||||||||||||||||||| Sbjct: 479 atggcccagcggccgtggatgagctcgcactcgcggaa 442
>ref|XM_507367.1| PREDICTED Oryza sativa (japonica cultivar-group), P0567H04.15 mRNA Length = 1162 Score = 654 bits (330), Expect = 0.0 Identities = 428/458 (93%), Gaps = 2/458 (0%) Strand = Plus / Minus Query: 176 gaaggtgtcgaagatggtggtgtgcagcgggtcgctgaggtgggtggcccagttgttgag 235 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 904 gaaggtgtcgaagatggtggtgtggagcgggtcgctgaggtgggtggcccagttgttgag 845 Query: 236 cggacccttgccggtggcggcggcctgcacggcgaagccgaggaaggcgaccatggcgag 295 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 844 gggccccttgccggtggcggcggcctgcacggcgaagccgaggaaggcgaccatggcgag 785 Query: 296 gcgggcgtgcttgatctccgccagctgcagagtctccttcttctccgggtccgccgcgag 355 |||||||||||||||||||||||||||||| |||||||||||||||||||| ||| | Sbjct: 784 gcgggcgtgcttgatctccgccagctgcagccgctccttcttctccgggtccgacgccaa 725 Query: 356 tcccagcgggtcgaagtaggagcctccggggtagagcctcctctccgggtccagctccgc 415 || ||||||||||||||||| || || ||||| |||||| ||||||||||||||||||| Sbjct: 724 cccgagcgggtcgaagtaggacccccccgggtacagcctcttctccgggtccagctccgc 665 Query: 416 gttgcgttggaactcgatgtacccgatcaccagcacctcgatccagatgagcgtggtgat 475 |||||| |||||||||||||| ||||| || ||||||||||||||||| ||||| | ||| Sbjct: 664 gttgcgctggaactcgatgtagccgatgacgagcacctcgatccagatcagcgtcgagat 605 Query: 476 cgtgaacggcagcggctgacccaggtacgacgacccgtccaccagctccaccttgcccgg 535 || ||||||||||||||| ||||||||||||||||| |||||||||||||||||| |||| Sbjct: 604 cgagaacggcagcggctgccccaggtacgacgacccatccaccagctccaccttg-ccgg 546 Query: 536 cgtcctgccaggtgacgccggtgagccactcgacggtgagggcgcccgagggtggcgagc 595 |||| ||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| Sbjct: 545 cgtcttgccaggtgacgccggtgagccactcgacggagagggcg-ccgagggtggcgagc 487 Query: 596 atggcccagcggccgtggatgagctcgcactcgcggaa 633 |||||||||||||||||||||||||||||||||||||| Sbjct: 486 atggcccagcggccgtggatgagctcgcactcgcggaa 449
>ref|XM_507366.1| PREDICTED Oryza sativa (japonica cultivar-group), P0567H04.15 mRNA Length = 1183 Score = 654 bits (330), Expect = 0.0 Identities = 428/458 (93%), Gaps = 2/458 (0%) Strand = Plus / Minus Query: 176 gaaggtgtcgaagatggtggtgtgcagcgggtcgctgaggtgggtggcccagttgttgag 235 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 904 gaaggtgtcgaagatggtggtgtggagcgggtcgctgaggtgggtggcccagttgttgag 845 Query: 236 cggacccttgccggtggcggcggcctgcacggcgaagccgaggaaggcgaccatggcgag 295 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 844 gggccccttgccggtggcggcggcctgcacggcgaagccgaggaaggcgaccatggcgag 785 Query: 296 gcgggcgtgcttgatctccgccagctgcagagtctccttcttctccgggtccgccgcgag 355 |||||||||||||||||||||||||||||| |||||||||||||||||||| ||| | Sbjct: 784 gcgggcgtgcttgatctccgccagctgcagccgctccttcttctccgggtccgacgccaa 725 Query: 356 tcccagcgggtcgaagtaggagcctccggggtagagcctcctctccgggtccagctccgc 415 || ||||||||||||||||| || || ||||| |||||| ||||||||||||||||||| Sbjct: 724 cccgagcgggtcgaagtaggacccccccgggtacagcctcttctccgggtccagctccgc 665 Query: 416 gttgcgttggaactcgatgtacccgatcaccagcacctcgatccagatgagcgtggtgat 475 |||||| |||||||||||||| ||||| || ||||||||||||||||| ||||| | ||| Sbjct: 664 gttgcgctggaactcgatgtagccgatgacgagcacctcgatccagatcagcgtcgagat 605 Query: 476 cgtgaacggcagcggctgacccaggtacgacgacccgtccaccagctccaccttgcccgg 535 || ||||||||||||||| ||||||||||||||||| |||||||||||||||||| |||| Sbjct: 604 cgagaacggcagcggctgccccaggtacgacgacccatccaccagctccaccttg-ccgg 546 Query: 536 cgtcctgccaggtgacgccggtgagccactcgacggtgagggcgcccgagggtggcgagc 595 |||| ||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| Sbjct: 545 cgtcttgccaggtgacgccggtgagccactcgacggagagggcg-ccgagggtggcgagc 487 Query: 596 atggcccagcggccgtggatgagctcgcactcgcggaa 633 |||||||||||||||||||||||||||||||||||||| Sbjct: 486 atggcccagcggccgtggatgagctcgcactcgcggaa 449
>ref|XM_506405.2| PREDICTED Oryza sativa (japonica cultivar-group), P0567H04.15 mRNA Length = 1221 Score = 654 bits (330), Expect = 0.0 Identities = 428/458 (93%), Gaps = 2/458 (0%) Strand = Plus / Minus Query: 176 gaaggtgtcgaagatggtggtgtgcagcgggtcgctgaggtgggtggcccagttgttgag 235 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 918 gaaggtgtcgaagatggtggtgtggagcgggtcgctgaggtgggtggcccagttgttgag 859 Query: 236 cggacccttgccggtggcggcggcctgcacggcgaagccgaggaaggcgaccatggcgag 295 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 858 gggccccttgccggtggcggcggcctgcacggcgaagccgaggaaggcgaccatggcgag 799 Query: 296 gcgggcgtgcttgatctccgccagctgcagagtctccttcttctccgggtccgccgcgag 355 |||||||||||||||||||||||||||||| |||||||||||||||||||| ||| | Sbjct: 798 gcgggcgtgcttgatctccgccagctgcagccgctccttcttctccgggtccgacgccaa 739 Query: 356 tcccagcgggtcgaagtaggagcctccggggtagagcctcctctccgggtccagctccgc 415 || ||||||||||||||||| || || ||||| |||||| ||||||||||||||||||| Sbjct: 738 cccgagcgggtcgaagtaggacccccccgggtacagcctcttctccgggtccagctccgc 679 Query: 416 gttgcgttggaactcgatgtacccgatcaccagcacctcgatccagatgagcgtggtgat 475 |||||| |||||||||||||| ||||| || ||||||||||||||||| ||||| | ||| Sbjct: 678 gttgcgctggaactcgatgtagccgatgacgagcacctcgatccagatcagcgtcgagat 619 Query: 476 cgtgaacggcagcggctgacccaggtacgacgacccgtccaccagctccaccttgcccgg 535 || ||||||||||||||| ||||||||||||||||| |||||||||||||||||| |||| Sbjct: 618 cgagaacggcagcggctgccccaggtacgacgacccatccaccagctccaccttg-ccgg 560 Query: 536 cgtcctgccaggtgacgccggtgagccactcgacggtgagggcgcccgagggtggcgagc 595 |||| ||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| Sbjct: 559 cgtcttgccaggtgacgccggtgagccactcgacggagagggcg-ccgagggtggcgagc 501 Query: 596 atggcccagcggccgtggatgagctcgcactcgcggaa 633 |||||||||||||||||||||||||||||||||||||| Sbjct: 500 atggcccagcggccgtggatgagctcgcactcgcggaa 463
>dbj|AK119534.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-B02, full insert sequence Length = 1234 Score = 654 bits (330), Expect = 0.0 Identities = 428/458 (93%), Gaps = 2/458 (0%) Strand = Plus / Minus Query: 176 gaaggtgtcgaagatggtggtgtgcagcgggtcgctgaggtgggtggcccagttgttgag 235 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 904 gaaggtgtcgaagatggtggtgtggagcgggtcgctgaggtgggtggcccagttgttgag 845 Query: 236 cggacccttgccggtggcggcggcctgcacggcgaagccgaggaaggcgaccatggcgag 295 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 844 gggccccttgccggtggcggcggcctgcacggcgaagccgaggaaggcgaccatggcgag 785 Query: 296 gcgggcgtgcttgatctccgccagctgcagagtctccttcttctccgggtccgccgcgag 355 |||||||||||||||||||||||||||||| |||||||||||||||||||| ||| | Sbjct: 784 gcgggcgtgcttgatctccgccagctgcagccgctccttcttctccgggtccgacgccaa 725 Query: 356 tcccagcgggtcgaagtaggagcctccggggtagagcctcctctccgggtccagctccgc 415 || ||||||||||||||||| || || ||||| |||||| ||||||||||||||||||| Sbjct: 724 cccgagcgggtcgaagtaggacccccccgggtacagcctcttctccgggtccagctccgc 665 Query: 416 gttgcgttggaactcgatgtacccgatcaccagcacctcgatccagatgagcgtggtgat 475 |||||| |||||||||||||| ||||| || ||||||||||||||||| ||||| | ||| Sbjct: 664 gttgcgctggaactcgatgtagccgatgacgagcacctcgatccagatcagcgtcgagat 605 Query: 476 cgtgaacggcagcggctgacccaggtacgacgacccgtccaccagctccaccttgcccgg 535 || ||||||||||||||| ||||||||||||||||| |||||||||||||||||| |||| Sbjct: 604 cgagaacggcagcggctgccccaggtacgacgacccatccaccagctccaccttg-ccgg 546 Query: 536 cgtcctgccaggtgacgccggtgagccactcgacggtgagggcgcccgagggtggcgagc 595 |||| ||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| Sbjct: 545 cgtcttgccaggtgacgccggtgagccactcgacggagagggcg-ccgagggtggcgagc 487 Query: 596 atggcccagcggccgtggatgagctcgcactcgcggaa 633 |||||||||||||||||||||||||||||||||||||| Sbjct: 486 atggcccagcggccgtggatgagctcgcactcgcggaa 449
>dbj|AK104619.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-F11, full insert sequence Length = 1152 Score = 654 bits (330), Expect = 0.0 Identities = 428/458 (93%), Gaps = 2/458 (0%) Strand = Plus / Minus Query: 176 gaaggtgtcgaagatggtggtgtgcagcgggtcgctgaggtgggtggcccagttgttgag 235 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 897 gaaggtgtcgaagatggtggtgtggagcgggtcgctgaggtgggtggcccagttgttgag 838 Query: 236 cggacccttgccggtggcggcggcctgcacggcgaagccgaggaaggcgaccatggcgag 295 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 837 gggccccttgccggtggcggcggcctgcacggcgaagccgaggaaggcgaccatggcgag 778 Query: 296 gcgggcgtgcttgatctccgccagctgcagagtctccttcttctccgggtccgccgcgag 355 |||||||||||||||||||||||||||||| |||||||||||||||||||| ||| | Sbjct: 777 gcgggcgtgcttgatctccgccagctgcagccgctccttcttctccgggtccgacgccaa 718 Query: 356 tcccagcgggtcgaagtaggagcctccggggtagagcctcctctccgggtccagctccgc 415 || ||||||||||||||||| || || ||||| |||||| ||||||||||||||||||| Sbjct: 717 cccgagcgggtcgaagtaggacccccccgggtacagcctcttctccgggtccagctccgc 658 Query: 416 gttgcgttggaactcgatgtacccgatcaccagcacctcgatccagatgagcgtggtgat 475 |||||| |||||||||||||| ||||| || ||||||||||||||||| ||||| | ||| Sbjct: 657 gttgcgctggaactcgatgtagccgatgacgagcacctcgatccagatcagcgtcgagat 598 Query: 476 cgtgaacggcagcggctgacccaggtacgacgacccgtccaccagctccaccttgcccgg 535 || ||||||||||||||| ||||||||||||||||| |||||||||||||||||| |||| Sbjct: 597 cgagaacggcagcggctgccccaggtacgacgacccatccaccagctccaccttg-ccgg 539 Query: 536 cgtcctgccaggtgacgccggtgagccactcgacggtgagggcgcccgagggtggcgagc 595 |||| ||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| Sbjct: 538 cgtcttgccaggtgacgccggtgagccactcgacggagagggcg-ccgagggtggcgagc 480 Query: 596 atggcccagcggccgtggatgagctcgcactcgcggaa 633 |||||||||||||||||||||||||||||||||||||| Sbjct: 479 atggcccagcggccgtggatgagctcgcactcgcggaa 442
>dbj|AK103924.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-C12, full insert sequence Length = 1183 Score = 654 bits (330), Expect = 0.0 Identities = 428/458 (93%), Gaps = 2/458 (0%) Strand = Plus / Minus Query: 176 gaaggtgtcgaagatggtggtgtgcagcgggtcgctgaggtgggtggcccagttgttgag 235 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 904 gaaggtgtcgaagatggtggtgtggagcgggtcgctgaggtgggtggcccagttgttgag 845 Query: 236 cggacccttgccggtggcggcggcctgcacggcgaagccgaggaaggcgaccatggcgag 295 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 844 gggccccttgccggtggcggcggcctgcacggcgaagccgaggaaggcgaccatggcgag 785 Query: 296 gcgggcgtgcttgatctccgccagctgcagagtctccttcttctccgggtccgccgcgag 355 |||||||||||||||||||||||||||||| |||||||||||||||||||| ||| | Sbjct: 784 gcgggcgtgcttgatctccgccagctgcagccgctccttcttctccgggtccgacgccaa 725 Query: 356 tcccagcgggtcgaagtaggagcctccggggtagagcctcctctccgggtccagctccgc 415 || ||||||||||||||||| || || ||||| |||||| ||||||||||||||||||| Sbjct: 724 cccgagcgggtcgaagtaggacccccccgggtacagcctcttctccgggtccagctccgc 665 Query: 416 gttgcgttggaactcgatgtacccgatcaccagcacctcgatccagatgagcgtggtgat 475 |||||| |||||||||||||| ||||| || ||||||||||||||||| ||||| | ||| Sbjct: 664 gttgcgctggaactcgatgtagccgatgacgagcacctcgatccagatcagcgtcgagat 605 Query: 476 cgtgaacggcagcggctgacccaggtacgacgacccgtccaccagctccaccttgcccgg 535 || ||||||||||||||| ||||||||||||||||| |||||||||||||||||| |||| Sbjct: 604 cgagaacggcagcggctgccccaggtacgacgacccatccaccagctccaccttg-ccgg 546 Query: 536 cgtcctgccaggtgacgccggtgagccactcgacggtgagggcgcccgagggtggcgagc 595 |||| ||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| Sbjct: 545 cgtcttgccaggtgacgccggtgagccactcgacggagagggcg-ccgagggtggcgagc 487 Query: 596 atggcccagcggccgtggatgagctcgcactcgcggaa 633 |||||||||||||||||||||||||||||||||||||| Sbjct: 486 atggcccagcggccgtggatgagctcgcactcgcggaa 449
>dbj|AK098992.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013098H13, full insert sequence Length = 1156 Score = 654 bits (330), Expect = 0.0 Identities = 428/458 (93%), Gaps = 2/458 (0%) Strand = Plus / Minus Query: 176 gaaggtgtcgaagatggtggtgtgcagcgggtcgctgaggtgggtggcccagttgttgag 235 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 902 gaaggtgtcgaagatggtggtgtggagcgggtcgctgaggtgggtggcccagttgttgag 843 Query: 236 cggacccttgccggtggcggcggcctgcacggcgaagccgaggaaggcgaccatggcgag 295 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 842 gggccccttgccggtggcggcggcctgcacggcgaagccgaggaaggcgaccatggcgag 783 Query: 296 gcgggcgtgcttgatctccgccagctgcagagtctccttcttctccgggtccgccgcgag 355 |||||||||||||||||||||||||||||| |||||||||||||||||||| ||| | Sbjct: 782 gcgggcgtgcttgatctccgccagctgcagccgctccttcttctccgggtccgacgccaa 723 Query: 356 tcccagcgggtcgaagtaggagcctccggggtagagcctcctctccgggtccagctccgc 415 || ||||||||||||||||| || || ||||| |||||| ||||||||||||||||||| Sbjct: 722 cccgagcgggtcgaagtaggacccccccgggtacagcctcttctccgggtccagctccgc 663 Query: 416 gttgcgttggaactcgatgtacccgatcaccagcacctcgatccagatgagcgtggtgat 475 |||||| |||||||||||||| ||||| || ||||||||||||||||| ||||| | ||| Sbjct: 662 gttgcgctggaactcgatgtagccgatgacgagcacctcgatccagatcagcgtcgagat 603 Query: 476 cgtgaacggcagcggctgacccaggtacgacgacccgtccaccagctccaccttgcccgg 535 || ||||||||||||||| ||||||||||||||||| |||||||||||||||||| |||| Sbjct: 602 cgagaacggcagcggctgccccaggtacgacgacccatccaccagctccaccttg-ccgg 544 Query: 536 cgtcctgccaggtgacgccggtgagccactcgacggtgagggcgcccgagggtggcgagc 595 |||| ||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| Sbjct: 543 cgtcttgccaggtgacgccggtgagccactcgacggagagggcg-ccgagggtggcgagc 485 Query: 596 atggcccagcggccgtggatgagctcgcactcgcggaa 633 |||||||||||||||||||||||||||||||||||||| Sbjct: 484 atggcccagcggccgtggatgagctcgcactcgcggaa 447
>dbj|AK058293.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-F01, full insert sequence Length = 1221 Score = 654 bits (330), Expect = 0.0 Identities = 428/458 (93%), Gaps = 2/458 (0%) Strand = Plus / Minus Query: 176 gaaggtgtcgaagatggtggtgtgcagcgggtcgctgaggtgggtggcccagttgttgag 235 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 918 gaaggtgtcgaagatggtggtgtggagcgggtcgctgaggtgggtggcccagttgttgag 859 Query: 236 cggacccttgccggtggcggcggcctgcacggcgaagccgaggaaggcgaccatggcgag 295 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 858 gggccccttgccggtggcggcggcctgcacggcgaagccgaggaaggcgaccatggcgag 799 Query: 296 gcgggcgtgcttgatctccgccagctgcagagtctccttcttctccgggtccgccgcgag 355 |||||||||||||||||||||||||||||| |||||||||||||||||||| ||| | Sbjct: 798 gcgggcgtgcttgatctccgccagctgcagccgctccttcttctccgggtccgacgccaa 739 Query: 356 tcccagcgggtcgaagtaggagcctccggggtagagcctcctctccgggtccagctccgc 415 || ||||||||||||||||| || || ||||| |||||| ||||||||||||||||||| Sbjct: 738 cccgagcgggtcgaagtaggacccccccgggtacagcctcttctccgggtccagctccgc 679 Query: 416 gttgcgttggaactcgatgtacccgatcaccagcacctcgatccagatgagcgtggtgat 475 |||||| |||||||||||||| ||||| || ||||||||||||||||| ||||| | ||| Sbjct: 678 gttgcgctggaactcgatgtagccgatgacgagcacctcgatccagatcagcgtcgagat 619 Query: 476 cgtgaacggcagcggctgacccaggtacgacgacccgtccaccagctccaccttgcccgg 535 || ||||||||||||||| ||||||||||||||||| |||||||||||||||||| |||| Sbjct: 618 cgagaacggcagcggctgccccaggtacgacgacccatccaccagctccaccttg-ccgg 560 Query: 536 cgtcctgccaggtgacgccggtgagccactcgacggtgagggcgcccgagggtggcgagc 595 |||| ||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| Sbjct: 559 cgtcttgccaggtgacgccggtgagccactcgacggagagggcg-ccgagggtggcgagc 501 Query: 596 atggcccagcggccgtggatgagctcgcactcgcggaa 633 |||||||||||||||||||||||||||||||||||||| Sbjct: 500 atggcccagcggccgtggatgagctcgcactcgcggaa 463
>gb|AF058796.1|AF058796 Oryza sativa chlorophyll a/b-binding protein (RCABP69) mRNA, complete cds Length = 1178 Score = 654 bits (330), Expect = 0.0 Identities = 428/458 (93%), Gaps = 2/458 (0%) Strand = Plus / Minus Query: 176 gaaggtgtcgaagatggtggtgtgcagcgggtcgctgaggtgggtggcccagttgttgag 235 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 902 gaaggtgtcgaagatggtggtgtggagcgggtcgctgaggtgggtggcccagttgttgag 843 Query: 236 cggacccttgccggtggcggcggcctgcacggcgaagccgaggaaggcgaccatggcgag 295 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 842 gggccccttgccggtggcggcggcctgcacggcgaagccgaggaaggcgaccatggcgag 783 Query: 296 gcgggcgtgcttgatctccgccagctgcagagtctccttcttctccgggtccgccgcgag 355 |||||||||||||||||||||||||||||| |||||||||||||||||||| ||| | Sbjct: 782 gcgggcgtgcttgatctccgccagctgcagccgctccttcttctccgggtccgacgccaa 723 Query: 356 tcccagcgggtcgaagtaggagcctccggggtagagcctcctctccgggtccagctccgc 415 || ||||||||||||||||| || || ||||| |||||| ||||||||||||||||||| Sbjct: 722 cccgagcgggtcgaagtaggacccccccgggtacagcctcttctccgggtccagctccgc 663 Query: 416 gttgcgttggaactcgatgtacccgatcaccagcacctcgatccagatgagcgtggtgat 475 |||||| |||||||||||||| ||||| || ||||||||||||||||| ||||| | ||| Sbjct: 662 gttgcgctggaactcgatgtagccgatgacgagcacctcgatccagatcagcgtcgagat 603 Query: 476 cgtgaacggcagcggctgacccaggtacgacgacccgtccaccagctccaccttgcccgg 535 || ||||||||||||||| ||||||||||||||||| |||||||||||||||||| |||| Sbjct: 602 cgagaacggcagcggctgccccaggtacgacgacccatccaccagctccaccttg-ccgg 544 Query: 536 cgtcctgccaggtgacgccggtgagccactcgacggtgagggcgcccgagggtggcgagc 595 |||| ||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| Sbjct: 543 cgtcttgccaggtgacgccggtgagccactcgacggagagggcg-ccgagggtggcgagc 485 Query: 596 atggcccagcggccgtggatgagctcgcactcgcggaa 633 |||||||||||||||||||||||||||||||||||||| Sbjct: 484 atggcccagcggccgtggatgagctcgcactcgcggaa 447
>gb|AY103995.1| Zea mays PCO102677 mRNA sequence Length = 1225 Score = 652 bits (329), Expect = 0.0 Identities = 430/461 (93%), Gaps = 2/461 (0%) Strand = Plus / Minus Query: 174 ccgaaggtgtcgaagatggtggtgtgcagcgggtcgctgaggtgggtggcccagttgttg 233 ||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||||| Sbjct: 918 ccgaacgtgtcgaagatggtggtgtggagcgggtcgctcaggtgggtggcccagttgttg 859 Query: 234 agcggacccttgccggtggcggcggcctgcacggcgaagccgaggaaggcgaccatggcg 293 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 858 agcggccccttgccggtggcggcggcctgcacggcgaagccgaggaaggcgaccatggcg 799 Query: 294 aggcgggcgtgcttgatctccgccagctgcagagtctccttcttctccgggtccgccgcg 353 ||||| |||||||||||||||||||||||||| |||||||||||| ||||| ||||| Sbjct: 798 aggcgcgcgtgcttgatctccgccagctgcagccgctccttcttctcagggtcggccgcc 739 Query: 354 agtcccagcgggtcgaagtaggagcctccggggtagagcctcctctccgggtccagctcc 413 || || |||||||||||||||||||| |||||||| |||||| |||||||||| ||||| Sbjct: 738 aggccgagcgggtcgaagtaggagccgccggggtacagcctcttctccgggtcgagctcg 679 Query: 414 gcgttgcgttggaactcgatgtacccgatcaccagcacctcgatccagatgagcgtggtg 473 |||||||| |||||||||||||| |||||||| ||||||||||||||||||||||| | | Sbjct: 678 gcgttgcgctggaactcgatgtagccgatcacgagcacctcgatccagatgagcgtcgag 619 Query: 474 atcgtgaacggcagcggctgacccaggtacgacgacccgtccaccagctccaccttgccc 533 || | ||||||||||||||| |||||||| || ||||| |||||||||||||||||| || Sbjct: 618 atggagaacggcagcggctggcccaggtaggaggacccatccaccagctccaccttg-cc 560 Query: 534 ggcgtcctgccaggtgacgccggtgagccactcgacggtgagggcgcccgagggtggcga 593 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 559 ggcgtcctgccaggtgacgccggtgagccactcgacggtgagggcg-ccgagggtggcga 501 Query: 594 gcatggcccagcggccgtggatgagctcgcactcgcggaac 634 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 500 gcatggcccagcggccgtggatgagctcgcactcgcggaac 460
>dbj|AK104309.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-D03, full insert sequence Length = 1169 Score = 646 bits (326), Expect = 0.0 Identities = 427/458 (93%), Gaps = 2/458 (0%) Strand = Plus / Minus Query: 176 gaaggtgtcgaagatggtggtgtgcagcgggtcgctgaggtgggtggcccagttgttgag 235 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 911 gaaggtgtcgaagatggtggtgtggagcgggtcgctgaggtgggtggcccagttgttgag 852 Query: 236 cggacccttgccggtggcggcggcctgcacggcgaagccgaggaaggcgaccatggcgag 295 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 851 gggccccttgccggtggcggcggcctgcacggcgaagccgaggaaggcgaccatggcgag 792 Query: 296 gcgggcgtgcttgatctccgccagctgcagagtctccttcttctccgggtccgccgcgag 355 |||||||||||||||||||||||||||||| |||||||||||||||||||| ||| | Sbjct: 791 gcgggcgtgcttgatctccgccagctgcagccgctccttcttctccgggtccgacgccaa 732 Query: 356 tcccagcgggtcgaagtaggagcctccggggtagagcctcctctccgggtccagctccgc 415 || ||||||||||||||||| || || ||||| |||||| ||||||||||||||||||| Sbjct: 731 cccgagcgggtcgaagtaggacccccccgggtacagcctcttctccgggtccagctccgc 672 Query: 416 gttgcgttggaactcgatgtacccgatcaccagcacctcgatccagatgagcgtggtgat 475 |||||| ||||||||| |||| ||||| || ||||||||||||||||| ||||| | ||| Sbjct: 671 gttgcgctggaactcggtgtagccgatgacgagcacctcgatccagatcagcgtcgagat 612 Query: 476 cgtgaacggcagcggctgacccaggtacgacgacccgtccaccagctccaccttgcccgg 535 || ||||||||||||||| ||||||||||||||||| |||||||||||||||||| |||| Sbjct: 611 cgagaacggcagcggctgccccaggtacgacgacccatccaccagctccaccttg-ccgg 553 Query: 536 cgtcctgccaggtgacgccggtgagccactcgacggtgagggcgcccgagggtggcgagc 595 |||| ||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| Sbjct: 552 cgtcttgccaggtgacgccggtgagccactcgacggagagggcg-ccgagggtggcgagc 494 Query: 596 atggcccagcggccgtggatgagctcgcactcgcggaa 633 |||||||||||||||||||||||||||||||||||||| Sbjct: 493 atggcccagcggccgtggatgagctcgcactcgcggaa 456
>emb|Z50801.1|ZMCABCP29 Z.mays mRNA for chlorophyll a/b-binding protein CP29 Length = 1162 Score = 644 bits (325), Expect = 0.0 Identities = 429/461 (93%), Gaps = 2/461 (0%) Strand = Plus / Minus Query: 174 ccgaaggtgtcgaagatggtggtgtgcagcgggtcgctgaggtgggtggcccagttgttg 233 ||||| |||||||||||||| ||||| ||||||||||| ||||||||||||||||||||| Sbjct: 873 ccgaacgtgtcgaagatggtagtgtggagcgggtcgctcaggtgggtggcccagttgttg 814 Query: 234 agcggacccttgccggtggcggcggcctgcacggcgaagccgaggaaggcgaccatggcg 293 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 813 agcggccccttgccggtggcggcggcctgcacggcgaagccgaggaaggcgaccatggcg 754 Query: 294 aggcgggcgtgcttgatctccgccagctgcagagtctccttcttctccgggtccgccgcg 353 ||||| |||||||||||||||||||||||||| |||||||||||| ||||| ||||| Sbjct: 753 aggcgcgcgtgcttgatctccgccagctgcagccgctccttcttctcagggtcggccgcc 694 Query: 354 agtcccagcgggtcgaagtaggagcctccggggtagagcctcctctccgggtccagctcc 413 || || |||||||||||||||||||| |||||||| |||||| |||||||||| ||||| Sbjct: 693 aggccgagcgggtcgaagtaggagccgccggggtacagcctcttctccgggtcgagctcg 634 Query: 414 gcgttgcgttggaactcgatgtacccgatcaccagcacctcgatccagatgagcgtggtg 473 |||||||| |||||||||||||| |||||||| ||||||||||||||||||||||| | | Sbjct: 633 gcgttgcgctggaactcgatgtagccgatcacgagcacctcgatccagatgagcgtcgag 574 Query: 474 atcgtgaacggcagcggctgacccaggtacgacgacccgtccaccagctccaccttgccc 533 || | ||||||||||||||| |||||||| || |||||||||||||||||||||||| || Sbjct: 573 atggagaacggcagcggctggcccaggtaggaggacccgtccaccagctccaccttg-cc 515 Query: 534 ggcgtcctgccaggtgacgccggtgagccactcgacggtgagggcgcccgagggtggcga 593 |||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 514 ggcgtcctgccaggtgacgccggtgagccactcgacggagagggcg-ccgagggtggcga 456 Query: 594 gcatggcccagcggccgtggatgagctcgcactcgcggaac 634 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 455 gcatggcccagcggccgtggatgagctcgcactcgcggaac 415
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 494 bits (249), Expect = e-136 Identities = 327/353 (92%) Strand = Plus / Plus Query: 176 gaaggtgtcgaagatggtggtgtgcagcgggtcgctgaggtgggtggcccagttgttgag 235 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 22263067 gaaggtgtcgaagatggtggtgtggagcgggtcgctgaggtgggtggcccagttgttgag 22263126 Query: 236 cggacccttgccggtggcggcggcctgcacggcgaagccgaggaaggcgaccatggcgag 295 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22263127 gggccccttgccggtggcggcggcctgcacggcgaagccgaggaaggcgaccatggcgag 22263186 Query: 296 gcgggcgtgcttgatctccgccagctgcagagtctccttcttctccgggtccgccgcgag 355 |||||||||||||||||||||||||||||| |||||||||||||||||||| ||| | Sbjct: 22263187 gcgggcgtgcttgatctccgccagctgcagccgctccttcttctccgggtccgacgccaa 22263246 Query: 356 tcccagcgggtcgaagtaggagcctccggggtagagcctcctctccgggtccagctccgc 415 || ||||||||||||||||| || || ||||| |||||| ||||||||||||||||||| Sbjct: 22263247 cccgagcgggtcgaagtaggacccccccgggtacagcctcttctccgggtccagctccgc 22263306 Query: 416 gttgcgttggaactcgatgtacccgatcaccagcacctcgatccagatgagcgtggtgat 475 |||||| |||||||||||||| ||||| || ||||||||||||||||| ||||| | ||| Sbjct: 22263307 gttgcgctggaactcgatgtagccgatgacgagcacctcgatccagatcagcgtcgagat 22263366 Query: 476 cgtgaacggcagcggctgacccaggtacgacgacccgtccaccagctccacct 528 || ||||||||||||||| ||||||||||||||||| |||||||||||||||| Sbjct: 22263367 cgagaacggcagcggctgccccaggtacgacgacccatccaccagctccacct 22263419 Score = 170 bits (86), Expect = 4e-39 Identities = 99/102 (97%), Gaps = 1/102 (0%) Strand = Plus / Plus Query: 532 ccggcgtcctgccaggtgacgccggtgagccactcgacggtgagggcgcccgagggtggc 591 |||||||| ||||||||||||||||||||||||||||||| ||||||||| ||||||||| Sbjct: 22263794 ccggcgtcttgccaggtgacgccggtgagccactcgacggagagggcgcc-gagggtggc 22263852 Query: 592 gagcatggcccagcggccgtggatgagctcgcactcgcggaa 633 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 22263853 gagcatggcccagcggccgtggatgagctcgcactcgcggaa 22263894 Score = 40.1 bits (20), Expect = 8.6 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 95 ttcgttacacggacgcgcgttcgtccat 122 ||||||||||||||| |||||||||||| Sbjct: 7208546 ttcgttacacggacg-gcgttcgtccat 7208572
>dbj|AP005195.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0567H04 Length = 181420 Score = 494 bits (249), Expect = e-136 Identities = 327/353 (92%) Strand = Plus / Plus Query: 176 gaaggtgtcgaagatggtggtgtgcagcgggtcgctgaggtgggtggcccagttgttgag 235 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 68313 gaaggtgtcgaagatggtggtgtggagcgggtcgctgaggtgggtggcccagttgttgag 68372 Query: 236 cggacccttgccggtggcggcggcctgcacggcgaagccgaggaaggcgaccatggcgag 295 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 68373 gggccccttgccggtggcggcggcctgcacggcgaagccgaggaaggcgaccatggcgag 68432 Query: 296 gcgggcgtgcttgatctccgccagctgcagagtctccttcttctccgggtccgccgcgag 355 |||||||||||||||||||||||||||||| |||||||||||||||||||| ||| | Sbjct: 68433 gcgggcgtgcttgatctccgccagctgcagccgctccttcttctccgggtccgacgccaa 68492 Query: 356 tcccagcgggtcgaagtaggagcctccggggtagagcctcctctccgggtccagctccgc 415 || ||||||||||||||||| || || ||||| |||||| ||||||||||||||||||| Sbjct: 68493 cccgagcgggtcgaagtaggacccccccgggtacagcctcttctccgggtccagctccgc 68552 Query: 416 gttgcgttggaactcgatgtacccgatcaccagcacctcgatccagatgagcgtggtgat 475 |||||| |||||||||||||| ||||| || ||||||||||||||||| ||||| | ||| Sbjct: 68553 gttgcgctggaactcgatgtagccgatgacgagcacctcgatccagatcagcgtcgagat 68612 Query: 476 cgtgaacggcagcggctgacccaggtacgacgacccgtccaccagctccacct 528 || ||||||||||||||| ||||||||||||||||| |||||||||||||||| Sbjct: 68613 cgagaacggcagcggctgccccaggtacgacgacccatccaccagctccacct 68665 Score = 170 bits (86), Expect = 4e-39 Identities = 99/102 (97%), Gaps = 1/102 (0%) Strand = Plus / Plus Query: 532 ccggcgtcctgccaggtgacgccggtgagccactcgacggtgagggcgcccgagggtggc 591 |||||||| ||||||||||||||||||||||||||||||| ||||||||| ||||||||| Sbjct: 69040 ccggcgtcttgccaggtgacgccggtgagccactcgacggagagggcgcc-gagggtggc 69098 Query: 592 gagcatggcccagcggccgtggatgagctcgcactcgcggaa 633 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 69099 gagcatggcccagcggccgtggatgagctcgcactcgcggaa 69140
>gb|AF139466.2|AF139466 Vigna radiata chlorophyll a/b binding protein CP29 (CipCp29) mRNA, complete cds; nuclear gene for chloroplast product Length = 1118 Score = 204 bits (103), Expect = 3e-49 Identities = 372/459 (81%), Gaps = 2/459 (0%) Strand = Plus / Minus Query: 176 gaaggtgtcgaagatggtggtgtgcagcgggtcgctgaggtgggtggcccagttgttgag 235 ||||||||| | |||||| ||||| || ||||| || | ||||||||||||||||||||| Sbjct: 918 gaaggtgtcaatgatggttgtgtgaagtgggtcactcaagtgggtggcccagttgttgag 859 Query: 236 cggacccttgccggtggcggcggcctgcacggcgaagccgaggaaggcgaccatggcgag 295 || |||||||| ||||| || || || || || ||||| | |||| | |||||||| || Sbjct: 858 tgggcccttgccagtggcagcagcttggactgcaaagcccaagaagcccaccatggcaag 799 Query: 296 gcgggcgtgcttgatctccgccagctgcagagtctccttcttctccgggtccgccgcgag 355 || |||||||||||||| |||| || ||||| | |||||||| ||||| | || | Sbjct: 798 acgtgcgtgcttgatctctgccaattgaagagtggctttcttctctgggtctgaggctaa 739 Query: 356 tcccagcgggtcgaagtaggagcctccggggtagagcctcctctccgggtccagctccgc 415 || || |||||||||||| || || ||||| || ||| | || ||||| ||||| || Sbjct: 738 accaagagggtcgaagtagctcccacctgggtacagtctcttttctgggtcaagctctgc 679 Query: 416 gttgcgttggaactcgatgtacccgatcaccagcacctcgatccagatgagcgtggtgat 475 || | |||||||| |||||||| || ||||| ||||||||||| || | |||||||| Sbjct: 678 attcctctggaactctatgtacccaattaccagaacctcgatccaaatcaatgtggtgat 619 Query: 476 cgtgaacggcagcggctgacccaggtacgacgacccgtccaccagctccaccttgcccgg 535 | ||| || || || || || ||||| || || || || || |||||||||||||| || Sbjct: 618 tgagaatggaagtggttgcccaaggtatgatgatccttctactagctccaccttgcc-gg 560 Query: 536 cgtcctgccaggtgacgccggtgagccactcgacggtgagggcgcccgagggtggcgagc 595 |||||||||| ||||| ||||||||||||||||||| |||||| || ||| ||||||||| Sbjct: 559 cgtcctgccacgtgacaccggtgagccactcgacggagagggctcc-gagcgtggcgagc 501 Query: 596 atggcccagcggccgtggatgagctcgcactcgcggaac 634 ||||||||||| || |||||||||||||||||||||||| Sbjct: 500 atggcccagcgtccatggatgagctcgcactcgcggaac 462
>ref|NM_120231.3| Arabidopsis thaliana chlorophyll binding AT5G01530 mRNA, complete cds Length = 1222 Score = 121 bits (61), Expect = 3e-24 Identities = 354/449 (78%), Gaps = 2/449 (0%) Strand = Plus / Minus Query: 176 gaaggtgtcgaagatggtggtgtgcagcgggtcgctgaggtgggtggcccagttgttgag 235 |||||| |||| |||||||||||| || || || |||||||| || ||||| |||||||| Sbjct: 1008 gaaggtatcgatgatggtggtgtggagtggatcactgaggtgagtagcccaattgttgag 949 Query: 236 cggacccttgccggtggcggcggcctgcacggcgaagccgaggaaggcgaccatggcgag 295 ||||| || || || || || || || || ||||| || | |||||||||||| || || Sbjct: 948 tggacctttacctgttgcagccgcttgaaccgcgaatcccaagaaggcgaccatcgcaag 889 Query: 296 gcgggcgtgcttgatctccgccagctgcagagtctccttcttctccgggtccgccgcgag 355 || || ||||||||||| || | ||| || | ||||||||||||| ||||| | Sbjct: 888 acgtgcatgcttgatctcagctaactgaagttgagcagtcttctccgggtcagccgctaa 829 Query: 356 tcccagcgggtcgaagtaggagcctccggggtagagcctcctctccgggtccagctccgc 415 || |||||||| ||| | |||||||||||| | | | |||||| || ||||| || Sbjct: 828 acctagcgggtcaaagaacttgcctccggggtataaacgcttctccgaatcaagctcggc 769 Query: 416 gttgcgttggaactcgatgtacccgatcaccagcacctcgatccagatgagcgtggtgat 475 |||||| |||||||||||||| |||||||| | |||||||||||| || | || | ||| Sbjct: 768 gttgcgctggaactcgatgtagccgatcactaacacctcgatccatatcaatgtcgagat 709 Query: 476 cgtgaacggcagcggctgacccaggtacgacgacccgtccaccagctccaccttgcccgg 535 || ||| || | ||||| |||| ||| ||||| || || || |||||||||||||| | Sbjct: 708 cgagaaaggtaatggctgccccaagtaggacgatccatctacaagctccaccttgccag- 650 Query: 536 cgtcctgccaggtgacgccggtgagccactcgacggtgagggcgcccgagggtggcgagc 595 |||| ||||| || |||||||| ||||| ||||||| ||| ||||| ||| || |||||| Sbjct: 649 cgtcttgccatgtaacgccggtaagccattcgacggagagagcgcc-gagagtagcgagc 591 Query: 596 atggcccagcggccgtggatgagctcgca 624 || ||||| || ||||||||||| ||||| Sbjct: 590 atcgcccaccgtccgtggatgagttcgca 562
>gb|AY133566.1| Arabidopsis thaliana At5g01530/F7A7_50 mRNA, complete cds Length = 873 Score = 121 bits (61), Expect = 3e-24 Identities = 354/449 (78%), Gaps = 2/449 (0%) Strand = Plus / Minus Query: 176 gaaggtgtcgaagatggtggtgtgcagcgggtcgctgaggtgggtggcccagttgttgag 235 |||||| |||| |||||||||||| || || || |||||||| || ||||| |||||||| Sbjct: 861 gaaggtatcgatgatggtggtgtggagtggatcactgaggtgagtagcccaattgttgag 802 Query: 236 cggacccttgccggtggcggcggcctgcacggcgaagccgaggaaggcgaccatggcgag 295 ||||| || || || || || || || || ||||| || | |||||||||||| || || Sbjct: 801 tggacctttacctgttgcagccgcttgaaccgcgaatcccaagaaggcgaccatcgcaag 742 Query: 296 gcgggcgtgcttgatctccgccagctgcagagtctccttcttctccgggtccgccgcgag 355 || || ||||||||||| || | ||| || | ||||||||||||| ||||| | Sbjct: 741 acgtgcatgcttgatctcagctaactgaagttgagcagtcttctccgggtcagccgctaa 682 Query: 356 tcccagcgggtcgaagtaggagcctccggggtagagcctcctctccgggtccagctccgc 415 || |||||||| ||| | |||||||||||| | | | |||||| || ||||| || Sbjct: 681 acctagcgggtcaaagaacttgcctccggggtataaacgcttctccgaatcaagctcggc 622 Query: 416 gttgcgttggaactcgatgtacccgatcaccagcacctcgatccagatgagcgtggtgat 475 |||||| |||||||||||||| |||||||| | |||||||||||| || | || | ||| Sbjct: 621 gttgcgctggaactcgatgtagccgatcactaacacctcgatccatatcaatgtcgagat 562 Query: 476 cgtgaacggcagcggctgacccaggtacgacgacccgtccaccagctccaccttgcccgg 535 || ||| || | ||||| |||| ||| ||||| || || || |||||||||||||| | Sbjct: 561 cgagaaaggtaatggctgccccaagtaggacgatccatctacaagctccaccttgccag- 503 Query: 536 cgtcctgccaggtgacgccggtgagccactcgacggtgagggcgcccgagggtggcgagc 595 |||| ||||| || |||||||| ||||| ||||||| ||| ||||| ||| || |||||| Sbjct: 502 cgtcttgccatgtaacgccggtaagccattcgacggagagagcgcc-gagagtagcgagc 444 Query: 596 atggcccagcggccgtggatgagctcgca 624 || ||||| || ||||||||||| ||||| Sbjct: 443 atcgcccaccgtccgtggatgagttcgca 415
>gb|AY092980.1| Arabidopsis thaliana chlorophyll a/b-binding protein CP29 (At5g01530) mRNA, complete cds Length = 1094 Score = 121 bits (61), Expect = 3e-24 Identities = 354/449 (78%), Gaps = 2/449 (0%) Strand = Plus / Minus Query: 176 gaaggtgtcgaagatggtggtgtgcagcgggtcgctgaggtgggtggcccagttgttgag 235 |||||| |||| |||||||||||| || || || |||||||| || ||||| |||||||| Sbjct: 896 gaaggtatcgatgatggtggtgtggagtggatcactgaggtgagtagcccaattgttgag 837 Query: 236 cggacccttgccggtggcggcggcctgcacggcgaagccgaggaaggcgaccatggcgag 295 ||||| || || || || || || || || ||||| || | |||||||||||| || || Sbjct: 836 tggacctttacctgttgcagccgcttgaaccgcgaatcccaagaaggcgaccatcgcaag 777 Query: 296 gcgggcgtgcttgatctccgccagctgcagagtctccttcttctccgggtccgccgcgag 355 || || ||||||||||| || | ||| || | ||||||||||||| ||||| | Sbjct: 776 acgtgcatgcttgatctcagctaactgaagttgagcagtcttctccgggtcagccgctaa 717 Query: 356 tcccagcgggtcgaagtaggagcctccggggtagagcctcctctccgggtccagctccgc 415 || |||||||| ||| | |||||||||||| | | | |||||| || ||||| || Sbjct: 716 acctagcgggtcaaagaacttgcctccggggtataaacgcttctccgaatcaagctcggc 657 Query: 416 gttgcgttggaactcgatgtacccgatcaccagcacctcgatccagatgagcgtggtgat 475 |||||| |||||||||||||| |||||||| | |||||||||||| || | || | ||| Sbjct: 656 gttgcgctggaactcgatgtagccgatcactaacacctcgatccatatcaatgtcgagat 597 Query: 476 cgtgaacggcagcggctgacccaggtacgacgacccgtccaccagctccaccttgcccgg 535 || ||| || | ||||| |||| ||| ||||| || || || |||||||||||||| | Sbjct: 596 cgagaaaggtaatggctgccccaagtaggacgatccatctacaagctccaccttgccag- 538 Query: 536 cgtcctgccaggtgacgccggtgagccactcgacggtgagggcgcccgagggtggcgagc 595 |||| ||||| || |||||||| ||||| ||||||| ||| ||||| ||| || |||||| Sbjct: 537 cgtcttgccatgtaacgccggtaagccattcgacggagagagcgcc-gagagtagcgagc 479 Query: 596 atggcccagcggccgtggatgagctcgca 624 || ||||| || ||||||||||| ||||| Sbjct: 478 atcgcccaccgtccgtggatgagttcgca 450
>gb|AY081680.1| Arabidopsis thaliana chlorophyll a/b-binding protein CP29 (At5g01530) mRNA, complete cds Length = 947 Score = 121 bits (61), Expect = 3e-24 Identities = 354/449 (78%), Gaps = 2/449 (0%) Strand = Plus / Minus Query: 176 gaaggtgtcgaagatggtggtgtgcagcgggtcgctgaggtgggtggcccagttgttgag 235 |||||| |||| |||||||||||| || || || |||||||| || ||||| |||||||| Sbjct: 861 gaaggtatcgatgatggtggtgtggagtggatcactgaggtgagtagcccaattgttgag 802 Query: 236 cggacccttgccggtggcggcggcctgcacggcgaagccgaggaaggcgaccatggcgag 295 ||||| || || || || || || || || ||||| || | |||||||||||| || || Sbjct: 801 tggacctttacctgttgcagccgcttgaaccgcgaatcccaagaaggcgaccatcgcaag 742 Query: 296 gcgggcgtgcttgatctccgccagctgcagagtctccttcttctccgggtccgccgcgag 355 || || ||||||||||| || | ||| || | ||||||||||||| ||||| | Sbjct: 741 acgtgcatgcttgatctcagctaactgaagttgagcagtcttctccgggtcagccgctaa 682 Query: 356 tcccagcgggtcgaagtaggagcctccggggtagagcctcctctccgggtccagctccgc 415 || |||||||| ||| | |||||||||||| | | | |||||| || ||||| || Sbjct: 681 acctagcgggtcaaagaacttgcctccggggtataaacgcttctccgaatcaagctcggc 622 Query: 416 gttgcgttggaactcgatgtacccgatcaccagcacctcgatccagatgagcgtggtgat 475 |||||| |||||||||||||| |||||||| | |||||||||||| || | || | ||| Sbjct: 621 gttgcgctggaactcgatgtagccgatcactaacacctcgatccatatcaatgtcgagat 562 Query: 476 cgtgaacggcagcggctgacccaggtacgacgacccgtccaccagctccaccttgcccgg 535 || ||| || | ||||| |||| ||| ||||| || || || |||||||||||||| | Sbjct: 561 cgagaaaggtaatggctgccccaagtaggacgatccatctacaagctccaccttgccag- 503 Query: 536 cgtcctgccaggtgacgccggtgagccactcgacggtgagggcgcccgagggtggcgagc 595 |||| ||||| || |||||||| ||||| ||||||| ||| ||||| ||| || |||||| Sbjct: 502 cgtcttgccatgtaacgccggtaagccattcgacggagagagcgcc-gagagtagcgagc 444 Query: 596 atggcccagcggccgtggatgagctcgca 624 || ||||| || ||||||||||| ||||| Sbjct: 443 atcgcccaccgtccgtggatgagttcgca 415
>gb|AY059861.1| Arabidopsis thaliana chlorophyll a/b-binding protein CP29 (At5g01530; F7A7_50) mRNA, complete cds Length = 1023 Score = 121 bits (61), Expect = 3e-24 Identities = 354/449 (78%), Gaps = 2/449 (0%) Strand = Plus / Minus Query: 176 gaaggtgtcgaagatggtggtgtgcagcgggtcgctgaggtgggtggcccagttgttgag 235 |||||| |||| |||||||||||| || || || |||||||| || ||||| |||||||| Sbjct: 897 gaaggtatcgatgatggtggtgtggagtggatcactgaggtgagtagcccaattgttgag 838 Query: 236 cggacccttgccggtggcggcggcctgcacggcgaagccgaggaaggcgaccatggcgag 295 ||||| || || || || || || || || ||||| || | |||||||||||| || || Sbjct: 837 tggacctttacctgttgcagccgcttgaaccgcgaatcccaagaaggcgaccatcgcaag 778 Query: 296 gcgggcgtgcttgatctccgccagctgcagagtctccttcttctccgggtccgccgcgag 355 || || ||||||||||| || | ||| || | ||||||||||||| ||||| | Sbjct: 777 acgtgcatgcttgatctcagctaactgaagttgagcagtcttctccgggtcagccgctaa 718 Query: 356 tcccagcgggtcgaagtaggagcctccggggtagagcctcctctccgggtccagctccgc 415 || |||||||| ||| | |||||||||||| | | | |||||| || ||||| || Sbjct: 717 acctagcgggtcaaagaacttgcctccggggtataaacgcttctccgaatcaagctcggc 658 Query: 416 gttgcgttggaactcgatgtacccgatcaccagcacctcgatccagatgagcgtggtgat 475 |||||| |||||||||||||| |||||||| | |||||||||||| || | || | ||| Sbjct: 657 gttgcgctggaactcgatgtagccgatcactaacacctcgatccatatcaatgtcgagat 598 Query: 476 cgtgaacggcagcggctgacccaggtacgacgacccgtccaccagctccaccttgcccgg 535 || ||| || | ||||| |||| ||| ||||| || || || |||||||||||||| | Sbjct: 597 cgagaaaggtaatggctgccccaagtaggacgatccatctacaagctccaccttgccag- 539 Query: 536 cgtcctgccaggtgacgccggtgagccactcgacggtgagggcgcccgagggtggcgagc 595 |||| ||||| || |||||||| ||||| ||||||| ||| ||||| ||| || |||||| Sbjct: 538 cgtcttgccatgtaacgccggtaagccattcgacggagagagcgcc-gagagtagcgagc 480 Query: 596 atggcccagcggccgtggatgagctcgca 624 || ||||| || ||||||||||| ||||| Sbjct: 479 atcgcccaccgtccgtggatgagttcgca 451
>gb|AY057641.1| Arabidopsis thaliana AT5g01530/F7A7_50 mRNA, complete cds Length = 1113 Score = 121 bits (61), Expect = 3e-24 Identities = 354/449 (78%), Gaps = 2/449 (0%) Strand = Plus / Minus Query: 176 gaaggtgtcgaagatggtggtgtgcagcgggtcgctgaggtgggtggcccagttgttgag 235 |||||| |||| |||||||||||| || || || |||||||| || ||||| |||||||| Sbjct: 896 gaaggtatcgatgatggtggtgtggagtggatcactgaggtgagtagcccaattgttgag 837 Query: 236 cggacccttgccggtggcggcggcctgcacggcgaagccgaggaaggcgaccatggcgag 295 ||||| || || || || || || || || ||||| || | |||||||||||| || || Sbjct: 836 tggacctttacctgttgcagccgcttgaaccgcgaatcccaagaaggcgaccatcgcaag 777 Query: 296 gcgggcgtgcttgatctccgccagctgcagagtctccttcttctccgggtccgccgcgag 355 || || ||||||||||| || | ||| || | ||||||||||||| ||||| | Sbjct: 776 acgtgcatgcttgatctcagctaactgaagttgagcagtcttctccgggtcagccgctaa 717 Query: 356 tcccagcgggtcgaagtaggagcctccggggtagagcctcctctccgggtccagctccgc 415 || |||||||| ||| | |||||||||||| | | | |||||| || ||||| || Sbjct: 716 acctagcgggtcaaagaacttgcctccggggtataaacgcttctccgaatcaagctcggc 657 Query: 416 gttgcgttggaactcgatgtacccgatcaccagcacctcgatccagatgagcgtggtgat 475 |||||| |||||||||||||| |||||||| | |||||||||||| || | || | ||| Sbjct: 656 gttgcgctggaactcgatgtagccgatcactaacacctcgatccatatcaatgtcgagat 597 Query: 476 cgtgaacggcagcggctgacccaggtacgacgacccgtccaccagctccaccttgcccgg 535 || ||| || | ||||| |||| ||| ||||| || || || |||||||||||||| | Sbjct: 596 cgagaaaggtaatggctgccccaagtaggacgatccatctacaagctccaccttgccag- 538 Query: 536 cgtcctgccaggtgacgccggtgagccactcgacggtgagggcgcccgagggtggcgagc 595 |||| ||||| || |||||||| ||||| ||||||| ||| ||||| ||| || |||||| Sbjct: 537 cgtcttgccatgtaacgccggtaagccattcgacggagagagcgcc-gagagtagcgagc 479 Query: 596 atggcccagcggccgtggatgagctcgca 624 || ||||| || ||||||||||| ||||| Sbjct: 478 atcgcccaccgtccgtggatgagttcgca 450
>gb|AY048300.1| Arabidopsis thaliana AT5g01530/F7A7_50 mRNA, complete cds Length = 1074 Score = 121 bits (61), Expect = 3e-24 Identities = 354/449 (78%), Gaps = 2/449 (0%) Strand = Plus / Minus Query: 176 gaaggtgtcgaagatggtggtgtgcagcgggtcgctgaggtgggtggcccagttgttgag 235 |||||| |||| |||||||||||| || || || |||||||| || ||||| |||||||| Sbjct: 898 gaaggtatcgatgatggtggtgtggagtggatcactgaggtgagtagcccaattgttgag 839 Query: 236 cggacccttgccggtggcggcggcctgcacggcgaagccgaggaaggcgaccatggcgag 295 ||||| || || || || || || || || ||||| || | |||||||||||| || || Sbjct: 838 tggacctttacctgttgcagccgcttgaaccgcgaatcccaagaaggcgaccatcgcaag 779 Query: 296 gcgggcgtgcttgatctccgccagctgcagagtctccttcttctccgggtccgccgcgag 355 || || ||||||||||| || | ||| || | ||||||||||||| ||||| | Sbjct: 778 acgtgcatgcttgatctcagctaactgaagttgagcagtcttctccgggtcagccgctaa 719 Query: 356 tcccagcgggtcgaagtaggagcctccggggtagagcctcctctccgggtccagctccgc 415 || |||||||| ||| | |||||||||||| | | | |||||| || ||||| || Sbjct: 718 acctagcgggtcaaagaacttgcctccggggtataaacgcttctccgaatcaagctcggc 659 Query: 416 gttgcgttggaactcgatgtacccgatcaccagcacctcgatccagatgagcgtggtgat 475 |||||| |||||||||||||| |||||||| | |||||||||||| || | || | ||| Sbjct: 658 gttgcgctggaactcgatgtagccgatcactaacacctcgatccatatcaatgtcgagat 599 Query: 476 cgtgaacggcagcggctgacccaggtacgacgacccgtccaccagctccaccttgcccgg 535 || ||| || | ||||| |||| ||| ||||| || || || |||||||||||||| | Sbjct: 598 cgagaaaggtaatggctgccccaagtaggacgatccatctacaagctccaccttgccag- 540 Query: 536 cgtcctgccaggtgacgccggtgagccactcgacggtgagggcgcccgagggtggcgagc 595 |||| ||||| || |||||||| ||||| ||||||| ||| ||||| ||| || |||||| Sbjct: 539 cgtcttgccatgtaacgccggtaagccattcgacggagagagcgcc-gagagtagcgagc 481 Query: 596 atggcccagcggccgtggatgagctcgca 624 || ||||| || ||||||||||| ||||| Sbjct: 480 atcgcccaccgtccgtggatgagttcgca 452
>emb|BX833597.1|CNS0A1R6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL65ZB03 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 970 Score = 121 bits (61), Expect = 3e-24 Identities = 354/449 (78%), Gaps = 2/449 (0%) Strand = Plus / Minus Query: 176 gaaggtgtcgaagatggtggtgtgcagcgggtcgctgaggtgggtggcccagttgttgag 235 |||||| |||| |||||||||||| || || || |||||||| || ||||| |||||||| Sbjct: 882 gaaggtatcgatgatggtggtgtggagtggatcactgaggtgagtagcccaattgttgag 823 Query: 236 cggacccttgccggtggcggcggcctgcacggcgaagccgaggaaggcgaccatggcgag 295 ||||| || || || || || || || || ||||| || | |||||||||||| || || Sbjct: 822 tggacctttacctgttgcagccgcttgaaccgcgaatcccaagaaggcgaccatcgcaag 763 Query: 296 gcgggcgtgcttgatctccgccagctgcagagtctccttcttctccgggtccgccgcgag 355 || || ||||||||||| || | ||| || | ||||||||||||| ||||| | Sbjct: 762 acgtgcatgcttgatctcagctaactgaagttgagcagtcttctccgggtcagccgctaa 703 Query: 356 tcccagcgggtcgaagtaggagcctccggggtagagcctcctctccgggtccagctccgc 415 || |||||||| ||| | |||||||||||| | | | |||||| || ||||| || Sbjct: 702 acctagcgggtcaaagaacttgcctccggggtataaacgcttctccgaatcaagctcggc 643 Query: 416 gttgcgttggaactcgatgtacccgatcaccagcacctcgatccagatgagcgtggtgat 475 |||||| |||||||||||||| |||||||| | |||||||||||| || | || | ||| Sbjct: 642 gttgcgctggaactcgatgtagccgatcactaacacctcgatccatatcaatgtcgagat 583 Query: 476 cgtgaacggcagcggctgacccaggtacgacgacccgtccaccagctccaccttgcccgg 535 || ||| || | ||||| |||| ||| ||||| || || || |||||||||||||| | Sbjct: 582 cgagaaaggtaatggctgccccaagtaggacgatccatctacaagctccaccttgccag- 524 Query: 536 cgtcctgccaggtgacgccggtgagccactcgacggtgagggcgcccgagggtggcgagc 595 |||| ||||| || |||||||| ||||| ||||||| ||| ||||| ||| || |||||| Sbjct: 523 cgtcttgccatgtaacgccggtaagccattcgacggagagagcgcc-gagagtagcgagc 465 Query: 596 atggcccagcggccgtggatgagctcgca 624 || ||||| || ||||||||||| ||||| Sbjct: 464 atcgcccaccgtccgtggatgagttcgca 436
>emb|BX831442.1|CNS0A1WM Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS90ZH01 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 954 Score = 121 bits (61), Expect = 3e-24 Identities = 354/449 (78%), Gaps = 2/449 (0%) Strand = Plus / Minus Query: 176 gaaggtgtcgaagatggtggtgtgcagcgggtcgctgaggtgggtggcccagttgttgag 235 |||||| |||| |||||||||||| || || || |||||||| || ||||| |||||||| Sbjct: 866 gaaggtatcgatgatggtggtgtggagtggatcactgaggtgagtagcccaattgttgag 807 Query: 236 cggacccttgccggtggcggcggcctgcacggcgaagccgaggaaggcgaccatggcgag 295 ||||| || || || || || || || || ||||| || | |||||||||||| || || Sbjct: 806 tggacctttacctgttgcagccgcttgaaccgcgaatcccaagaaggcgaccatcgcaag 747 Query: 296 gcgggcgtgcttgatctccgccagctgcagagtctccttcttctccgggtccgccgcgag 355 || || ||||||||||| || | ||| || | ||||||||||||| ||||| | Sbjct: 746 acgtgcatgcttgatctcagctaactgaagttgagcagtcttctccgggtcagccgctaa 687 Query: 356 tcccagcgggtcgaagtaggagcctccggggtagagcctcctctccgggtccagctccgc 415 || |||||||| ||| | |||||||||||| | | | |||||| || ||||| || Sbjct: 686 acctagcgggtcaaagaacttgcctccggggtataaacgcttctccgaatcaagctcggc 627 Query: 416 gttgcgttggaactcgatgtacccgatcaccagcacctcgatccagatgagcgtggtgat 475 |||||| |||||||||||||| |||||||| | |||||||||||| || | || | ||| Sbjct: 626 gttgcgctggaactcgatgtagccgatcactaacacctcgatccatatcaatgtcgagat 567 Query: 476 cgtgaacggcagcggctgacccaggtacgacgacccgtccaccagctccaccttgcccgg 535 || ||| || | ||||| |||| ||| ||||| || || || |||||||||||||| | Sbjct: 566 cgagaaaggtaatggctgccccaagtaggacgatccatctacaagctccaccttgccag- 508 Query: 536 cgtcctgccaggtgacgccggtgagccactcgacggtgagggcgcccgagggtggcgagc 595 |||| ||||| || |||||||| ||||| ||||||| ||| ||||| ||| || |||||| Sbjct: 507 cgtcttgccatgtaacgccggtaagccattcgacggagagagcgcc-gagagtagcgagc 449 Query: 596 atggcccagcggccgtggatgagctcgca 624 || ||||| || ||||||||||| ||||| Sbjct: 448 atcgcccaccgtccgtggatgagttcgca 420
>emb|BX830127.1|CNS0A1XL Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB61ZD03 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 963 Score = 121 bits (61), Expect = 3e-24 Identities = 354/449 (78%), Gaps = 2/449 (0%) Strand = Plus / Minus Query: 176 gaaggtgtcgaagatggtggtgtgcagcgggtcgctgaggtgggtggcccagttgttgag 235 |||||| |||| |||||||||||| || || || |||||||| || ||||| |||||||| Sbjct: 859 gaaggtatcgatgatggtggtgtggagtggatcactgaggtgagtagcccaattgttgag 800 Query: 236 cggacccttgccggtggcggcggcctgcacggcgaagccgaggaaggcgaccatggcgag 295 ||||| || || || || || || || || ||||| || | |||||||||||| || || Sbjct: 799 tggacctttacctgttgcagccgcttgaaccgcgaatcccaagaaggcgaccatcgcaag 740 Query: 296 gcgggcgtgcttgatctccgccagctgcagagtctccttcttctccgggtccgccgcgag 355 || || ||||||||||| || | ||| || | ||||||||||||| ||||| | Sbjct: 739 acgtgcatgcttgatctcagctaactgaagttgagcagtcttctccgggtcagccgctaa 680 Query: 356 tcccagcgggtcgaagtaggagcctccggggtagagcctcctctccgggtccagctccgc 415 || |||||||| ||| | |||||||||||| | | | |||||| || ||||| || Sbjct: 679 acctagcgggtcaaagaacttgcctccggggtataaacgcttctccgaatcaagctcggc 620 Query: 416 gttgcgttggaactcgatgtacccgatcaccagcacctcgatccagatgagcgtggtgat 475 |||||| |||||||||||||| |||||||| | |||||||||||| || | || | ||| Sbjct: 619 gttgcgctggaactcgatgtagccgatcactaacacctcgatccatatcaatgtcgagat 560 Query: 476 cgtgaacggcagcggctgacccaggtacgacgacccgtccaccagctccaccttgcccgg 535 || ||| || | ||||| |||| ||| ||||| || || || |||||||||||||| | Sbjct: 559 cgagaaaggtaatggctgccccaagtaggacgatccatctacaagctccaccttgccag- 501 Query: 536 cgtcctgccaggtgacgccggtgagccactcgacggtgagggcgcccgagggtggcgagc 595 |||| ||||| || |||||||| ||||| ||||||| ||| ||||| ||| || |||||| Sbjct: 500 cgtcttgccatgtaacgccggtaagccattcgacggagagagcgcc-gagagtagcgagc 442 Query: 596 atggcccagcggccgtggatgagctcgca 624 || ||||| || ||||||||||| ||||| Sbjct: 441 atcgcccaccgtccgtggatgagttcgca 413
>emb|BX831299.1|CNS09ZIA Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS77ZA02 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 946 Score = 121 bits (61), Expect = 3e-24 Identities = 354/449 (78%), Gaps = 2/449 (0%) Strand = Plus / Minus Query: 176 gaaggtgtcgaagatggtggtgtgcagcgggtcgctgaggtgggtggcccagttgttgag 235 |||||| |||| |||||||||||| || || || |||||||| || ||||| |||||||| Sbjct: 883 gaaggtatcgatgatggtggtgtggagtggatcactgaggtgagtagcccaattgttgag 824 Query: 236 cggacccttgccggtggcggcggcctgcacggcgaagccgaggaaggcgaccatggcgag 295 ||||| || || || || || || || || ||||| || | |||||||||||| || || Sbjct: 823 tggacctttacctgttgcagccgcttgaaccgcgaatcccaagaaggcgaccatcgcaag 764 Query: 296 gcgggcgtgcttgatctccgccagctgcagagtctccttcttctccgggtccgccgcgag 355 || || ||||||||||| || | ||| || | ||||||||||||| ||||| | Sbjct: 763 acgtgcatgcttgatctcagctaactgaagttgagcagtcttctccgggtcagccgctaa 704 Query: 356 tcccagcgggtcgaagtaggagcctccggggtagagcctcctctccgggtccagctccgc 415 || |||||||| ||| | |||||||||||| | | | |||||| || ||||| || Sbjct: 703 acctagcgggtcaaagaacttgcctccggggtataaacgcttctccgaatcaagctcggc 644 Query: 416 gttgcgttggaactcgatgtacccgatcaccagcacctcgatccagatgagcgtggtgat 475 |||||| |||||||||||||| |||||||| | |||||||||||| || | || | ||| Sbjct: 643 gttgcgctggaactcgatgtagccgatcactaacacctcgatccatatcaatgtcgagat 584 Query: 476 cgtgaacggcagcggctgacccaggtacgacgacccgtccaccagctccaccttgcccgg 535 || ||| || | ||||| |||| ||| ||||| || || || |||||||||||||| | Sbjct: 583 cgagaaaggtaatggctgccccaagtaggacgatccatctacaagctccaccttgccag- 525 Query: 536 cgtcctgccaggtgacgccggtgagccactcgacggtgagggcgcccgagggtggcgagc 595 |||| ||||| || |||||||| ||||| ||||||| ||| ||||| ||| || |||||| Sbjct: 524 cgtcttgccatgtaacgccggtaagccattcgacggagagagcgcc-gagagtagcgagc 466 Query: 596 atggcccagcggccgtggatgagctcgca 624 || ||||| || ||||||||||| ||||| Sbjct: 465 atcgcccaccgtccgtggatgagttcgca 437
>emb|BX831064.1|CNS09ZJ3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS54ZH08 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1077 Score = 121 bits (61), Expect = 3e-24 Identities = 354/449 (78%), Gaps = 2/449 (0%) Strand = Plus / Minus Query: 176 gaaggtgtcgaagatggtggtgtgcagcgggtcgctgaggtgggtggcccagttgttgag 235 |||||| |||| |||||||||||| || || || |||||||| || ||||| |||||||| Sbjct: 882 gaaggtatcgatgatggtggtgtggagtggatcactgaggtgagtagcccaattgttgag 823 Query: 236 cggacccttgccggtggcggcggcctgcacggcgaagccgaggaaggcgaccatggcgag 295 ||||| || || || || || || || || ||||| || | |||||||||||| || || Sbjct: 822 tggacctttacctgttgcagccgcttgaaccgcgaatcccaagaaggcgaccatcgcaag 763 Query: 296 gcgggcgtgcttgatctccgccagctgcagagtctccttcttctccgggtccgccgcgag 355 || || ||||||||||| || | ||| || | ||||||||||||| ||||| | Sbjct: 762 acgtgcatgcttgatctcagctaactgaagttgagcagtcttctccgggtcagccgctaa 703 Query: 356 tcccagcgggtcgaagtaggagcctccggggtagagcctcctctccgggtccagctccgc 415 || |||||||| ||| | |||||||||||| | | | |||||| || ||||| || Sbjct: 702 acctagcgggtcaaagaacttgcctccggggtataaacgcttctccgaatcaagctcggc 643 Query: 416 gttgcgttggaactcgatgtacccgatcaccagcacctcgatccagatgagcgtggtgat 475 |||||| |||||||||||||| |||||||| | |||||||||||| || | || | ||| Sbjct: 642 gttgcgctggaactcgatgtagccgatcactaacacctcgatccatatcaatgtcgagat 583 Query: 476 cgtgaacggcagcggctgacccaggtacgacgacccgtccaccagctccaccttgcccgg 535 || ||| || | ||||| |||| ||| ||||| || || || |||||||||||||| | Sbjct: 582 cgagaaaggtaatggctgccccaagtaggacgatccatctacaagctccaccttgccag- 524 Query: 536 cgtcctgccaggtgacgccggtgagccactcgacggtgagggcgcccgagggtggcgagc 595 |||| ||||| || |||||||| ||||| ||||||| ||| ||||| ||| || |||||| Sbjct: 523 cgtcttgccatgtaacgccggtaagccattcgacggagagagcgcc-gagagtagcgagc 465 Query: 596 atggcccagcggccgtggatgagctcgca 624 || ||||| || ||||||||||| ||||| Sbjct: 464 atcgcccaccgtccgtggatgagttcgca 436
>emb|BX830573.1|CNS0A06T Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB90ZH03 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1043 Score = 113 bits (57), Expect = 7e-22 Identities = 353/449 (78%), Gaps = 2/449 (0%) Strand = Plus / Minus Query: 176 gaaggtgtcgaagatggtggtgtgcagcgggtcgctgaggtgggtggcccagttgttgag 235 |||||| |||| |||||||||||| || || || |||||||| || ||||| |||||||| Sbjct: 985 gaaggtatcgatgatggtggtgtggagtggatcactgaggtgagtagcccaattgttgag 926 Query: 236 cggacccttgccggtggcggcggcctgcacggcgaagccgaggaaggcgaccatggcgag 295 ||||| || || || || || || || || ||||| || | |||||||||||| || || Sbjct: 925 tggacctttacctgttgcagccgcttgaaccgcgaatcccaagaaggcgaccatcgcaag 866 Query: 296 gcgggcgtgcttgatctccgccagctgcagagtctccttcttctccgggtccgccgcgag 355 || || | ||||||||| || | ||| || | ||||||||||||| ||||| | Sbjct: 865 acgtgcattcttgatctcagctaactgaagttgagcagtcttctccgggtcagccgctaa 806 Query: 356 tcccagcgggtcgaagtaggagcctccggggtagagcctcctctccgggtccagctccgc 415 || |||||||| ||| | |||||||||||| | | | |||||| || ||||| || Sbjct: 805 acctagcgggtcaaagaacttgcctccggggtataaacgcttctccgaatcaagctcggc 746 Query: 416 gttgcgttggaactcgatgtacccgatcaccagcacctcgatccagatgagcgtggtgat 475 |||||| |||||||||||||| |||||||| | |||||||||||| || | || | ||| Sbjct: 745 gttgcgctggaactcgatgtagccgatcactaacacctcgatccatatcaatgtcgagat 686 Query: 476 cgtgaacggcagcggctgacccaggtacgacgacccgtccaccagctccaccttgcccgg 535 || ||| || | ||||| |||| ||| ||||| || || || |||||||||||||| | Sbjct: 685 cgagaaaggtaatggctgccccaagtaggacgatccatctacaagctccaccttgccag- 627 Query: 536 cgtcctgccaggtgacgccggtgagccactcgacggtgagggcgcccgagggtggcgagc 595 |||| ||||| || |||||||| ||||| ||||||| ||| ||||| ||| || |||||| Sbjct: 626 cgtcttgccatgtaacgccggtaagccattcgacggagagagcgcc-gagagtagcgagc 568 Query: 596 atggcccagcggccgtggatgagctcgca 624 || ||||| || ||||||||||| ||||| Sbjct: 567 atcgcccaccgtccgtggatgagttcgca 539
>emb|BX841630.1|CNS09YKO Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB55ZH10 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1015 Score = 113 bits (57), Expect = 7e-22 Identities = 353/449 (78%), Gaps = 2/449 (0%) Strand = Plus / Minus Query: 176 gaaggtgtcgaagatggtggtgtgcagcgggtcgctgaggtgggtggcccagttgttgag 235 |||||| |||| |||||||||||| || || || |||||||| | ||||| |||||||| Sbjct: 882 gaaggtatcgatgatggtggtgtggagtggatcactgaggtgaggagcccaattgttgag 823 Query: 236 cggacccttgccggtggcggcggcctgcacggcgaagccgaggaaggcgaccatggcgag 295 ||||| || || || || || || || || ||||| || | |||||||||||| || || Sbjct: 822 tggacctttacctgttgcagccgcttgaaccgcgaatcccaagaaggcgaccatcgcaag 763 Query: 296 gcgggcgtgcttgatctccgccagctgcagagtctccttcttctccgggtccgccgcgag 355 || || ||||||||||| || | ||| || | ||||||||||||| ||||| | Sbjct: 762 acgtgcatgcttgatctcagctaactgaagttgagcagtcttctccgggtcagccgctaa 703 Query: 356 tcccagcgggtcgaagtaggagcctccggggtagagcctcctctccgggtccagctccgc 415 || |||||||| ||| | |||||||||||| | | | |||||| || ||||| || Sbjct: 702 acctagcgggtcaaagaacttgcctccggggtataaacgcttctccgaatcaagctcggc 643 Query: 416 gttgcgttggaactcgatgtacccgatcaccagcacctcgatccagatgagcgtggtgat 475 |||||| |||||||||||||| |||||||| | |||||||||||| || | || | ||| Sbjct: 642 gttgcgctggaactcgatgtagccgatcactaacacctcgatccatattaatgtcgagat 583 Query: 476 cgtgaacggcagcggctgacccaggtacgacgacccgtccaccagctccaccttgcccgg 535 || ||| || | ||||| |||| ||| ||||| || || || |||||||||||||| | Sbjct: 582 cgagaaaggtaatggctgccccaagtaggacgatccatctacaagctccaccttgccag- 524 Query: 536 cgtcctgccaggtgacgccggtgagccactcgacggtgagggcgcccgagggtggcgagc 595 |||| ||||| || |||||||| ||||| ||||||| ||| ||||| ||| || |||||| Sbjct: 523 cgtcttgccatgtaacgccggtaagccattcgacggagagagcgcc-gagagtagcgagc 465 Query: 596 atggcccagcggccgtggatgagctcgca 624 || ||||| || ||||||||||| ||||| Sbjct: 464 atcgcccaccgtccgtggatgagttcgca 436
>gb|AY048262.1| Arabidopsis thaliana AT5g01530/F7A7_50 mRNA, complete cds Length = 995 Score = 109 bits (55), Expect = 1e-20 Identities = 234/291 (80%), Gaps = 2/291 (0%) Strand = Plus / Minus Query: 334 tcttctccgggtccgccgcgagtcccagcgggtcgaagtaggagcctccggggtagagcc 393 ||||||||||||| ||||| | || |||||||| ||| | |||||||||||| | | Sbjct: 733 tcttctccgggtcagccgctaaacctagcgggtcaaagaacttgcctccggggtataaac 674 Query: 394 tcctctccgggtccagctccgcgttgcgttggaactcgatgtacccgatcaccagcacct 453 | |||||| || ||||| |||||||| |||||||||||||| |||||||| | ||||| Sbjct: 673 gcttctccgaatcaagctcggcgttgcgctggaactcgatgtagccgatcactaacacct 614 Query: 454 cgatccagatgagcgtggtgatcgtgaacggcagcggctgacccaggtacgacgacccgt 513 ||||||| || | || | ||||| ||| || | ||||| |||| ||| ||||| || | Sbjct: 613 cgatccatatcaatgtcgagatcgagaaaggtaatggctgccccaagtaggacgatccat 554 Query: 514 ccaccagctccaccttgcccggcgtcctgccaggtgacgccggtgagccactcgacggtg 573 | || |||||||||||||| | |||| ||||| || |||||||| ||||| ||||||| | Sbjct: 553 ctacaagctccaccttgccag-cgtcttgccatgtaacgccggtaagccattcgacggag 495 Query: 574 agggcgcccgagggtggcgagcatggcccagcggccgtggatgagctcgca 624 || ||||| ||| || |||||||| ||||| || ||||||||||| ||||| Sbjct: 494 agagcgcc-gagagtagcgagcatcgcccaccgtccgtggatgagttcgca 445
>gb|BT000363.1| Arabidopsis thaliana chlorophyll a/b-binding protein CP29 (At5g01530) mRNA, complete cds Length = 966 Score = 105 bits (53), Expect = 2e-19 Identities = 178/217 (82%), Gaps = 2/217 (0%) Strand = Plus / Minus Query: 408 agctccgcgttgcgttggaactcgatgtacccgatcaccagcacctcgatccagatgagc 467 ||||| |||||||| |||||||||||||| |||||||| | |||||||||||| || | Sbjct: 629 agctcggcgttgcgctggaactcgatgtagccgatcactaacacctcgatccatatcaat 570 Query: 468 gtggtgatcgtgaacggcagcggctgacccaggtacgacgacccgtccaccagctccacc 527 || | ||||| ||| || | ||||| |||| ||| ||||| || || || ||||||||| Sbjct: 569 gtcgagatcgagaaaggtaatggctgccccaagtaggacgatccatctacaagctccacc 510 Query: 528 ttgcccggcgtcctgccaggtgacgccggtgagccactcgacggtgagggcgcccgaggg 587 ||||| | |||| ||||| || |||||||| ||||| ||||||| ||| ||||| ||| | Sbjct: 509 ttgccag-cgtcttgccatgtaacgccggtaagccattcgacggagagagcgcc-gagag 452 Query: 588 tggcgagcatggcccagcggccgtggatgagctcgca 624 | |||||||| ||||| || ||||||||||| ||||| Sbjct: 451 tagcgagcatcgcccaccgtccgtggatgagttcgca 415 Score = 60.0 bits (30), Expect = 9e-06 Identities = 111/138 (80%) Strand = Plus / Minus Query: 176 gaaggtgtcgaagatggtggtgtgcagcgggtcgctgaggtgggtggcccagttgttgag 235 |||||| |||| |||||||||||| || || || |||||||| || ||||| |||||||| Sbjct: 861 gaaggtatcgatgatggtggtgtggagtggatcactgaggtgagtagcccaattgttgag 802 Query: 236 cggacccttgccggtggcggcggcctgcacggcgaagccgaggaaggcgaccatggcgag 295 ||||| || || || || || || || || ||||| || | |||||||||||| || || Sbjct: 801 tggacctttacctgttgcagccgcttgaaccgcgaatcccaagaaggcgaccatcgcaag 742 Query: 296 gcgggcgtgcttgatctc 313 || || ||||||||||| Sbjct: 741 acgtgcatgcttgatctc 724
>gb|AF370474.1|AF370474 Arabidopsis thaliana chlorophyll a/b-binding protein CP29 (F7A7_50) mRNA, complete cds Length = 1064 Score = 105 bits (53), Expect = 2e-19 Identities = 178/217 (82%), Gaps = 2/217 (0%) Strand = Plus / Minus Query: 408 agctccgcgttgcgttggaactcgatgtacccgatcaccagcacctcgatccagatgagc 467 ||||| |||||||| |||||||||||||| |||||||| | |||||||||||| || | Sbjct: 689 agctcggcgttgcgctggaactcgatgtagccgatcactaacacctcgatccatatcaat 630 Query: 468 gtggtgatcgtgaacggcagcggctgacccaggtacgacgacccgtccaccagctccacc 527 || | ||||| ||| || | ||||| |||| ||| ||||| || || || ||||||||| Sbjct: 629 gtcgagatcgagaaaggtaatggctgccccaagtaggacgatccatctacaagctccacc 570 Query: 528 ttgcccggcgtcctgccaggtgacgccggtgagccactcgacggtgagggcgcccgaggg 587 ||||| | |||| ||||| || |||||||| ||||| ||||||| ||| ||||| ||| | Sbjct: 569 ttgccag-cgtcttgccatgtaacgccggtaagccattcgacggagagagcgcc-gagag 512 Query: 588 tggcgagcatggcccagcggccgtggatgagctcgca 624 | |||||||| ||||| || ||||||||||| ||||| Sbjct: 511 tagcgagcatcgcccaccgtccgtggatgagttcgca 475 Score = 60.0 bits (30), Expect = 9e-06 Identities = 111/138 (80%) Strand = Plus / Minus Query: 176 gaaggtgtcgaagatggtggtgtgcagcgggtcgctgaggtgggtggcccagttgttgag 235 |||||| |||| |||||||||||| || || || |||||||| || ||||| |||||||| Sbjct: 921 gaaggtatcgatgatggtggtgtggagtggatcactgaggtgagtagcccaattgttgag 862 Query: 236 cggacccttgccggtggcggcggcctgcacggcgaagccgaggaaggcgaccatggcgag 295 ||||| || || || || || || || || ||||| || | |||||||||||| || || Sbjct: 861 tggacctttacctgttgcagccgcttgaaccgcgaatcccaagaaggcgaccatcgcaag 802 Query: 296 gcgggcgtgcttgatctc 313 || || ||||||||||| Sbjct: 801 acgtgcatgcttgatctc 784
>emb|BX830905.1|CNS09ZE8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS38ZG11 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 941 Score = 105 bits (53), Expect = 2e-19 Identities = 178/217 (82%), Gaps = 2/217 (0%) Strand = Plus / Minus Query: 408 agctccgcgttgcgttggaactcgatgtacccgatcaccagcacctcgatccagatgagc 467 ||||| |||||||| |||||||||||||| |||||||| | |||||||||||| || | Sbjct: 650 agctcggcgttgcgctggaactcgatgtagccgatcactaacacctcgatccatatcaat 591 Query: 468 gtggtgatcgtgaacggcagcggctgacccaggtacgacgacccgtccaccagctccacc 527 || | ||||| ||| || | ||||| |||| ||| ||||| || || || ||||||||| Sbjct: 590 gtcgagatcgagaaaggtaatggctgccccaagtaggacgatccatctacaagctccacc 531 Query: 528 ttgcccggcgtcctgccaggtgacgccggtgagccactcgacggtgagggcgcccgaggg 587 ||||| | |||| ||||| || |||||||| ||||| ||||||| ||| ||||| ||| | Sbjct: 530 ttgccag-cgtcttgccatgtaacgccggtaagccattcgacggagagagcgcc-gagag 473 Query: 588 tggcgagcatggcccagcggccgtggatgagctcgca 624 | |||||||| ||||| || ||||||||||| ||||| Sbjct: 472 tagcgagcatcgcccaccgtccgtggatgagttcgca 436 Score = 60.0 bits (30), Expect = 9e-06 Identities = 111/138 (80%) Strand = Plus / Minus Query: 176 gaaggtgtcgaagatggtggtgtgcagcgggtcgctgaggtgggtggcccagttgttgag 235 |||||| |||| |||||||||||| || || || |||||||| || ||||| |||||||| Sbjct: 882 gaaggtatcgatgatggtggtgtggagtggatcactgaggtgagtagcccaattgttgag 823 Query: 236 cggacccttgccggtggcggcggcctgcacggcgaagccgaggaaggcgaccatggcgag 295 ||||| || || ||||| || || || || ||||| || | |||||||||||| || | Sbjct: 822 tggacctttacctgtggcagccgcttgaaccgcgaatcccaagaaggcgaccatcgcaac 763 Query: 296 gcgggcgtgcttgatctc 313 || || ||||||||||| Sbjct: 762 acgtgcatgcttgatctc 745
>emb|BX830685.1|CNS09ZE5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS14ZD06 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 940 Score = 105 bits (53), Expect = 2e-19 Identities = 178/217 (82%), Gaps = 2/217 (0%) Strand = Plus / Minus Query: 408 agctccgcgttgcgttggaactcgatgtacccgatcaccagcacctcgatccagatgagc 467 ||||| |||||||| |||||||||||||| |||||||| | |||||||||||| || | Sbjct: 650 agctcggcgttgcgctggaactcgatgtagccgatcactaacacctcgatccatatcaat 591 Query: 468 gtggtgatcgtgaacggcagcggctgacccaggtacgacgacccgtccaccagctccacc 527 || | ||||| ||| || | ||||| |||| ||| ||||| || || || ||||||||| Sbjct: 590 gtcgagatcgagaaaggtaatggctgccccaagtaggacgatccatctacaagctccacc 531 Query: 528 ttgcccggcgtcctgccaggtgacgccggtgagccactcgacggtgagggcgcccgaggg 587 ||||| | |||| ||||| || |||||||| ||||| ||||||| ||| ||||| ||| | Sbjct: 530 ttgccag-cgtcttgccatgtaacgccggtaagccattcgacggagagagcgcc-gagag 473 Query: 588 tggcgagcatggcccagcggccgtggatgagctcgca 624 | |||||||| ||||| || ||||||||||| ||||| Sbjct: 472 tagcgagcatcgcccaccgtccgtggatgagttcgca 436 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Minus Query: 176 gaaggtgtcgaagatggtggtgtgcagcgggtcgctgaggtgggtggcccagttgttgag 235 |||||| |||| |||||||||||| || || || |||||||| || ||||| |||||||| Sbjct: 882 gaaggtatcgatgatggtggtgtggagtggatcactgaggtgagtagcccaattgttgag 823 Query: 236 cggacc 241 ||||| Sbjct: 822 tggacc 817
>ref|NM_111728.2| Arabidopsis thaliana LHCB4.2 AT3G08940 (LHCB4.2) transcript variant AT3G08940.2 mRNA, complete cds Length = 1109 Score = 81.8 bits (41), Expect = 3e-12 Identities = 181/225 (80%), Gaps = 2/225 (0%) Strand = Plus / Minus Query: 397 tctccgggtccagctccgcgttgcgttggaactcgatgtacccgatcaccagcacctcga 456 |||||| |||||| || ||||| ||||||||||| ||||| |||||||| | ||| |||| Sbjct: 672 tctccgagtccagttcagcgtttcgttggaactcaatgtagccgatcactaacacttcga 613 Query: 457 tccagatgagcgtggtgatcgtgaacggcagcggctgacccaggtacgacgacccgtcca 516 |||| || | || | ||| | |||||||| ||||| || | ||| || || || |||| Sbjct: 612 tccatatcaatgtcgagatagagaacggcaatggctgtcctaagtaagatgatccatcca 553 Query: 517 ccagctccaccttgcccggcgtcctgccaggtgacgccggtgagccactcgacggtgagg 576 | ||||| |||||||| |||||| ||||| || || ||||||||||| |||||||||| Sbjct: 552 ctagctctaccttgcc-ggcgtcttgccaagtaacaccggtgagccattcgacggtgata 494 Query: 577 gcgcccgagggtggcgagcatggcccagcggccgtggatgagctc 621 ||| || || ||||||||||| ||||| || ||||| || ||||| Sbjct: 493 gcg-ccaagagtggcgagcattgcccaccgaccgtgaatcagctc 450 Score = 54.0 bits (27), Expect = 6e-04 Identities = 54/63 (85%) Strand = Plus / Minus Query: 176 gaaggtgtcgaagatggtggtgtgcagcgggtcgctgaggtgggtggcccagttgttgag 235 |||||| |||| ||||||||||| || ||||| || ||||| || |||||||||||||| Sbjct: 893 gaaggtatcgataatggtggtgtgaagtgggtcactaaggtgagtcgcccagttgttgag 834 Query: 236 cgg 238 ||| Sbjct: 833 cgg 831
>emb|AL161946.1|ATF7A7 Arabidopsis thaliana DNA chromosome 5, BAC clone F7A7 (ESSA project) Length = 86690 Score = 81.8 bits (41), Expect = 3e-12 Identities = 224/285 (78%) Strand = Plus / Minus Query: 176 gaaggtgtcgaagatggtggtgtgcagcgggtcgctgaggtgggtggcccagttgttgag 235 |||||| |||| |||||||||||| || || || |||||||| || ||||| |||||||| Sbjct: 17890 gaaggtatcgatgatggtggtgtggagtggatcactgaggtgagtagcccaattgttgag 17831 Query: 236 cggacccttgccggtggcggcggcctgcacggcgaagccgaggaaggcgaccatggcgag 295 ||||| || || || || || || || || ||||| || | |||||||||||| || || Sbjct: 17830 tggacctttacctgttgcagccgcttgaaccgcgaatcccaagaaggcgaccatcgcaag 17771 Query: 296 gcgggcgtgcttgatctccgccagctgcagagtctccttcttctccgggtccgccgcgag 355 || || ||||||||||| || | ||| || | ||||||||||||| ||||| | Sbjct: 17770 acgtgcatgcttgatctcagctaactgaagttgagcagtcttctccgggtcagccgctaa 17711 Query: 356 tcccagcgggtcgaagtaggagcctccggggtagagcctcctctccgggtccagctccgc 415 || |||||||| ||| | |||||||||||| | | | |||||| || ||||| || Sbjct: 17710 acctagcgggtcaaagaacttgcctccggggtataaacgcttctccgaatcaagctcggc 17651 Query: 416 gttgcgttggaactcgatgtacccgatcaccagcacctcgatcca 460 |||||| |||||||||||||| |||||||| | |||||||||||| Sbjct: 17650 gttgcgctggaactcgatgtagccgatcactaacacctcgatcca 17606 Score = 60.0 bits (30), Expect = 9e-06 Identities = 76/90 (84%), Gaps = 1/90 (1%) Strand = Plus / Minus Query: 535 gcgtcctgccaggtgacgccggtgagccactcgacggtgagggcgcccgagggtggcgag 594 ||||| ||||| || |||||||| ||||| ||||||| ||| ||||| ||| || ||||| Sbjct: 17245 gcgtcttgccatgtaacgccggtaagccattcgacggagagagcgcc-gagagtagcgag 17187 Query: 595 catggcccagcggccgtggatgagctcgca 624 ||| ||||| || ||||||||||| ||||| Sbjct: 17186 catcgcccaccgtccgtggatgagttcgca 17157
>gb|AY081608.1| Arabidopsis thaliana putative chlorophyll a/b-binding protein (At3g08940) mRNA, complete cds Length = 881 Score = 81.8 bits (41), Expect = 3e-12 Identities = 181/225 (80%), Gaps = 2/225 (0%) Strand = Plus / Minus Query: 397 tctccgggtccagctccgcgttgcgttggaactcgatgtacccgatcaccagcacctcga 456 |||||| |||||| || ||||| ||||||||||| ||||| |||||||| | ||| |||| Sbjct: 631 tctccgagtccagttcagcgtttcgttggaactcaatgtagccgatcactaacacttcga 572 Query: 457 tccagatgagcgtggtgatcgtgaacggcagcggctgacccaggtacgacgacccgtcca 516 |||| || | || | ||| | |||||||| ||||| || | ||| || || || |||| Sbjct: 571 tccatatcaatgtcgagatagagaacggcaatggctgtcctaagtaagatgatccatcca 512 Query: 517 ccagctccaccttgcccggcgtcctgccaggtgacgccggtgagccactcgacggtgagg 576 | ||||| |||||||| |||||| ||||| || || ||||||||||| |||||||||| Sbjct: 511 ctagctctaccttgcc-ggcgtcttgccaagtaacaccggtgagccattcgacggtgata 453 Query: 577 gcgcccgagggtggcgagcatggcccagcggccgtggatgagctc 621 ||| || || ||||||||||| ||||| || ||||| || ||||| Sbjct: 452 gcg-ccaagagtggcgagcattgcccaccgaccgtgaatcagctc 409 Score = 54.0 bits (27), Expect = 6e-04 Identities = 54/63 (85%) Strand = Plus / Minus Query: 176 gaaggtgtcgaagatggtggtgtgcagcgggtcgctgaggtgggtggcccagttgttgag 235 |||||| |||| ||||||||||| || ||||| || ||||| || |||||||||||||| Sbjct: 852 gaaggtatcgataatggtggtgtgaagtgggtcactaaggtgagtcgcccagttgttgag 793 Query: 236 cgg 238 ||| Sbjct: 792 cgg 790
>gb|AY065140.1| Arabidopsis thaliana putative chlorophyll a/b-binding protein (At3g08940; T16O11.12) mRNA, complete cds Length = 1023 Score = 81.8 bits (41), Expect = 3e-12 Identities = 181/225 (80%), Gaps = 2/225 (0%) Strand = Plus / Minus Query: 397 tctccgggtccagctccgcgttgcgttggaactcgatgtacccgatcaccagcacctcga 456 |||||| |||||| || ||||| ||||||||||| ||||| |||||||| | ||| |||| Sbjct: 672 tctccgagtccagttcagcgtttcgttggaactcaatgtagccgatcactaacacttcga 613 Query: 457 tccagatgagcgtggtgatcgtgaacggcagcggctgacccaggtacgacgacccgtcca 516 |||| || | || | ||| | |||||||| ||||| || | ||| || || || |||| Sbjct: 612 tccatatcaatgtcgagatagagaacggcaatggctgtcctaagtaagatgatccatcca 553 Query: 517 ccagctccaccttgcccggcgtcctgccaggtgacgccggtgagccactcgacggtgagg 576 | ||||| |||||||| |||||| ||||| || || ||||||||||| |||||||||| Sbjct: 552 ctagctctaccttgcc-ggcgtcttgccaagtaacaccggtgagccattcgacggtgata 494 Query: 577 gcgcccgagggtggcgagcatggcccagcggccgtggatgagctc 621 ||| || || ||||||||||| ||||| || ||||| || ||||| Sbjct: 493 gcg-ccaagagtggcgagcattgcccaccgaccgtgaatcagctc 450 Score = 54.0 bits (27), Expect = 6e-04 Identities = 54/63 (85%) Strand = Plus / Minus Query: 176 gaaggtgtcgaagatggtggtgtgcagcgggtcgctgaggtgggtggcccagttgttgag 235 |||||| |||| ||||||||||| || ||||| || ||||| || |||||||||||||| Sbjct: 893 gaaggtatcgataatggtggtgtgaagtgggtcactaaggtgagtcgcccagttgttgag 834 Query: 236 cgg 238 ||| Sbjct: 833 cgg 831
>emb|BX822436.1|CNS0A619 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB38ZB11 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1004 Score = 81.8 bits (41), Expect = 3e-12 Identities = 181/225 (80%), Gaps = 2/225 (0%) Strand = Plus / Minus Query: 397 tctccgggtccagctccgcgttgcgttggaactcgatgtacccgatcaccagcacctcga 456 |||||| |||||| || ||||| ||||||||||| ||||| |||||||| | ||| |||| Sbjct: 653 tctccgagtccagttcagcgtttcgttggaactcaatgtagccgatcactaacacttcga 594 Query: 457 tccagatgagcgtggtgatcgtgaacggcagcggctgacccaggtacgacgacccgtcca 516 |||| || | || | ||| | |||||||| ||||| || | ||| || || || |||| Sbjct: 593 tccatatcaatgtcgagatagagaacggcaatggctgtcctaagtaagatgatccatcca 534 Query: 517 ccagctccaccttgcccggcgtcctgccaggtgacgccggtgagccactcgacggtgagg 576 | ||||| |||||||| |||||| ||||| || || ||||||||||| |||||||||| Sbjct: 533 ctagctctaccttgcc-ggcgtcttgccaagtaacaccggtgagccattcgacggtgata 475 Query: 577 gcgcccgagggtggcgagcatggcccagcggccgtggatgagctc 621 ||| || || ||||||||||| ||||| || ||||| || ||||| Sbjct: 474 gcg-ccaagagtggcgagcattgcccaccgaccgtgaatcagctc 431 Score = 54.0 bits (27), Expect = 6e-04 Identities = 54/63 (85%) Strand = Plus / Minus Query: 176 gaaggtgtcgaagatggtggtgtgcagcgggtcgctgaggtgggtggcccagttgttgag 235 |||||| |||| ||||||||||| || ||||| || ||||| || |||||||||||||| Sbjct: 874 gaaggtatcgataatggtggtgtgaagtgggtcactaaggtgagtcgcccagttgttgag 815 Query: 236 cgg 238 ||| Sbjct: 814 cgg 812
>emb|BX823086.1|CNS0A5XC Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB89ZD02 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 807 Score = 81.8 bits (41), Expect = 3e-12 Identities = 181/225 (80%), Gaps = 2/225 (0%) Strand = Plus / Minus Query: 397 tctccgggtccagctccgcgttgcgttggaactcgatgtacccgatcaccagcacctcga 456 |||||| |||||| || ||||| ||||||||||| ||||| |||||||| | ||| |||| Sbjct: 617 tctccgagtccagttcagcgtttcgttggaactcaatgtagccgatcactaacacttcga 558 Query: 457 tccagatgagcgtggtgatcgtgaacggcagcggctgacccaggtacgacgacccgtcca 516 |||| || | || | ||| | |||||||| ||||| || | ||| || || || |||| Sbjct: 557 tccatatcaatgtcgagatagagaacggcaatggctgtcctaagtaagatgatccatcca 498 Query: 517 ccagctccaccttgcccggcgtcctgccaggtgacgccggtgagccactcgacggtgagg 576 | ||||| |||||||| |||||| ||||| || || ||||||||||| |||||||||| Sbjct: 497 ctagctctaccttgcc-ggcgtcttgccaagtaacaccggtgagccattcgacggtgata 439 Query: 577 gcgcccgagggtggcgagcatggcccagcggccgtggatgagctc 621 ||| || || ||||||||||| ||||| || ||||| || ||||| Sbjct: 438 gcg-ccaagagtggcgagcattgcccaccgaccgtgaatcagctc 395
>emb|BX822730.1|CNS0A5TB Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB5ZH12 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 971 Score = 81.8 bits (41), Expect = 3e-12 Identities = 181/225 (80%), Gaps = 2/225 (0%) Strand = Plus / Minus Query: 397 tctccgggtccagctccgcgttgcgttggaactcgatgtacccgatcaccagcacctcga 456 |||||| |||||| || ||||| ||||||||||| ||||| |||||||| | ||| |||| Sbjct: 642 tctccgagtccagttcagcgtttcgttggaactcaatgtagccgatcactaacacttcga 583 Query: 457 tccagatgagcgtggtgatcgtgaacggcagcggctgacccaggtacgacgacccgtcca 516 |||| || | || | ||| | |||||||| ||||| || | ||| || || || |||| Sbjct: 582 tccatatcaatgtcgagatagagaacggcaatggctgtcctaagtaagatgatccatcca 523 Query: 517 ccagctccaccttgcccggcgtcctgccaggtgacgccggtgagccactcgacggtgagg 576 | ||||| |||||||| |||||| ||||| || || ||||||||||| |||||||||| Sbjct: 522 ctagctctaccttgcc-ggcgtcttgccaagtaacaccggtgagccattcgacggtgata 464 Query: 577 gcgcccgagggtggcgagcatggcccagcggccgtggatgagctc 621 ||| || || ||||||||||| ||||| || ||||| || ||||| Sbjct: 463 gcg-ccaagagtggcgagcattgcccaccgaccgtgaatcagctc 420 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Minus Query: 176 gaaggtgtcgaagatggtggtgtgcagcgggtcgctgaggtgggtggcccagttgttgag 235 |||||| |||| ||||||||||| || ||||| || ||||| ||||||||||||||||| Sbjct: 863 gaaggtatcgataatggtggtgtgaagtgggtcactaaggtgagtggcccagttgttgag 804 Query: 236 cgg 238 ||| Sbjct: 803 cgg 801
>emb|BX823814.1|CNS0A5CT Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS78ZG07 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 688 Score = 81.8 bits (41), Expect = 3e-12 Identities = 181/225 (80%), Gaps = 2/225 (0%) Strand = Plus / Minus Query: 397 tctccgggtccagctccgcgttgcgttggaactcgatgtacccgatcaccagcacctcga 456 |||||| |||||| || ||||| ||||||||||| ||||| |||||||| | ||| |||| Sbjct: 334 tctccgagtccagttcagcgtttcgttggaactcaatgtagccgatcactaacacttcga 275 Query: 457 tccagatgagcgtggtgatcgtgaacggcagcggctgacccaggtacgacgacccgtcca 516 |||| || | || | ||| | |||||||| ||||| || | ||| || || || |||| Sbjct: 274 tccatatcaatgtcgagatagagaacggcaatggctgtcctaagtaagatgatccatcca 215 Query: 517 ccagctccaccttgcccggcgtcctgccaggtgacgccggtgagccactcgacggtgagg 576 | ||||| |||||||| |||||| ||||| || || ||||||||||| |||||||||| Sbjct: 214 ctagctctaccttgcc-ggcgtcttgccaagtaacaccggtgagccattcgacggtgata 156 Query: 577 gcgcccgagggtggcgagcatggcccagcggccgtggatgagctc 621 ||| || || ||||||||||| ||||| || ||||| || ||||| Sbjct: 155 gcg-ccaagagtggcgagcattgcccaccgaccgtgaatcagctc 112 Score = 54.0 bits (27), Expect = 6e-04 Identities = 54/63 (85%) Strand = Plus / Minus Query: 176 gaaggtgtcgaagatggtggtgtgcagcgggtcgctgaggtgggtggcccagttgttgag 235 |||||| |||| ||||||||||| || ||||| || ||||| || |||||||||||||| Sbjct: 555 gaaggtatcgataatggtggtgtgaagtgggtcactaaggtgagtcgcccagttgttgag 496 Query: 236 cgg 238 ||| Sbjct: 495 cgg 493
>emb|BX823751.1|CNS0A5AT Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS72ZB02 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 981 Score = 81.8 bits (41), Expect = 3e-12 Identities = 181/225 (80%), Gaps = 2/225 (0%) Strand = Plus / Minus Query: 397 tctccgggtccagctccgcgttgcgttggaactcgatgtacccgatcaccagcacctcga 456 |||||| |||||| || ||||| ||||||||||| ||||| |||||||| | ||| |||| Sbjct: 652 tctccgagtccagttcagcgtttcgttggaactcaatgtagccgatcactaacacttcga 593 Query: 457 tccagatgagcgtggtgatcgtgaacggcagcggctgacccaggtacgacgacccgtcca 516 |||| || | || | ||| | |||||||| ||||| || | ||| || || || |||| Sbjct: 592 tccatatcaatgtcgagatagagaacggcaatggctgtcctaagtaagatgatccatcca 533 Query: 517 ccagctccaccttgcccggcgtcctgccaggtgacgccggtgagccactcgacggtgagg 576 | ||||| |||||||| |||||| ||||| || || ||||||||||| |||||||||| Sbjct: 532 ctagctctaccttgcc-ggcgtcttgccaagtaacaccggtgagccattcgacggtgata 474 Query: 577 gcgcccgagggtggcgagcatggcccagcggccgtggatgagctc 621 ||| || || ||||||||||| ||||| || ||||| || ||||| Sbjct: 473 gcg-ccaagagtggcgagcattgcccaccgaccgtgaatcagctc 430 Score = 54.0 bits (27), Expect = 6e-04 Identities = 54/63 (85%) Strand = Plus / Minus Query: 176 gaaggtgtcgaagatggtggtgtgcagcgggtcgctgaggtgggtggcccagttgttgag 235 |||||| |||| ||||||||||| || ||||| || ||||| || |||||||||||||| Sbjct: 873 gaaggtatcgataatggtggtgtgaagtgggtcactaaggtgagtcgcccagttgttgag 814 Query: 236 cgg 238 ||| Sbjct: 813 cgg 811
>emb|BX823498.1|CNS0A5AS Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS44ZD12 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 990 Score = 81.8 bits (41), Expect = 3e-12 Identities = 181/225 (80%), Gaps = 2/225 (0%) Strand = Plus / Minus Query: 397 tctccgggtccagctccgcgttgcgttggaactcgatgtacccgatcaccagcacctcga 456 |||||| |||||| || ||||| ||||||||||| ||||| |||||||| | ||| |||| Sbjct: 662 tctccgagtccagttcagcgtttcgttggaactcaatgtagccgatcactaacacttcga 603 Query: 457 tccagatgagcgtggtgatcgtgaacggcagcggctgacccaggtacgacgacccgtcca 516 |||| || | || | ||| | |||||||| ||||| || | ||| || || || |||| Sbjct: 602 tccatatcaatgtcgagatagagaacggcaatggctgtcctaagtaagatgatccatcca 543 Query: 517 ccagctccaccttgcccggcgtcctgccaggtgacgccggtgagccactcgacggtgagg 576 | ||||| |||||||| |||||| ||||| || || ||||||||||| |||||||||| Sbjct: 542 ctagctctaccttgcc-ggcgtcttgccaagtaacaccggtgagccattcgacggtgata 484 Query: 577 gcgcccgagggtggcgagcatggcccagcggccgtggatgagctc 621 ||| || || ||||||||||| ||||| || ||||| || ||||| Sbjct: 483 gcg-ccaagagtggcgagcattgcccaccgaccgtgaatcagctc 440 Score = 54.0 bits (27), Expect = 6e-04 Identities = 54/63 (85%) Strand = Plus / Minus Query: 176 gaaggtgtcgaagatggtggtgtgcagcgggtcgctgaggtgggtggcccagttgttgag 235 |||||| |||| ||||||||||| || ||||| || ||||| || |||||||||||||| Sbjct: 883 gaaggtatcgataatggtggtgtgaagtgggtcactaaggtgagtcgcccagttgttgag 824 Query: 236 cgg 238 ||| Sbjct: 823 cgg 821
>emb|BX823387.1|CNS0A5AY Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS31ZA02 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 918 Score = 81.8 bits (41), Expect = 3e-12 Identities = 181/225 (80%), Gaps = 2/225 (0%) Strand = Plus / Minus Query: 397 tctccgggtccagctccgcgttgcgttggaactcgatgtacccgatcaccagcacctcga 456 |||||| |||||| || ||||| ||||||||||| ||||| |||||||| | ||| |||| Sbjct: 657 tctccgagtccagttcagcgtttcgttggaactcaatgtagccgatcactaacacttcga 598 Query: 457 tccagatgagcgtggtgatcgtgaacggcagcggctgacccaggtacgacgacccgtcca 516 |||| || | || | ||| | |||||||| ||||| || | ||| || || || |||| Sbjct: 597 tccatatcaatgtcgagatagagaacggcaatggctgtcctaagtaagatgatccatcca 538 Query: 517 ccagctccaccttgcccggcgtcctgccaggtgacgccggtgagccactcgacggtgagg 576 | ||||| |||||||| |||||| ||||| || || ||||||||||| |||||||||| Sbjct: 537 ctagctctaccttgcc-ggcgtcttgccaagtaacaccggtgagccattcgacggtgata 479 Query: 577 gcgcccgagggtggcgagcatggcccagcggccgtggatgagctc 621 ||| || || ||||||||||| ||||| || ||||| || ||||| Sbjct: 478 gcg-ccaagagtggcgagcattgcccaccgaccgtgaatcagctc 435 Score = 46.1 bits (23), Expect = 0.14 Identities = 53/63 (84%) Strand = Plus / Minus Query: 176 gaaggtgtcgaagatggtggtgtgcagcgggtcgctgaggtgggtggcccagttgttgag 235 |||||| |||| |||||||||| || ||||| || ||||| || |||||||||||||| Sbjct: 878 gaaggtatcgataatggtggtgttaagtgggtcactaaggtgagtcgcccagttgttgag 819 Query: 236 cgg 238 ||| Sbjct: 818 cgg 816
>emb|BX823817.1|CNS0A4NR Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS7ZA03 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 691 Score = 81.8 bits (41), Expect = 3e-12 Identities = 181/225 (80%), Gaps = 2/225 (0%) Strand = Plus / Minus Query: 397 tctccgggtccagctccgcgttgcgttggaactcgatgtacccgatcaccagcacctcga 456 |||||| |||||| || ||||| ||||||||||| ||||| |||||||| | ||| |||| Sbjct: 337 tctccgagtccagttcagcgtttcgttggaactcaatgtagccgatcactaacacttcga 278 Query: 457 tccagatgagcgtggtgatcgtgaacggcagcggctgacccaggtacgacgacccgtcca 516 |||| || | || | ||| | |||||||| ||||| || | ||| || || || |||| Sbjct: 277 tccatatcaatgtcgagatagagaacggcaatggctgtcctaagtaagatgatccatcca 218 Query: 517 ccagctccaccttgcccggcgtcctgccaggtgacgccggtgagccactcgacggtgagg 576 | ||||| |||||||| |||||| ||||| || || ||||||||||| |||||||||| Sbjct: 217 ctagctctaccttgcc-ggcgtcttgccaagtaacaccggtgagccattcgacggtgata 159 Query: 577 gcgcccgagggtggcgagcatggcccagcggccgtggatgagctc 621 ||| || || ||||||||||| ||||| || ||||| || ||||| Sbjct: 158 gcg-ccaagagtggcgagcattgcccaccgaccgtgaatcagctc 115 Score = 54.0 bits (27), Expect = 6e-04 Identities = 54/63 (85%) Strand = Plus / Minus Query: 176 gaaggtgtcgaagatggtggtgtgcagcgggtcgctgaggtgggtggcccagttgttgag 235 |||||| |||| ||||||||||| || ||||| || ||||| || |||||||||||||| Sbjct: 558 gaaggtatcgataatggtggtgtgaagtgggtcactaaggtgagtcgcccagttgttgag 499 Query: 236 cgg 238 ||| Sbjct: 498 cgg 496
>emb|BX823629.1|CNS0A4ND Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS5ZA12 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 992 Score = 81.8 bits (41), Expect = 3e-12 Identities = 181/225 (80%), Gaps = 2/225 (0%) Strand = Plus / Minus Query: 397 tctccgggtccagctccgcgttgcgttggaactcgatgtacccgatcaccagcacctcga 456 |||||| |||||| || ||||| ||||||||||| ||||| |||||||| | ||| |||| Sbjct: 655 tctccgagtccagttcagcgtttcgttggaactcaatgtagccgatcactaacacttcga 596 Query: 457 tccagatgagcgtggtgatcgtgaacggcagcggctgacccaggtacgacgacccgtcca 516 |||| || | || | ||| | |||||||| ||||| || | ||| || || || |||| Sbjct: 595 tccatatcaatgtcgagatagagaacggcaatggctgtcctaagtaagatgatccatcca 536 Query: 517 ccagctccaccttgcccggcgtcctgccaggtgacgccggtgagccactcgacggtgagg 576 | ||||| |||||||| |||||| ||||| || || ||||||||||| |||||||||| Sbjct: 535 ctagctctaccttgcc-ggcgtcttgccaagtaacaccggtgagccattcgacggtgata 477 Query: 577 gcgcccgagggtggcgagcatggcccagcggccgtggatgagctc 621 ||| || || ||||||||||| ||||| || ||||| || ||||| Sbjct: 476 gcg-ccaagagtggcgagcattgcccaccgaccgtgaatcagctc 433 Score = 54.0 bits (27), Expect = 6e-04 Identities = 54/63 (85%) Strand = Plus / Minus Query: 176 gaaggtgtcgaagatggtggtgtgcagcgggtcgctgaggtgggtggcccagttgttgag 235 |||||| |||| ||||||||||| || ||||| || ||||| || |||||||||||||| Sbjct: 877 gaaggtatcgataatggtggtgtgaagtgggtcactaaggtgagtcgcccagttgttgag 818 Query: 236 cgg 238 ||| Sbjct: 817 cgg 815
>gb|AF134127.1| Arabidopsis thaliana Lhcb4.2 protein (Lhcb4.2) mRNA, complete cds Length = 1040 Score = 81.8 bits (41), Expect = 3e-12 Identities = 181/225 (80%), Gaps = 2/225 (0%) Strand = Plus / Minus Query: 397 tctccgggtccagctccgcgttgcgttggaactcgatgtacccgatcaccagcacctcga 456 |||||| |||||| || ||||| ||||||||||| ||||| |||||||| | ||| |||| Sbjct: 675 tctccgagtccagttcagcgtttcgttggaactcaatgtagccgatcactaacacttcga 616 Query: 457 tccagatgagcgtggtgatcgtgaacggcagcggctgacccaggtacgacgacccgtcca 516 |||| || | || | ||| | |||||||| ||||| || | ||| || || || |||| Sbjct: 615 tccatatcaatgtcgagatagagaacggcaatggctgtcctaagtaagatgatccatcca 556 Query: 517 ccagctccaccttgcccggcgtcctgccaggtgacgccggtgagccactcgacggtgagg 576 | ||||| |||||||| |||||| ||||| || || ||||||||||| |||||||||| Sbjct: 555 ctagctctaccttgcc-ggcgtcttgccaagtaacaccggtgagccattcgacggtgata 497 Query: 577 gcgcccgagggtggcgagcatggcccagcggccgtggatgagctc 621 ||| || || ||||||||||| ||||| || ||||| || ||||| Sbjct: 496 gcg-ccaagagtggcgagcattgcccaccgaccgtgaatcagctc 453 Score = 54.0 bits (27), Expect = 6e-04 Identities = 54/63 (85%) Strand = Plus / Minus Query: 176 gaaggtgtcgaagatggtggtgtgcagcgggtcgctgaggtgggtggcccagttgttgag 235 |||||| |||| ||||||||||| || ||||| || ||||| || |||||||||||||| Sbjct: 896 gaaggtatcgataatggtggtgtgaagtgggtcactaaggtgagtcgcccagttgttgag 837 Query: 236 cgg 238 ||| Sbjct: 836 cgg 834
>emb|X71878.1|ATLHCB4 A.thaliana Lhcb4 gene Length = 2100 Score = 81.8 bits (41), Expect = 3e-12 Identities = 224/285 (78%) Strand = Plus / Minus Query: 176 gaaggtgtcgaagatggtggtgtgcagcgggtcgctgaggtgggtggcccagttgttgag 235 |||||| |||| |||||||||||| || || || |||||||| || ||||| |||||||| Sbjct: 1991 gaaggtatcgatgatggtggtgtggagtggatcactgaggtgagtagcccaattgttgag 1932 Query: 236 cggacccttgccggtggcggcggcctgcacggcgaagccgaggaaggcgaccatggcgag 295 ||||| || || || || || || || || ||||| || | |||||||||||| || || Sbjct: 1931 tggacctttacctgttgcagccgcttgaaccgcgaatcccaagaaggcgaccatcgcaag 1872 Query: 296 gcgggcgtgcttgatctccgccagctgcagagtctccttcttctccgggtccgccgcgag 355 || || ||||||||||| || | ||| || | ||||||||||||| ||||| | Sbjct: 1871 acgtgcatgcttgatctcagctaactgaagttgagcagtcttctccgggtcagccgctaa 1812 Query: 356 tcccagcgggtcgaagtaggagcctccggggtagagcctcctctccgggtccagctccgc 415 || |||||||| ||| | |||||||||||| | | | |||||| || ||||| || Sbjct: 1811 acctagcgggtcaaagaacttgcctccggggtataaacgcttctccgaatcaagctcggc 1752 Query: 416 gttgcgttggaactcgatgtacccgatcaccagcacctcgatcca 460 |||||| |||||||||||||| |||||||| | |||||||||||| Sbjct: 1751 gttgcgctggaactcgatgtagccgatcactaacacctcgatcca 1707 Score = 60.0 bits (30), Expect = 9e-06 Identities = 76/90 (84%), Gaps = 1/90 (1%) Strand = Plus / Minus Query: 535 gcgtcctgccaggtgacgccggtgagccactcgacggtgagggcgcccgagggtggcgag 594 ||||| ||||| || |||||||| ||||| ||||||| ||| ||||| ||| || ||||| Sbjct: 1346 gcgtcttgccatgtaacgccggtaagccattcgacggagagagcgcc-gagagtagcgag 1288 Query: 595 catggcccagcggccgtggatgagctcgca 624 ||| ||||| || ||||||||||| ||||| Sbjct: 1287 catcgcccaccgtccgtggatgagttcgca 1258
>gb|AY171230.1| Chlamydomonas reinhardtii CP29-like protein (Lhcb4) mRNA, complete cds; nuclear gene for chloroplast product Length = 1382 Score = 65.9 bits (33), Expect = 2e-07 Identities = 39/41 (95%) Strand = Plus / Minus Query: 593 agcatggcccagcggccgtggatgagctcgcactcgcggaa 633 |||||||||||||||||||| || ||||||||||||||||| Sbjct: 452 agcatggcccagcggccgtgaatcagctcgcactcgcggaa 412 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 258 gcctgcacggcgaagccgaggaaggcgaccatggcgaggcgggcgtgcttgatctc 313 |||||||| || |||||| ||||| |||||| || |||||||||||||||||||| Sbjct: 782 gcctgcacaccgtagccgaagaaggagaccatcgccaggcgggcgtgcttgatctc 727
>dbj|AB051211.1| Chlamydomonas reinhardtii mRNA for light-harvesting chlorophyll-a/b binding protein Lhcb4, complete cds Length = 1411 Score = 65.9 bits (33), Expect = 2e-07 Identities = 39/41 (95%) Strand = Plus / Minus Query: 593 agcatggcccagcggccgtggatgagctcgcactcgcggaa 633 |||||||||||||||||||| || ||||||||||||||||| Sbjct: 490 agcatggcccagcggccgtgaatcagctcgcactcgcggaa 450 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 258 gcctgcacggcgaagccgaggaaggcgaccatggcgaggcgggcgtgcttgatctc 313 |||||||| || |||||| ||||| |||||| || |||||||||||||||||||| Sbjct: 820 gcctgcacaccgtagccgaagaaggagaccatcgccaggcgggcgtgcttgatctc 765
>dbj|AB051207.1| Chlamydomonas reinhardtii gene for light-harvesting chlorophyll-a/b binding protein Lhcb4, complete cds Length = 1607 Score = 65.9 bits (33), Expect = 2e-07 Identities = 39/41 (95%) Strand = Plus / Minus Query: 593 agcatggcccagcggccgtggatgagctcgcactcgcggaa 633 |||||||||||||||||||| || ||||||||||||||||| Sbjct: 829 agcatggcccagcggccgtgaatcagctcgcactcgcggaa 789 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 258 gcctgcacggcgaagccgaggaaggcgaccatggcgaggcgggcgtgcttgatctc 313 |||||||| || |||||| ||||| |||||| || |||||||||||||||||||| Sbjct: 1366 gcctgcacaccgtagccgaagaaggagaccatcgccaggcgggcgtgcttgatctc 1311
>ref|XM_472726.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 759 Score = 58.0 bits (29), Expect = 4e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 281 ggcgaccatggcgaggcgggcgtgcttgatctc 313 ||||| ||||||||||||||||||||||||||| Sbjct: 696 ggcgagcatggcgaggcgggcgtgcttgatctc 664
>emb|AL606636.4|OSJN00075 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0036B21, complete sequence Length = 138969 Score = 58.0 bits (29), Expect = 4e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 281 ggcgaccatggcgaggcgggcgtgcttgatctc 313 ||||| ||||||||||||||||||||||||||| Sbjct: 19722 ggcgagcatggcgaggcgggcgtgcttgatctc 19754
>gb|DQ427744.1| Sorghum propinquum locus HHU11 genomic sequence Length = 757 Score = 58.0 bits (29), Expect = 4e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 281 ggcgaccatggcgaggcgggcgtgcttgatctc 313 ||||| ||||||||||||||||||||||||||| Sbjct: 748 ggcgagcatggcgaggcgggcgtgcttgatctc 716
>gb|DQ427743.1| Sorghum bicolor voucher PI585454 locus HHU11 genomic sequence Length = 755 Score = 58.0 bits (29), Expect = 4e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 281 ggcgaccatggcgaggcgggcgtgcttgatctc 313 ||||| ||||||||||||||||||||||||||| Sbjct: 746 ggcgagcatggcgaggcgggcgtgcttgatctc 714
>gb|DQ427742.1| Sorghum bicolor voucher PI267539 locus HHU11 genomic sequence Length = 755 Score = 58.0 bits (29), Expect = 4e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 281 ggcgaccatggcgaggcgggcgtgcttgatctc 313 ||||| ||||||||||||||||||||||||||| Sbjct: 746 ggcgagcatggcgaggcgggcgtgcttgatctc 714
>gb|DQ427741.1| Sorghum bicolor voucher PI267408 locus HHU11 genomic sequence Length = 761 Score = 58.0 bits (29), Expect = 4e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 281 ggcgaccatggcgaggcgggcgtgcttgatctc 313 ||||| ||||||||||||||||||||||||||| Sbjct: 752 ggcgagcatggcgaggcgggcgtgcttgatctc 720
>gb|DQ427740.1| Sorghum bicolor voucher PI221607 locus HHU11 genomic sequence Length = 761 Score = 58.0 bits (29), Expect = 4e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 281 ggcgaccatggcgaggcgggcgtgcttgatctc 313 ||||| ||||||||||||||||||||||||||| Sbjct: 752 ggcgagcatggcgaggcgggcgtgcttgatctc 720
>gb|DQ427739.1| Sorghum bicolor voucher PI152702 locus HHU11 genomic sequence Length = 761 Score = 58.0 bits (29), Expect = 4e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 281 ggcgaccatggcgaggcgggcgtgcttgatctc 313 ||||| ||||||||||||||||||||||||||| Sbjct: 752 ggcgagcatggcgaggcgggcgtgcttgatctc 720
>gb|DQ427738.1| Sorghum bicolor voucher NSL92371 locus HHU11 genomic sequence Length = 761 Score = 58.0 bits (29), Expect = 4e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 281 ggcgaccatggcgaggcgggcgtgcttgatctc 313 ||||| ||||||||||||||||||||||||||| Sbjct: 752 ggcgagcatggcgaggcgggcgtgcttgatctc 720
>gb|DQ427737.1| Sorghum bicolor voucher NSL87902b locus HHU11 genomic sequence Length = 761 Score = 58.0 bits (29), Expect = 4e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 281 ggcgaccatggcgaggcgggcgtgcttgatctc 313 ||||| ||||||||||||||||||||||||||| Sbjct: 752 ggcgagcatggcgaggcgggcgtgcttgatctc 720
>gb|DQ427736.1| Sorghum bicolor voucher NSL87902a locus HHU11 genomic sequence Length = 761 Score = 58.0 bits (29), Expect = 4e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 281 ggcgaccatggcgaggcgggcgtgcttgatctc 313 ||||| ||||||||||||||||||||||||||| Sbjct: 752 ggcgagcatggcgaggcgggcgtgcttgatctc 720
>gb|DQ427735.1| Sorghum bicolor voucher NSL87666 locus HHU11 genomic sequence Length = 761 Score = 58.0 bits (29), Expect = 4e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 281 ggcgaccatggcgaggcgggcgtgcttgatctc 313 ||||| ||||||||||||||||||||||||||| Sbjct: 752 ggcgagcatggcgaggcgggcgtgcttgatctc 720
>gb|DQ427734.1| Sorghum bicolor voucher NSL77217 locus HHU11 genomic sequence Length = 761 Score = 58.0 bits (29), Expect = 4e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 281 ggcgaccatggcgaggcgggcgtgcttgatctc 313 ||||| ||||||||||||||||||||||||||| Sbjct: 752 ggcgagcatggcgaggcgggcgtgcttgatctc 720
>gb|DQ427733.1| Sorghum bicolor voucher NSL77034 locus HHU11 genomic sequence Length = 755 Score = 58.0 bits (29), Expect = 4e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 281 ggcgaccatggcgaggcgggcgtgcttgatctc 313 ||||| ||||||||||||||||||||||||||| Sbjct: 746 ggcgagcatggcgaggcgggcgtgcttgatctc 714
>gb|DQ427732.1| Sorghum bicolor voucher NSL56174 locus HHU11 genomic sequence Length = 761 Score = 58.0 bits (29), Expect = 4e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 281 ggcgaccatggcgaggcgggcgtgcttgatctc 313 ||||| ||||||||||||||||||||||||||| Sbjct: 752 ggcgagcatggcgaggcgggcgtgcttgatctc 720
>gb|DQ427731.1| Sorghum bicolor voucher NSL55243 locus HHU11 genomic sequence Length = 761 Score = 58.0 bits (29), Expect = 4e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 281 ggcgaccatggcgaggcgggcgtgcttgatctc 313 ||||| ||||||||||||||||||||||||||| Sbjct: 752 ggcgagcatggcgaggcgggcgtgcttgatctc 720
>gb|DQ427730.1| Sorghum bicolor voucher NSL51365 locus HHU11 genomic sequence Length = 761 Score = 58.0 bits (29), Expect = 4e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 281 ggcgaccatggcgaggcgggcgtgcttgatctc 313 ||||| ||||||||||||||||||||||||||| Sbjct: 752 ggcgagcatggcgaggcgggcgtgcttgatctc 720
>gb|DQ427729.1| Sorghum bicolor voucher NSL51030 locus HHU11 genomic sequence Length = 761 Score = 58.0 bits (29), Expect = 4e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 281 ggcgaccatggcgaggcgggcgtgcttgatctc 313 ||||| ||||||||||||||||||||||||||| Sbjct: 752 ggcgagcatggcgaggcgggcgtgcttgatctc 720
>gb|DQ427728.1| Sorghum bicolor voucher NSL50875 locus HHU11 genomic sequence Length = 761 Score = 58.0 bits (29), Expect = 4e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 281 ggcgaccatggcgaggcgggcgtgcttgatctc 313 ||||| ||||||||||||||||||||||||||| Sbjct: 752 ggcgagcatggcgaggcgggcgtgcttgatctc 720
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 58.0 bits (29), Expect = 4e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 281 ggcgaccatggcgaggcgggcgtgcttgatctc 313 ||||| ||||||||||||||||||||||||||| Sbjct: 22810947 ggcgagcatggcgaggcgggcgtgcttgatctc 22810979
>dbj|AK108672.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-148-H08, full insert sequence Length = 1377 Score = 58.0 bits (29), Expect = 4e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 281 ggcgaccatggcgaggcgggcgtgcttgatctc 313 ||||| ||||||||||||||||||||||||||| Sbjct: 102 ggcgagcatggcgaggcgggcgtgcttgatctc 134
>dbj|AK104811.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-G02, full insert sequence Length = 1138 Score = 58.0 bits (29), Expect = 4e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 281 ggcgaccatggcgaggcgggcgtgcttgatctc 313 ||||| ||||||||||||||||||||||||||| Sbjct: 758 ggcgagcatggcgaggcgggcgtgcttgatctc 726
>dbj|AK066070.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013055K10, full insert sequence Length = 1144 Score = 58.0 bits (29), Expect = 4e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 281 ggcgaccatggcgaggcgggcgtgcttgatctc 313 ||||| ||||||||||||||||||||||||||| Sbjct: 759 ggcgagcatggcgaggcgggcgtgcttgatctc 727
>ref|NM_180214.1| Arabidopsis thaliana LHCB4.2; chlorophyll binding AT3G08940 (LHCB4.2) transcript variant AT3G08940.1 mRNA, complete cds Length = 1194 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Minus Query: 397 tctccgggtccagctccgcgttgcgttggaactcgatgtacccgatcaccagcacctcga 456 |||||| |||||| || ||||| ||||||||||| ||||| |||||||| | ||| |||| Sbjct: 757 tctccgagtccagttcagcgtttcgttggaactcaatgtagccgatcactaacacttcga 698 Query: 457 tcca 460 |||| Sbjct: 697 tcca 694 Score = 54.0 bits (27), Expect = 6e-04 Identities = 54/63 (85%) Strand = Plus / Minus Query: 176 gaaggtgtcgaagatggtggtgtgcagcgggtcgctgaggtgggtggcccagttgttgag 235 |||||| |||| ||||||||||| || ||||| || ||||| || |||||||||||||| Sbjct: 978 gaaggtatcgataatggtggtgtgaagtgggtcactaaggtgagtcgcccagttgttgag 919 Query: 236 cgg 238 ||| Sbjct: 918 cgg 916 Score = 52.0 bits (26), Expect = 0.002 Identities = 75/90 (83%), Gaps = 1/90 (1%) Strand = Plus / Minus Query: 532 ccggcgtcctgccaggtgacgccggtgagccactcgacggtgagggcgcccgagggtggc 591 |||||||| ||||| || || ||||||||||| |||||||||| ||| || || ||||| Sbjct: 538 ccggcgtcttgccaagtaacaccggtgagccattcgacggtgatagcg-ccaagagtggc 480 Query: 592 gagcatggcccagcggccgtggatgagctc 621 |||||| ||||| || ||||| || ||||| Sbjct: 479 gagcattgcccaccgaccgtgaatcagctc 450
>gb|AY954735.1| Ostreococcus tauri chloroplast light-harvesting complex I protein precursor Lhca3 gene, complete cds; nuclear gene for chloroplast product Length = 1113 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 591 cgagcatggcccagcggccgtggatgagctcg 622 ||||||| |||||||||||||||||||||||| Sbjct: 610 cgagcatcgcccagcggccgtggatgagctcg 579 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 287 catggcgaggcgggcgtgcttgatctcc 314 ||||||||||||| ||| |||||||||| Sbjct: 972 catggcgaggcggccgttcttgatctcc 945
>gb|AC010871.7|ATAC010871 Arabidopsis thaliana chromosome III BAC T16O11 genomic sequence, complete sequence Length = 80381 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 397 tctccgggtccagctccgcgttgcgttggaactcgatgtacccgatcaccagcacctcga 456 |||||| |||||| || ||||| ||||||||||| ||||| |||||||| | ||| |||| Sbjct: 38113 tctccgagtccagttcagcgtttcgttggaactcaatgtagccgatcactaacacttcga 38172 Query: 457 tcca 460 |||| Sbjct: 38173 tcca 38176 Score = 54.0 bits (27), Expect = 6e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 176 gaaggtgtcgaagatggtggtgtgcagcgggtcgctgaggtgggtggcccagttgttgag 235 |||||| |||| ||||||||||| || ||||| || ||||| || |||||||||||||| Sbjct: 37892 gaaggtatcgataatggtggtgtgaagtgggtcactaaggtgagtcgcccagttgttgag 37951 Query: 236 cgg 238 ||| Sbjct: 37952 cgg 37954 Score = 52.0 bits (26), Expect = 0.002 Identities = 75/90 (83%), Gaps = 1/90 (1%) Strand = Plus / Plus Query: 532 ccggcgtcctgccaggtgacgccggtgagccactcgacggtgagggcgcccgagggtggc 591 |||||||| ||||| || || ||||||||||| |||||||||| ||| || || ||||| Sbjct: 38332 ccggcgtcttgccaagtaacaccggtgagccattcgacggtgatagcg-ccaagagtggc 38390 Query: 592 gagcatggcccagcggccgtggatgagctc 621 |||||| ||||| || ||||| || ||||| Sbjct: 38391 gagcattgcccaccgaccgtgaatcagctc 38420
>gb|AF104633.2| Chlamydomonas reinhardtii light harvesting complex I protein precursor (Lhca1) mRNA, complete cds Length = 1129 Score = 54.0 bits (27), Expect = 6e-04 Identities = 63/75 (84%) Strand = Plus / Minus Query: 240 cccttgccggtggcggcggcctgcacggcgaagccgaggaaggcgaccatggcgaggcgg 299 |||||||||||||||||| ||| | ||||||| ||||| || |||||||| |||||| Sbjct: 648 cccttgccggtggcggcgtgctgggcaacgaagcccaggaaagcaaccatggccaggcgg 589 Query: 300 gcgtgcttgatctcc 314 ||| |||||||||| Sbjct: 588 ccgttcttgatctcc 574 Score = 48.1 bits (24), Expect = 0.035 Identities = 33/36 (91%) Strand = Plus / Minus Query: 593 agcatggcccagcggccgtggatgagctcgcactcg 628 |||||||||||||| |||||||||| ||||| |||| Sbjct: 306 agcatggcccagcgaccgtggatgacctcgctctcg 271
>gb|BC053854.1| Homo sapiens cDNA clone IMAGE:5194336, partial cds Length = 1044 Score = 54.0 bits (27), Expect = 6e-04 Identities = 63/75 (84%) Strand = Plus / Minus Query: 240 cccttgccggtggcggcggcctgcacggcgaagccgaggaaggcgaccatggcgaggcgg 299 |||||||||||| || |||||||||| |||||||| | || || ||||||||||||| Sbjct: 776 cccttgccggtgacgatggcctgcacgaagaagccgaacatggagaacatggcgaggcgg 717 Query: 300 gcgtgcttgatctcc 314 ||| |||||||||| Sbjct: 716 ccgttcttgatctcc 702
>dbj|AB122119.1| Chlamydomonas reinhardtii LhcI-6 gene for light-harvesting chlorophyll-a/b protein of photosystem I, complete cds Length = 1664 Score = 54.0 bits (27), Expect = 6e-04 Identities = 63/75 (84%) Strand = Plus / Minus Query: 240 cccttgccggtggcggcggcctgcacggcgaagccgaggaaggcgaccatggcgaggcgg 299 |||||||||||||||||| ||| | ||||||| ||||| || |||||||| |||||| Sbjct: 1395 cccttgccggtggcggcgtgctgggcaacgaagcccaggaaagcaaccatggccaggcgg 1336 Query: 300 gcgtgcttgatctcc 314 ||| |||||||||| Sbjct: 1335 ccgttcttgatctcc 1321
>emb|X65119.1|CRCABI1MR C.reinhardtii cabI-1 mRNA for light harvesting complex protein I-20 (LHCPI-20) Length = 1073 Score = 54.0 bits (27), Expect = 6e-04 Identities = 63/75 (84%) Strand = Plus / Minus Query: 240 cccttgccggtggcggcggcctgcacggcgaagccgaggaaggcgaccatggcgaggcgg 299 |||||||||||||||||| ||| | ||||||| ||||| || |||||||| |||||| Sbjct: 597 cccttgccggtggcggcgtgctgggcaacgaagcccaggaaagcaaccatggccaggcgg 538 Query: 300 gcgtgcttgatctcc 314 ||| |||||||||| Sbjct: 537 ccgttcttgatctcc 523 Score = 48.1 bits (24), Expect = 0.035 Identities = 33/36 (91%) Strand = Plus / Minus Query: 593 agcatggcccagcggccgtggatgagctcgcactcg 628 |||||||||||||| |||||||||| ||||| |||| Sbjct: 255 agcatggcccagcgaccgtggatgacctcgctctcg 220
>gb|AY103838.1| Zea mays PCO113775 mRNA sequence Length = 958 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 287 catggcgaggcgggcgtgcttgatctccgccagct 321 |||||||| |||||||||||||||||| ||||||| Sbjct: 744 catggcgatgcgggcgtgcttgatctcggccagct 710
>gb|U23190.1|ZMU23190 Zea mays chlorophyll a/b-binding apoprotein CP24 (Lhcb6-1) mRNA, complete cds Length = 1040 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 287 catggcgaggcgggcgtgcttgatctccgccagct 321 |||||||| |||||||||||||||||| ||||||| Sbjct: 707 catggcgatgcgggcgtgcttgatctcggccagct 673
>ref|NM_129568.2| Arabidopsis thaliana LHCB4.3; chlorophyll binding AT2G40100 (LHCB4.3) mRNA, complete cds Length = 1122 Score = 52.0 bits (26), Expect = 0.002 Identities = 71/86 (82%) Strand = Plus / Minus Query: 282 gcgaccatggcgaggcgggcgtgcttgatctccgccagctgcagagtctccttcttctcc 341 |||||||| ||||| || | |||||| ||||| ||||||| || ||| ||| |||||| Sbjct: 836 gcgaccatagcgagacgagagtgctttatctcagccagcttcaaagtatccaacttctct 777 Query: 342 gggtccgccgcgagtcccagcgggtc 367 || || ||||||||||||| |||||| Sbjct: 776 ggatcagccgcgagtcccaacgggtc 751
>ref|XM_464479.1| Oryza sativa (japonica cultivar-group), mRNA Length = 675 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 258 gcctgcacggcgaagccgaggaaggcgaccatggcgag 295 ||||| |||| ||||||||||||||||| ||||||||| Sbjct: 636 gcctggacggagaagccgaggaaggcgagcatggcgag 599
>ref|XM_464478.1| Oryza sativa (japonica cultivar-group), mRNA Length = 988 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 258 gcctgcacggcgaagccgaggaaggcgaccatggcgag 295 ||||| |||| ||||||||||||||||| ||||||||| Sbjct: 784 gcctggacggagaagccgaggaaggcgagcatggcgag 747
>ref|XM_507457.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1078 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 258 gcctgcacggcgaagccgaggaaggcgaccatggcgag 295 ||||| |||| ||||||||||||||||| ||||||||| Sbjct: 784 gcctggacggagaagccgaggaaggcgagcatggcgag 747
>ref|XM_507456.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1121 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 258 gcctgcacggcgaagccgaggaaggcgaccatggcgag 295 ||||| |||| ||||||||||||||||| ||||||||| Sbjct: 784 gcctggacggagaagccgaggaaggcgagcatggcgag 747
>ref|XM_507455.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1112 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 258 gcctgcacggcgaagccgaggaaggcgaccatggcgag 295 ||||| |||| ||||||||||||||||| ||||||||| Sbjct: 767 gcctggacggagaagccgaggaaggcgagcatggcgag 730
>ref|XM_507454.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1121 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 258 gcctgcacggcgaagccgaggaaggcgaccatggcgag 295 ||||| |||| ||||||||||||||||| ||||||||| Sbjct: 776 gcctggacggagaagccgaggaaggcgagcatggcgag 739
>ref|XM_507453.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1127 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 258 gcctgcacggcgaagccgaggaaggcgaccatggcgag 295 ||||| |||| ||||||||||||||||| ||||||||| Sbjct: 782 gcctggacggagaagccgaggaaggcgagcatggcgag 745
>ref|XM_507452.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1127 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 258 gcctgcacggcgaagccgaggaaggcgaccatggcgag 295 ||||| |||| ||||||||||||||||| ||||||||| Sbjct: 782 gcctggacggagaagccgaggaaggcgagcatggcgag 745
>ref|XM_507451.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1129 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 258 gcctgcacggcgaagccgaggaaggcgaccatggcgag 295 ||||| |||| ||||||||||||||||| ||||||||| Sbjct: 784 gcctggacggagaagccgaggaaggcgagcatggcgag 747
>ref|XM_507450.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1129 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 258 gcctgcacggcgaagccgaggaaggcgaccatggcgag 295 ||||| |||| ||||||||||||||||| ||||||||| Sbjct: 784 gcctggacggagaagccgaggaaggcgagcatggcgag 747
>ref|XM_507449.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1129 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 258 gcctgcacggcgaagccgaggaaggcgaccatggcgag 295 ||||| |||| ||||||||||||||||| ||||||||| Sbjct: 784 gcctggacggagaagccgaggaaggcgagcatggcgag 747
>ref|XM_507448.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1129 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 258 gcctgcacggcgaagccgaggaaggcgaccatggcgag 295 ||||| |||| ||||||||||||||||| ||||||||| Sbjct: 784 gcctggacggagaagccgaggaaggcgagcatggcgag 747
>ref|XM_464480.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1017 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 258 gcctgcacggcgaagccgaggaaggcgaccatggcgag 295 ||||| |||| ||||||||||||||||| ||||||||| Sbjct: 672 gcctggacggagaagccgaggaaggcgagcatggcgag 635
>ref|XM_507447.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1145 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 258 gcctgcacggcgaagccgaggaaggcgaccatggcgag 295 ||||| |||| ||||||||||||||||| ||||||||| Sbjct: 800 gcctggacggagaagccgaggaaggcgagcatggcgag 763
>ref|XM_507446.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1145 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 258 gcctgcacggcgaagccgaggaaggcgaccatggcgag 295 ||||| |||| ||||||||||||||||| ||||||||| Sbjct: 800 gcctggacggagaagccgaggaaggcgagcatggcgag 763
>ref|XM_507445.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1148 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 258 gcctgcacggcgaagccgaggaaggcgaccatggcgag 295 ||||| |||| ||||||||||||||||| ||||||||| Sbjct: 803 gcctggacggagaagccgaggaaggcgagcatggcgag 766
>ref|XM_507444.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1148 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 258 gcctgcacggcgaagccgaggaaggcgaccatggcgag 295 ||||| |||| ||||||||||||||||| ||||||||| Sbjct: 803 gcctggacggagaagccgaggaaggcgagcatggcgag 766
>ref|XM_507443.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1151 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 258 gcctgcacggcgaagccgaggaaggcgaccatggcgag 295 ||||| |||| ||||||||||||||||| ||||||||| Sbjct: 806 gcctggacggagaagccgaggaaggcgagcatggcgag 769
>ref|XM_507442.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1168 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 258 gcctgcacggcgaagccgaggaaggcgaccatggcgag 295 ||||| |||| ||||||||||||||||| ||||||||| Sbjct: 823 gcctggacggagaagccgaggaaggcgagcatggcgag 786
>ref|XM_507441.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1198 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 258 gcctgcacggcgaagccgaggaaggcgaccatggcgag 295 ||||| |||| ||||||||||||||||| ||||||||| Sbjct: 853 gcctggacggagaagccgaggaaggcgagcatggcgag 816
>ref|XM_506748.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1129 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 258 gcctgcacggcgaagccgaggaaggcgaccatggcgag 295 ||||| |||| ||||||||||||||||| ||||||||| Sbjct: 783 gcctggacggagaagccgaggaaggcgagcatggcgag 746
>gb|AY096735.1| Arabidopsis thaliana putative chlorophyll a/b binding protein (At2g40100) mRNA, complete cds Length = 862 Score = 52.0 bits (26), Expect = 0.002 Identities = 71/86 (82%) Strand = Plus / Minus Query: 282 gcgaccatggcgaggcgggcgtgcttgatctccgccagctgcagagtctccttcttctcc 341 |||||||| ||||| || | |||||| ||||| ||||||| || ||| ||| |||||| Sbjct: 755 gcgaccatagcgagacgagagtgctttatctcagccagcttcaaagtatccaacttctct 696 Query: 342 gggtccgccgcgagtcccagcgggtc 367 || || ||||||||||||| |||||| Sbjct: 695 ggatcagccgcgagtcccaacgggtc 670
>gb|AY070392.1| Arabidopsis thaliana putative chlorophyll a/b binding protein (At2g40100) mRNA, complete cds Length = 1025 Score = 52.0 bits (26), Expect = 0.002 Identities = 71/86 (82%) Strand = Plus / Minus Query: 282 gcgaccatggcgaggcgggcgtgcttgatctccgccagctgcagagtctccttcttctcc 341 |||||||| ||||| || | |||||| ||||| ||||||| || ||| ||| |||||| Sbjct: 836 gcgaccatagcgagacgagagtgctttatctcagccagcttcaaagtatccaacttctct 777 Query: 342 gggtccgccgcgagtcccagcgggtc 367 || || ||||||||||||| |||||| Sbjct: 776 ggatcagccgcgagtcccaacgggtc 751
>dbj|AK221043.1| Arabidopsis thaliana mRNA for Lhcb4- protein, partial cds, clone: RAFL22-74-I16 Length = 212 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Minus Query: 176 gaaggtgtcgaagatggtggtgtgcagcgggtcgctgaggtgggtggcccagttgttgag 235 |||||| |||| |||||||||||| || || || |||||||| || ||||| |||||||| Sbjct: 107 gaaggtatcgatgatggtggtgtggagtggatcactgaggtgagtagcccaattgttgag 48 Query: 236 cggacc 241 ||||| Sbjct: 47 tggacc 42
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 258 gcctgcacggcgaagccgaggaaggcgaccatggcgag 295 ||||| |||| ||||||||||||||||| ||||||||| Sbjct: 5468993 gcctggacggagaagccgaggaaggcgagcatggcgag 5469030
>emb|BX842453.1|CNS0A903 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB5ZG04 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 586 Score = 52.0 bits (26), Expect = 0.002 Identities = 71/86 (82%) Strand = Plus / Minus Query: 282 gcgaccatggcgaggcgggcgtgcttgatctccgccagctgcagagtctccttcttctcc 341 |||||||| ||||| || | |||||| ||||| ||||||| || ||| ||| |||||| Sbjct: 413 gcgaccatagcgagacgagagtgctttatctcagccagcttcaaagtatccaacttctct 354 Query: 342 gggtccgccgcgagtcccagcgggtc 367 || || ||||||||||||| |||||| Sbjct: 353 ggatcagccgcgagtcccaacgggtc 328
>gb|AF110787.1|AF110787 Volvox carteri f. nagariensis clone G12 light harvesting complex a protein (lhca) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 1162 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Minus Query: 257 ggcctgcacggcgaagccgaggaaggcgaccatggcgaggcgggcgtgcttgatctcc 314 |||||||||||||||||| | |||||| ||||| || |||||| ||| ||||| |||| Sbjct: 548 ggcctgcacggcgaagccaacgaaggcaaccatagcaaggcggccgttcttgacctcc 491
>gb|AY088398.1| Arabidopsis thaliana clone 6454 mRNA, complete sequence Length = 991 Score = 52.0 bits (26), Expect = 0.002 Identities = 71/86 (82%) Strand = Plus / Minus Query: 282 gcgaccatggcgaggcgggcgtgcttgatctccgccagctgcagagtctccttcttctcc 341 |||||||| ||||| || | |||||| ||||| ||||||| || ||| ||| |||||| Sbjct: 818 gcgaccatagcgagacgagagtgctttatctcagccagcttcaaagtatccaacttctct 759 Query: 342 gggtccgccgcgagtcccagcgggtc 367 || || ||||||||||||| |||||| Sbjct: 758 ggatcagccgcgagtcccaacgggtc 733 Score = 42.1 bits (21), Expect = 2.2 Identities = 36/41 (87%) Strand = Plus / Minus Query: 420 cgttggaactcgatgtacccgatcaccagcacctcgatcca 460 ||||||||||| ||||| |||| ||| |||||||| ||||| Sbjct: 683 cgttggaactcaatgtatccgaccactagcacctctatcca 643
>gb|AF134128.1| Arabidopsis thaliana Lhcb4:3 protein (Lhcb4.3) mRNA, complete cds Length = 966 Score = 52.0 bits (26), Expect = 0.002 Identities = 71/86 (82%) Strand = Plus / Minus Query: 282 gcgaccatggcgaggcgggcgtgcttgatctccgccagctgcagagtctccttcttctcc 341 |||||||| ||||| || | |||||| ||||| ||||||| || ||| ||| |||||| Sbjct: 775 gcgaccatagcgagacgagagtgctttatctcagccagcttcaaagtatccaacttctct 716 Query: 342 gggtccgccgcgagtcccagcgggtc 367 || || ||||||||||||| |||||| Sbjct: 715 ggatcagccgcgagtcccaacgggtc 690
>dbj|AP004191.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1524_D08 Length = 143046 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 258 gcctgcacggcgaagccgaggaaggcgaccatggcgag 295 ||||| |||| ||||||||||||||||| ||||||||| Sbjct: 122574 gcctggacggagaagccgaggaaggcgagcatggcgag 122611
>gb|AC007658.2|AC007658 Arabidopsis thaliana chromosome II section 216 of 255 of the complete sequence. Sequence from clones F27I1 Length = 12237 Score = 52.0 bits (26), Expect = 0.002 Identities = 71/86 (82%) Strand = Plus / Minus Query: 282 gcgaccatggcgaggcgggcgtgcttgatctccgccagctgcagagtctccttcttctcc 341 |||||||| ||||| || | |||||| ||||| ||||||| || ||| ||| |||||| Sbjct: 6928 gcgaccatagcgagacgagagtgctttatctcagccagcttcaaagtatccaacttctct 6869 Query: 342 gggtccgccgcgagtcccagcgggtc 367 || || ||||||||||||| |||||| Sbjct: 6868 ggatcagccgcgagtcccaacgggtc 6843
>dbj|AP004812.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0026H03 Length = 151827 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 258 gcctgcacggcgaagccgaggaaggcgaccatggcgag 295 ||||| |||| ||||||||||||||||| ||||||||| Sbjct: 13728 gcctggacggagaagccgaggaaggcgagcatggcgag 13765
>dbj|AK109398.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-A11, full insert sequence Length = 1128 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 258 gcctgcacggcgaagccgaggaaggcgaccatggcgag 295 ||||| |||| ||||||||||||||||| ||||||||| Sbjct: 783 gcctggacggagaagccgaggaaggcgagcatggcgag 746
>dbj|AK119554.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-E06, full insert sequence Length = 1129 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 258 gcctgcacggcgaagccgaggaaggcgaccatggcgag 295 ||||| |||| ||||||||||||||||| ||||||||| Sbjct: 784 gcctggacggagaagccgaggaaggcgagcatggcgag 747
>dbj|AK106085.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-B02, full insert sequence Length = 1198 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 258 gcctgcacggcgaagccgaggaaggcgaccatggcgag 295 ||||| |||| ||||||||||||||||| ||||||||| Sbjct: 853 gcctggacggagaagccgaggaaggcgagcatggcgag 816
>dbj|AK104557.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-305-G04, full insert sequence Length = 1112 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 258 gcctgcacggcgaagccgaggaaggcgaccatggcgag 295 ||||| |||| ||||||||||||||||| ||||||||| Sbjct: 767 gcctggacggagaagccgaggaaggcgagcatggcgag 730
>dbj|AK104535.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-304-E04, full insert sequence Length = 1148 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 258 gcctgcacggcgaagccgaggaaggcgaccatggcgag 295 ||||| |||| ||||||||||||||||| ||||||||| Sbjct: 803 gcctggacggagaagccgaggaaggcgagcatggcgag 766
>dbj|AK104522.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-E10, full insert sequence Length = 1078 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 258 gcctgcacggcgaagccgaggaaggcgaccatggcgag 295 ||||| |||| ||||||||||||||||| ||||||||| Sbjct: 784 gcctggacggagaagccgaggaaggcgagcatggcgag 747
>dbj|AK104734.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-C11, full insert sequence Length = 1121 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 258 gcctgcacggcgaagccgaggaaggcgaccatggcgag 295 ||||| |||| ||||||||||||||||| ||||||||| Sbjct: 776 gcctggacggagaagccgaggaaggcgagcatggcgag 739
>dbj|AK104646.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-H01, full insert sequence Length = 1127 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 258 gcctgcacggcgaagccgaggaaggcgaccatggcgag 295 ||||| |||| ||||||||||||||||| ||||||||| Sbjct: 782 gcctggacggagaagccgaggaaggcgagcatggcgag 745
>dbj|AK104636.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-D09, full insert sequence Length = 1126 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 258 gcctgcacggcgaagccgaggaaggcgaccatggcgag 295 ||||| |||| ||||||||||||||||| ||||||||| Sbjct: 781 gcctggacggagaagccgaggaaggcgagcatggcgag 744
>dbj|AK104469.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-D06, full insert sequence Length = 1145 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 258 gcctgcacggcgaagccgaggaaggcgaccatggcgag 295 ||||| |||| ||||||||||||||||| ||||||||| Sbjct: 800 gcctggacggagaagccgaggaaggcgagcatggcgag 763
>dbj|AK104458.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-B05, full insert sequence Length = 1129 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 258 gcctgcacggcgaagccgaggaaggcgaccatggcgag 295 ||||| |||| ||||||||||||||||| ||||||||| Sbjct: 784 gcctggacggagaagccgaggaaggcgagcatggcgag 747
>dbj|AK104446.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-211-B11, full insert sequence Length = 1148 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 258 gcctgcacggcgaagccgaggaaggcgaccatggcgag 295 ||||| |||| ||||||||||||||||| ||||||||| Sbjct: 803 gcctggacggagaagccgaggaaggcgagcatggcgag 766
>dbj|AK104392.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-201-H10, full insert sequence Length = 1151 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 258 gcctgcacggcgaagccgaggaaggcgaccatggcgag 295 ||||| |||| ||||||||||||||||| ||||||||| Sbjct: 806 gcctggacggagaagccgaggaaggcgagcatggcgag 769
>dbj|AK104385.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-201-E04, full insert sequence Length = 1121 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 258 gcctgcacggcgaagccgaggaaggcgaccatggcgag 295 ||||| |||| ||||||||||||||||| ||||||||| Sbjct: 784 gcctggacggagaagccgaggaaggcgagcatggcgag 747
>dbj|AK104348.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-F11, full insert sequence Length = 1145 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 258 gcctgcacggcgaagccgaggaaggcgaccatggcgag 295 ||||| |||| ||||||||||||||||| ||||||||| Sbjct: 800 gcctggacggagaagccgaggaaggcgagcatggcgag 763
>dbj|AK104215.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-305-H02, full insert sequence Length = 1129 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 258 gcctgcacggcgaagccgaggaaggcgaccatggcgag 295 ||||| |||| ||||||||||||||||| ||||||||| Sbjct: 784 gcctggacggagaagccgaggaaggcgagcatggcgag 747
>dbj|AK104096.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-201-B04, full insert sequence Length = 1129 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 258 gcctgcacggcgaagccgaggaaggcgaccatggcgag 295 ||||| |||| ||||||||||||||||| ||||||||| Sbjct: 784 gcctggacggagaagccgaggaaggcgagcatggcgag 747
>dbj|AK068102.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013130I24, full insert sequence Length = 1017 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 258 gcctgcacggcgaagccgaggaaggcgaccatggcgag 295 ||||| |||| ||||||||||||||||| ||||||||| Sbjct: 672 gcctggacggagaagccgaggaaggcgagcatggcgag 635
>dbj|AK060970.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-D07, full insert sequence Length = 1168 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 258 gcctgcacggcgaagccgaggaaggcgaccatggcgag 295 ||||| |||| ||||||||||||||||| ||||||||| Sbjct: 823 gcctggacggagaagccgaggaaggcgagcatggcgag 786
>dbj|AK060143.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-A02, full insert sequence Length = 988 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 258 gcctgcacggcgaagccgaggaaggcgaccatggcgag 295 ||||| |||| ||||||||||||||||| ||||||||| Sbjct: 784 gcctggacggagaagccgaggaaggcgagcatggcgag 747
>gb|AY106149.1| Zea mays PCO102434 mRNA sequence Length = 1081 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Minus Query: 269 gaagccgaggaaggcgaccatggcgaggcgggcgtgcttgatctcc 314 |||||||| |||||| | ||||||||||||| ||| |||||||||| Sbjct: 682 gaagccgacgaaggccagcatggcgaggcggccgttcttgatctcc 637
>gb|AY954731.1| Ostreococcus tauri chloroplast prasinophyte chlorophyll a/b-binding protein Lhcp1 gene, partial cds; nuclear gene for chloroplast product Length = 633 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Minus Query: 591 cgagcatggcccagcggccgtggatgagctcgc 623 ||||||||||||| ||||||||||||| ||||| Sbjct: 145 cgagcatggcccatcggccgtggatgatctcgc 113
>emb|X61361.1|EGLHCAB E.gracilis gene for light harvesting chlorophyll a/b binding protein of photosystem II Length = 7650 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 593 agcatggcccagcggccgtggatga 617 ||||||||||||||||||||||||| Sbjct: 5844 agcatggcccagcggccgtggatga 5820 Score = 46.1 bits (23), Expect = 0.14 Identities = 35/39 (89%) Strand = Plus / Minus Query: 593 agcatggcccagcggccgtggatgagctcgcactcgcgg 631 ||||||||||||||| ||||||||| |||| ||||||| Sbjct: 4548 agcatggcccagcgggcgtggatgacctcggcctcgcgg 4510 Score = 46.1 bits (23), Expect = 0.14 Identities = 35/39 (89%) Strand = Plus / Minus Query: 593 agcatggcccagcggccgtggatgagctcgcactcgcgg 631 ||||||||||||||| ||||||||| |||| ||||||| Sbjct: 1105 agcatggcccagcgggcgtggatgacctcggcctcgcgg 1067
>gb|AY267625.1| Bigelowiella natans chlorophyll a/b-binding protein CP29 mRNA, complete cds; nuclear gene for plastid product Length = 1031 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Minus Query: 581 ccgagggtggcgagcatggcccagcggccgtggatgagctcgcactcgcggaa 633 ||||| ||||| ||||| ||||| || ||||||||||| |||||||| ||||| Sbjct: 514 ccgagagtggcaagcatagcccaacgtccgtggatgagttcgcactcacggaa 462
>gb|AY171231.1| Chlamydomonas reinhardtii light-harvesting complex I protein (Lhca) mRNA, complete cds; nuclear gene for chloroplast product Length = 1274 Score = 48.1 bits (24), Expect = 0.035 Identities = 72/88 (81%) Strand = Plus / Minus Query: 227 gttgttgagcggacccttgccggtggcggcggcctgcacggcgaagccgaggaaggcgac 286 ||||| ||| || |||||||||||||||||| ||| | |||||||| ||| |||| | Sbjct: 661 gttgtcgagggggcccttgccggtggcggcgtactgggcagcgaagcccaggcaggcaat 602 Query: 287 catggcgaggcgggcgtgcttgatctcc 314 |||||| |||||| ||| ||||| |||| Sbjct: 601 catggccaggcggccgttcttgacctcc 574
>gb|AF268324.1|AF268324 Guillardia theta light-harvesting complex protein LHCC13 mRNA, complete cds Length = 787 Score = 48.1 bits (24), Expect = 0.035 Identities = 33/36 (91%) Strand = Plus / Minus Query: 278 gaaggcgaccatggcgaggcgggcgtgcttgatctc 313 |||||||| ||||||||||||| ||| ||||||||| Sbjct: 548 gaaggcgatcatggcgaggcggccgttcttgatctc 513
>gb|AY826900.1| Heterocapsa triquetra clone HTLHC3261 chloroplast light harvesting complex protein mRNA, complete cds; nuclear gene for chloroplast product Length = 1235 Score = 48.1 bits (24), Expect = 0.035 Identities = 30/32 (93%) Strand = Plus / Minus Query: 282 gcgaccatggcgaggcgggcgtgcttgatctc 313 |||||||||||||||||| |||||||||||| Sbjct: 884 gcgaccatggcgaggcggcagtgcttgatctc 853
>gb|AF195794.1|AF195794 Chlamydomonas reinhardtii chlorophyll A-B binding protein of LHCI (CAB6A) mRNA, complete cds Length = 1136 Score = 48.1 bits (24), Expect = 0.035 Identities = 33/36 (91%) Strand = Plus / Minus Query: 593 agcatggcccagcggccgtggatgagctcgcactcg 628 |||||||||||||| |||||||||| ||||| |||| Sbjct: 301 agcatggcccagcgaccgtggatgacctcgctctcg 266 Score = 44.1 bits (22), Expect = 0.55 Identities = 61/74 (82%) Strand = Plus / Minus Query: 241 ccttgccggtggcggcggcctgcacggcgaagccgaggaaggcgaccatggcgaggcggg 300 ||||||||||||||||| ||| | ||||||| ||||| || |||||||| ||||| Sbjct: 642 ccttgccggtggcggcgtgctgggcaacgaagcccaggaaagcaaccatggccaggcgcc 583 Query: 301 cgtgcttgatctcc 314 ||| |||||||||| Sbjct: 582 cgttcttgatctcc 569
>emb|AJ308530.2|RSP308530 Rhodomonas sp. CS24 lhcc1 gene (partial), lhcc2 gene, ORF1, lhcc3 gene and lhcc4 gene Length = 12446 Score = 48.1 bits (24), Expect = 0.035 Identities = 33/36 (91%) Strand = Plus / Minus Query: 278 gaaggcgaccatggcgaggcgggcgtgcttgatctc 313 |||||||| ||||||||||||| ||| ||||||||| Sbjct: 9125 gaaggcgatcatggcgaggcggccgttcttgatctc 9090
>ref|NM_192636.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 789 Score = 46.1 bits (23), Expect = 0.14 Identities = 62/75 (82%) Strand = Plus / Minus Query: 240 cccttgccggtggcggcggcctgcacggcgaagccgaggaaggcgaccatggcgaggcgg 299 |||||||||||| || |||||| ||| |||||||| | || || ||||||||||||| Sbjct: 698 cccttgccggtgacgatggcctggacgaagaagccgaacatggagaacatggcgaggcgg 639 Query: 300 gcgtgcttgatctcc 314 ||| |||||||||| Sbjct: 638 ccgttcttgatctcc 624
>gb|AY171229.1| Chlamydomonas reinhardtii light-harvesting complex II protein (Lhcb) mRNA, complete cds; nuclear gene for chloroplast product Length = 1024 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 591 cgagcatggcccagcggccgtggatgagctc 621 ||||||||||||||||| ||||||| ||||| Sbjct: 318 cgagcatggcccagcgggcgtggatcagctc 288
>emb|AJ000765.1|CRAJ765 Chlamydomonas reinhardtii mRNA for calreticulin Length = 2336 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Plus Query: 591 cgagcatggcccagcggccgtggatgagctc 621 ||||||||||||||||| ||||||| ||||| Sbjct: 104 cgagcatggcccagcgggcgtggatcagctc 134
>gb|AF495473.1| Chlamydomonas reinhardtii major light-harvesting complex II protein m1 gene, complete cds; nuclear gene for chloroplast product Length = 1934 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 591 cgagcatggcccagcggccgtggatgagctc 621 ||||||||||||||||| ||||||| ||||| Sbjct: 878 cgagcatggcccagcgggcgtggatcagctc 848
>gb|DQ122899.1| Chlamydomonas incerta chloroplast light harvesting complex I protein (LhcA) mRNA, complete cds; nuclear gene for chloroplast product Length = 746 Score = 46.1 bits (23), Expect = 0.14 Identities = 62/75 (82%) Strand = Plus / Minus Query: 240 cccttgccggtggcggcggcctgcacggcgaagccgaggaaggcgaccatggcgaggcgg 299 |||||||||||||||||| ||| | |||||||| ||| | |||| |||||| |||||| Sbjct: 647 cccttgccggtggcggcgtactgggcagcgaagcccaggcacgcgatcatggccaggcgg 588 Query: 300 gcgtgcttgatctcc 314 ||| ||||| |||| Sbjct: 587 ccgttcttgacctcc 573
>gb|AY617084.1| Pinus contorta chloroplast light harvesting chlorophyll a/b binding protein (ifg1934) gene, partial cds; nuclear gene for chloroplast product Length = 770 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 349 ccgcgagtcccagcgggtcgaag 371 ||||||||||||||||||||||| Sbjct: 621 ccgcgagtcccagcgggtcgaag 599
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 247 cggtggcggcggcctgcacggcg 269 ||||||||||||||||||||||| Sbjct: 1028816 cggtggcggcggcctgcacggcg 1028794
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 46.1 bits (23), Expect = 0.14 Identities = 62/75 (82%) Strand = Plus / Minus Query: 240 cccttgccggtggcggcggcctgcacggcgaagccgaggaaggcgaccatggcgaggcgg 299 |||||||||||| || |||||| ||| |||||||| | || || ||||||||||||| Sbjct: 10793694 cccttgccggtgacgatggcctggacgaagaagccgaacatggagaacatggcgaggcgg 10793635 Query: 300 gcgtgcttgatctcc 314 ||| |||||||||| Sbjct: 10793634 ccgttcttgatctcc 10793620
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 46.1 bits (23), Expect = 0.14 Identities = 62/75 (82%) Strand = Plus / Minus Query: 240 cccttgccggtggcggcggcctgcacggcgaagccgaggaaggcgaccatggcgaggcgg 299 |||||||||||| || |||||| ||| |||||||| | || || ||||||||||||| Sbjct: 23604241 cccttgccggtgacgatggcctggacgaagaagccgaacatggagaacatggcgaggcgg 23604182 Query: 300 gcgtgcttgatctcc 314 ||| |||||||||| Sbjct: 23604181 ccgttcttgatctcc 23604167 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 287 catggcgaggcgggcgtgcttgatctcc 314 ||||||||||||| ||| |||||||||| Sbjct: 30025000 catggcgaggcggccgttcttgatctcc 30024973 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 240 cccttgccggtggcggcggc 259 |||||||||||||||||||| Sbjct: 2202083 cccttgccggtggcggcggc 2202064
>dbj|AP005313.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0512H04 Length = 151049 Score = 46.1 bits (23), Expect = 0.14 Identities = 62/75 (82%) Strand = Plus / Minus Query: 240 cccttgccggtggcggcggcctgcacggcgaagccgaggaaggcgaccatggcgaggcgg 299 |||||||||||| || |||||| ||| |||||||| | || || ||||||||||||| Sbjct: 17417 cccttgccggtgacgatggcctggacgaagaagccgaacatggagaacatggcgaggcgg 17358 Query: 300 gcgtgcttgatctcc 314 ||| |||||||||| Sbjct: 17357 ccgttcttgatctcc 17343
>dbj|AP003278.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0518F01 Length = 154541 Score = 46.1 bits (23), Expect = 0.14 Identities = 62/75 (82%) Strand = Plus / Minus Query: 240 cccttgccggtggcggcggcctgcacggcgaagccgaggaaggcgaccatggcgaggcgg 299 |||||||||||| || |||||| ||| |||||||| | || || ||||||||||||| Sbjct: 66940 cccttgccggtgacgatggcctggacgaagaagccgaacatggagaacatggcgaggcgg 66881 Query: 300 gcgtgcttgatctcc 314 ||| |||||||||| Sbjct: 66880 ccgttcttgatctcc 66866
>dbj|AP005700.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBb0085I16 Length = 141701 Score = 46.1 bits (23), Expect = 0.14 Identities = 62/75 (82%) Strand = Plus / Minus Query: 240 cccttgccggtggcggcggcctgcacggcgaagccgaggaaggcgaccatggcgaggcgg 299 |||||||||||| || |||||| ||| |||||||| | || || ||||||||||||| Sbjct: 130312 cccttgccggtgacgatggcctggacgaagaagccgaacatggagaacatggcgaggcgg 130253 Query: 300 gcgtgcttgatctcc 314 ||| |||||||||| Sbjct: 130252 ccgttcttgatctcc 130238
>emb|X63205.1|ZMCAB48 Zea mays cab48 gene for chlorophyll a/b binding protein precursor Length = 2780 Score = 46.1 bits (23), Expect = 0.14 Identities = 62/75 (82%) Strand = Plus / Minus Query: 240 cccttgccggtggcggcggcctgcacggcgaagccgaggaaggcgaccatggcgaggcgg 299 |||||||||||| || ||||||||| |||||||| | || || ||||||||||||| Sbjct: 2633 cccttgccggtgacgatagcctgcacgaagaagccgaacatggagaacatggcgaggcgg 2574 Query: 300 gcgtgcttgatctcc 314 ||| |||||||||| Sbjct: 2573 ccgttcttgatctcc 2559
>dbj|AB115771.1| Physcomitrella patens subsp. patens PpLhcb1 gene for light-harvesting chlorophyll a/b-binding protein 1, complete cds Length = 1975 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 591 cgagcatggcccagcggccgtggatga 617 ||||||||||||||||| ||||||||| Sbjct: 1376 cgagcatggcccagcgggcgtggatga 1350
>dbj|AK121563.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033034J10, full insert sequence Length = 1180 Score = 46.1 bits (23), Expect = 0.14 Identities = 62/75 (82%) Strand = Plus / Minus Query: 240 cccttgccggtggcggcggcctgcacggcgaagccgaggaaggcgaccatggcgaggcgg 299 |||||||||||| || |||||| ||| |||||||| | || || ||||||||||||| Sbjct: 769 cccttgccggtgacgatggcctggacgaagaagccgaacatggagaacatggcgaggcgg 710 Query: 300 gcgtgcttgatctcc 314 ||| |||||||||| Sbjct: 709 ccgttcttgatctcc 695
>dbj|AK119173.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-B06, full insert sequence Length = 1126 Score = 46.1 bits (23), Expect = 0.14 Identities = 62/75 (82%) Strand = Plus / Minus Query: 240 cccttgccggtggcggcggcctgcacggcgaagccgaggaaggcgaccatggcgaggcgg 299 |||||||||||| || |||||| ||| |||||||| | || || ||||||||||||| Sbjct: 768 cccttgccggtgacgatggcctggacgaagaagccgaacatggagaacatggcgaggcgg 709 Query: 300 gcgtgcttgatctcc 314 ||| |||||||||| Sbjct: 708 ccgttcttgatctcc 694
>dbj|AB050007.2| Chlamydomonas reinhardtii lhcb5 mRNA for CP26, complete cds Length = 952 Score = 46.1 bits (23), Expect = 0.14 Identities = 44/51 (86%) Strand = Plus / Minus Query: 264 acggcgaagccgaggaaggcgaccatggcgaggcgggcgtgcttgatctcc 314 ||||||||||| || | || ||||||||| |||||| ||| |||||||||| Sbjct: 798 acggcgaagcccagcacggagaccatggccaggcggccgttcttgatctcc 748
>emb|X13909.1|OSCABR2 Rice cab2R gene for light harvesting chlorophyll a/b-binding protein Length = 1442 Score = 46.1 bits (23), Expect = 0.14 Identities = 62/75 (82%) Strand = Plus / Minus Query: 240 cccttgccggtggcggcggcctgcacggcgaagccgaggaaggcgaccatggcgaggcgg 299 |||||||||||| || |||||| ||| |||||||| | || || ||||||||||||| Sbjct: 1198 cccttgccggtgacgatggcctggacgaagaagccgaacatggagaacatggcgaggcgg 1139 Query: 300 gcgtgcttgatctcc 314 ||| |||||||||| Sbjct: 1138 ccgttcttgatctcc 1124
>emb|Z22782.1|MSCHLABA M.squamata chlorophyll a/b binding protein mRNA Length = 900 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 591 cgagcatggcccagcggccgtggatga 617 ||||||| ||||||||||||||||||| Sbjct: 248 cgagcatagcccagcggccgtggatga 222
>emb|X69524.1|MSCABC1 M.squamata cabc1 mRNA for chlorophyll a/b/c binding protein precursor Length = 882 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 591 cgagcatggcccagcggccgtggatga 617 ||||||| ||||||||||||||||||| Sbjct: 278 cgagcatagcccagcggccgtggatga 252
>emb|X73540.1|MSLHC13 M.squamata Lhc1*3 mRNA for chlorophyll a/b/c binding precursor Length = 829 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 591 cgagcatggcccagcggccgtggatga 617 ||||||| ||||||||||||||||||| Sbjct: 197 cgagcatagcccagcggccgtggatga 171
>emb|X73539.1|MSLHC14 M.squamata Lhc1*4 mRNA for chlorophyll a/b/c binding precursor Length = 903 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 591 cgagcatggcccagcggccgtggatga 617 ||||||| ||||||||||||||||||| Sbjct: 235 cgagcatagcccagcggccgtggatga 209
>dbj|AK104350.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-G02, full insert sequence Length = 1013 Score = 46.1 bits (23), Expect = 0.14 Identities = 62/75 (82%) Strand = Plus / Minus Query: 240 cccttgccggtggcggcggcctgcacggcgaagccgaggaaggcgaccatggcgaggcgg 299 |||||||||||| || |||||| ||| |||||||| | || || ||||||||||||| Sbjct: 762 cccttgccggtgacgatggcctggacgaagaagccgaacatggagaacatggcgaggcgg 703 Query: 300 gcgtgcttgatctcc 314 ||| |||||||||| Sbjct: 702 ccgttcttgatctcc 688
>dbj|AK104288.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-E05, full insert sequence Length = 1021 Score = 46.1 bits (23), Expect = 0.14 Identities = 62/75 (82%) Strand = Plus / Minus Query: 240 cccttgccggtggcggcggcctgcacggcgaagccgaggaaggcgaccatggcgaggcgg 299 |||||||||||| || |||||| ||| |||||||| | || || ||||||||||||| Sbjct: 767 cccttgccggtgacgatggcctggacgaagaagccgaacatggagaacatggcgaggcgg 708 Query: 300 gcgtgcttgatctcc 314 ||| |||||||||| Sbjct: 707 ccgttcttgatctcc 693
>dbj|AK104281.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-006-D01, full insert sequence Length = 1056 Score = 46.1 bits (23), Expect = 0.14 Identities = 62/75 (82%) Strand = Plus / Minus Query: 240 cccttgccggtggcggcggcctgcacggcgaagccgaggaaggcgaccatggcgaggcgg 299 |||||||||||| || |||||| ||| |||||||| | || || ||||||||||||| Sbjct: 769 cccttgccggtgacgatggcctggacgaagaagccgaacatggagaacatggcgaggcgg 710 Query: 300 gcgtgcttgatctcc 314 ||| |||||||||| Sbjct: 709 ccgttcttgatctcc 695
>dbj|AK060851.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-E08, full insert sequence Length = 1235 Score = 46.1 bits (23), Expect = 0.14 Identities = 62/75 (82%) Strand = Plus / Minus Query: 240 cccttgccggtggcggcggcctgcacggcgaagccgaggaaggcgaccatggcgaggcgg 299 |||||||||||| || |||||| ||| |||||||| | || || ||||||||||||| Sbjct: 767 cccttgccggtgacgatggcctggacgaagaagccgaacatggagaacatggcgaggcgg 708 Query: 300 gcgtgcttgatctcc 314 ||| |||||||||| Sbjct: 707 ccgttcttgatctcc 693
>dbj|AK058305.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-H02, full insert sequence Length = 1045 Score = 46.1 bits (23), Expect = 0.14 Identities = 62/75 (82%) Strand = Plus / Minus Query: 240 cccttgccggtggcggcggcctgcacggcgaagccgaggaaggcgaccatggcgaggcgg 299 |||||||||||| || |||||| ||| |||||||| | || || ||||||||||||| Sbjct: 767 cccttgccggtgacgatggcctggacgaagaagccgaacatggagaacatggcgaggcgg 708 Query: 300 gcgtgcttgatctcc 314 ||| |||||||||| Sbjct: 707 ccgttcttgatctcc 693
>gb|L15738.1|MNTCPCABBP Mantoniella squamata chloroplast photosynthetic light-harvesting protein mRNA, complete cds Length = 900 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 591 cgagcatggcccagcggccgtggatga 617 ||||||| ||||||||||||||||||| Sbjct: 248 cgagcatagcccagcggccgtggatga 222
>dbj|AB051210.1| Chlamydomonas reinhardtii mRNA for light-harvesting chlorophyll-a/b binding protein LhcII-4, complete cds Length = 988 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 591 cgagcatggcccagcggccgtggatgagctc 621 ||||||||||||||||| ||||||| ||||| Sbjct: 302 cgagcatggcccagcgggcgtggatcagctc 272
>dbj|AB051209.1| Chlamydomonas reinhardtii mRNA for light-harvesting chlorophyll-a/b binding protein LhcII-3, complete cds Length = 1256 Score = 46.1 bits (23), Expect = 0.14 Identities = 35/39 (89%) Strand = Plus / Minus Query: 593 agcatggcccagcggccgtggatgagctcgcactcgcgg 631 ||||||||||||||| ||||||| ||||| |||||||| Sbjct: 312 agcatggcccagcgggcgtggatcagctccaactcgcgg 274
>dbj|AB051206.1| Chlamydomonas reinhardtii gene for light-harvesting chlorophyll-a/b binding protein LhcII-4, complete cds Length = 1781 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 591 cgagcatggcccagcggccgtggatgagctc 621 ||||||||||||||||| ||||||| ||||| Sbjct: 791 cgagcatggcccagcgggcgtggatcagctc 761
>dbj|AB051205.1| Chlamydomonas reinhardtii gene for light-harvesting chlorophyll-a/b binding protein LhcII-3, complete cds Length = 1508 Score = 46.1 bits (23), Expect = 0.14 Identities = 35/39 (89%) Strand = Plus / Minus Query: 593 agcatggcccagcggccgtggatgagctcgcactcgcgg 631 ||||||||||||||| ||||||| ||||| |||||||| Sbjct: 760 agcatggcccagcgggcgtggatcagctccaactcgcgg 722
>gb|AY646197.1| Chlorella pyrenoidosa chloroplast light-harvesting complex II (Lhc II) mRNA, partial cds; nuclear gene for chloroplast product Length = 537 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Minus Query: 593 agcatggcccagcggccgtggatgagctcg 622 ||||||||||||||| ||||||||| |||| Sbjct: 77 agcatggcccagcgggcgtggatgacctcg 48
>gb|AF110786.1|AF110786 Volvox carteri f. nagariensis clone G18 light harvesting complex a protein (lhca) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 1047 Score = 44.1 bits (22), Expect = 0.55 Identities = 40/46 (86%) Strand = Plus / Minus Query: 269 gaagccgaggaaggcgaccatggcgaggcgggcgtgcttgatctcc 314 |||||||||||| || |||||||| || ||| ||| |||||||||| Sbjct: 670 gaagccgaggaaagcaaccatggccagacggccgttcttgatctcc 625
>ref|XM_480317.1| Oryza sativa (japonica cultivar-group), mRNA Length = 444 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 252 gcggcggcctgcacggcgaag 272 ||||||||||||||||||||| Sbjct: 47 gcggcggcctgcacggcgaag 67
>gb|AY954742.1| Ostreococcus tauri chloroplast prasinophyte chlorophyll a/b-binding protein Lhcp2.3 gene, complete cds; nuclear gene for chloroplast product Length = 1066 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 591 cgagcatggcccagcggccgtggat 615 ||||||| ||||||||||||||||| Sbjct: 575 cgagcatcgcccagcggccgtggat 551
>gb|AY954741.1| Ostreococcus tauri chloroplast prasinophyte chlorophyll a/b-binding protein Lhcp2.2 gene, complete cds; nuclear gene for chloroplast product Length = 1158 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 591 cgagcatggcccagcggccgtggat 615 ||||||| ||||||||||||||||| Sbjct: 667 cgagcatcgcccagcggccgtggat 643
>gb|AY954733.1| Ostreococcus tauri chloroplast prasinophyte chlorophyll a/b-binding protein Lhcp2.1 gene, complete cds; nuclear gene for chloroplast product Length = 1144 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 591 cgagcatggcccagcggccgtggat 615 ||||||| ||||||||||||||||| Sbjct: 653 cgagcatcgcccagcggccgtggat 629
>gb|AY954730.1| Ostreococcus tauri chloroplast prasinophyte chlorophyll a/b-binding protein Lhcp2.4 gene, partial cds; nuclear gene for chloroplast product Length = 636 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 591 cgagcatggcccagcggccgtggat 615 ||||||| ||||||||||||||||| Sbjct: 145 cgagcatcgcccagcggccgtggat 121
>emb|X13908.1|OSCABR1 Rice cab1R gene for light harvesting chlorophyll a/b-binding protein Length = 1664 Score = 42.1 bits (21), Expect = 2.2 Identities = 60/73 (82%) Strand = Plus / Minus Query: 240 cccttgccggtggcggcggcctgcacggcgaagccgaggaaggcgaccatggcgaggcgg 299 |||||||||||| || |||||| ||| |||||||| | || || ||||||||||||| Sbjct: 1159 cccttgccggtgacgatggcctggacgaagaagccgaacatggagaacatggcgaggcgg 1100 Query: 300 gcgtgcttgatct 312 ||| |||||||| Sbjct: 1099 ccgttcttgatct 1087
>gb|AY245372.1| Iris fulva clone LFR3-3 IRRE retrotransposon, partial sequence Length = 3850 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 205 ggtcgctgaggtgggtggccc 225 ||||||||||||||||||||| Sbjct: 2333 ggtcgctgaggtgggtggccc 2353
>emb|BX572597.1| Rhodopseudomonas palustris CGA009 complete genome; segment 5/16 Length = 349737 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 267 gcgaagccgaggaaggcgacc 287 ||||||||||||||||||||| Sbjct: 254108 gcgaagccgaggaaggcgacc 254088
>gb|DQ118587.1| Isochrysis galbana isolate 53 chloroplast light harvesting protein isoform 15 mRNA, complete cds; nuclear gene for chloroplast product Length = 697 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Minus Query: 274 cgaggaaggcgaccatggcgaggcgggcgtgct 306 |||||||||| | ||||||||||||| |||||| Sbjct: 517 cgaggaaggcaatcatggcgaggcggccgtgct 485
>gb|AF479777.1| Chlamydomonas reinhardtii major light-harvesting complex II protein m10 (Lhcbm10) mRNA, complete cds Length = 1077 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 593 agcatggcccagcggccgtggatgagctc 621 ||||||||||||||| ||||||| ||||| Sbjct: 314 agcatggcccagcgggcgtggatcagctc 286
>gb|DQ122900.1| Chlamydomonas incerta chloroplast light-harvesting chlorophyll-a/b binding protein (LhcII-1.3) mRNA, complete cds; nuclear gene for chloroplast product Length = 1100 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 593 agcatggcccagcggccgtggatgagctc 621 ||||||||||||||| ||||||| ||||| Sbjct: 308 agcatggcccagcgggcgtggatcagctc 280
>emb|BX323857.16| Mouse DNA sequence from clone RP23-12C2 on chromosome 4, complete sequence Length = 104942 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 393 ctcctctccgggtccagctcc 413 ||||||||||||||||||||| Sbjct: 12636 ctcctctccgggtccagctcc 12656
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 267 gcgaagccgaggaaggcgacc 287 ||||||||||||||||||||| Sbjct: 4606821 gcgaagccgaggaaggcgacc 4606841
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 252 gcggcggcctgcacggcgaag 272 ||||||||||||||||||||| Sbjct: 4290927 gcggcggcctgcacggcgaag 4290947
>gb|AF330793.1|AF330793 Chlamydomonas reinhardtii light-harvesting complex II protein precursor (cabII-2) mRNA, complete cds Length = 1068 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 593 agcatggcccagcggccgtggatgagctc 621 ||||||||||||||| ||||||| ||||| Sbjct: 296 agcatggcccagcgggcgtggatcagctc 268
>gb|AY995800.1| Synthetic construct codon optimized envelope protein (env) gene, complete cds Length = 2655 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 244 tgccggtggcggcggcctgca 264 ||||||||||||||||||||| Sbjct: 2524 tgccggtggcggcggcctgca 2504
>dbj|AP005164.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0054L03 Length = 183623 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 252 gcggcggcctgcacggcgaag 272 ||||||||||||||||||||| Sbjct: 53721 gcggcggcctgcacggcgaag 53741
>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome Length = 7215267 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 242 cttgccggtggcggcggcctg 262 ||||||||||||||||||||| Sbjct: 2347780 cttgccggtggcggcggcctg 2347800
>ref|NM_184305.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1511 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 240 cccttgccggtggcggcggc 259 |||||||||||||||||||| Sbjct: 807 cccttgccggtggcggcggc 788
>ref|NM_191799.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 798 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 287 catggcgaggcgggcgtgcttgatctcc 314 ||||||||||||| ||| |||||||||| Sbjct: 663 catggcgaggcggccgttcttgatctcc 636
>ref|XM_477163.1| Oryza sativa (japonica cultivar-group), mRNA Length = 267 Score = 40.1 bits (20), Expect = 8.6 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 95 ttcgttacacggacgcgcgttcgtccat 122 ||||||||||||||| |||||||||||| Sbjct: 27 ttcgttacacggacg-gcgttcgtccat 1
>gb|AC135596.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0032D10 map E20933S, complete sequence Length = 146118 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 267 gcgaagccgaggaaggcgac 286 |||||||||||||||||||| Sbjct: 47913 gcgaagccgaggaaggcgac 47894
>gb|AC129553.10| Mus musculus chromosome 5, clone RP24-351J24, complete sequence Length = 152414 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 209 gctgaggtgggtggcccagttgtt 232 ||||||||||||||||||| |||| Sbjct: 23315 gctgaggtgggtggcccagatgtt 23292
>gb|AY313897.1| Danio rerio ion channel NompC (nompc) mRNA, complete cds Length = 5533 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 137 gacagaaactgctcgaccaccgac 160 ||||||||||||| |||||||||| Sbjct: 4952 gacagaaactgctggaccaccgac 4929
>gb|AC126552.5| Mus musculus BAC clone RP23-342F3 from chromosome 15, complete sequence Length = 213862 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 443 caccagcacctcgatccagatgag 466 |||||||||||| ||||||||||| Sbjct: 111247 caccagcacctctatccagatgag 111224
>ref|XM_765286.1| Giardia lamblia ATCC 50803 hypothetical protein (GLP_70_11537_9429) partial mRNA Length = 2109 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 316 ccagctgcagagtctccttc 335 |||||||||||||||||||| Sbjct: 1993 ccagctgcagagtctccttc 1974
>gb|AY337214.1| Uncultured sulfate-reducing bacterium clone W306505 dissimilatory sulfite reductase subunits alpha and beta (dsrAB) gene, partial sequence Length = 1412 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 517 ccagctccaccttgcccggc 536 |||||||||||||||||||| Sbjct: 1321 ccagctccaccttgcccggc 1302
>gb|AY337213.1| Uncultured sulfate-reducing bacterium clone W301300 dissimilatory sulfite reductase subunits alpha and beta (dsrAB) gene, partial sequence Length = 1379 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 517 ccagctccaccttgcccggc 536 |||||||||||||||||||| Sbjct: 1321 ccagctccaccttgcccggc 1302
>gb|AY337212.1| Uncultured sulfate-reducing bacterium clone W301179 dissimilatory sulfite reductase subunits alpha and beta (dsrAB) gene, partial sequence Length = 1379 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 517 ccagctccaccttgcccggc 536 |||||||||||||||||||| Sbjct: 1321 ccagctccaccttgcccggc 1302
>emb|Y16952.3|AME16952 Amycolatopsis balhimycina biosynthetic gene cluster for balhimycin, strain DSM 5908 Length = 66669 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 248 ggtggcggcggcctgcacggcgaa 271 |||||||||||||||| ||||||| Sbjct: 14787 ggtggcggcggcctgcgcggcgaa 14764
>emb|BX842653.1| Bdellovibrio bacteriovorus complete genome, strain HD100; segment 8/11 Length = 347636 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 82 aaaccaaagcacgttcgtta 101 |||||||||||||||||||| Sbjct: 227818 aaaccaaagcacgttcgtta 227837
>dbj|AP008232.1| Sodalis glossinidius str. 'morsitans' DNA, complete genome Length = 4171146 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 275 gaggaaggcgaccatggcga 294 |||||||||||||||||||| Sbjct: 1512096 gaggaaggcgaccatggcga 1512115
>gb|AY100470.1| Oryza sativa (indica cultivar-group) putative soluble starch synthase IV-1 gene, complete cds Length = 15000 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 287 catggcgaggcgggcgtgcttgatctcc 314 ||||||||||||| ||| |||||||||| Sbjct: 14011 catggcgaggcggccgttcttgatctcc 14038
>gb|AY273820.1| Porphyra yezoensis cytosolic glyceraldehyde 3-phosphate dehydrogenase (GAPC) mRNA, complete cds Length = 1596 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 510 ccgtccaccagctccaccttgccc 533 |||||||||| ||||||||||||| Sbjct: 497 ccgtccaccacctccaccttgccc 474
>gb|DQ409057.1| Latrodectus hesperus major ampullate spidroin 1 (MaSp1) mRNA, partial cds Length = 3317 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 517 ccagctccaccttgcccggc 536 |||||||||||||||||||| Sbjct: 750 ccagctccaccttgcccggc 731
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 283 cgaccatggcgaggcgggcg 302 |||||||||||||||||||| Sbjct: 2838327 cgaccatggcgaggcgggcg 2838346
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 552 gccggtgagccactcgacgg 571 |||||||||||||||||||| Sbjct: 828754 gccggtgagccactcgacgg 828773
>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome Length = 3570858 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 581 ccgagggtggcgagcatggc 600 |||||||||||||||||||| Sbjct: 2670814 ccgagggtggcgagcatggc 2670795
>gb|AF268322.1|AF268322 Guillardia theta light-harvesting complex protein LHCC4 mRNA, partial cds Length = 715 Score = 40.1 bits (20), Expect = 8.6 Identities = 32/36 (88%) Strand = Plus / Minus Query: 278 gaaggcgaccatggcgaggcgggcgtgcttgatctc 313 |||||||| |||||||| ||| ||||||||||||| Sbjct: 301 gaaggcgagcatggcgatacggccgtgcttgatctc 266
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 289 tggcgaggcgggcgtgcttg 308 |||||||||||||||||||| Sbjct: 23588915 tggcgaggcgggcgtgcttg 23588934
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 267 gcgaagccgaggaaggcgac 286 |||||||||||||||||||| Sbjct: 10424067 gcgaagccgaggaaggcgac 10424048
>dbj|AP003292.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0690B02 Length = 153116 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 287 catggcgaggcgggcgtgcttgatctcc 314 ||||||||||||| ||| |||||||||| Sbjct: 20990 catggcgaggcggccgttcttgatctcc 20963
>ref|NM_204787.1| Gallus gallus proteoglycan (PG-M), mRNA Length = 12307 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 125 tgcagctgagctgacagaaactgc 148 |||||| ||||||||||||||||| Sbjct: 7500 tgcagcagagctgacagaaactgc 7523
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 tggcggcggcctgcacggcg 269 |||||||||||||||||||| Sbjct: 879231 tggcggcggcctgcacggcg 879212
>dbj|AP002913.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0480E02 Length = 141862 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 240 cccttgccggtggcggcggc 259 |||||||||||||||||||| Sbjct: 123195 cccttgccggtggcggcggc 123176
>dbj|AB163432.1| Bifidobacterium animalis oxc gene for oxalyl-CoA decarboxylase, complete cds Length = 3060 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 262 gcacggcgaagccgaggaag 281 |||||||||||||||||||| Sbjct: 3046 gcacggcgaagccgaggaag 3027
>dbj|AP005764.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0016A21 Length = 144076 Score = 40.1 bits (20), Expect = 8.6 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 95 ttcgttacacggacgcgcgttcgtccat 122 ||||||||||||||| |||||||||||| Sbjct: 49030 ttcgttacacggacg-gcgttcgtccat 49056
>dbj|AK104176.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-C12, full insert sequence Length = 1055 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 287 catggcgaggcgggcgtgcttgatctcc 314 ||||||||||||| ||| |||||||||| Sbjct: 744 catggcgaggcggccgttcttgatctcc 717
>dbj|AK103946.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-B02, full insert sequence Length = 1055 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 287 catggcgaggcgggcgtgcttgatctcc 314 ||||||||||||| ||| |||||||||| Sbjct: 744 catggcgaggcggccgttcttgatctcc 717
>dbj|AK065008.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001E21, full insert sequence Length = 1512 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 240 cccttgccggtggcggcggc 259 |||||||||||||||||||| Sbjct: 807 cccttgccggtggcggcggc 788
>dbj|AK062725.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-106-D08, full insert sequence Length = 1057 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 287 catggcgaggcgggcgtgcttgatctcc 314 ||||||||||||| ||| |||||||||| Sbjct: 746 catggcgaggcggccgttcttgatctcc 719
>dbj|AK061619.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-E02, full insert sequence Length = 650 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 287 catggcgaggcgggcgtgcttgatctcc 314 ||||||||||||| ||| |||||||||| Sbjct: 251 catggcgaggcggccgttcttgatctcc 224
>dbj|AK058289.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-E06, full insert sequence Length = 1057 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 287 catggcgaggcgggcgtgcttgatctcc 314 ||||||||||||| ||| |||||||||| Sbjct: 746 catggcgaggcggccgttcttgatctcc 719
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 469 tggtgatcgtgaacggcagc 488 |||||||||||||||||||| Sbjct: 2140893 tggtgatcgtgaacggcagc 2140874
>ref|NM_183349.1| Danio rerio transient receptor potential cation channel, subfamily N, member 1 (trpn1), mRNA Length = 5533 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 137 gacagaaactgctcgaccaccgac 160 ||||||||||||| |||||||||| Sbjct: 4952 gacagaaactgctggaccaccgac 4929
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 267 gcgaagccgaggaaggcgac 286 |||||||||||||||||||| Sbjct: 10495611 gcgaagccgaggaaggcgac 10495592
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 289 tggcgaggcgggcgtgcttg 308 |||||||||||||||||||| Sbjct: 23517106 tggcgaggcgggcgtgcttg 23517125
>emb|AL772425.7|CNS08CA3 Oryza sativa chromosome 12, . BAC OJ1396_C02 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 157690 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 289 tggcgaggcgggcgtgcttg 308 |||||||||||||||||||| Sbjct: 117495 tggcgaggcgggcgtgcttg 117476
>gb|AC126939.5| Mus musculus BAC clone RP23-62M8 from 13, complete sequence Length = 236514 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 321 tgcagagtctccttcttctc 340 |||||||||||||||||||| Sbjct: 154683 tgcagagtctccttcttctc 154702
>gb|U74295.1|OSU74295 Oryza sativa chlorophyll a/b binding protein (kcdl895) mRNA, complete cds Length = 1022 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 287 catggcgaggcgggcgtgcttgatctcc 314 ||||||||||||| ||| |||||||||| Sbjct: 705 catggcgaggcggccgttcttgatctcc 678
>gb|L42623.1|HRSHMCI Equus caballus (clone pcDNACG2) MHC class I mRNA, complete cds Length = 1516 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 312 tccgccagctgcagagtctccttc 335 ||||| |||||||||||||||||| Sbjct: 624 tccgcgagctgcagagtctccttc 601
>gb|AC133110.2| Homo sapiens BAC clone RP11-761N10 from 4, complete sequence Length = 59902 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 211 tgaggtgggtggcccagttg 230 |||||||||||||||||||| Sbjct: 9918 tgaggtgggtggcccagttg 9899
>dbj|D13542.1|CHKPRGL Chicken mRNA for proteoglycan, complete cds Length = 12307 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 125 tgcagctgagctgacagaaactgc 148 |||||| ||||||||||||||||| Sbjct: 7500 tgcagcagagctgacagaaactgc 7523
>dbj|AB071600.1| Oryza sativa (japonica cultivar-group) gene for transcription factor OsRS2, complete cds, cultivar:Nipponbare Length = 6510 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 289 tggcgaggcgggcgtgcttg 308 |||||||||||||||||||| Sbjct: 5715 tggcgaggcgggcgtgcttg 5696
>dbj|AB064519.1| Oryza sativa (japonica cultivar-group) OsRS2 mRNA for transcription factor rough sheath 2 like protein, complete cds Length = 1512 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 289 tggcgaggcgggcgtgcttg 308 |||||||||||||||||||| Sbjct: 1195 tggcgaggcgggcgtgcttg 1176 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,377,806 Number of Sequences: 3902068 Number of extensions: 4377806 Number of successful extensions: 123918 Number of sequences better than 10.0: 248 Number of HSP's better than 10.0 without gapping: 246 Number of HSP's successfully gapped in prelim test: 5 Number of HSP's that attempted gapping in prelim test: 121518 Number of HSP's gapped (non-prelim): 2297 length of query: 634 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 611 effective length of database: 17,143,297,704 effective search space: 10474554897144 effective search space used: 10474554897144 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
