Clone Information

BLAST Search Result

Clone Name	rbasd16e13
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	CD48A_ARATH (P54609) Cell division control protein 48 homolog A ...	147	2e-35
2	CD48E_ARATH (Q9LZF6) Cell division control protein 48 homolog E ...	143	3e-34
3	CD48D_ARATH (Q9SCN8) Putative cell division control protein 48 h...	140	2e-33
4	CDC48_SOYBN (P54774) Cell division cycle protein 48 homolog (Val...	136	3e-32
5	CDC48_CAPAN (Q96372) Cell division cycle protein 48 homolog	136	3e-32
6	TERA_RAT (P46462) Transitional endoplasmic reticulum ATPase (TER...	117	2e-26
7	TERA_PIG (P03974) Transitional endoplasmic reticulum ATPase (TER...	117	2e-26
8	TERA_MOUSE (Q01853) Transitional endoplasmic reticulum ATPase (T...	117	2e-26
9	TERA_HUMAN (P55072) Transitional endoplasmic reticulum ATPase (T...	117	2e-26
10	TERA_XENLA (P23787) Transitional endoplasmic reticulum ATPase (T...	114	2e-25
11	TERA1_CAEEL (P54811) Transitional endoplasmic reticulum ATPase h...	109	5e-24
12	TERA2_CAEEL (P54812) Transitional endoplasmic reticulum ATPase h...	107	3e-23
13	CDC48_SCHPO (Q9P3A7) Cell division cycle protein 48	77	3e-14
14	CDC48_YEAST (P25694) Cell division control protein 48	73	4e-13
15	CDAT_PLAF7 (P46468) Putative cell division cycle ATPase	49	6e-06
16	Y1297_ARCFU (O28972) Cell division cycle protein 48 homolog AF1297	48	2e-05
17	KTNA1_HUMAN (O75449) Katanin p60 ATPase-containing subunit A1 (E...	41	0.002
18	KTNA1_STRPU (O61577) Katanin p60 ATPase-containing subunit (EC 3...	41	0.002
19	CD48C_ARATH (Q9SS94) Cell division control protein 48 homolog C ...	41	0.002
20	PSMR_METKA (Q8TX03) Proteasome-activating nucleotidase (Proteaso...	40	0.005
21	Y1156_METJA (Q58556) Cell division cycle protein 48 homolog MJ1156	39	0.007
22	KTNA1_RAT (Q6E0V2) Katanin p60 ATPase-containing subunit A1 (EC ...	39	0.009
23	KTNA1_MOUSE (Q9WV86) Katanin p60 ATPase-containing subunit A1 (E...	39	0.009
24	PSMR_ARCFU (O28303) Proteasome-activating nucleotidase (Proteaso...	39	0.011
25	VAT_THEAC (O05209) VCP-like ATPase	38	0.015
26	PSMR_AERPE (Q9YAC7) Proteasome-activating nucleotidase (Proteaso...	37	0.026
27	KTNA1_XENLA (Q9PUL2) Katanin p60 ATPase-containing subunit (EC 3...	37	0.044
28	SAV_SULAC (Q07590) SAV protein	36	0.057
29	FTSH_SHIFL (P0AAI4) Cell division protein ftsH (EC 3.4.24.-)	36	0.057
30	FTSH_SALTY (P63343) Cell division protease ftsH (EC 3.4.24.-)	36	0.057
31	FTSH_SALTI (P63344) Cell division protease ftsH (EC 3.4.24.-)	36	0.057
32	FTSH_ECOLI (P0AAI3) Cell division protein ftsH (EC 3.4.24.-)	36	0.057
33	FTSH_ECO57 (Q8X9L0) Cell division protease ftsH (EC 3.4.24.-)	36	0.057
34	PSMR_METTH (O26824) Proteasome-activating nucleotidase (Proteaso...	36	0.057
35	KATL1_RAT (Q5XIK7) Katanin p60 ATPase-containing subunit A-like ...	36	0.057
36	KATL1_HUMAN (Q9BW62) Katanin p60 ATPase-containing subunit A-lik...	36	0.057
37	PSMR_METMA (Q8PY58) Proteasome-activating nucleotidase (Proteaso...	36	0.074
38	FTSH_BUCAI (P57462) Cell division protein ftsH (EC 3.4.24.-)	35	0.097
39	KTNA1_ARATH (Q9SEX2) Katanin p60 ATPase-containing subunit (EC 3...	35	0.13
40	KATL1_MOUSE (Q8K0T4) Katanin p60 ATPase-containing subunit A-lik...	35	0.13
41	PSMR_METAC (Q8TI88) Proteasome-activating nucleotidase (Proteaso...	35	0.13
42	FTSH_STRR6 (P59652) Cell division protein ftsH homolog (EC 3.4.2...	34	0.22
43	FTSH_STRPN (O69076) Cell division protein ftsH homolog (EC 3.4.2...	34	0.22
44	CDCH_HALSA (Q9HPF0) Protein cdcH	34	0.28
45	FTSH_BUCAP (Q8K9G8) Cell division protein ftsH (EC 3.4.24.-)	34	0.28
46	FTSH_TREPA (O83746) Cell division protein ftsH homolog (EC 3.4.2...	34	0.28
47	FTSH_AQUAE (O67077) Cell division protein ftsH homolog (EC 3.4.2...	33	0.37
48	PSMR_SULSO (Q980M1) Proteasome-activating nucleotidase (Proteaso...	33	0.37
49	ATD1B_BRARE (Q503W7) ATPase family AAA domain-containing protein...	33	0.37
50	PRS10_SPETR (P62335) 26S protease regulatory subunit S10B (Prote...	33	0.37
51	PRS10_MOUSE (P62334) 26S protease regulatory subunit S10B (Prote...	33	0.37
52	PRS10_HUMAN (P62333) 26S protease regulatory subunit S10B (Prote...	33	0.37
53	SPAST_MOUSE (Q9QYY8) Spastin	33	0.48
54	SPAST_HUMAN (Q9UBP0) Spastin	33	0.48
55	FTSH_HELFE (O32617) Cell division protein ftsH homolog (EC 3.4.2...	33	0.63
56	ATD1A_BRARE (Q7ZZ25) ATPase family AAA domain-containing protein...	33	0.63
57	FTSH_CAPAN (Q39444) Cell division protein ftsH homolog, chloropl...	32	0.82
58	FTSH_MYCTU (P0A4V8) Cell division protein ftsH homolog (EC 3.4.2...	32	0.82
59	FTSH_MYCBO (P0A4V9) Cell division protein ftsH homolog (EC 3.4.2...	32	0.82
60	FTSH_MYCLE (Q9CD58) Cell division protein ftsH homolog (EC 3.4.2...	32	0.82
61	PRS10_CAEEL (O17071) Probable 26S protease regulatory subunit S1...	32	1.1
62	PSMR_PYRHO (O57940) Proteasome-activating nucleotidase (Proteaso...	32	1.1
63	PSMR_METJA (Q58576) Proteasome-activating nucleotidase (Proteaso...	32	1.1
64	FTSH4_SYNY3 (P72991) Cell division protein ftsH homolog 4 (EC 3....	32	1.1
65	FTSH1_HAEIN (P71377) Cell division protein ftsH homolog 1 (EC 3....	32	1.1
66	FTSH_ODOSI (P49825) Cell division protein ftsH homolog (EC 3.4.2...	32	1.1
67	AFG2_YEAST (P32794) Protein AFG2	32	1.1
68	PEX1_YEAST (P24004) Peroxisome biosynthesis protein PAS1 (Peroxi...	32	1.1
69	MSP1_YEAST (P28737) Protein MSP1 (TAT-binding homolog 4)	32	1.1
70	MEI1_CAEEL (P34808) Meiotic spindle formation protein mei-1 (EC ...	32	1.1
71	FTSH2_HAEIN (P45219) Cell division protein ftsH homolog 2 (EC 3....	32	1.1
72	UBP42_HUMAN (Q9H9J4) Ubiquitin carboxyl-terminal hydrolase 42 (E...	32	1.4
73	PSMR_PYRAB (Q9V287) Proteasome-activating nucleotidase (Proteaso...	31	1.8
74	SEC18_CANAL (P34732) Vesicular-fusion protein SEC18	31	1.8
75	FTSH_LACLA (P46469) Cell division protein ftsH homolog (EC 3.4.2...	31	1.8
76	FTSH_BUCBP (Q89AF2) Cell division protein ftsH (EC 3.4.24.-)	31	1.8
77	SPG7_HUMAN (Q9UQ90) Paraplegin (EC 3.4.24.-) (Spastic paraplegia...	31	1.8
78	FTSH_MEDSA (Q9BAE0) Cell division protein ftsH homolog, chloropl...	31	2.4
79	AFG31_MOUSE (Q920A7) AFG3-like protein 1 (EC 3.4.24.-)	31	2.4
80	ATAD1_RAT (Q505J9) ATPase family AAA domain-containing protein 1	31	2.4
81	ATAD1_MOUSE (Q9D5T0) ATPase family AAA domain-containing protein 1	31	2.4
82	ATAD1_HUMAN (Q8NBU5) ATPase family AAA domain-containing protein 1	31	2.4
83	FTSH_BACPF (P94304) Cell division protein ftsH homolog (EC 3.4.2...	31	2.4
84	PSMR_PYRKO (Q5JHS5) Proteasome-activating nucleotidase (Proteaso...	30	3.1
85	AF3G2_MOUSE (Q8JZQ2) AFG3-like protein 2 (EC 3.4.24.-)	30	3.1
86	FTSH1_ARATH (Q39102) Cell division protein ftsH homolog 1, chlor...	30	3.1
87	SEC18_SCHPO (Q9P7Q4) Vesicular-fusion protein SEC18 homolog	30	3.1
88	PEX1_HUMAN (O43933) Peroxisome biogenesis factor 1 (Peroxin-1) (...	30	3.1
89	AFG32_HUMAN (Q9Y4W6) AFG3-like protein 2 (EC 3.4.24.-) (Parapleg...	30	3.1
90	FTSH_TOBAC (O82150) Cell division protein ftsH homolog, chloropl...	30	5.3
91	CX017_HUMAN (Q9NX05) Protein CXorf17 (Tumor antigen BJ-HCC-21)	30	5.3
92	TBP6_YEAST (P40328) Probable 26S protease subunit YTA6 (TAT-bind...	30	5.3
93	FTSH2_SYNY3 (P73179) Cell division protein ftsH homolog 2 (EC 3....	29	7.0
94	NSF_ARATH (Q9M0Y8) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular...	29	7.0
95	FTSH_BACSU (P37476) Cell division protein ftsH homolog (EC 3.4.2...	29	7.0
96	FTSH2_ARATH (Q9FH02) Cell division protein ftsH homolog 2, chlor...	29	7.0
97	FTSH1_SYNY3 (Q55700) Cell division protein ftsH homolog 1 (EC 3....	29	7.0
98	CAPU_DROME (Q24120) Protein cappuccino	29	7.0
99	FTSH_CYACA (O19922) Cell division protein ftsH homolog (EC 3.4.2...	29	9.1
100	PRS8_YEAST (Q01939) 26S protease regulatory subunit 8 homolog (S...	29	9.1
101	RCA1_YEAST (P40341) Mitochondrial respiratory chain complexes as...	29	9.1
102	VPS5_SCHPO (Q9C0U7) Vacuolar protein sorting-associated protein ...	29	9.1
103	PSMR_SULTO (Q975U2) Proteasome-activating nucleotidase (Proteaso...	29	9.1
104	PSMR_PYRFU (Q8U4H3) Proteasome-activating nucleotidase (Proteaso...	29	9.1
105	PRS8_SCHPO (P41836) 26S protease regulatory subunit 8 homolog (P...	29	9.1

>CD48A_ARATH (P54609) Cell division control protein 48 homolog A (AtCDC48a)|
          Length = 809

 Score =  147 bits (370), Expect = 2e-35
 Identities = 77/111 (69%), Positives = 82/111 (73%)
 Frame = -1

Query: 527  APLAKDIDLSALAKYTQGFSGADITEICQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXX 348
            +P+AKD+D+ ALAKYTQGFSGADITEICQRACKYAI                NP      
Sbjct: 668  SPIAKDVDIGALAKYTQGFSGADITEICQRACKYAIRENIEKDIEKEKRRSENPEAMEED 727

Query: 347  XXXXXXEIRAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRF 195
                  EI+AAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRF
Sbjct: 728  GVDEVSEIKAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRF 778



 Score = 33.9 bits (76), Expect = 0.28
 Identities = 14/34 (41%), Positives = 21/34 (61%)
 Frame = -1

Query: 521 LAKDIDLSALAKYTQGFSGADITEICQRACKYAI 420
           LA+D+DL  ++K T G+ GAD+  +C  A    I
Sbjct: 393 LAEDVDLERISKDTHGYVGADLAALCTEAALQCI 426

to top

>CD48E_ARATH (Q9LZF6) Cell division control protein 48 homolog E (AtCDC48e)|
            (Transitional endoplasmic reticulum ATPase E)
          Length = 810

 Score =  143 bits (360), Expect = 3e-34
 Identities = 77/112 (68%), Positives = 82/112 (73%), Gaps = 1/112 (0%)
 Frame = -1

Query: 527  APLAKDIDLSALAKYTQGFSGADITEICQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXX 348
            +P+AKD+D++ALAKYTQGFSGADITEICQRACKYAI                NP      
Sbjct: 667  SPVAKDVDVTALAKYTQGFSGADITEICQRACKYAIRENIEKDIENERRRSQNPEAMEED 726

Query: 347  XXXXXXE-IRAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRF 195
                    IRAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRF
Sbjct: 727  MVDDEVSEIRAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRF 778



 Score = 33.9 bits (76), Expect = 0.28
 Identities = 14/34 (41%), Positives = 21/34 (61%)
 Frame = -1

Query: 521 LAKDIDLSALAKYTQGFSGADITEICQRACKYAI 420
           LA+D+DL  ++K T G+ GAD+  +C  A    I
Sbjct: 393 LAEDVDLERISKDTHGYVGADLAALCTEAALQCI 426

to top

>CD48D_ARATH (Q9SCN8) Putative cell division control protein 48 homolog D|
           (AtCDC48d) (Transitional endoplasmic reticulum ATPase D)
          Length = 815

 Score =  140 bits (353), Expect = 2e-33
 Identities = 74/111 (66%), Positives = 80/111 (72%)
 Frame = -1

Query: 527 APLAKDIDLSALAKYTQGFSGADITEICQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXX 348
           +P+AKD+DL ALAKYTQGFSGADITEICQR+CKYAI                +P      
Sbjct: 668 SPVAKDVDLRALAKYTQGFSGADITEICQRSCKYAIRENIEKDIEKERKRAESPEAMEED 727

Query: 347 XXXXXXEIRAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRF 195
                  I+A HFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRF
Sbjct: 728 EEEIAE-IKAGHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRF 777



 Score = 33.5 bits (75), Expect = 0.37
 Identities = 14/34 (41%), Positives = 21/34 (61%)
 Frame = -1

Query: 521 LAKDIDLSALAKYTQGFSGADITEICQRACKYAI 420
           LA+D+DL  ++K T G+ GAD+  +C  A    I
Sbjct: 394 LAEDVDLERVSKDTHGYVGADLAALCTEAALQCI 427

to top

>CDC48_SOYBN (P54774) Cell division cycle protein 48 homolog (Valosin-containing|
            protein homolog) (VCP)
          Length = 807

 Score =  136 bits (343), Expect = 3e-32
 Identities = 73/112 (65%), Positives = 81/112 (72%), Gaps = 1/112 (0%)
 Frame = -1

Query: 527  APLAKDIDLSALAKYTQGFSGADITEICQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXX 348
            +P+AK++DL ALA++TQGFSGADITEICQRACKYAI                NP      
Sbjct: 668  SPIAKNVDLRALARHTQGFSGADITEICQRACKYAIRENIEKDIERERKSRENPEAMDED 727

Query: 347  XXXXXXE-IRAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRF 195
                    I+AAHFEESMK+ARRSVSDADIRKYQAFAQTLQQSRGFGSEFRF
Sbjct: 728  TVDDEVAEIKAAHFEESMKFARRSVSDADIRKYQAFAQTLQQSRGFGSEFRF 779



 Score = 33.1 bits (74), Expect = 0.48
 Identities = 14/34 (41%), Positives = 20/34 (58%)
 Frame = -1

Query: 521 LAKDIDLSALAKYTQGFSGADITEICQRACKYAI 420
           L+ D+DL  +AK T G+ GAD+  +C  A    I
Sbjct: 394 LSDDVDLERIAKDTHGYVGADLAALCTEAALQCI 427

to top

>CDC48_CAPAN (Q96372) Cell division cycle protein 48 homolog|
          Length = 805

 Score =  136 bits (343), Expect = 3e-32
 Identities = 74/111 (66%), Positives = 80/111 (72%)
 Frame = -1

Query: 527 APLAKDIDLSALAKYTQGFSGADITEICQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXX 348
           +PL+KDIDL ALAK+TQGFSGAD+TEICQRACKYAI                NP      
Sbjct: 668 SPLSKDIDLRALAKHTQGFSGADVTEICQRACKYAIRENIEKDIEREKRRQENPDSMDED 727

Query: 347 XXXXXXEIRAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRF 195
                  I+ AHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFG+EFRF
Sbjct: 728 VDEVPE-IKPAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGTEFRF 777



 Score = 32.3 bits (72), Expect = 0.82
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = -1

Query: 521 LAKDIDLSALAKYTQGFSGADITEICQRACKYAI 420
           LA+++DL  ++K T G+ GAD+  +C  A    I
Sbjct: 394 LAEEVDLERISKDTHGYVGADLAALCTEAALQCI 427

to top

>TERA_RAT (P46462) Transitional endoplasmic reticulum ATPase (TER ATPase)|
           (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing
           protein) (VCP)
          Length = 805

 Score =  117 bits (293), Expect = 2e-26
 Identities = 65/111 (58%), Positives = 73/111 (65%)
 Frame = -1

Query: 527 APLAKDIDLSALAKYTQGFSGADITEICQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXX 348
           +P+AKD+DL  LAK T GFSGAD+TEICQRACK AI                NP      
Sbjct: 663 SPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRERERQTNPSAMEVE 722

Query: 347 XXXXXXEIRAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRF 195
                 EIR  HFEE+M++ARRSVSD DIRKY+ FAQTLQQSRGFGS FRF
Sbjct: 723 EDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGS-FRF 772



 Score = 32.7 bits (73), Expect = 0.63
 Identities = 15/34 (44%), Positives = 19/34 (55%)
 Frame = -1

Query: 521 LAKDIDLSALAKYTQGFSGADITEICQRACKYAI 420
           LA D+DL  +A  T G  GAD+  +C  A   AI
Sbjct: 389 LADDVDLEQVANETHGHVGADLAALCSEAALQAI 422

to top

>TERA_PIG (P03974) Transitional endoplasmic reticulum ATPase (TER ATPase)|
           (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing
           protein) (VCP)
          Length = 805

 Score =  117 bits (293), Expect = 2e-26
 Identities = 65/111 (58%), Positives = 73/111 (65%)
 Frame = -1

Query: 527 APLAKDIDLSALAKYTQGFSGADITEICQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXX 348
           +P+AKD+DL  LAK T GFSGAD+TEICQRACK AI                NP      
Sbjct: 663 SPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRERERQTNPSAMEVE 722

Query: 347 XXXXXXEIRAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRF 195
                 EIR  HFEE+M++ARRSVSD DIRKY+ FAQTLQQSRGFGS FRF
Sbjct: 723 EDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGS-FRF 772



 Score = 32.7 bits (73), Expect = 0.63
 Identities = 15/34 (44%), Positives = 19/34 (55%)
 Frame = -1

Query: 521 LAKDIDLSALAKYTQGFSGADITEICQRACKYAI 420
           LA D+DL  +A  T G  GAD+  +C  A   AI
Sbjct: 389 LADDVDLEQVANETHGHVGADLAALCSEAALQAI 422

to top

>TERA_MOUSE (Q01853) Transitional endoplasmic reticulum ATPase (TER ATPase)|
           (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing
           protein) (VCP)
          Length = 805

 Score =  117 bits (293), Expect = 2e-26
 Identities = 65/111 (58%), Positives = 73/111 (65%)
 Frame = -1

Query: 527 APLAKDIDLSALAKYTQGFSGADITEICQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXX 348
           +P+AKD+DL  LAK T GFSGAD+TEICQRACK AI                NP      
Sbjct: 663 SPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRERERQTNPSAMEVE 722

Query: 347 XXXXXXEIRAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRF 195
                 EIR  HFEE+M++ARRSVSD DIRKY+ FAQTLQQSRGFGS FRF
Sbjct: 723 EDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGS-FRF 772



 Score = 32.7 bits (73), Expect = 0.63
 Identities = 15/34 (44%), Positives = 19/34 (55%)
 Frame = -1

Query: 521 LAKDIDLSALAKYTQGFSGADITEICQRACKYAI 420
           LA D+DL  +A  T G  GAD+  +C  A   AI
Sbjct: 389 LADDVDLEQVANETHGHVGADLAALCSEAALQAI 422

to top

>TERA_HUMAN (P55072) Transitional endoplasmic reticulum ATPase (TER ATPase)|
           (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing
           protein) (VCP)
          Length = 805

 Score =  117 bits (293), Expect = 2e-26
 Identities = 65/111 (58%), Positives = 73/111 (65%)
 Frame = -1

Query: 527 APLAKDIDLSALAKYTQGFSGADITEICQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXX 348
           +P+AKD+DL  LAK T GFSGAD+TEICQRACK AI                NP      
Sbjct: 663 SPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRERERQTNPSAMEVE 722

Query: 347 XXXXXXEIRAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRF 195
                 EIR  HFEE+M++ARRSVSD DIRKY+ FAQTLQQSRGFGS FRF
Sbjct: 723 EDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGS-FRF 772



 Score = 32.7 bits (73), Expect = 0.63
 Identities = 15/34 (44%), Positives = 19/34 (55%)
 Frame = -1

Query: 521 LAKDIDLSALAKYTQGFSGADITEICQRACKYAI 420
           LA D+DL  +A  T G  GAD+  +C  A   AI
Sbjct: 389 LADDVDLEQVANETHGHVGADLAALCSEAALQAI 422

to top

>TERA_XENLA (P23787) Transitional endoplasmic reticulum ATPase (TER ATPase)|
           (15S Mg(2+)-ATPase p97 subunit)
          Length = 805

 Score =  114 bits (285), Expect = 2e-25
 Identities = 64/111 (57%), Positives = 72/111 (64%)
 Frame = -1

Query: 527 APLAKDIDLSALAKYTQGFSGADITEICQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXX 348
           +P+AKD+D+  LAK T GFSGAD+TEICQRACK AI                NP      
Sbjct: 664 SPVAKDVDVDFLAKMTNGFSGADLTEICQRACKLAIRESIENEIRRERDRQTNPSAMEVE 723

Query: 347 XXXXXXEIRAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRF 195
                 EIR  HFEE+M+ ARRSVSD DIRKY+ FAQTLQQSRGFGS FRF
Sbjct: 724 EDDPVPEIRRDHFEEAMRLARRSVSDNDIRKYEMFAQTLQQSRGFGS-FRF 773



 Score = 31.6 bits (70), Expect = 1.4
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = -1

Query: 521 LAKDIDLSALAKYTQGFSGADITEICQRACKYAI 420
           L+ D+DL  +A  T G  GAD+  +C  A   AI
Sbjct: 390 LSDDVDLEQVANETHGHVGADLAALCSEAALQAI 423

to top

>TERA1_CAEEL (P54811) Transitional endoplasmic reticulum ATPase homolog 1|
            (p97/CDC48 homolog 1)
          Length = 809

 Score =  109 bits (272), Expect = 5e-24
 Identities = 60/114 (52%), Positives = 71/114 (62%), Gaps = 4/114 (3%)
 Frame = -1

Query: 524  PLAKDIDLSALAKYTQGFSGADITEICQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXXX 345
            PL+KD+DL+ LAK T GFSGAD+TEICQRACK AI                         
Sbjct: 672  PLSKDLDLTFLAKNTVGFSGADLTEICQRACKLAIRESIEKEIRIEKERQDRQARGEELM 731

Query: 344  XXXXXE----IRAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRF 195
                 +    I  AHFEE+MK+ARRSV+D DIRKY+ FAQTLQQSRGFG+ F+F
Sbjct: 732  EDDAVDPVPEITRAHFEEAMKFARRSVTDNDIRKYEMFAQTLQQSRGFGNNFKF 785



 Score = 32.0 bits (71), Expect = 1.1
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = -1

Query: 521 LAKDIDLSALAKYTQGFSGADITEICQRA 435
           LA D+DL  +A    GF GAD+  +C  A
Sbjct: 396 LADDVDLEQIANECHGFVGADLASLCSEA 424

to top

>TERA2_CAEEL (P54812) Transitional endoplasmic reticulum ATPase homolog 2|
            (p97/CDC48 homolog 2)
          Length = 810

 Score =  107 bits (266), Expect = 3e-23
 Identities = 59/114 (51%), Positives = 70/114 (61%), Gaps = 4/114 (3%)
 Frame = -1

Query: 524  PLAKDIDLSALAKYTQGFSGADITEICQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXXX 345
            PL+ D+DL+ LAK T GFSGAD+TEICQRACK AI                         
Sbjct: 670  PLSADLDLNFLAKNTVGFSGADLTEICQRACKLAIRESIEREIRQEKERQDRSARGEELM 729

Query: 344  XXXXXE----IRAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRF 195
                 +    I  AHFEE+MK+ARRSV+D DIRKY+ FAQTLQQSRGFG+ F+F
Sbjct: 730  EDELADPVPEITRAHFEEAMKFARRSVTDNDIRKYEMFAQTLQQSRGFGNNFKF 783



 Score = 30.8 bits (68), Expect = 2.4
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = -1

Query: 521 LAKDIDLSALAKYTQGFSGADITEICQRA 435
           L +D+DL  +A    GF GAD+  +C  A
Sbjct: 395 LGEDVDLEQVANECHGFVGADLASLCSEA 423

to top

>CDC48_SCHPO (Q9P3A7) Cell division cycle protein 48|
          Length = 815

 Score = 77.0 bits (188), Expect = 3e-14
 Identities = 43/104 (41%), Positives = 57/104 (54%), Gaps = 1/104 (0%)
 Frame = -1

Query: 524 PLAKDIDLSALAKYTQGFSGADITEICQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXXX 345
           P+A+D+DL A+AK T GFSGAD+  + QRA K AI                 P       
Sbjct: 684 PVAEDVDLRAVAKATHGFSGADLEFVVQRAVKLAIKDSIEEDIKRENETGEAPADDVVMD 743

Query: 344 XXXXXE-IRAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRG 216
                  ++  H EE+MK ARRSVSDA++R+Y+A+A  L  SRG
Sbjct: 744 EDASVSQVQRHHVEEAMKMARRSVSDAEVRRYEAYAHQLLTSRG 787



 Score = 32.0 bits (71), Expect = 1.1
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = -1

Query: 521 LAKDIDLSALAKYTQGFSGADITEICQRACKYAI 420
           LA D+DL  +A  T G+ G+D+  +C  A    I
Sbjct: 410 LADDVDLEQIAAETHGYVGSDLASLCSEAAMQQI 443

to top

>CDC48_YEAST (P25694) Cell division control protein 48|
          Length = 835

 Score = 73.2 bits (178), Expect = 4e-13
 Identities = 45/122 (36%), Positives = 61/122 (50%), Gaps = 12/122 (9%)
 Frame = -1

Query: 524  PLAKDIDLSALAKYTQGFSGADITEICQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXXX 345
            PL   ++L+A+AK TQGFSGAD+  I QRA KYAI                         
Sbjct: 675  PLEPGLELTAIAKATQGFSGADLLYIVQRAAKYAIKDSIEAHRQHEAEKEVKVEGEDVEM 734

Query: 344  XXXXXE------------IRAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEF 201
                 +            I   HF E+MK A+RSVSDA++R+Y+A++Q ++ SRG  S F
Sbjct: 735  TDEGAKAEQEPEVDPVPYITKEHFAEAMKTAKRSVSDAELRRYEAYSQQMKASRGQFSNF 794

Query: 200  RF 195
             F
Sbjct: 795  NF 796



 Score = 36.6 bits (83), Expect = 0.044
 Identities = 17/34 (50%), Positives = 20/34 (58%)
 Frame = -1

Query: 521 LAKDIDLSALAKYTQGFSGADITEICQRACKYAI 420
           LA D+DL ALA  T G+ GADI  +C  A    I
Sbjct: 400 LADDVDLEALAAETHGYVGADIASLCSEAAMQQI 433

to top

>CDAT_PLAF7 (P46468) Putative cell division cycle ATPase|
          Length = 1229

 Score = 49.3 bits (116), Expect = 6e-06
 Identities = 31/105 (29%), Positives = 44/105 (41%), Gaps = 7/105 (6%)
 Frame = -1

Query: 524  PLAKDIDLSALAKYTQGFSGADITEICQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXXX 345
            PL +D+D+  +AK T+GFSGADIT +CQ A   AI                         
Sbjct: 1120 PLNEDVDIHDMAKRTEGFSGADITNLCQSAVNEAIKETIHLLNIRKKEQEEQRKKNKNSF 1179

Query: 344  XXXXX-------EIRAAHFEESMKYARRSVSDADIRKYQAFAQTL 231
                         +   HF+ + K AR S+   D+ KY+ F + L
Sbjct: 1180 KIDDTDTYDPVPTLSKKHFDLAFKNARISIQPEDVLKYEKFKEKL 1224

to top

>Y1297_ARCFU (O28972) Cell division cycle protein 48 homolog AF1297|
          Length = 733

 Score = 47.8 bits (112), Expect = 2e-05
 Identities = 28/92 (30%), Positives = 43/92 (46%)
 Frame = -1

Query: 524 PLAKDIDLSALAKYTQGFSGADITEICQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXXX 345
           PLA D+++  LA+ T+G+SGADI  +C+ A   AI                         
Sbjct: 641 PLADDVNIEELAEKTEGYSGADIEAVCREAGMLAIRELIKPGM----------TREEAKE 690

Query: 344 XXXXXEIRAAHFEESMKYARRSVSDADIRKYQ 249
                +I   HFEE++K  R S++  D+ KY+
Sbjct: 691 AAKKLKITKKHFEEALKKVRPSLTKEDVEKYE 722



 Score = 41.6 bits (96), Expect = 0.001
 Identities = 17/35 (48%), Positives = 25/35 (71%)
 Frame = -1

Query: 524 PLAKDIDLSALAKYTQGFSGADITEICQRACKYAI 420
           PLA+D+DL  LA+ T GF GAD+  +C+ A  +A+
Sbjct: 367 PLAEDVDLEELAELTNGFVGADLEALCKEAAMHAL 401

to top

>KTNA1_HUMAN (O75449) Katanin p60 ATPase-containing subunit A1 (EC 3.6.4.3)|
           (Katanin p60 subunit A1) (p60 katanin)
          Length = 491

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 26/91 (28%), Positives = 41/91 (45%)
 Frame = -1

Query: 521 LAKDIDLSALAKYTQGFSGADITEICQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXXXX 342
           LA D+DL+++A+  +G+SGADIT +C+ A   A+                          
Sbjct: 400 LADDVDLASIAENMEGYSGADITNVCRDASLMAMRRRIEGLTPEEIRNLSKEEMHMPTT- 458

Query: 341 XXXXEIRAAHFEESMKYARRSVSDADIRKYQ 249
                     FE ++K   +SVS ADI +Y+
Sbjct: 459 -------MEDFEMALKKVSKSVSAADIERYE 482

to top

>KTNA1_STRPU (O61577) Katanin p60 ATPase-containing subunit (EC 3.6.4.3)|
           (Katanin p60 subunit) (p60 katanin)
          Length = 516

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 18/35 (51%), Positives = 25/35 (71%)
 Frame = -1

Query: 524 PLAKDIDLSALAKYTQGFSGADITEICQRACKYAI 420
           PLA DIDL ++A+   G+SGADIT +C+ A   A+
Sbjct: 424 PLADDIDLKSIAEKMDGYSGADITNVCRDASMMAM 458

to top

>CD48C_ARATH (Q9SS94) Cell division control protein 48 homolog C (AtCDC48c)|
          Length = 820

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 28/108 (25%), Positives = 45/108 (41%), Gaps = 1/108 (0%)
 Frame = -1

Query: 524  PLAKDIDLSALAKYT-QGFSGADITEICQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXX 348
            P+   +DL  +AK   +GFSGAD+  + Q+A   A+                +       
Sbjct: 712  PIDPSVDLDGIAKNNCEGFSGADLAHLVQKATFQAV----------EEMIGSSESSEDDV 761

Query: 347  XXXXXXEIRAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSE 204
                   I+  HFE+++     SV+    R Y A +  LQ+S G  +E
Sbjct: 762  TDITQCTIKTRHFEQALSLVSPSVNKQQRRHYDALSTKLQESVGRNTE 809

to top

>PSMR_METKA (Q8TX03) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 436

 Score = 39.7 bits (91), Expect = 0.005
 Identities = 20/34 (58%), Positives = 23/34 (67%)
 Frame = -1

Query: 521 LAKDIDLSALAKYTQGFSGADITEICQRACKYAI 420
           LA+D+DL  LAK T+G SGADI  IC  A   AI
Sbjct: 368 LAEDVDLQKLAKITEGASGADIKAICTEAGMMAI 401

to top

>Y1156_METJA (Q58556) Cell division cycle protein 48 homolog MJ1156|
          Length = 903

 Score = 39.3 bits (90), Expect = 0.007
 Identities = 17/35 (48%), Positives = 23/35 (65%)
 Frame = -1

Query: 524 PLAKDIDLSALAKYTQGFSGADITEICQRACKYAI 420
           PLA+D+DL  LA  T GF GAD+  +C+ A   A+
Sbjct: 364 PLAEDVDLDYLADVTHGFVGADLAALCKEAAMRAL 398



 Score = 38.9 bits (89), Expect = 0.009
 Identities = 16/34 (47%), Positives = 25/34 (73%)
 Frame = -1

Query: 521 LAKDIDLSALAKYTQGFSGADITEICQRACKYAI 420
           LA+D++L  LAK T+G++GADI  +C+ A   A+
Sbjct: 639 LAEDVNLEELAKKTEGYTGADIEALCREAAMLAV 672

to top

>KTNA1_RAT (Q6E0V2) Katanin p60 ATPase-containing subunit A1 (EC 3.6.4.3)|
           (Katanin p60 subunit A1) (p60 katanin)
          Length = 491

 Score = 38.9 bits (89), Expect = 0.009
 Identities = 25/91 (27%), Positives = 41/91 (45%)
 Frame = -1

Query: 521 LAKDIDLSALAKYTQGFSGADITEICQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXXXX 342
           LA D++L+++A+  +G+SGADIT +C+ A   A+                          
Sbjct: 400 LADDVNLASIAENMEGYSGADITNVCRDASLMAMRRRIEGLTPEEIRNLSREEMHMPTT- 458

Query: 341 XXXXEIRAAHFEESMKYARRSVSDADIRKYQ 249
                     FE ++K   +SVS ADI +Y+
Sbjct: 459 -------MEDFEMALKKVSKSVSAADIERYE 482

to top

>KTNA1_MOUSE (Q9WV86) Katanin p60 ATPase-containing subunit A1 (EC 3.6.4.3)|
           (Katanin p60 subunit A1) (p60 katanin) (Lipotransin)
          Length = 491

 Score = 38.9 bits (89), Expect = 0.009
 Identities = 25/91 (27%), Positives = 41/91 (45%)
 Frame = -1

Query: 521 LAKDIDLSALAKYTQGFSGADITEICQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXXXX 342
           LA D++L+++A+  +G+SGADIT +C+ A   A+                          
Sbjct: 400 LADDVNLASIAENMEGYSGADITNVCRDASLMAMRRRIEGLTPEEIRNLSREAMHMPTT- 458

Query: 341 XXXXEIRAAHFEESMKYARRSVSDADIRKYQ 249
                     FE ++K   +SVS ADI +Y+
Sbjct: 459 -------MEDFEMALKKISKSVSAADIERYE 482

to top

>PSMR_ARCFU (O28303) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 398

 Score = 38.5 bits (88), Expect = 0.011
 Identities = 18/34 (52%), Positives = 23/34 (67%)
 Frame = -1

Query: 521 LAKDIDLSALAKYTQGFSGADITEICQRACKYAI 420
           LA+D+D   LA+ T+G SGADI  IC  A  +AI
Sbjct: 330 LAEDVDFKELARITEGASGADIKAICTEAGMFAI 363

to top

>VAT_THEAC (O05209) VCP-like ATPase|
          Length = 745

 Score = 38.1 bits (87), Expect = 0.015
 Identities = 24/101 (23%), Positives = 45/101 (44%)
 Frame = -1

Query: 524 PLAKDIDLSALAKYTQGFSGADITEICQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXXX 345
           PLA D+DL+ +A+ T+G+ GAD+  +C+ A   A                          
Sbjct: 653 PLAPDVDLNDIAQRTEGYVGADLENLCREAGMNA-----------------------YRE 689

Query: 344 XXXXXEIRAAHFEESMKYARRSVSDADIRKYQAFAQTLQQS 222
                 +   +F +++K  R SV +  I+ Y+  ++T+ +S
Sbjct: 690 NPDATSVSQKNFLDALKTIRPSVDEEVIKFYRTLSETMSKS 730

to top

>PSMR_AERPE (Q9YAC7) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 409

 Score = 37.4 bits (85), Expect = 0.026
 Identities = 18/36 (50%), Positives = 24/36 (66%)
 Frame = -1

Query: 527 APLAKDIDLSALAKYTQGFSGADITEICQRACKYAI 420
           A +A D+DL A+AK T+GFSGAD+  +   A   AI
Sbjct: 326 AKMAPDVDLEAIAKLTEGFSGADLKAVVVEAGYNAI 361

to top

>KTNA1_XENLA (Q9PUL2) Katanin p60 ATPase-containing subunit (EC 3.6.4.3)|
           (Katanin p60 subunit) (p60 katanin) (Fragment)
          Length = 486

 Score = 36.6 bits (83), Expect = 0.044
 Identities = 24/91 (26%), Positives = 38/91 (41%)
 Frame = -1

Query: 521 LAKDIDLSALAKYTQGFSGADITEICQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXXXX 342
           LA D+++  +A+   G+SGADIT +C+ A   A+                          
Sbjct: 397 LADDVNIECIAENMDGYSGADITNVCRDASLMAMRRRIEGLTPEEIRNLSRDDMHMPTT- 455

Query: 341 XXXXEIRAAHFEESMKYARRSVSDADIRKYQ 249
                     FE ++K   +SVS +DI KY+
Sbjct: 456 -------MEDFEMALKKVSKSVSASDIEKYE 479

to top

>SAV_SULAC (Q07590) SAV protein|
          Length = 780

 Score = 36.2 bits (82), Expect = 0.057
 Identities = 14/35 (40%), Positives = 23/35 (65%)
 Frame = -1

Query: 524 PLAKDIDLSALAKYTQGFSGADITEICQRACKYAI 420
           P+  D+DL  LA+ T G++GAD+  + + A  YA+
Sbjct: 397 PITDDVDLDKLAEMTYGYTGADLAALAKEAAIYAL 431



 Score = 35.0 bits (79), Expect = 0.13
 Identities = 21/106 (19%), Positives = 48/106 (45%), Gaps = 5/106 (4%)
 Frame = -1

Query: 524 PLAKDIDLSALAKYTQGFSGADITEICQRACKYAIXXXXX-----XXXXXXXXXXXNPXX 360
           PLA+D+ L  +A+  +G++GAD+  + + A   A+                         
Sbjct: 673 PLAEDVSLEDIAEKAEGYTGADLEALVREATINAMRSIYSMCDKQSRDECKGNMECYQKH 732

Query: 359 XXXXXXXXXXEIRAAHFEESMKYARRSVSDADIRKYQAFAQTLQQS 222
                     ++    FE+++   + S++ ADI++Y+ F++ L+++
Sbjct: 733 IKECMNKTSFKVSKEDFEKALNVVKASLTQADIQRYERFSKELKRA 778

to top

>FTSH_SHIFL (P0AAI4) Cell division protein ftsH (EC 3.4.24.-)|
          Length = 644

 Score = 36.2 bits (82), Expect = 0.057
 Identities = 16/34 (47%), Positives = 22/34 (64%)
 Frame = -1

Query: 524 PLAKDIDLSALAKYTQGFSGADITEICQRACKYA 423
           PLA DID + +A+ T GFSGAD+  +   A  +A
Sbjct: 339 PLAPDIDAAIIARGTPGFSGADLANLVNEAALFA 372

to top

>FTSH_SALTY (P63343) Cell division protease ftsH (EC 3.4.24.-)|
          Length = 644

 Score = 36.2 bits (82), Expect = 0.057
 Identities = 16/34 (47%), Positives = 22/34 (64%)
 Frame = -1

Query: 524 PLAKDIDLSALAKYTQGFSGADITEICQRACKYA 423
           PLA DID + +A+ T GFSGAD+  +   A  +A
Sbjct: 339 PLATDIDAAIIARGTPGFSGADLANLVNEAALFA 372

to top

>FTSH_SALTI (P63344) Cell division protease ftsH (EC 3.4.24.-)|
          Length = 644

 Score = 36.2 bits (82), Expect = 0.057
 Identities = 16/34 (47%), Positives = 22/34 (64%)
 Frame = -1

Query: 524 PLAKDIDLSALAKYTQGFSGADITEICQRACKYA 423
           PLA DID + +A+ T GFSGAD+  +   A  +A
Sbjct: 339 PLATDIDAAIIARGTPGFSGADLANLVNEAALFA 372

to top

>FTSH_ECOLI (P0AAI3) Cell division protein ftsH (EC 3.4.24.-)|
          Length = 644

 Score = 36.2 bits (82), Expect = 0.057
 Identities = 16/34 (47%), Positives = 22/34 (64%)
 Frame = -1

Query: 524 PLAKDIDLSALAKYTQGFSGADITEICQRACKYA 423
           PLA DID + +A+ T GFSGAD+  +   A  +A
Sbjct: 339 PLAPDIDAAIIARGTPGFSGADLANLVNEAALFA 372

to top

>FTSH_ECO57 (Q8X9L0) Cell division protease ftsH (EC 3.4.24.-)|
          Length = 644

 Score = 36.2 bits (82), Expect = 0.057
 Identities = 16/34 (47%), Positives = 22/34 (64%)
 Frame = -1

Query: 524 PLAKDIDLSALAKYTQGFSGADITEICQRACKYA 423
           PLA DID + +A+ T GFSGAD+  +   A  +A
Sbjct: 339 PLAPDIDAAIIARGTPGFSGADLANLVNEAALFA 372

to top

>PSMR_METTH (O26824) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 410

 Score = 36.2 bits (82), Expect = 0.057
 Identities = 16/34 (47%), Positives = 23/34 (67%)
 Frame = -1

Query: 521 LAKDIDLSALAKYTQGFSGADITEICQRACKYAI 420
           LA+++D+  LA+ T G SGAD+  IC  A  +AI
Sbjct: 340 LAEEVDIELLARITDGASGADLKAICTEAGMFAI 373

to top

>KATL1_RAT (Q5XIK7) Katanin p60 ATPase-containing subunit A-like 1 (EC|
           3.6.4.3) (Katanin p60 subunit A-like 1) (p60
           katanin-like 1)
          Length = 488

 Score = 36.2 bits (82), Expect = 0.057
 Identities = 26/91 (28%), Positives = 38/91 (41%)
 Frame = -1

Query: 521 LAKDIDLSALAKYTQGFSGADITEICQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXXXX 342
           L  DI L  +A+ T+G+SGADIT IC+ A   A+                          
Sbjct: 397 LDPDIHLEDIAEKTEGYSGADITNICRDASLMAM--------RRRINGLSPEEIRALSKE 448

Query: 341 XXXXEIRAAHFEESMKYARRSVSDADIRKYQ 249
                +     E ++K   +SVS AD+ KY+
Sbjct: 449 ELQMPVTRGDLELALKKIAKSVSAADLEKYE 479

to top

>KATL1_HUMAN (Q9BW62) Katanin p60 ATPase-containing subunit A-like 1 (EC|
           3.6.4.3) (Katanin p60 subunit A-like 1) (p60
           katanin-like 1)
          Length = 490

 Score = 36.2 bits (82), Expect = 0.057
 Identities = 25/91 (27%), Positives = 38/91 (41%)
 Frame = -1

Query: 521 LAKDIDLSALAKYTQGFSGADITEICQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXXXX 342
           L  DI L  +A+  +G+SGADIT +C+ A   A+                          
Sbjct: 399 LDPDIQLEDIAEKIEGYSGADITNVCRDASLMAM--------RRRINGLSPEEIRALSKE 450

Query: 341 XXXXEIRAAHFEESMKYARRSVSDADIRKYQ 249
                +    FE ++K   +SVS AD+ KY+
Sbjct: 451 ELQMPVTKGDFELALKKIAKSVSAADLEKYE 481

to top

>PSMR_METMA (Q8PY58) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 420

 Score = 35.8 bits (81), Expect = 0.074
 Identities = 17/34 (50%), Positives = 22/34 (64%)
 Frame = -1

Query: 521 LAKDIDLSALAKYTQGFSGADITEICQRACKYAI 420
           LA+DID   LAK T+G SGAD+  I   A  +A+
Sbjct: 348 LAEDIDFKKLAKATEGMSGADLKAIATEAGMFAV 381

to top

>FTSH_BUCAI (P57462) Cell division protein ftsH (EC 3.4.24.-)|
          Length = 611

 Score = 35.4 bits (80), Expect = 0.097
 Identities = 15/34 (44%), Positives = 22/34 (64%)
 Frame = -1

Query: 524 PLAKDIDLSALAKYTQGFSGADITEICQRACKYA 423
           PL+KD+D   +A+ T GFSGAD+  +   A  +A
Sbjct: 339 PLSKDVDPMIIARGTPGFSGADLANLVNEAALFA 372

to top

>KTNA1_ARATH (Q9SEX2) Katanin p60 ATPase-containing subunit (EC 3.6.4.3)|
           (Katanin p60 subunit) (p60 katanin) (Atp60) (CAD ATPase)
           (Katanin 1) (BOTERO1 protein) (ECTOPIC ROOT HAIR 3
           protein) (FAT ROOT protein) (FRAGILE FIBER 2 protein)
           (AtAAA1)
          Length = 523

 Score = 35.0 bits (79), Expect = 0.13
 Identities = 20/91 (21%), Positives = 41/91 (45%)
 Frame = -1

Query: 521 LAKDIDLSALAKYTQGFSGADITEICQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXXXX 342
           +A D+++  +A+ T+G+SG D+T +C+ A    +                +         
Sbjct: 431 VASDVNIEDVARRTEGYSGDDLTNVCRDASMNGM-------RRKIAGKTRDEIKNMSKDD 483

Query: 341 XXXXEIRAAHFEESMKYARRSVSDADIRKYQ 249
                +    FEE+++  + SVS +DI K++
Sbjct: 484 ISNDPVAMCDFEEAIRKVQPSVSSSDIEKHE 514

to top

>KATL1_MOUSE (Q8K0T4) Katanin p60 ATPase-containing subunit A-like 1 (EC|
           3.6.4.3) (Katanin p60 subunit A-like 1) (p60
           katanin-like 1)
          Length = 488

 Score = 35.0 bits (79), Expect = 0.13
 Identities = 25/91 (27%), Positives = 37/91 (40%)
 Frame = -1

Query: 521 LAKDIDLSALAKYTQGFSGADITEICQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXXXX 342
           L  D+ L  +A  T+G+SGADIT IC+ A   A+                          
Sbjct: 397 LDPDVHLEDIADKTEGYSGADITNICRDASLMAM--------RRRINGLSPEEIRALSKE 448

Query: 341 XXXXEIRAAHFEESMKYARRSVSDADIRKYQ 249
                +     E ++K   +SVS AD+ KY+
Sbjct: 449 ELQMPVTRGDLELALKKIAKSVSAADLEKYE 479

to top

>PSMR_METAC (Q8TI88) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 421

 Score = 35.0 bits (79), Expect = 0.13
 Identities = 17/34 (50%), Positives = 21/34 (61%)
 Frame = -1

Query: 521 LAKDIDLSALAKYTQGFSGADITEICQRACKYAI 420
           LA DID   LAK T+G SGAD+  I   A  +A+
Sbjct: 348 LAGDIDFKKLAKVTEGMSGADLKAIATEAGMFAV 381

to top

>FTSH_STRR6 (P59652) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 652

 Score = 34.3 bits (77), Expect = 0.22
 Identities = 15/34 (44%), Positives = 21/34 (61%)
 Frame = -1

Query: 524 PLAKDIDLSALAKYTQGFSGADITEICQRACKYA 423
           PLA+D+DL  +A+ T GF GAD+  +   A   A
Sbjct: 374 PLAEDVDLKLVAQQTPGFVGADLENVLNEAALVA 407

to top

>FTSH_STRPN (O69076) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 652

 Score = 34.3 bits (77), Expect = 0.22
 Identities = 15/34 (44%), Positives = 21/34 (61%)
 Frame = -1

Query: 524 PLAKDIDLSALAKYTQGFSGADITEICQRACKYA 423
           PLA+D+DL  +A+ T GF GAD+  +   A   A
Sbjct: 374 PLAEDVDLKLVAQQTPGFVGADLENVLNEAALVA 407

to top

>CDCH_HALSA (Q9HPF0) Protein cdcH|
          Length = 742

 Score = 33.9 bits (76), Expect = 0.28
 Identities = 16/35 (45%), Positives = 22/35 (62%)
 Frame = -1

Query: 524 PLAKDIDLSALAKYTQGFSGADITEICQRACKYAI 420
           PL+ D++LS LA  T GF GADI  + + A   A+
Sbjct: 374 PLSDDVNLSTLADDTHGFVGADIESLSKEAAMRAL 408



 Score = 29.6 bits (65), Expect = 5.3
 Identities = 22/103 (21%), Positives = 39/103 (37%)
 Frame = -1

Query: 524 PLAKDIDLSALAKYTQGFSGADITEICQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXXX 345
           PLA D+ L  LA+   G+ G+D+  I + A   A+                         
Sbjct: 648 PLAADVSLRELAERADGYVGSDLANIAREAAIEAL-----------------------RD 684

Query: 344 XXXXXEIRAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRG 216
                ++  AHF  +M+  R +++D  +  Y       + S+G
Sbjct: 685 DEDADDVGMAHFRAAMENVRPTITDDLMEYYDQVEDQFKGSQG 727

to top

>FTSH_BUCAP (Q8K9G8) Cell division protein ftsH (EC 3.4.24.-)|
          Length = 613

 Score = 33.9 bits (76), Expect = 0.28
 Identities = 14/34 (41%), Positives = 22/34 (64%)
 Frame = -1

Query: 524 PLAKDIDLSALAKYTQGFSGADITEICQRACKYA 423
           PL++D+D   +A+ T GFSGAD+  +   A  +A
Sbjct: 339 PLSEDVDPMIIARGTPGFSGADLANLVNEAALFA 372

to top

>FTSH_TREPA (O83746) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 609

 Score = 33.9 bits (76), Expect = 0.28
 Identities = 14/34 (41%), Positives = 22/34 (64%)
 Frame = -1

Query: 521 LAKDIDLSALAKYTQGFSGADITEICQRACKYAI 420
           LA ++DL A+A+ T G+SGAD+  +   A   A+
Sbjct: 328 LAPEVDLKAVARITGGYSGADLANVVNEAALLAV 361

to top

>FTSH_AQUAE (O67077) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 634

 Score = 33.5 bits (75), Expect = 0.37
 Identities = 15/33 (45%), Positives = 21/33 (63%)
 Frame = -1

Query: 521 LAKDIDLSALAKYTQGFSGADITEICQRACKYA 423
           LAKD+DL  +A+ T GF+GAD+  +   A   A
Sbjct: 344 LAKDVDLEFVARATPGFTGADLENLLNEAALLA 376

to top

>PSMR_SULSO (Q980M1) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 393

 Score = 33.5 bits (75), Expect = 0.37
 Identities = 15/31 (48%), Positives = 21/31 (67%)
 Frame = -1

Query: 512 DIDLSALAKYTQGFSGADITEICQRACKYAI 420
           +I+L  L++ T+GFSGADI  +C  A   AI
Sbjct: 326 NINLELLSQLTEGFSGADIKNVCVEAAYMAI 356

to top

>ATD1B_BRARE (Q503W7) ATPase family AAA domain-containing protein 1-B|
          Length = 362

 Score = 33.5 bits (75), Expect = 0.37
 Identities = 13/25 (52%), Positives = 20/25 (80%)
 Frame = -1

Query: 509 IDLSALAKYTQGFSGADITEICQRA 435
           ++LS +AK T GFSG+D+ E+C+ A
Sbjct: 286 VELSEIAKQTDGFSGSDLREMCRDA 310

to top

>PRS10_SPETR (P62335) 26S protease regulatory subunit S10B (Proteasome subunit|
           p42) (Proteasome 26S subunit ATPase 6) (Conserved ATPase
           domain protein 44) (CADp44)
          Length = 389

 Score = 33.5 bits (75), Expect = 0.37
 Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
 Frame = -1

Query: 524 PLAK--DIDLSALAKYTQGFSGADITEICQRACKYAI 420
           P+ K  +ID  A+ K + GF+GAD+  +C  A  +AI
Sbjct: 319 PITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAI 355

to top

>PRS10_MOUSE (P62334) 26S protease regulatory subunit S10B (Proteasome subunit|
           p42) (Proteasome 26S subunit ATPase 6)
          Length = 389

 Score = 33.5 bits (75), Expect = 0.37
 Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
 Frame = -1

Query: 524 PLAK--DIDLSALAKYTQGFSGADITEICQRACKYAI 420
           P+ K  +ID  A+ K + GF+GAD+  +C  A  +AI
Sbjct: 319 PITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAI 355

to top

>PRS10_HUMAN (P62333) 26S protease regulatory subunit S10B (Proteasome subunit|
           p42) (Proteasome 26S subunit ATPase 6)
          Length = 389

 Score = 33.5 bits (75), Expect = 0.37
 Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
 Frame = -1

Query: 524 PLAK--DIDLSALAKYTQGFSGADITEICQRACKYAI 420
           P+ K  +ID  A+ K + GF+GAD+  +C  A  +AI
Sbjct: 319 PITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAI 355

to top

>SPAST_MOUSE (Q9QYY8) Spastin|
          Length = 614

 Score = 33.1 bits (74), Expect = 0.48
 Identities = 23/85 (27%), Positives = 35/85 (41%)
 Frame = -1

Query: 506 DLSALAKYTQGFSGADITEICQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXXXXXXXXE 327
           +L+ LA+ T G+SG+D+T + + A    I                 P             
Sbjct: 531 ELAQLARMTDGYSGSDLTALAKDAALGPI-------------RELKPEQVKNMSASEMRN 577

Query: 326 IRAAHFEESMKYARRSVSDADIRKY 252
           IR + F ES+K  +RSVS   +  Y
Sbjct: 578 IRLSDFTESLKKIKRSVSPQTLEAY 602

to top

>SPAST_HUMAN (Q9UBP0) Spastin|
          Length = 616

 Score = 33.1 bits (74), Expect = 0.48
 Identities = 23/85 (27%), Positives = 35/85 (41%)
 Frame = -1

Query: 506 DLSALAKYTQGFSGADITEICQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXXXXXXXXE 327
           +L+ LA+ T G+SG+D+T + + A    I                 P             
Sbjct: 533 ELAQLARMTDGYSGSDLTALAKDAALGPI-------------RELKPEQVKNMSASEMRN 579

Query: 326 IRAAHFEESMKYARRSVSDADIRKY 252
           IR + F ES+K  +RSVS   +  Y
Sbjct: 580 IRLSDFTESLKKIKRSVSPQTLEAY 604

to top

>FTSH_HELFE (O32617) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 638

 Score = 32.7 bits (73), Expect = 0.63
 Identities = 15/33 (45%), Positives = 19/33 (57%)
 Frame = -1

Query: 521 LAKDIDLSALAKYTQGFSGADITEICQRACKYA 423
           LA D+DL  +AK T G +GAD+  I   A   A
Sbjct: 366 LANDVDLQEIAKLTAGLAGADLANIINEAALLA 398

to top

>ATD1A_BRARE (Q7ZZ25) ATPase family AAA domain-containing protein 1-A|
          Length = 380

 Score = 32.7 bits (73), Expect = 0.63
 Identities = 12/34 (35%), Positives = 23/34 (67%)
 Frame = -1

Query: 521 LAKDIDLSALAKYTQGFSGADITEICQRACKYAI 420
           L+  I+L  +A  ++G+SG+D+ E+C+ A  Y +
Sbjct: 281 LSNAINLKEIASQSEGYSGSDLKELCRDAAMYRV 314

to top

>FTSH_CAPAN (Q39444) Cell division protein ftsH homolog, chloroplast precursor|
           (EC 3.4.24.-) (Fragment)
          Length = 662

 Score = 32.3 bits (72), Expect = 0.82
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = -1

Query: 521 LAKDIDLSALAKYTQGFSGADITEICQRA 435
           LAKD+D   +A+ T GF+GAD+  +   A
Sbjct: 418 LAKDVDFDKIARRTPGFTGADLQNLMNEA 446

to top

>FTSH_MYCTU (P0A4V8) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 760

 Score = 32.3 bits (72), Expect = 0.82
 Identities = 14/30 (46%), Positives = 18/30 (60%)
 Frame = -1

Query: 524 PLAKDIDLSALAKYTQGFSGADITEICQRA 435
           P+A D DL  LAK T G +GAD+  +   A
Sbjct: 350 PMAADADLDGLAKRTVGMTGADLANVINEA 379

to top

>FTSH_MYCBO (P0A4V9) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 760

 Score = 32.3 bits (72), Expect = 0.82
 Identities = 14/30 (46%), Positives = 18/30 (60%)
 Frame = -1

Query: 524 PLAKDIDLSALAKYTQGFSGADITEICQRA 435
           P+A D DL  LAK T G +GAD+  +   A
Sbjct: 350 PMAADADLDGLAKRTVGMTGADLANVINEA 379

to top

>FTSH_MYCLE (Q9CD58) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 787

 Score = 32.3 bits (72), Expect = 0.82
 Identities = 14/30 (46%), Positives = 18/30 (60%)
 Frame = -1

Query: 524 PLAKDIDLSALAKYTQGFSGADITEICQRA 435
           P+A D DL  LAK T G +GAD+  +   A
Sbjct: 350 PIADDADLDGLAKRTVGMTGADLANVVNEA 379

to top

>PRS10_CAEEL (O17071) Probable 26S protease regulatory subunit S10B (Proteasome|
           regulatory particle ATPase-like protein 4)
          Length = 406

 Score = 32.0 bits (71), Expect = 1.1
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = -1

Query: 512 DIDLSALAKYTQGFSGADITEICQRACKYAI 420
           +ID  A+ K + GFS AD+  +C  A  +AI
Sbjct: 342 EIDFEAVVKLSDGFSAADLRNVCTEAGMFAI 372

to top

>PSMR_PYRHO (O57940) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 399

 Score = 32.0 bits (71), Expect = 1.1
 Identities = 15/32 (46%), Positives = 21/32 (65%)
 Frame = -1

Query: 515 KDIDLSALAKYTQGFSGADITEICQRACKYAI 420
           K +DL A+A+ T+G SGAD+  I   A  +AI
Sbjct: 330 KGVDLRAIAEMTEGASGADLKAIATEAGMFAI 361

to top

>PSMR_METJA (Q58576) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 430

 Score = 32.0 bits (71), Expect = 1.1
 Identities = 15/34 (44%), Positives = 22/34 (64%)
 Frame = -1

Query: 521 LAKDIDLSALAKYTQGFSGADITEICQRACKYAI 420
           LA+D++L  +AK T+G  GA++  IC  A   AI
Sbjct: 359 LAEDVNLEEIAKMTEGCVGAELKAICTEAGMNAI 392

to top

>FTSH4_SYNY3 (P72991) Cell division protein ftsH homolog 4 (EC 3.4.24.-)|
          Length = 616

 Score = 32.0 bits (71), Expect = 1.1
 Identities = 12/29 (41%), Positives = 21/29 (72%)
 Frame = -1

Query: 521 LAKDIDLSALAKYTQGFSGADITEICQRA 435
           L++D+DL  +A+ T GF+GAD++ +   A
Sbjct: 349 LSQDVDLDKIARRTPGFTGADLSNLLNEA 377

to top

>FTSH1_HAEIN (P71377) Cell division protein ftsH homolog 1 (EC 3.4.24.-)|
          Length = 635

 Score = 32.0 bits (71), Expect = 1.1
 Identities = 13/33 (39%), Positives = 21/33 (63%)
 Frame = -1

Query: 521 LAKDIDLSALAKYTQGFSGADITEICQRACKYA 423
           +A+D+D   LA+ T G+SGAD+  +   A  +A
Sbjct: 339 VAQDVDAMTLARGTPGYSGADLANLVNEAALFA 371

to top

>FTSH_ODOSI (P49825) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 644

 Score = 32.0 bits (71), Expect = 1.1
 Identities = 14/30 (46%), Positives = 18/30 (60%)
 Frame = -1

Query: 524 PLAKDIDLSALAKYTQGFSGADITEICQRA 435
           PL +D+ L  LA  T GFSGAD+  +   A
Sbjct: 373 PLGEDVSLVQLANRTPGFSGADLANLLNEA 402

to top

>AFG2_YEAST (P32794) Protein AFG2|
          Length = 780

 Score = 32.0 bits (71), Expect = 1.1
 Identities = 22/90 (24%), Positives = 36/90 (40%)
 Frame = -1

Query: 509 IDLSALAKYTQGFSGADITEICQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXXXXXXXX 330
           +DL  LA  T+G+SGA++  +CQ A   AI                              
Sbjct: 707 VDLHELADRTEGYSGAEVVLLCQEAGLAAI-----------------------MEDLDVA 743

Query: 329 EIRAAHFEESMKYARRSVSDADIRKYQAFA 240
           ++   HFE++ K   R ++   +  Y+ FA
Sbjct: 744 KVELRHFEKAFKGIARGITPEMLSYYEEFA 773

to top

>PEX1_YEAST (P24004) Peroxisome biosynthesis protein PAS1 (Peroxin-1)|
          Length = 1043

 Score = 32.0 bits (71), Expect = 1.1
 Identities = 14/29 (48%), Positives = 19/29 (65%)
 Frame = -1

Query: 521 LAKDIDLSALAKYTQGFSGADITEICQRA 435
           L K+ DL  +A+ T GFSGAD+  +C  A
Sbjct: 892 LEKNADLKLIAEKTAGFSGADLQGLCYNA 920

to top

>MSP1_YEAST (P28737) Protein MSP1 (TAT-binding homolog 4)|
          Length = 362

 Score = 32.0 bits (71), Expect = 1.1
 Identities = 12/26 (46%), Positives = 19/26 (73%)
 Frame = -1

Query: 512 DIDLSALAKYTQGFSGADITEICQRA 435
           + DL  +A  T+GFSG+D+ E+C+ A
Sbjct: 280 EFDLQLIADNTKGFSGSDLKELCREA 305

to top

>MEI1_CAEEL (P34808) Meiotic spindle formation protein mei-1 (EC 3.6.4.3)|
           (Katanin ATPase-containing subunit)
          Length = 472

 Score = 32.0 bits (71), Expect = 1.1
 Identities = 13/30 (43%), Positives = 20/30 (66%)
 Frame = -1

Query: 524 PLAKDIDLSALAKYTQGFSGADITEICQRA 435
           P + +I+   LA  T+GFSGAD+  +C+ A
Sbjct: 379 PKSDEINYDDLAARTEGFSGADVVSLCRTA 408

to top

>FTSH2_HAEIN (P45219) Cell division protein ftsH homolog 2 (EC 3.4.24.-)|
          Length = 381

 Score = 32.0 bits (71), Expect = 1.1
 Identities = 13/33 (39%), Positives = 21/33 (63%)
 Frame = -1

Query: 521 LAKDIDLSALAKYTQGFSGADITEICQRACKYA 423
           +A+D+D   LA+ T G+SGAD+  +   A  +A
Sbjct: 85  VAQDVDAMTLARGTPGYSGADLANLVNEAALFA 117

to top

>UBP42_HUMAN (Q9H9J4) Ubiquitin carboxyl-terminal hydrolase 42 (EC 3.1.2.15)|
            (Ubiquitin thioesterase 42)
            (Ubiquitin-specific-processing protease 42)
            (Deubiquitinating enzyme 42)
          Length = 1325

 Score = 31.6 bits (70), Expect = 1.4
 Identities = 17/48 (35%), Positives = 23/48 (47%)
 Frame = +2

Query: 206  RSRIHETAAASGQRPGTCGCRRHSHYDAHTSSTPRSGQP*SLQPHQPR 349
            R+ +HE       R G  GC      + H  S+PR+G P +L PH  R
Sbjct: 1085 RAGLHERPHKDHNR-GRRGCEPARERERHRPSSPRAGAPHALAPHPDR 1131

to top

>PSMR_PYRAB (Q9V287) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 399

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 14/32 (43%), Positives = 21/32 (65%)
 Frame = -1

Query: 515 KDIDLSALAKYTQGFSGADITEICQRACKYAI 420
           K++DL  +A+ T+G SGAD+  I   A  +AI
Sbjct: 330 KNVDLRVIAEITEGASGADLKAIATEAGMFAI 361

to top

>SEC18_CANAL (P34732) Vesicular-fusion protein SEC18|
          Length = 794

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = -1

Query: 521 LAKDIDLSALAKYTQGFSGADITEICQRACKYAI 420
           L+ D++   L+  T+ F+GA+I  +C  A  YAI
Sbjct: 478 LSSDVNFDELSTLTKNFTGAEIEGLCNSAKSYAI 511

to top

>FTSH_LACLA (P46469) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 695

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = -1

Query: 524 PLAKDIDLSALAKYTQGFSGADITEICQRACKYA 423
           PLA D+DL  +A  T G+ GAD+  +   A   A
Sbjct: 381 PLASDVDLHNVATQTPGYVGADLENVLNEAALVA 414

to top

>FTSH_BUCBP (Q89AF2) Cell division protein ftsH (EC 3.4.24.-)|
          Length = 610

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = -1

Query: 524 PLAKDIDLSALAKYTQGFSGADITEICQRACKYA 423
           PL  ++D   +A+ T GFSGAD+  +   A  +A
Sbjct: 339 PLGNNVDPMIIARGTPGFSGADLANLVNEAALFA 372

to top

>SPG7_HUMAN (Q9UQ90) Paraplegin (EC 3.4.24.-) (Spastic paraplegia protein 7)|
          Length = 795

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 14/24 (58%), Positives = 16/24 (66%)
 Frame = -1

Query: 494 LAKYTQGFSGADITEICQRACKYA 423
           LA+ T GFSGADI  IC  A  +A
Sbjct: 509 LAELTPGFSGADIANICNEAALHA 532

to top

>FTSH_MEDSA (Q9BAE0) Cell division protein ftsH homolog, chloroplast precursor|
           (EC 3.4.24.-)
          Length = 706

 Score = 30.8 bits (68), Expect = 2.4
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = -1

Query: 521 LAKDIDLSALAKYTQGFSGADITEICQRA 435
           LAKD+D   +A+ T GF+G D+  +   A
Sbjct: 441 LAKDVDFDKIARRTPGFTGVDLQNLMNEA 469

to top

>AFG31_MOUSE (Q920A7) AFG3-like protein 1 (EC 3.4.24.-)|
          Length = 663

 Score = 30.8 bits (68), Expect = 2.4
 Identities = 15/33 (45%), Positives = 19/33 (57%)
 Frame = -1

Query: 521 LAKDIDLSALAKYTQGFSGADITEICQRACKYA 423
           L+KD     LA  T GF+GADI+ +C  A   A
Sbjct: 366 LSKDALSRKLAALTPGFTGADISNVCNEAALIA 398

to top

>ATAD1_RAT (Q505J9) ATPase family AAA domain-containing protein 1|
          Length = 361

 Score = 30.8 bits (68), Expect = 2.4
 Identities = 12/27 (44%), Positives = 20/27 (74%)
 Frame = -1

Query: 515 KDIDLSALAKYTQGFSGADITEICQRA 435
           + +DL  +A+ T GFSG+D+ E+C+ A
Sbjct: 280 RHVDLLEVAQETDGFSGSDLKEMCRDA 306

to top

>ATAD1_MOUSE (Q9D5T0) ATPase family AAA domain-containing protein 1|
          Length = 361

 Score = 30.8 bits (68), Expect = 2.4
 Identities = 12/27 (44%), Positives = 20/27 (74%)
 Frame = -1

Query: 515 KDIDLSALAKYTQGFSGADITEICQRA 435
           + +DL  +A+ T GFSG+D+ E+C+ A
Sbjct: 280 RHVDLLEVAQETDGFSGSDLKEMCRDA 306

to top

>ATAD1_HUMAN (Q8NBU5) ATPase family AAA domain-containing protein 1|
          Length = 361

 Score = 30.8 bits (68), Expect = 2.4
 Identities = 12/27 (44%), Positives = 20/27 (74%)
 Frame = -1

Query: 515 KDIDLSALAKYTQGFSGADITEICQRA 435
           + +DL  +A+ T GFSG+D+ E+C+ A
Sbjct: 280 RHVDLLEVAQETDGFSGSDLKEMCRDA 306

to top

>FTSH_BACPF (P94304) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 679

 Score = 30.8 bits (68), Expect = 2.4
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = -1

Query: 524 PLAKDIDLSALAKYTQGFSGADITEICQRACKYA 423
           PL  D++L  +A  T GFSGAD+  +   A   A
Sbjct: 353 PLNDDVNLKTIATRTPGFSGADLENLLNEAALVA 386

to top

>PSMR_PYRKO (Q5JHS5) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 397

 Score = 30.4 bits (67), Expect = 3.1
 Identities = 14/32 (43%), Positives = 20/32 (62%)
 Frame = -1

Query: 515 KDIDLSALAKYTQGFSGADITEICQRACKYAI 420
           K +DL  +A+ T+G SGAD+  I   A  +AI
Sbjct: 328 KGVDLRVIAEITEGASGADLKAIATEAGMFAI 359

to top

>AF3G2_MOUSE (Q8JZQ2) AFG3-like protein 2 (EC 3.4.24.-)|
          Length = 802

 Score = 30.4 bits (67), Expect = 3.1
 Identities = 15/33 (45%), Positives = 17/33 (51%)
 Frame = -1

Query: 521 LAKDIDLSALAKYTQGFSGADITEICQRACKYA 423
           L KD     LA  T GFSGAD+  +C  A   A
Sbjct: 499 LEKDKLARKLASLTPGFSGADVANVCNEAALIA 531

to top

>FTSH1_ARATH (Q39102) Cell division protein ftsH homolog 1, chloroplast|
           precursor (EC 3.4.24.-)
          Length = 716

 Score = 30.4 bits (67), Expect = 3.1
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = -1

Query: 521 LAKDIDLSALAKYTQGFSGADITEICQRA 435
           L KD+D   +A+ T GF+GAD+  +   A
Sbjct: 450 LGKDVDFDKVARRTPGFTGADLQNLMNEA 478

to top

>SEC18_SCHPO (Q9P7Q4) Vesicular-fusion protein SEC18 homolog|
          Length = 792

 Score = 30.4 bits (67), Expect = 3.1
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = -1

Query: 521 LAKDIDLSALAKYTQGFSGADITEICQRACKYA 423
           L  D+D+  LA  T+ FSGA+I  + + A  +A
Sbjct: 471 LENDVDMEELASLTKNFSGAEIAGLIKSASSFA 503

to top

>PEX1_HUMAN (O43933) Peroxisome biogenesis factor 1 (Peroxin-1) (Peroxisome|
            biogenesis disorder protein 1)
          Length = 1283

 Score = 30.4 bits (67), Expect = 3.1
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = -1

Query: 524  PLAKDIDLSALAKYTQGFSGADITEICQRA 435
            PLA D+DL  +A  T  F+GAD+  +   A
Sbjct: 1025 PLADDVDLQHVASVTDSFTGADLKALLYNA 1054

to top

>AFG32_HUMAN (Q9Y4W6) AFG3-like protein 2 (EC 3.4.24.-) (Paraplegin-like|
           protein)
          Length = 797

 Score = 30.4 bits (67), Expect = 3.1
 Identities = 15/33 (45%), Positives = 17/33 (51%)
 Frame = -1

Query: 521 LAKDIDLSALAKYTQGFSGADITEICQRACKYA 423
           L KD     LA  T GFSGAD+  +C  A   A
Sbjct: 500 LEKDKLARKLASLTPGFSGADVANVCNEAALIA 532

to top

>FTSH_TOBAC (O82150) Cell division protein ftsH homolog, chloroplast precursor|
           (EC 3.4.24.-) (DS9)
          Length = 714

 Score = 29.6 bits (65), Expect = 5.3
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = -1

Query: 521 LAKDIDLSALAKYTQGFSGADITEICQRA 435
           L KD+D   +A+ T G++GAD+  +   A
Sbjct: 441 LTKDVDFEKIARRTPGYTGADLQNLMNEA 469

to top

>CX017_HUMAN (Q9NX05) Protein CXorf17 (Tumor antigen BJ-HCC-21)|
          Length = 1096

 Score = 29.6 bits (65), Expect = 5.3
 Identities = 19/47 (40%), Positives = 20/47 (42%)
 Frame = +2

Query: 230 AASGQRPGTCGCRRHSHYDAHTSSTPRSGQP*SLQPHQPRPPPSLQG 370
           AA G   G  G  RH H+ AH        QP    P  P PPP L G
Sbjct: 70  AALGAYSGGAGPTRH-HHPAHHFHHHGQAQPGLHPPLPPPPPPQLPG 115

to top

>TBP6_YEAST (P40328) Probable 26S protease subunit YTA6 (TAT-binding homolog 6)|
          Length = 754

 Score = 29.6 bits (65), Expect = 5.3
 Identities = 10/27 (37%), Positives = 19/27 (70%)
 Frame = -1

Query: 515 KDIDLSALAKYTQGFSGADITEICQRA 435
           +D+D   + + T+GFSG+D+T + + A
Sbjct: 669 QDLDYELITEMTEGFSGSDLTSLAKEA 695

to top

>FTSH2_SYNY3 (P73179) Cell division protein ftsH homolog 2 (EC 3.4.24.-)|
          Length = 665

 Score = 29.3 bits (64), Expect = 7.0
 Identities = 11/29 (37%), Positives = 20/29 (68%)
 Frame = -1

Query: 521 LAKDIDLSALAKYTQGFSGADITEICQRA 435
           L +++ L+A+A+ T GF+GAD+  +   A
Sbjct: 399 LHEEVQLAAIARRTPGFTGADLANVLNEA 427

to top

>NSF_ARATH (Q9M0Y8) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion|
           protein NSF) (N-ethylmaleimide sensitive fusion protein)
          Length = 742

 Score = 29.3 bits (64), Expect = 7.0
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = -1

Query: 521 LAKDIDLSALAKYTQGFSGADITEICQRACKYAI 420
           L  DI+L  LA  T+ +SGA++  + + A  YA+
Sbjct: 417 LGTDINLQELAARTKNYSGAELEGVVKSATSYAL 450

to top

>FTSH_BACSU (P37476) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 637

 Score = 29.3 bits (64), Expect = 7.0
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = -1

Query: 524 PLAKDIDLSALAKYTQGFSGADITEICQRACKYA 423
           PL + ++L ++A  T GFSGAD+  +   A   A
Sbjct: 348 PLDETVNLKSIAMRTPGFSGADLENLLNEAALVA 381

to top

>FTSH2_ARATH (Q9FH02) Cell division protein ftsH homolog 2, chloroplast|
           precursor (EC 3.4.24.-)
          Length = 704

 Score = 29.3 bits (64), Expect = 7.0
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = -1

Query: 521 LAKDIDLSALAKYTQGFSGADITEICQRA 435
           + KD+D   +A+ T GF+GAD+  +   A
Sbjct: 438 IGKDVDYEKVARRTPGFTGADLQNLMNEA 466

to top

>FTSH1_SYNY3 (Q55700) Cell division protein ftsH homolog 1 (EC 3.4.24.-)|
          Length = 627

 Score = 29.3 bits (64), Expect = 7.0
 Identities = 11/29 (37%), Positives = 19/29 (65%)
 Frame = -1

Query: 521 LAKDIDLSALAKYTQGFSGADITEICQRA 435
           LA ++ + ++A+ T GFSGAD+  +   A
Sbjct: 360 LAPEVSIDSIARRTPGFSGADLANLLNEA 388

to top

>CAPU_DROME (Q24120) Protein cappuccino|
          Length = 1059

 Score = 29.3 bits (64), Expect = 7.0
 Identities = 17/49 (34%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
 Frame = +2

Query: 221 ETAAASGQRPGTCGCRRHSHYDAHTSSTPRSGQ-P*SLQPHQPRPPPSL 364
           ET   S    GTC C + S   +   S    G+ P ++ P  P PPP L
Sbjct: 446 ETQTESEDCEGTCKCGQSSTKVSDNESAKEDGEKPHAVAPPPPPPPPPL 494

to top

>FTSH_CYACA (O19922) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 614

 Score = 28.9 bits (63), Expect = 9.1
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = -1

Query: 515 KDIDLSALAKYTQGFSGADITEICQRA 435
           KD+ L  +A+ T GFSGAD+  +   A
Sbjct: 361 KDVLLEVIARRTPGFSGADLANLLNEA 387

to top

>PRS8_YEAST (Q01939) 26S protease regulatory subunit 8 homolog (SUG1 protein)|
           (CIM3 protein) (TAT-binding protein TBY1)
          Length = 405

 Score = 28.9 bits (63), Expect = 9.1
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = -1

Query: 521 LAKDIDLSALAKYTQGFSGADITEICQRACKYAI 420
           L + I+L  +A+   G SGAD+  +C  A  YA+
Sbjct: 337 LTRGINLRKVAEKMNGCSGADVKGVCTEAGMYAL 370

to top

>RCA1_YEAST (P40341) Mitochondrial respiratory chain complexes assembly protein|
           RCA1 (EC 3.4.24.-) (TAT-binding homolog 12)
          Length = 825

 Score = 28.9 bits (63), Expect = 9.1
 Identities = 13/24 (54%), Positives = 14/24 (58%)
 Frame = -1

Query: 494 LAKYTQGFSGADITEICQRACKYA 423
           LA  T GFSGADI  +C  A   A
Sbjct: 548 LAALTPGFSGADIANVCNEAALIA 571

to top

>VPS5_SCHPO (Q9C0U7) Vacuolar protein sorting-associated protein vps5|
          Length = 576

 Score = 28.9 bits (63), Expect = 9.1
 Identities = 13/43 (30%), Positives = 22/43 (51%)
 Frame = +2

Query: 218 HETAAASGQRPGTCGCRRHSHYDAHTSSTPRSGQP*SLQPHQP 346
           H  ++AS Q+ G+       +  AH ++ P+S  P  +Q H P
Sbjct: 167 HTVSSASSQKQGSTSLTDTENQKAHPAAAPQSLTPFYIQVHDP 209

to top

>PSMR_SULTO (Q975U2) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 392

 Score = 28.9 bits (63), Expect = 9.1
 Identities = 14/31 (45%), Positives = 18/31 (58%)
 Frame = -1

Query: 512 DIDLSALAKYTQGFSGADITEICQRACKYAI 420
           +I    LA  T+GFSGA+I  +C  A   AI
Sbjct: 326 NIRYDILASMTEGFSGAEIKNVCTEAGYIAI 356

to top

>PSMR_PYRFU (Q8U4H3) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 396

 Score = 28.9 bits (63), Expect = 9.1
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = -1

Query: 515 KDIDLSALAKYTQGFSGADITEICQRACKYAI 420
           + +DL  +A+ T+G SGAD+  I   A  +AI
Sbjct: 327 RGVDLRLIAELTEGASGADLKAIATEAGMFAI 358

to top

>PRS8_SCHPO (P41836) 26S protease regulatory subunit 8 homolog (Protein let1)|
          Length = 403

 Score = 28.9 bits (63), Expect = 9.1
 Identities = 12/34 (35%), Positives = 21/34 (61%)
 Frame = -1

Query: 521 LAKDIDLSALAKYTQGFSGADITEICQRACKYAI 420
           L + IDL ++A+   G SGA++  +C  A  +A+
Sbjct: 335 LTRGIDLKSIAEKMNGASGAELKGVCTEAGMFAL 368


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,400,891
Number of Sequences: 219361
Number of extensions: 701226
Number of successful extensions: 2321
Number of sequences better than 10.0: 105
Number of HSP's better than 10.0 without gapping: 2194
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2306
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4027872870
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

to top

full-length cDNA and EST

Clone Information

BLAST Search Result