ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd15p06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_550449.1| Oryza sativa (japonica cultivar-group), mRNA 165 2e-37
2dbj|AK099594.1| Oryza sativa (japonica cultivar-group) cDNA clon... 165 2e-37
3dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 88 4e-14
4dbj|AP001129.1| Oryza sativa (japonica cultivar-group) genomic D... 88 4e-14
5gb|AF149806.1| Oryza sativa hypothetical protein, fertilin alpha... 80 1e-11
6gb|AY105314.1| Zea mays PCO096894 mRNA sequence 74 7e-10
7gb|BT019188.1| Zea mays clone Contig859.F mRNA sequence 66 2e-07
8gb|AY458630.1| Uncultured bacterium 106 clone EBAC750-01B07 geno... 44 0.60
9gb|AE004095.1| Vibrio cholerae O1 biovar eltor str. N16961 chrom... 44 0.60
10dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.4
11gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 42 2.4
12emb|BX000493.1|CNS08CDJ Oryza sativa chromosome 11, . BAC OSJNBb... 42 2.4
13ref|XM_516189.1| PREDICTED: Pan troglodytes ankyrin repeat and S... 40 9.3
14gb|BC014528.2| Homo sapiens ankyrin repeat and SOCS box-containi... 40 9.3
15gb|AE006429.1| Lactococcus lactis subsp. lactis IL1403 section 1... 40 9.3
16ref|NM_001040445.1| Homo sapiens ankyrin repeat and SOCS box-con... 40 9.3
17ref|NM_006549.3| Homo sapiens calcium/calmodulin-dependent prote... 40 9.3
18ref|NM_172216.1| Homo sapiens calcium/calmodulin-dependent prote... 40 9.3
19ref|NM_172226.1| Homo sapiens calcium/calmodulin-dependent prote... 40 9.3
20ref|NM_153499.2| Homo sapiens calcium/calmodulin-dependent prote... 40 9.3
21ref|NM_153500.1| Homo sapiens calcium/calmodulin-dependent prote... 40 9.3
22emb|AL139042.15| Human DNA sequence from clone RP11-459O1 on chr... 40 9.3
23gb|AC010653.10| Homo sapiens chromosome 16 clone RP11-417N10, co... 40 9.3
24gb|AC055878.5| Homo sapiens chromosome 11, clone RP11-34N19, com... 40 9.3
25gb|AF321388.1|AF321388 Homo sapiens CaMKK beta 1 isoform mRNA, c... 40 9.3
26gb|AF321387.1|AF321387 Homo sapiens CaMKK beta 1 isoform mRNA, c... 40 9.3
27gb|AF321386.1|AF321386 Homo sapiens CaMKK beta 1 isoform mRNA, c... 40 9.3
28gb|AC012312.9| Homo sapiens chromosome 5 clone CTC-558O19, compl... 40 9.3
29gb|AF321402.1|H010868S18 Homo sapiens Ca2+/calmodulin-dependent ... 40 9.3
30gb|AF287630.1|AF287630 Homo sapiens calcium/calmodulin-dependent... 40 9.3
31gb|AC009097.9| Homo sapiens chromosome 16 clone RP11-432I5, comp... 40 9.3
32gb|AF156777.1|AF156777 Homo sapiens ASB-1 protein mRNA, complete... 40 9.3
33gb|AC069209.38| Homo sapiens 12 BAC RP11-340F14 (Roswell Park Ca... 40 9.3
34gb|AC119793.3| Homo sapiens 12 BAC RP11-390F17 (Roswell Park Can... 40 9.3
35gb|AC016999.8| Homo sapiens BAC clone RP11-40B20 from 2, complet... 40 9.3
36emb|AL805965.19| Mouse DNA sequence from clone RP23-193K10 on ch... 40 9.3
37gb|AC019013.2|AC019013 Genomic Sequence For Arabidopsis thaliana... 40 9.3
38gb|AF140507.1|AF140507 Homo sapiens Ca2+/calmodulin-dependent pr... 40 9.3
39gb|AC006538.1|AC006538 Homo sapiens chromosome 19, BAC 41195 (CI... 40 9.3
40gb|U87803.1|HSU87803 Human putative Ca2+/calmodulin-dependent pr... 40 9.3
41gb|AC171274.2| Gallus gallus BAC clone CH261-121C13 from chromos... 40 9.3
42emb|AL834322.1|HSM805370 Homo sapiens mRNA; cDNA DKFZp761L24121 ... 40 9.3
43dbj|AB018330.2| Homo sapiens mRNA for KIAA0787 protein, partial cds 40 9.3 
>ref|XM_550449.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2472

 Score =  165 bits (83), Expect = 2e-37
 Identities = 188/222 (84%), Gaps = 1/222 (0%)
 Strand = Plus / Minus

                                                                        
Query: 459  ggaaggatcaaatgatgcctctacatgcaactgtgacttggctggattcacctctatggg 518
            ||||||||| || || ||||||||||||| |   |||||| ||||||| || ||||  ||
Sbjct: 2201 ggaaggatcgaaggacgcctctacatgcatcaccgacttgcctggatttacttctacagg 2142

                                                                        
Query: 519  cttgctaaggagctggactccttgtttccagtatcggctatctggtccagtgcttagcac 578
            |||||||| |||||| ||||||||||||||||||||| |||||||||| ||  ||| |||
Sbjct: 2141 cttgctaaagagctgtactccttgtttccagtatcggttatctggtccggttgttaacac 2082

                                                                        
Query: 579  gatggagtttttctcatcaagtacccagtcaatccaaaccg-naaaccatggcacgttcc 637
             | ||| ||| |||||||||| ||||| |||||||||||||  ||||||||||| |||||
Sbjct: 2081 aacggattttctctcatcaagaacccaatcaatccaaaccgcaaaaccatggcatgttcc 2022

                                                      
Query: 638  agcatcagcaaactctatctttgttttcccaaagcatgagtg 679
            | ||| || |||||| ||||||||||||||||| || |||||
Sbjct: 2021 atcatgagaaaactcgatctttgttttcccaaaacaggagtg 1980
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>dbj|AK099594.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013044A06, full
            insert sequence
          Length = 2469

 Score =  165 bits (83), Expect = 2e-37
 Identities = 188/222 (84%), Gaps = 1/222 (0%)
 Strand = Plus / Minus

                                                                        
Query: 459  ggaaggatcaaatgatgcctctacatgcaactgtgacttggctggattcacctctatggg 518
            ||||||||| || || ||||||||||||| |   |||||| ||||||| || ||||  ||
Sbjct: 2197 ggaaggatcgaaggacgcctctacatgcatcaccgacttgcctggatttacttctacagg 2138

                                                                        
Query: 519  cttgctaaggagctggactccttgtttccagtatcggctatctggtccagtgcttagcac 578
            |||||||| |||||| ||||||||||||||||||||| |||||||||| ||  ||| |||
Sbjct: 2137 cttgctaaagagctgtactccttgtttccagtatcggttatctggtccggttgttaacac 2078

                                                                        
Query: 579  gatggagtttttctcatcaagtacccagtcaatccaaaccg-naaaccatggcacgttcc 637
             | ||| ||| |||||||||| ||||| |||||||||||||  ||||||||||| |||||
Sbjct: 2077 aacggattttctctcatcaagaacccaatcaatccaaaccgcaaaaccatggcatgttcc 2018

                                                      
Query: 638  agcatcagcaaactctatctttgttttcccaaagcatgagtg 679
            | ||| || |||||| ||||||||||||||||| || |||||
Sbjct: 2017 atcatgagaaaactcgatctttgttttcccaaaacaggagtg 1976
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6,
              complete sequence
          Length = 30731886

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 89/104 (85%)
 Strand = Plus / Minus

                                                                          
Query: 459    ggaaggatcaaatgatgcctctacatgcaactgtgacttggctggattcacctctatggg 518
              ||||||||| || || ||||||||||||| |   |||||| ||||||| || ||||  ||
Sbjct: 381394 ggaaggatcgaaggacgcctctacatgcatcaccgacttgcctggatttacttctacagg 381335

                                                          
Query: 519    cttgctaaggagctggactccttgtttccagtatcggctatctg 562
              |||||||| |||||| ||||||||||||||||||||| ||||||
Sbjct: 381334 cttgctaaagagctgtactccttgtttccagtatcggttatctg 381291



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 60/69 (86%), Gaps = 1/69 (1%)
 Strand = Plus / Minus

                                                                          
Query: 590    tctcatcaagtacccagtcaatccaaaccg-naaaccatggcacgttccagcatcagcaa 648
              |||||||||| ||||| |||||||||||||  ||||||||||| |||||| ||| || ||
Sbjct: 381175 tctcatcaagaacccaatcaatccaaaccgcaaaaccatggcatgttccatcatgagaaa 381116

                       
Query: 649    actctatct 657
              |||| ||||
Sbjct: 381115 actcgatct 381107
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>dbj|AP001129.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0644B06
          Length = 194509

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 89/104 (85%)
 Strand = Plus / Minus

                                                                         
Query: 459   ggaaggatcaaatgatgcctctacatgcaactgtgacttggctggattcacctctatggg 518
             ||||||||| || || ||||||||||||| |   |||||| ||||||| || ||||  ||
Sbjct: 91347 ggaaggatcgaaggacgcctctacatgcatcaccgacttgcctggatttacttctacagg 91288

                                                         
Query: 519   cttgctaaggagctggactccttgtttccagtatcggctatctg 562
             |||||||| |||||| ||||||||||||||||||||| ||||||
Sbjct: 91287 cttgctaaagagctgtactccttgtttccagtatcggttatctg 91244



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 60/69 (86%), Gaps = 1/69 (1%)
 Strand = Plus / Minus

                                                                         
Query: 590   tctcatcaagtacccagtcaatccaaaccg-naaaccatggcacgttccagcatcagcaa 648
             |||||||||| ||||| |||||||||||||  ||||||||||| |||||| ||| || ||
Sbjct: 91128 tctcatcaagaacccaatcaatccaaaccgcaaaaccatggcatgttccatcatgagaaa 91069

                      
Query: 649   actctatct 657
             |||| ||||
Sbjct: 91068 actcgatct 91060
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>gb|AF149806.1| Oryza sativa hypothetical protein, fertilin alpha subunit, membrane
            protein homolog, and Myb-related protein genes, complete
            cds; and unknown gene
          Length = 33178

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 88/104 (84%)
 Strand = Plus / Minus

                                                                        
Query: 459  ggaaggatcaaatgatgcctctacatgcaactgtgacttggctggattcacctctatggg 518
            ||||||||| || || ||||||||||||| |   |||||| ||||||| || ||||  ||
Sbjct: 7223 ggaaggatcgaaggacgcctctacatgcatcaccgacttgcctggatttacttctacagg 7164

                                                        
Query: 519  cttgctaaggagctggactccttgtttccagtatcggctatctg 562
            ||||| || |||||| ||||||||||||||||||||| ||||||
Sbjct: 7163 cttgccaaagagctgtactccttgtttccagtatcggttatctg 7120



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 60/69 (86%), Gaps = 1/69 (1%)
 Strand = Plus / Minus

                                                                        
Query: 590  tctcatcaagtacccagtcaatccaaaccg-naaaccatggcacgttccagcatcagcaa 648
            |||||||||| ||||| |||||||||||||  ||||||||||| |||||| ||| || ||
Sbjct: 7004 tctcatcaagaacccaatcaatccaaaccgcaaaaccatggcatgttccatcatgagaaa 6945

                     
Query: 649  actctatct 657
            |||| ||||
Sbjct: 6944 actcgatct 6936
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>gb|AY105314.1| Zea mays PCO096894 mRNA sequence
          Length = 961

 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 82/97 (84%)
 Strand = Plus / Minus

                                                                       
Query: 521 tgctaaggagctggactccttgtttccagtatcggctatctggtccagtgcttagcacga 580
           ||||||| ||||| || ||||| |||||||||| ||| ||||| || ||||||| ||| |
Sbjct: 587 tgctaagcagctgcaccccttgcttccagtatctgctctctggcccggtgcttatcacta 528

                                                
Query: 581 tggagtttttctcatcaagtacccagtcaatccaaac 617
           |||| |||| ||  |||||||||||||| ||||||||
Sbjct: 527 tggaattttccttgtcaagtacccagtcgatccaaac 491
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>gb|BT019188.1| Zea mays clone Contig859.F mRNA sequence
          Length = 1631

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 81/97 (83%)
 Strand = Plus / Minus

                                                                        
Query: 521  tgctaaggagctggactccttgtttccagtatcggctatctggtccagtgcttagcacga 580
            ||||||| |||||  | ||||| |||||||||| ||| ||||| || ||||||| ||| |
Sbjct: 1269 tgctaagcagctgccccccttgcttccagtatctgctctctggcccggtgcttatcacta 1210

                                                 
Query: 581  tggagtttttctcatcaagtacccagtcaatccaaac 617
            |||| |||| ||  |||||||||||||| ||||||||
Sbjct: 1209 tggaattttccttgtcaagtacccagtcgatccaaac 1173
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>gb|AY458630.1| Uncultured bacterium 106 clone EBAC750-01B07 genomic sequence
          Length = 43887

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 398   acgaggttccatgatgcaactt 419
             ||||||||||||||||||||||
Sbjct: 12786 acgaggttccatgatgcaactt 12765
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>gb|AE004095.1| Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, section 3
           of 251 of the complete chromosome
          Length = 15112

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 642 tcagcaaactctatctttgttt 663
           ||||||||||||||||||||||
Sbjct: 804 tcagcaaactctatctttgttt 825
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11,
              complete sequence
          Length = 28386948

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 24     ttaaacttgctcaaatactgc 44
              |||||||||||||||||||||
Sbjct: 530673 ttaaacttgctcaaatactgc 530653
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 24     ttaaacttgctcaaatactgc 44
              |||||||||||||||||||||
Sbjct: 530673 ttaaacttgctcaaatactgc 530653
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>emb|BX000493.1|CNS08CDJ Oryza sativa chromosome 11, . BAC OSJNBb0037D03 of library OSJNBb from
             chromosome 11 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 130544

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 24    ttaaacttgctcaaatactgc 44
             |||||||||||||||||||||
Sbjct: 39639 ttaaacttgctcaaatactgc 39659
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>ref|XM_516189.1| PREDICTED: Pan troglodytes ankyrin repeat and SOCS box-containing
            protein 1 (LOC460059), mRNA
          Length = 2286

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 397  cacgaggttccatgatgcaacttacgtc 424
            ||||||| ||||||||||| ||||||||
Sbjct: 1392 cacgaggctccatgatgcagcttacgtc 1419
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>gb|BC014528.2| Homo sapiens ankyrin repeat and SOCS box-containing 1, mRNA (cDNA
           clone MGC:11165 IMAGE:3842384), complete cds
          Length = 1331

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 397 cacgaggttccatgatgcaacttacgtc 424
           ||||||| ||||||||||| ||||||||
Sbjct: 200 cacgaggctccatgatgcagcttacgtc 227
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>gb|AE006429.1| Lactococcus lactis subsp. lactis IL1403 section 191 of 218 of the
            complete genome
          Length = 13456

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 43   gcaaatagttaaatacaacc 62
            ||||||||||||||||||||
Sbjct: 9908 gcaaatagttaaatacaacc 9927
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>ref|NM_001040445.1| Homo sapiens ankyrin repeat and SOCS box-containing 1 (ASB1), mRNA
          Length = 6833

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 397 cacgaggttccatgatgcaacttacgtc 424
           ||||||| ||||||||||| ||||||||
Sbjct: 200 cacgaggctccatgatgcagcttacgtc 227
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>ref|NM_006549.3| Homo sapiens calcium/calmodulin-dependent protein kinase kinase 2,
            beta (CAMKK2), transcript variant 1, mRNA
          Length = 5620

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                       
Query: 613  caaaccgnaaaccatggcacgttccag 639
            ||||||| |||||||||||| ||||||
Sbjct: 3056 caaaccggaaaccatggcaccttccag 3082
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>ref|NM_172216.1| Homo sapiens calcium/calmodulin-dependent protein kinase kinase 2,
            beta (CAMKK2), transcript variant 3, mRNA
          Length = 5491

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                       
Query: 613  caaaccgnaaaccatggcacgttccag 639
            ||||||| |||||||||||| ||||||
Sbjct: 2927 caaaccggaaaccatggcaccttccag 2953
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>ref|NM_172226.1| Homo sapiens calcium/calmodulin-dependent protein kinase kinase 2,
            beta (CAMKK2), transcript variant 7, mRNA
          Length = 4873

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                       
Query: 613  caaaccgnaaaccatggcacgttccag 639
            ||||||| |||||||||||| ||||||
Sbjct: 2309 caaaccggaaaccatggcaccttccag 2335
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>ref|NM_153499.2| Homo sapiens calcium/calmodulin-dependent protein kinase kinase 2,
            beta (CAMKK2), transcript variant 2, mRNA
          Length = 5577

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                       
Query: 613  caaaccgnaaaccatggcacgttccag 639
            ||||||| |||||||||||| ||||||
Sbjct: 3013 caaaccggaaaccatggcaccttccag 3039
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>ref|NM_153500.1| Homo sapiens calcium/calmodulin-dependent protein kinase kinase 2,
            beta (CAMKK2), transcript variant 4, mRNA
          Length = 5448

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                       
Query: 613  caaaccgnaaaccatggcacgttccag 639
            ||||||| |||||||||||| ||||||
Sbjct: 2884 caaaccggaaaccatggcaccttccag 2910
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>emb|AL139042.15| Human DNA sequence from clone RP11-459O1 on chromosome 6 Contains an
             actin beta (ACTB) pseudogene and part of a novel gene,
             complete sequence
          Length = 107745

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 446   tgatgtcaccagaggaagga 465
             ||||||||||||||||||||
Sbjct: 19713 tgatgtcaccagaggaagga 19732
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>gb|AC010653.10| Homo sapiens chromosome 16 clone RP11-417N10, complete sequence
          Length = 184515

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 34     tcaaatactgcaaatagttaaata 57
              ||||||||||| ||||||||||||
Sbjct: 144938 tcaaatactgctaatagttaaata 144915
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>gb|AC055878.5| Homo sapiens chromosome 11, clone RP11-34N19, complete sequence
          Length = 183763

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 125   aattcccagatacacacatc 144
             ||||||||||||||||||||
Sbjct: 42374 aattcccagatacacacatc 42393
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>gb|AF321388.1|AF321388 Homo sapiens CaMKK beta 1 isoform mRNA, complete cds
          Length = 5195

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                       
Query: 613  caaaccgnaaaccatggcacgttccag 639
            ||||||| |||||||||||| ||||||
Sbjct: 2636 caaaccggaaaccatggcaccttccag 2662
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>gb|AF321387.1|AF321387 Homo sapiens CaMKK beta 1 isoform mRNA, complete cds
          Length = 5324

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                       
Query: 613  caaaccgnaaaccatggcacgttccag 639
            ||||||| |||||||||||| ||||||
Sbjct: 2765 caaaccggaaaccatggcaccttccag 2791
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>gb|AF321386.1|AF321386 Homo sapiens CaMKK beta 1 isoform mRNA, complete cds
          Length = 5238

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                       
Query: 613  caaaccgnaaaccatggcacgttccag 639
            ||||||| |||||||||||| ||||||
Sbjct: 2679 caaaccggaaaccatggcaccttccag 2705
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>gb|AC012312.9| Homo sapiens chromosome 5 clone CTC-558O19, complete sequence
          Length = 181226

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 46     aatagttaaatacaacccca 65
              ||||||||||||||||||||
Sbjct: 117087 aatagttaaatacaacccca 117106
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>gb|AF321402.1|H010868S18 Homo sapiens Ca2+/calmodulin-dependent protein kinase kinase beta 1
           (CAMKK2) gene, exon 18 and complete cds
          Length = 3174

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                      
Query: 613 caaaccgnaaaccatggcacgttccag 639
           ||||||| |||||||||||| ||||||
Sbjct: 633 caaaccggaaaccatggcaccttccag 659
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>gb|AF287630.1|AF287630 Homo sapiens calcium/calmodulin-dependent protein kinase kinase b1
            mRNA, complete cds
          Length = 5611

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                       
Query: 613  caaaccgnaaaccatggcacgttccag 639
            ||||||| |||||||||||| ||||||
Sbjct: 3052 caaaccggaaaccatggcaccttccag 3078
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>gb|AC009097.9| Homo sapiens chromosome 16 clone RP11-432I5, complete sequence
          Length = 199471

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 34     tcaaatactgcaaatagttaaata 57
              ||||||||||| ||||||||||||
Sbjct: 178389 tcaaatactgctaatagttaaata 178412
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>gb|AF156777.1|AF156777 Homo sapiens ASB-1 protein mRNA, complete cds
          Length = 1008

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 397 cacgaggttccatgatgcaacttacgtc 424
           ||||||| ||||||||||| ||||||||
Sbjct: 114 cacgaggctccatgatgcagcttacgtc 141
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>gb|AC069209.38| Homo sapiens 12 BAC RP11-340F14 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 157792

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                        
Query: 613   caaaccgnaaaccatggcacgttccag 639
             ||||||| |||||||||||| ||||||
Sbjct: 74034 caaaccggaaaccatggcaccttccag 74008
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>gb|AC119793.3| Homo sapiens 12 BAC RP11-390F17 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 73625

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 247   atctctgaaaatttaaacat 266
             ||||||||||||||||||||
Sbjct: 67320 atctctgaaaatttaaacat 67339
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>gb|AC016999.8| Homo sapiens BAC clone RP11-40B20 from 2, complete sequence
          Length = 93778

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 397   cacgaggttccatgatgcaacttacgtc 424
             ||||||| ||||||||||| ||||||||
Sbjct: 24929 cacgaggctccatgatgcagcttacgtc 24956
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>emb|AL805965.19| Mouse DNA sequence from clone RP23-193K10 on chromosome 2, complete
              sequence
          Length = 205790

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 434    aggagcaaaatgtgatgtca 453
              ||||||||||||||||||||
Sbjct: 138590 aggagcaaaatgtgatgtca 138609
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>gb|AC019013.2|AC019013 Genomic Sequence For Arabidopsis thaliana, Clone T5E15, Chromosome V,
             complete sequence
          Length = 114056

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 153   gaataaccatgatgggcatt 172
             ||||||||||||||||||||
Sbjct: 36698 gaataaccatgatgggcatt 36679
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>gb|AF140507.1|AF140507 Homo sapiens Ca2+/calmodulin-dependent protein kinase kinase beta
            (CAMKKB) mRNA, complete cds
          Length = 2772

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                       
Query: 613  caaaccgnaaaccatggcacgttccag 639
            ||||||| |||||||||||| ||||||
Sbjct: 2374 caaaccggaaaccatggcaccttccag 2400
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>gb|AC006538.1|AC006538 Homo sapiens chromosome 19, BAC 41195 (CIT-B-31c16), complete sequence
          Length = 177540

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 494   acttggctggattcacctct 513
             ||||||||||||||||||||
Sbjct: 47469 acttggctggattcacctct 47488
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>gb|U87803.1|HSU87803 Human putative Ca2+/calmodulin-dependent protein kinase kinase
           gene, 3' flanking region, partial sequence
          Length = 1639

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                      
Query: 613 caaaccgnaaaccatggcacgttccag 639
           ||||||| |||||||||||| ||||||
Sbjct: 829 caaaccggaaaccatggcaccttccag 855
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>gb|AC171274.2| Gallus gallus BAC clone CH261-121C13 from chromosome ul, complete
             sequence
          Length = 218983

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 36    aaatactgcaaatagttaaa 55
             ||||||||||||||||||||
Sbjct: 48982 aaatactgcaaatagttaaa 48963
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>emb|AL834322.1|HSM805370 Homo sapiens mRNA; cDNA DKFZp761L24121 (from clone DKFZp761L24121)
          Length = 3814

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                       
Query: 613  caaaccgnaaaccatggcacgttccag 639
            ||||||| |||||||||||| ||||||
Sbjct: 1328 caaaccggaaaccatggcaccttccag 1354
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>dbj|AB018330.2| Homo sapiens mRNA for KIAA0787 protein, partial cds
          Length = 4450

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                       
Query: 613  caaaccgnaaaccatggcacgttccag 639
            ||||||| |||||||||||| ||||||
Sbjct: 1905 caaaccggaaaccatggcaccttccag 1931


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,448,850
Number of Sequences: 3902068
Number of extensions: 6448850
Number of successful extensions: 114057
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 113814
Number of HSP's gapped (non-prelim): 238
length of query: 680
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 657
effective length of database: 17,143,297,704
effective search space: 11263146591528
effective search space used: 11263146591528
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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