ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd15p04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1SOS_DROME (P26675) Protein son of sevenless 28 9.2

>SOS_DROME (P26675) Protein son of sevenless|
          Length = 1596

 Score = 27.7 bits (60), Expect = 9.2
 Identities = 14/38 (36%), Positives = 17/38 (44%)
 Frame = -1

Query: 119 LEKARQSETIKFSLYKNXXXXXXXXIEWKSKRKGVGIP 6
           LE ARQ   ++F +YKN          W  K K V  P
Sbjct: 831 LELARQLTLLEFEMYKNVKPSELVGSPWTKKDKEVKSP 868


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,837,213
Number of Sequences: 219361
Number of extensions: 176401
Number of successful extensions: 361
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 361
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 361
length of database: 80,573,946
effective HSP length: 21
effective length of database: 75,967,365
effective search space used: 1823216760
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top