ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd15p04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|X00408.1|CHHV01 Hordeum vulgare chloroplast genes for ATPase... 260 9e-67
2dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome 238 3e-60
3gb|J04954.1|WHTCPPSBG Triticum aestivum chloroplast NADPH-plasto... 127 9e-27
4emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome 109 2e-21
5gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome 109 2e-21
6gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-1... 101 5e-19
7gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome... 101 5e-19
8gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast,... 101 5e-19
9gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar N... 101 5e-19
10dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 101 5e-19
11dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 101 5e-19
12gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 101 5e-19
13gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 101 5e-19
14emb|BX000560.1|CNS08CE6 Oryza sativa chromosome 12, . BAC OSJNBa... 101 5e-19
15dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete ... 101 5e-19
16gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar N... 94 1e-16
17gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA... 94 1e-16
18emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chlor... 94 1e-16
19emb|AL606447.3|OSJN00011 Oryza sativa genomic DNA, chromosome 4,... 94 1e-16
20dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 94 1e-16
21dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 94 1e-16
22gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 gen... 94 1e-16
23dbj|AP004757.3| Oryza sativa (japonica cultivar-group) genomic D... 94 1e-16
24dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome 94 1e-16
25emb|BX119951.3|CNS09S4U Oryza sativa chromosome 12, . BAC OJ1523... 86 3e-14
26dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.007
27dbj|AP005004.3| Oryza sativa (japonica cultivar-group) genomic D... 48 0.007
28dbj|AP004236.3| Oryza sativa (japonica cultivar-group) genomic D... 48 0.007
29dbj|AP003623.3| Oryza sativa (japonica cultivar-group) genomic D... 48 0.007
30emb|AL645926.16| Zebrafish DNA sequence from clone RP71-1G24, co... 46 0.027
31gb|DP000044.2| Callithrix jacchus target 106 genomic scaffold 42 0.42
32gb|AC149804.11| Medicago truncatula clone mth2-73h22, complete s... 42 0.42
33gb|AY312507.1| Thelohania solenopsae isolate LA 2 small subunit ... 40 1.6
34gb|AY312506.1| Thelohania solenopsae isolate Florida small subun... 40 1.6
35gb|AY312505.1| Thelohania solenopsae isolate Texas 3430 small su... 40 1.6
36gb|AY312504.1| Thelohania solenopsae isolate Texas 3427 small su... 40 1.6
37gb|AY312503.1| Thelohania solenopsae isolate Texas 3344 small su... 40 1.6
38gb|AY312502.1| Thelohania solenopsae isolate Texas 3362 small su... 40 1.6
39emb|CR932579.1|CNS0KYB9 Paramecium tetraurelia, Small GTPase rab... 40 1.6
40gb|AC053481.13| Homo sapiens chromosome 17, clone RP11-51L5, com... 40 1.6
41gb|AC008026.7| Homo sapiens chromosome 17, clone RP11-464D20, co... 40 1.6
42dbj|AP006197.1| Homo sapiens genomic DNA, chromosome 6, clone:RP... 40 1.6
43dbj|AP006195.1| Homo sapiens genomic DNA, chromosome 6, clone:RP... 40 1.6
44emb|AL359174.14| Human DNA sequence from clone RP11-423D17 on ch... 40 1.6
45dbj|AB041992.1| Homo sapiens genomic DNA, chromosome 6q21, clone... 40 1.6
46dbj|AP002529.1| Homo sapiens genomic DNA, chromosome 6q21, anti-... 40 1.6
47dbj|AB041512.1| Homo sapiens genomic DNA, chromosome 6q21, clone... 40 1.6
48ref|XM_474910.1| Oryza sativa (japonica cultivar-group), predic... 38 6.5
49gb|AY430372.1| Dicentrarchus labrax clone DLA0142 microsatellite... 38 6.5
50gb|AC132290.3| Mus musculus BAC clone RP24-318H2 from chromosome... 38 6.5
51emb|CR293498.12| Zebrafish DNA sequence from clone DKEY-5I16 in ... 38 6.5
52emb|BX927318.10| Zebrafish DNA sequence from clone DKEY-159N16 i... 38 6.5
53gb|AC155955.2| Xenopus tropicalis clone CH216-151P9, complete se... 38 6.5
54gb|AC123687.20| Mus musculus chromosome 5, clone RP23-314A12, co... 38 6.5
55gb|AC147006.18| Medicago truncatula clone mth2-62m1, complete se... 38 6.5
56emb|AL355272.3| Human DNA sequence from clone RP5-955L16 on chro... 38 6.5
57emb|AL136461.10| Human DNA sequence from clone RP11-32G22 on chr... 38 6.5
58emb|AL031121.5|HS495O10 Human DNA sequence from clone RP3-495O10... 38 6.5
59emb|AL596025.22| Mouse DNA sequence from clone RP23-215H18 on ch... 38 6.5
60emb|AL662948.4|OSJN00150 Oryza sativa genomic DNA, chromosome 4,... 38 6.5
61emb|AL161513.2|ATCHRIV25 Arabidopsis thaliana DNA chromosome 4, ... 38 6.5
62gb|AC161426.5| Mus musculus BAC clone RP23-69L13 from chromosome... 38 6.5
63gb|AC008951.6| Homo sapiens chromosome 5 clone CTD-2337A12, comp... 38 6.5
64gb|AC025460.7| Homo sapiens chromosome 5 clone CTD-2235E24, comp... 38 6.5
65gb|AC155952.2| Xenopus tropicalis clone CH216-120G20, complete s... 38 6.5
66gb|AC018727.10| Oryza sativa chromosome 10 BAC OSJNBa0056G17 gen... 38 6.5
67gb|AC012673.37| Homo sapiens 12 BAC RP11-431G15 (Roswell Park Ca... 38 6.5
68gb|AC008329.3|AC008329 Drosophila melanogaster, chromosome 2L, r... 38 6.5
69emb|BX649401.4| Zebrafish DNA sequence from clone DKEY-48E10 in ... 38 6.5
70gb|AC154436.2| Mus musculus BAC clone RP24-192B24 from chromosom... 38 6.5
71gb|AC096709.19| Homo sapiens chromosome 18, clone RP11-707P24, c... 38 6.5
72gb|AC125005.15| Mus musculus chromosome 5, clone RP23-370D2, com... 38 6.5
73emb|AL928932.14| Mouse DNA sequence from clone RP24-235B14 on ch... 38 6.5
74emb|AL929222.6| Zebrafish DNA sequence from clone DKEY-31N5, com... 38 6.5
75dbj|AK103472.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 6.5
76emb|BX547928.7| Zebrafish DNA sequence from clone DKEY-172O10 in... 38 6.5
77emb|CT025669.8| Zebrafish DNA sequence from clone DKEY-256E21 in... 38 6.5
78gb|AE003619.3| Drosophila melanogaster chromosome 2L, section 28... 38 6.5
79gb|AF128396.1|T3H13 Arabidopsis thaliana BAC T3H13 38 6.5
80gb|AC005359.1|AC005359 REVERSE-COMPLEMENT OF: F23J3.GCG.SEQ CHE... 38 6.5
81emb|CT025528.10| Mouse DNA sequence from clone RP23-205O23 on ch... 38 6.5 
>emb|X00408.1|CHHV01 Hordeum vulgare chloroplast genes for ATPase subunits B and E,
            transfer RNA2-Met and transfer RNA1-Val
          Length = 3819

 Score =  260 bits (131), Expect = 9e-67
 Identities = 135/137 (98%)
 Strand = Plus / Minus

                                                                        
Query: 1    tccaatggaatcccaactccctttcttttggatttccattctattnagatatggtgtatg 60
            ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 3519 tccaatggaatcccaactccctttcttttggatttccattctatttagatatggtgtatg 3460

                                                                        
Query: 61   tagatctaattcttatataaagaaaactttatcgtttcactttgtctcgctttctctaga 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3459 tagatctaattcttatataaagaaaactttatcgtttcactttgtctcgctttctctaga 3400

                             
Query: 121  atctctatnaaaaaaga 137
            |||||||| ||||||||
Sbjct: 3399 atctctataaaaaaaga 3383
to top
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome
          Length = 134545

 Score =  238 bits (120), Expect = 3e-60
 Identities = 125/127 (98%)
 Strand = Plus / Plus

                                                                         
Query: 1     tccaatggaatcccaactccctttcttttggatttccattctattnagatatggtgtatg 60
             ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 50424 tccaatggaatcccaactccctttcttttggatttccattctatttagatatggtgtatg 50483

                                                                         
Query: 61    tagatctaattcttatataaagaaaactttatcgtttcactttgtctcgctttctctaga 120
             |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 50484 tagatctaattcttatataaagaaaactttctcgtttcactttgtctcgctttctctaga 50543

                    
Query: 121   atctcta 127
             |||||||
Sbjct: 50544 atctcta 50550
to top
>gb|J04954.1|WHTCPPSBG Triticum aestivum chloroplast NADPH-plastoquinone oxireductase
          (psbG) and thylakoid membrane protein (ndhC) genes,
          complete cds
          Length = 1492

 Score =  127 bits (64), Expect = 9e-27
 Identities = 66/67 (98%)
 Strand = Plus / Minus

                                                                      
Query: 1  tccaatggaatcccaactccctttcttttggatttccattctattnagatatggtgtatg 60
          ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 67 tccaatggaatcccaactccctttcttttggatttccattctatttagatatggtgtatg 8

                 
Query: 61 tagatct 67
          |||||||
Sbjct: 7  tagatct 1
to top
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome
          Length = 140384

 Score =  109 bits (55), Expect = 2e-21
 Identities = 109/127 (85%), Gaps = 4/127 (3%)
 Strand = Plus / Plus

                                                                         
Query: 1     tccaatggaatcccaactccctttcttttggatttccattctattnagatatggtgtatg 60
             ||||||| |||||| ||| || ||||||| ||||||| ||||||| |||||||    || 
Sbjct: 52403 tccaatgtaatccccacttcccttctttttgatttcccttctatttagatatg----ata 52458

                                                                         
Query: 61    tagatctaattcttatataaagaaaactttatcgtttcactttgtctcgctttctctaga 120
             |||| |||||||||||| |||||||||| | ||| ||||||||||||| |||||||||||
Sbjct: 52459 tagacctaattcttatacaaagaaaactctttcgcttcactttgtctcactttctctaga 52518

                    
Query: 121   atctcta 127
             |||||||
Sbjct: 52519 atctcta 52525
to top
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome
          Length = 140454

 Score =  109 bits (55), Expect = 2e-21
 Identities = 109/127 (85%), Gaps = 4/127 (3%)
 Strand = Plus / Plus

                                                                         
Query: 1     tccaatggaatcccaactccctttcttttggatttccattctattnagatatggtgtatg 60
             ||||||| |||||| ||| || ||||||| ||||||| ||||||| |||||||    || 
Sbjct: 52392 tccaatgtaatccccacttcccttctttttgatttcccttctatttagatatg----ata 52447

                                                                         
Query: 61    tagatctaattcttatataaagaaaactttatcgtttcactttgtctcgctttctctaga 120
             |||| |||||||||||| |||||||||| | ||| ||||||||||||| |||||||||||
Sbjct: 52448 tagacctaattcttatacaaagaaaactctttcgcttcactttgtctcactttctctaga 52507

                    
Query: 121   atctcta 127
             |||||||
Sbjct: 52508 atctcta 52514
to top
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast,
             complete genome
          Length = 134496

 Score =  101 bits (51), Expect = 5e-19
 Identities = 108/127 (85%), Gaps = 4/127 (3%)
 Strand = Plus / Plus

                                                                         
Query: 1     tccaatggaatcccaactccctttcttttggatttccattctattnagatatggtgtatg 60
             |||||||||||||| |||||||||||||| ||||||| ||||||| || |||||    ||
Sbjct: 49781 tccaatggaatcccgactccctttctttttgatttcctttctatttaggtatgg----tg 49836

                                                                         
Query: 61    tagatctaattcttatataaagaaaactttatcgtttcactttgtctcgctttctctaga 120
              |||  ||||||||||| ||| |||||| | ||| |||||||||||||  ||||||||||
Sbjct: 49837 gagacataattcttatagaaacaaaactctctcgcttcactttgtctcattttctctaga 49896

                    
Query: 121   atctcta 127
             |||||||
Sbjct: 49897 atctcta 49903
to top
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             OSJNAb0075K12, complete sequence
          Length = 125936

 Score =  101 bits (51), Expect = 5e-19
 Identities = 108/127 (85%), Gaps = 4/127 (3%)
 Strand = Plus / Plus

                                                                         
Query: 1     tccaatggaatcccaactccctttcttttggatttccattctattnagatatggtgtatg 60
             |||||||||||||| |||||||||||||| ||||||| ||||||| || |||||    ||
Sbjct: 48035 tccaatggaatcccgactccctttctttttgatttcctttctatttaggtatgg----tg 48090

                                                                         
Query: 61    tagatctaattcttatataaagaaaactttatcgtttcactttgtctcgctttctctaga 120
              |||  ||||||||||| ||| |||||| | ||| |||||||||||||  ||||||||||
Sbjct: 48091 gagacataattcttatagaaacaaaactctctcgcttcactttgtctcattttctctaga 48150

                    
Query: 121   atctcta 127
             |||||||
Sbjct: 48151 atctcta 48157
to top
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome
          Length = 141182

 Score =  101 bits (51), Expect = 5e-19
 Identities = 108/127 (85%), Gaps = 4/127 (3%)
 Strand = Plus / Plus

                                                                          
Query: 1      tccaatggaatcccaactccctttcttttggatttccattctattnagatatggtgtatg 60
              ||||||| |||||| |||  | ||||||| ||||||| ||||||| |||||||    || 
Sbjct: 114557 tccaatgtaatccccacttgccttctttttgatttcccttctatttagatatg----ata 114612

                                                                          
Query: 61     tagatctaattcttatataaagaaaactttatcgtttcactttgtctcgctttctctaga 120
              |||| |||||||||||| |||||||||| | ||| ||||||||||||| |||||||||||
Sbjct: 114613 tagacctaattcttatacaaagaaaactctttcgcttcactttgtctcactttctctaga 114672

                     
Query: 121    atctcta 127
              |||||||
Sbjct: 114673 atctcta 114679
to top
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from
              chromosome 10, complete sequence
          Length = 134933

 Score =  101 bits (51), Expect = 5e-19
 Identities = 108/127 (85%), Gaps = 4/127 (3%)
 Strand = Plus / Plus

                                                                          
Query: 1      tccaatggaatcccaactccctttcttttggatttccattctattnagatatggtgtatg 60
              |||||||||||||| |||||||||||||| ||||||| ||||||| || |||||    ||
Sbjct: 122968 tccaatggaatcccgactccctttctttttgatttcctttctatttaggtatgg----tg 123023

                                                                          
Query: 61     tagatctaattcttatataaagaaaactttatcgtttcactttgtctcgctttctctaga 120
               |||  ||||||||||| ||| |||||| | ||| |||||||||||||  ||||||||||
Sbjct: 123024 gagacataattcttatagaaacaaaactctctcgcttcactttgtctcattttctctaga 123083

                     
Query: 121    atctcta 127
              |||||||
Sbjct: 123084 atctcta 123090
to top
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score =  101 bits (51), Expect = 5e-19
 Identities = 108/127 (85%), Gaps = 4/127 (3%)
 Strand = Plus / Plus

                                                                           
Query: 1       tccaatggaatcccaactccctttcttttggatttccattctattnagatatggtgtatg 60
               |||||||||||||| |||||||||||||| ||||||| ||||||| || |||||    ||
Sbjct: 5608871 tccaatggaatcccgactccctttctttttgatttcctttctatttaggtatgg----tg 5608926

                                                                           
Query: 61      tagatctaattcttatataaagaaaactttatcgtttcactttgtctcgctttctctaga 120
                |||  ||||||||||| ||| |||||| | ||| |||||||||||||  ||||||||||
Sbjct: 5608927 gagacataattcttatagaaacaaaactctctcgcttcactttgtctcattttctctaga 5608986

                      
Query: 121     atctcta 127
               |||||||
Sbjct: 5608987 atctcta 5608993



 Score = 85.7 bits (43), Expect = 3e-14
 Identities = 106/127 (83%), Gaps = 4/127 (3%)
 Strand = Plus / Plus

                                                                            
Query: 1        tccaatggaatcccaactccctttcttttggatttccattctattnagatatggtgtatg 60
                |||||||||||||| ||||||||||||||  |||||| ||||||| || |||||    ||
Sbjct: 11285995 tccaatggaatcccgactccctttcttttttatttcctttctatttaggtatgg----tg 11286050

                                                                            
Query: 61       tagatctaattcttatataaagaaaactttatcgtttcactttgtctcgctttctctaga 120
                 |||  ||||||||||| ||| |||||| | ||| ||||| |||||||  ||||||||||
Sbjct: 11286051 gagacataattcttatagaaacaaaactctctcgcttcacgttgtctcattttctctaga 11286110

                       
Query: 121      atctcta 127
                |||||||
Sbjct: 11286111 atctcta 11286117
to top
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score =  101 bits (51), Expect = 5e-19
 Identities = 108/127 (85%), Gaps = 4/127 (3%)
 Strand = Plus / Plus

                                                                            
Query: 1        tccaatggaatcccaactccctttcttttggatttccattctattnagatatggtgtatg 60
                |||||||||||||| |||||||||||||| ||||||| ||||||| || |||||    ||
Sbjct: 10341643 tccaatggaatcccgactccctttctttttgatttcctttctatttaggtatgg----tg 10341698

                                                                            
Query: 61       tagatctaattcttatataaagaaaactttatcgtttcactttgtctcgctttctctaga 120
                 |||  ||||||||||| ||| |||||| | ||| |||||||||||||  ||||||||||
Sbjct: 10341699 gagacataattcttatagaaacaaaactctctcgcttcactttgtctcattttctctaga 10341758

                       
Query: 121      atctcta 127
                |||||||
Sbjct: 10341759 atctcta 10341765



 Score = 93.7 bits (47), Expect = 1e-16
 Identities = 107/127 (84%), Gaps = 4/127 (3%)
 Strand = Plus / Minus

                                                                            
Query: 1        tccaatggaatcccaactccctttcttttggatttccattctattnagatatggtgtatg 60
                |||||||||||||| || ||||||||||| ||||||| ||||||| || |||||    ||
Sbjct: 19944769 tccaatggaatcccgaccccctttctttttgatttcctttctatttaggtatgg----tg 19944714

                                                                            
Query: 61       tagatctaattcttatataaagaaaactttatcgtttcactttgtctcgctttctctaga 120
                 |||  ||||||||||| ||| |||||| | ||| |||||||||||||  ||||||||||
Sbjct: 19944713 gagacataattcttatagaaacaaaactctctcgcttcactttgtctcattttctctaga 19944654

                       
Query: 121      atctcta 127
                |||||||
Sbjct: 19944653 atctcta 19944647



 Score = 38.2 bits (19), Expect = 6.5
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                       
Query: 21       ctttcttttggatttccattcta 43
                |||||| ||||||||||||||||
Sbjct: 22681875 ctttctcttggatttccattcta 22681853
to top
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score =  101 bits (51), Expect = 5e-19
 Identities = 108/127 (85%), Gaps = 4/127 (3%)
 Strand = Plus / Plus

                                                                            
Query: 1        tccaatggaatcccaactccctttcttttggatttccattctattnagatatggtgtatg 60
                |||||||||||||| |||||||||||||| ||||||| ||||||| || |||||    ||
Sbjct: 10347682 tccaatggaatcccgactccctttctttttgatttcctttctatttaggtatgg----tg 10347737

                                                                            
Query: 61       tagatctaattcttatataaagaaaactttatcgtttcactttgtctcgctttctctaga 120
                 |||  ||||||||||| ||| |||||| | ||| |||||||||||||  ||||||||||
Sbjct: 10347738 gagacataattcttatagaaacaaaactctctcgcttcactttgtctcattttctctaga 10347797

                       
Query: 121      atctcta 127
                |||||||
Sbjct: 10347798 atctcta 10347804



 Score = 93.7 bits (47), Expect = 1e-16
 Identities = 107/127 (84%), Gaps = 4/127 (3%)
 Strand = Plus / Minus

                                                                            
Query: 1        tccaatggaatcccaactccctttcttttggatttccattctattnagatatggtgtatg 60
                |||||||||||||| || ||||||||||| ||||||| ||||||| || |||||    ||
Sbjct: 19956045 tccaatggaatcccgaccccctttctttttgatttcctttctatttaggtatgg----tg 19955990

                                                                            
Query: 61       tagatctaattcttatataaagaaaactttatcgtttcactttgtctcgctttctctaga 120
                 |||  ||||||||||| ||| |||||| | ||| |||||||||||||  ||||||||||
Sbjct: 19955989 gagacataattcttatagaaacaaaactctctcgcttcactttgtctcattttctctaga 19955930

                       
Query: 121      atctcta 127
                |||||||
Sbjct: 19955929 atctcta 19955923



 Score = 38.2 bits (19), Expect = 6.5
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                       
Query: 21       ctttcttttggatttccattcta 43
                |||||| ||||||||||||||||
Sbjct: 22694343 ctttctcttggatttccattcta 22694321
to top
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  101 bits (51), Expect = 5e-19
 Identities = 108/127 (85%), Gaps = 4/127 (3%)
 Strand = Plus / Plus

                                                                           
Query: 1       tccaatggaatcccaactccctttcttttggatttccattctattnagatatggtgtatg 60
               |||||||||||||| |||||||||||||| ||||||| ||||||| || |||||    ||
Sbjct: 5608860 tccaatggaatcccgactccctttctttttgatttcctttctatttaggtatgg----tg 5608915

                                                                           
Query: 61      tagatctaattcttatataaagaaaactttatcgtttcactttgtctcgctttctctaga 120
                |||  ||||||||||| ||| |||||| | ||| |||||||||||||  ||||||||||
Sbjct: 5608916 gagacataattcttatagaaacaaaactctctcgcttcactttgtctcattttctctaga 5608975

                      
Query: 121     atctcta 127
               |||||||
Sbjct: 5608976 atctcta 5608982



 Score = 85.7 bits (43), Expect = 3e-14
 Identities = 106/127 (83%), Gaps = 4/127 (3%)
 Strand = Plus / Plus

                                                                            
Query: 1        tccaatggaatcccaactccctttcttttggatttccattctattnagatatggtgtatg 60
                |||||||||||||| ||||||||||||||  |||||| ||||||| || |||||    ||
Sbjct: 11285666 tccaatggaatcccgactccctttcttttttatttcctttctatttaggtatgg----tg 11285721

                                                                            
Query: 61       tagatctaattcttatataaagaaaactttatcgtttcactttgtctcgctttctctaga 120
                 |||  ||||||||||| ||| |||||| | ||| ||||| |||||||  ||||||||||
Sbjct: 11285722 gagacataattcttatagaaacaaaactctctcgcttcacgttgtctcattttctctaga 11285781

                       
Query: 121      atctcta 127
                |||||||
Sbjct: 11285782 atctcta 11285788
to top
>emb|BX000560.1|CNS08CE6 Oryza sativa chromosome 12, . BAC OSJNBa0021D06 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 139684

 Score =  101 bits (51), Expect = 5e-19
 Identities = 108/127 (85%), Gaps = 4/127 (3%)
 Strand = Plus / Minus

                                                                         
Query: 1     tccaatggaatcccaactccctttcttttggatttccattctattnagatatggtgtatg 60
             |||||||||||||| |||||||||||||| ||||||| ||||||| || |||||    ||
Sbjct: 44014 tccaatggaatcccgactccctttctttttgatttcctttctatttaggtatgg----tg 43959

                                                                         
Query: 61    tagatctaattcttatataaagaaaactttatcgtttcactttgtctcgctttctctaga 120
              |||  ||||||||||| ||| |||||| | ||| |||||||||||||  ||||||||||
Sbjct: 43958 gagacataattcttatagaaacaaaactctctcgcttcactttgtctcattttctctaga 43899

                    
Query: 121   atctcta 127
             |||||||
Sbjct: 43898 atctcta 43892
to top
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome
          Length = 141182

 Score =  101 bits (51), Expect = 5e-19
 Identities = 108/127 (85%), Gaps = 4/127 (3%)
 Strand = Plus / Plus

                                                                         
Query: 1     tccaatggaatcccaactccctttcttttggatttccattctattnagatatggtgtatg 60
             ||||||| |||||| |||  | ||||||| ||||||| ||||||| |||||||    || 
Sbjct: 52930 tccaatgtaatccccacttgccttctttttgatttcccttctatttagatatg----ata 52985

                                                                         
Query: 61    tagatctaattcttatataaagaaaactttatcgtttcactttgtctcgctttctctaga 120
             |||| |||||||||||| |||||||||| | ||| ||||||||||||| |||||||||||
Sbjct: 52986 tagacctaattcttatacaaagaaaactctttcgcttcactttgtctcactttctctaga 53045

                    
Query: 121   atctcta 127
             |||||||
Sbjct: 53046 atctcta 53052
to top
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast,
             complete genome
          Length = 134551

 Score = 93.7 bits (47), Expect = 1e-16
 Identities = 107/127 (84%), Gaps = 4/127 (3%)
 Strand = Plus / Plus

                                                                         
Query: 1     tccaatggaatcccaactccctttcttttggatttccattctattnagatatggtgtatg 60
             |||||||||||||| || ||||||||||| ||||||| ||||||| || ||||||| |  
Sbjct: 49833 tccaatggaatcccgaccccctttctttttgatttcctttctatttaggtatggtgga-- 49890

                                                                         
Query: 61    tagatctaattcttatataaagaaaactttatcgtttcactttgtctcgctttctctaga 120
               ||  ||||||||||| ||| |||||| | ||| |||||||||||||  ||||||||||
Sbjct: 49891 --gacataattcttatagaaacaaaactctctcgcttcactttgtctcattttctctaga 49948

                    
Query: 121   atctcta 127
             |||||||
Sbjct: 49949 atctcta 49955
to top
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast,
             complete genome
          Length = 134551

 Score = 93.7 bits (47), Expect = 1e-16
 Identities = 107/127 (84%), Gaps = 4/127 (3%)
 Strand = Plus / Plus

                                                                         
Query: 1     tccaatggaatcccaactccctttcttttggatttccattctattnagatatggtgtatg 60
             |||||||||||||| || ||||||||||| ||||||| ||||||| || ||||||| |  
Sbjct: 49833 tccaatggaatcccgaccccctttctttttgatttcctttctatttaggtatggtgga-- 49890

                                                                         
Query: 61    tagatctaattcttatataaagaaaactttatcgtttcactttgtctcgctttctctaga 120
               ||  ||||||||||| ||| |||||| | ||| |||||||||||||  ||||||||||
Sbjct: 49891 --gacataattcttatagaaacaaaactctctcgcttcactttgtctcattttctctaga 49948

                    
Query: 121   atctcta 127
             |||||||
Sbjct: 49949 atctcta 49955
to top
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome
          Length = 134525

 Score = 93.7 bits (47), Expect = 1e-16
 Identities = 107/127 (84%), Gaps = 4/127 (3%)
 Strand = Plus / Plus

                                                                         
Query: 1     tccaatggaatcccaactccctttcttttggatttccattctattnagatatggtgtatg 60
             |||||||||||||| || ||||||||||| ||||||| ||||||| || ||||||| |  
Sbjct: 49839 tccaatggaatcccgaccccctttctttttgatttcctttctatttaggtatggtgga-- 49896

                                                                         
Query: 61    tagatctaattcttatataaagaaaactttatcgtttcactttgtctcgctttctctaga 120
               ||  ||||||||||| ||| |||||| | ||| |||||||||||||  ||||||||||
Sbjct: 49897 --gacataattcttatagaaacaaaactctctcgcttcactttgtctcattttctctaga 49954

                    
Query: 121   atctcta 127
             |||||||
Sbjct: 49955 atctcta 49961
to top
>emb|AL606447.3|OSJN00011 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0022F23,
             complete sequence
          Length = 130273

 Score = 93.7 bits (47), Expect = 1e-16
 Identities = 107/127 (84%), Gaps = 4/127 (3%)
 Strand = Plus / Plus

                                                                         
Query: 1     tccaatggaatcccaactccctttcttttggatttccattctattnagatatggtgtatg 60
             |||||| ||||||| |||||||||||||| ||||||| ||||||| || ||||||| |  
Sbjct: 78099 tccaatagaatcccgactccctttctttttgatttcctttctatttaggtatggtgga-- 78156

                                                                         
Query: 61    tagatctaattcttatataaagaaaactttatcgtttcactttgtctcgctttctctaga 120
               ||  ||||||||||| ||| |||||| | ||| |||||||||||||  ||||||||||
Sbjct: 78157 --gacataattcttatagaaacaaaactctctcgcttcactttgtctcattttctctaga 78214

                    
Query: 121   atctcta 127
             |||||||
Sbjct: 78215 atctcta 78221
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 93.7 bits (47), Expect = 1e-16
 Identities = 107/127 (84%), Gaps = 4/127 (3%)
 Strand = Plus / Plus

                                                                            
Query: 1        tccaatggaatcccaactccctttcttttggatttccattctattnagatatggtgtatg 60
                |||||| ||||||| |||||||||||||| ||||||| ||||||| || ||||||| |  
Sbjct: 23635418 tccaatagaatcccgactccctttctttttgatttcctttctatttaggtatggtgga-- 23635475

                                                                            
Query: 61       tagatctaattcttatataaagaaaactttatcgtttcactttgtctcgctttctctaga 120
                  ||  ||||||||||| ||| |||||| | ||| |||||||||||||  ||||||||||
Sbjct: 23635476 --gacataattcttatagaaacaaaactctctcgcttcactttgtctcattttctctaga 23635533

                       
Query: 121      atctcta 127
                |||||||
Sbjct: 23635534 atctcta 23635540



 Score = 38.2 bits (19), Expect = 6.5
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                      
Query: 21      ctttcttttggatttccattcta 43
               |||||| ||||||||||||||||
Sbjct: 7885852 ctttctcttggatttccattcta 7885874
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 93.7 bits (47), Expect = 1e-16
 Identities = 107/127 (84%), Gaps = 4/127 (3%)
 Strand = Plus / Minus

                                                                            
Query: 1        tccaatggaatcccaactccctttcttttggatttccattctattnagatatggtgtatg 60
                |||||||||||||  |||||||||||||| ||||||| ||||||| || |||||    ||
Sbjct: 12588945 tccaatggaatcctgactccctttctttttgatttcctttctatttaggtatgg----tg 12588890

                                                                            
Query: 61       tagatctaattcttatataaagaaaactttatcgtttcactttgtctcgctttctctaga 120
                 |||  ||||||||||| ||| |||||| | ||| |||||||||||||  ||||||||||
Sbjct: 12588889 gagacataattcttatagaaacaaaactctctcgcttcactttgtctcattttctctaga 12588830

                       
Query: 121      atctcta 127
                |||||||
Sbjct: 12588829 atctcta 12588823



 Score = 48.1 bits (24), Expect = 0.007
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                                
Query: 96       ttcactttgtctcgctttctctagaatctcta 127
                |||||||||||||  |||||||||||||||||
Sbjct: 23209172 ttcactttgtctcattttctctagaatctcta 23209141
to top
>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete
             sequence
          Length = 116932

 Score = 93.7 bits (47), Expect = 1e-16
 Identities = 107/127 (84%), Gaps = 4/127 (3%)
 Strand = Plus / Plus

                                                                         
Query: 1     tccaatggaatcccaactccctttcttttggatttccattctattnagatatggtgtatg 60
             |||||||||||||| || ||||||||||| ||||||| ||||||| || ||||||| |  
Sbjct: 41274 tccaatggaatcccgaccccctttctttttgatttcctttctatttaggtatggtgga-- 41331

                                                                         
Query: 61    tagatctaattcttatataaagaaaactttatcgtttcactttgtctcgctttctctaga 120
               ||  ||||||||||| ||| |||||| | ||| |||||||||||||  ||||||||||
Sbjct: 41332 --gacataattcttatagaaacaaaactctctcgcttcactttgtctcattttctctaga 41389

                    
Query: 121   atctcta 127
             |||||||
Sbjct: 41390 atctcta 41396
to top
>dbj|AP004757.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0652D10
          Length = 156744

 Score = 93.7 bits (47), Expect = 1e-16
 Identities = 107/127 (84%), Gaps = 4/127 (3%)
 Strand = Plus / Minus

                                                                         
Query: 1     tccaatggaatcccaactccctttcttttggatttccattctattnagatatggtgtatg 60
             |||||||||||||  |||||||||||||| ||||||| ||||||| || |||||    ||
Sbjct: 71258 tccaatggaatcctgactccctttctttttgatttcctttctatttaggtatgg----tg 71203

                                                                         
Query: 61    tagatctaattcttatataaagaaaactttatcgtttcactttgtctcgctttctctaga 120
              |||  ||||||||||| ||| |||||| | ||| |||||||||||||  ||||||||||
Sbjct: 71202 gagacataattcttatagaaacaaaactctctcgcttcactttgtctcattttctctaga 71143

                    
Query: 121   atctcta 127
             |||||||
Sbjct: 71142 atctcta 71136
to top
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome
          Length = 134494

 Score = 93.7 bits (47), Expect = 1e-16
 Identities = 107/127 (84%), Gaps = 4/127 (3%)
 Strand = Plus / Plus

                                                                         
Query: 1     tccaatggaatcccaactccctttcttttggatttccattctattnagatatggtgtatg 60
             |||||||||||||| |||||||||||||| ||||| | ||||||| || ||||||| |  
Sbjct: 49760 tccaatggaatcccgactccctttctttttgatttactttctatttaggtatggtgga-- 49817

                                                                         
Query: 61    tagatctaattcttatataaagaaaactttatcgtttcactttgtctcgctttctctaga 120
               ||  ||||||||||| ||| |||||| | ||| |||||||||||||  ||||||||||
Sbjct: 49818 --gacataattcttatagaaacaaaactctctcgcttcactttgtctcattttctctaga 49875

                    
Query: 121   atctcta 127
             |||||||
Sbjct: 49876 atctcta 49882
to top
>emb|BX119951.3|CNS09S4U Oryza sativa chromosome 12, . BAC OJ1523_A01 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 127267

 Score = 85.7 bits (43), Expect = 3e-14
 Identities = 106/127 (83%), Gaps = 4/127 (3%)
 Strand = Plus / Minus

                                                                         
Query: 1     tccaatggaatcccaactccctttcttttggatttccattctattnagatatggtgtatg 60
             |||||||||||||| ||||||||||||||  |||||| ||||||| || |||||    ||
Sbjct: 86059 tccaatggaatcccgactccctttcttttttatttcctttctatttaggtatgg----tg 86004

                                                                         
Query: 61    tagatctaattcttatataaagaaaactttatcgtttcactttgtctcgctttctctaga 120
              |||  ||||||||||| ||| |||||| | ||| ||||| |||||||  ||||||||||
Sbjct: 86003 gagacataattcttatagaaacaaaactctctcgcttcacgttgtctcattttctctaga 85944

                    
Query: 121   atctcta 127
             |||||||
Sbjct: 85943 atctcta 85937
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 48.1 bits (24), Expect = 0.007
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                               
Query: 96      ttcactttgtctcgctttctctagaatctcta 127
               |||||||||||||  |||||||||||||||||
Sbjct: 8142738 ttcactttgtctcattttctctagaatctcta 8142769
to top
>dbj|AP005004.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0503B05
          Length = 156814

 Score = 48.1 bits (24), Expect = 0.007
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                              
Query: 96     ttcactttgtctcgctttctctagaatctcta 127
              |||||||||||||  |||||||||||||||||
Sbjct: 130931 ttcactttgtctcattttctctagaatctcta 130962
to top
>dbj|AP004236.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0417D05
          Length = 165752

 Score = 48.1 bits (24), Expect = 0.007
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                              
Query: 96     ttcactttgtctcgctttctctagaatctcta 127
              |||||||||||||  |||||||||||||||||
Sbjct: 159820 ttcactttgtctcattttctctagaatctcta 159789
to top
>dbj|AP003623.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0642B07
          Length = 139297

 Score = 48.1 bits (24), Expect = 0.007
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                             
Query: 96    ttcactttgtctcgctttctctagaatctcta 127
             |||||||||||||  |||||||||||||||||
Sbjct: 43934 ttcactttgtctcattttctctagaatctcta 43903
to top
>emb|AL645926.16| Zebrafish DNA sequence from clone RP71-1G24, complete sequence
          Length = 141213

 Score = 46.1 bits (23), Expect = 0.027
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 81    agaaaactttatcgtttcacttt 103
             |||||||||||||||||||||||
Sbjct: 10933 agaaaactttatcgtttcacttt 10955
to top
>gb|DP000044.2| Callithrix jacchus target 106 genomic scaffold
          Length = 574594

 Score = 42.1 bits (21), Expect = 0.42
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 67     taattcttatataaagaaaac 87
              |||||||||||||||||||||
Sbjct: 345781 taattcttatataaagaaaac 345801
to top
>gb|AC149804.11| Medicago truncatula clone mth2-73h22, complete sequence
          Length = 121763

 Score = 42.1 bits (21), Expect = 0.42
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 72    cttatataaagaaaactttat 92
             |||||||||||||||||||||
Sbjct: 48652 cttatataaagaaaactttat 48672
to top
>gb|AY312507.1| Thelohania solenopsae isolate LA 2 small subunit ribosomal RNA
           gene, partial sequence; internal transcribed spacer,
           complete sequence; and large subunit ribosomal RNA gene,
           partial sequence
          Length = 318

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 67  taattcttatataaagaaaa 86
           ||||||||||||||||||||
Sbjct: 165 taattcttatataaagaaaa 146
to top
>gb|AY312506.1| Thelohania solenopsae isolate Florida small subunit ribosomal RNA
           gene, partial sequence; internal transcribed spacer,
           complete sequence; and large subunit ribosomal RNA gene,
           partial sequence
          Length = 339

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 67  taattcttatataaagaaaa 86
           ||||||||||||||||||||
Sbjct: 176 taattcttatataaagaaaa 157
to top
>gb|AY312505.1| Thelohania solenopsae isolate Texas 3430 small subunit ribosomal
           RNA gene, partial sequence; internal transcribed spacer,
           complete sequence; and large subunit ribosomal RNA gene,
           partial sequence
          Length = 317

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 67  taattcttatataaagaaaa 86
           ||||||||||||||||||||
Sbjct: 158 taattcttatataaagaaaa 139
to top
>gb|AY312504.1| Thelohania solenopsae isolate Texas 3427 small subunit ribosomal
           RNA gene, partial sequence; internal transcribed spacer,
           complete sequence; and large subunit ribosomal RNA gene,
           partial sequence
          Length = 330

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 67  taattcttatataaagaaaa 86
           ||||||||||||||||||||
Sbjct: 175 taattcttatataaagaaaa 156
to top
>gb|AY312503.1| Thelohania solenopsae isolate Texas 3344 small subunit ribosomal
           RNA gene, partial sequence; internal transcribed spacer,
           complete sequence; and large subunit ribosomal RNA gene,
           partial sequence
          Length = 283

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 67  taattcttatataaagaaaa 86
           ||||||||||||||||||||
Sbjct: 151 taattcttatataaagaaaa 132
to top
>gb|AY312502.1| Thelohania solenopsae isolate Texas 3362 small subunit ribosomal RNA
            gene, partial sequence; internal transcribed spacer,
            complete sequence; and large subunit ribosomal RNA gene,
            partial sequence
          Length = 1726

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 67   taattcttatataaagaaaa 86
            ||||||||||||||||||||
Sbjct: 1255 taattcttatataaagaaaa 1236
to top
>emb|CR932579.1|CNS0KYB9 Paramecium tetraurelia, Small GTPase rab, putative, complete gene
          Length = 3001

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 26   ttttggatttccattctatt 45
            ||||||||||||||||||||
Sbjct: 1847 ttttggatttccattctatt 1828
to top
>gb|AC053481.13| Homo sapiens chromosome 17, clone RP11-51L5, complete sequence
          Length = 176235

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 67    taattcttatataaagaaaacttt 90
             |||| |||||||||||||||||||
Sbjct: 18979 taatacttatataaagaaaacttt 19002
to top
>gb|AC008026.7| Homo sapiens chromosome 17, clone RP11-464D20, complete sequence
          Length = 220184

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 67     taattcttatataaagaaaacttt 90
              |||| |||||||||||||||||||
Sbjct: 177211 taatacttatataaagaaaacttt 177234
to top
>dbj|AP006197.1| Homo sapiens genomic DNA, chromosome 6, clone:RP11-360J22, complete
             sequence
          Length = 159320

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 70    ttcttatataaagaaaactt 89
             ||||||||||||||||||||
Sbjct: 49813 ttcttatataaagaaaactt 49794
to top
>dbj|AP006195.1| Homo sapiens genomic DNA, chromosome 6, clone:RP11-278C16, complete
              sequence
          Length = 157800

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 70     ttcttatataaagaaaactt 89
              ||||||||||||||||||||
Sbjct: 128118 ttcttatataaagaaaactt 128099
to top
>emb|AL359174.14| Human DNA sequence from clone RP11-423D17 on chromosome 6, complete
            sequence
          Length = 146372

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 70   ttcttatataaagaaaactt 89
            ||||||||||||||||||||
Sbjct: 6974 ttcttatataaagaaaactt 6955
to top
>dbj|AB041992.1| Homo sapiens genomic DNA, chromosome 6q21, clone:576A9, complete
             sequence
          Length = 112519

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 70    ttcttatataaagaaaactt 89
             ||||||||||||||||||||
Sbjct: 83995 ttcttatataaagaaaactt 83976
to top
>dbj|AP002529.1| Homo sapiens genomic DNA, chromosome 6q21, anti-oncogene region, section
              2/4
          Length = 300000

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 70     ttcttatataaagaaaactt 89
              ||||||||||||||||||||
Sbjct: 284290 ttcttatataaagaaaactt 284271
to top
>dbj|AB041512.1| Homo sapiens genomic DNA, chromosome 6q21, clone:520L4, complete
            sequence
          Length = 102910

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 70   ttcttatataaagaaaactt 89
            ||||||||||||||||||||
Sbjct: 4280 ttcttatataaagaaaactt 4261
to top
>ref|XM_474910.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 9603

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 21   ctttcttttggatttccattcta 43
            |||||| ||||||||||||||||
Sbjct: 2241 ctttctcttggatttccattcta 2263
to top
>gb|AY430372.1| Dicentrarchus labrax clone DLA0142 microsatellite sequence
          Length = 348

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 27  tttggatttccattctatt 45
           |||||||||||||||||||
Sbjct: 186 tttggatttccattctatt 204
to top
>gb|AC132290.3| Mus musculus BAC clone RP24-318H2 from chromosome 10, complete sequence
          Length = 152306

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 7     ggaatcccaactccctttc 25
             |||||||||||||||||||
Sbjct: 93237 ggaatcccaactccctttc 93255
to top
>emb|CR293498.12| Zebrafish DNA sequence from clone DKEY-5I16 in linkage group 23,
            complete sequence
          Length = 147189

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 22   tttcttttggatttccattctat 44
            |||||||||||||| ||||||||
Sbjct: 6181 tttcttttggattttcattctat 6159
to top
>emb|BX927318.10| Zebrafish DNA sequence from clone DKEY-159N16 in linkage group 23,
             complete sequence
          Length = 149430

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 22    tttcttttggatttccattctat 44
             |||||||||||||| ||||||||
Sbjct: 69889 tttcttttggattttcattctat 69867
to top
>gb|AC155955.2| Xenopus tropicalis clone CH216-151P9, complete sequence
          Length = 166977

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 74     tatataaagaaaactttat 92
              |||||||||||||||||||
Sbjct: 101027 tatataaagaaaactttat 101009
to top
>gb|AC123687.20| Mus musculus chromosome 5, clone RP23-314A12, complete sequence
          Length = 189230

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 73    ttatataaagaaaacttta 91
             |||||||||||||||||||
Sbjct: 77493 ttatataaagaaaacttta 77475
to top
>gb|AC147006.18| Medicago truncatula clone mth2-62m1, complete sequence
          Length = 126833

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 55     tgtatgtagatctaattct 73
              |||||||||||||||||||
Sbjct: 108710 tgtatgtagatctaattct 108692
to top
>emb|AL355272.3| Human DNA sequence from clone RP5-955L16 on chromosome 6 contains the
             gene for a novel RFX DNA binding domain containing protein
             and a CpG island, complete sequence
          Length = 105463

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 77    ataaagaaaactttatcgtttca 99
             ||||||||||||||||| |||||
Sbjct: 13474 ataaagaaaactttatcatttca 13452
to top
>emb|AL136461.10| Human DNA sequence from clone RP11-32G22 on chromosome 20 Contains part
             of the PTPRT gene for protein tyrosine phosphatase
             receptor type T, ESTs, STSs and GSSs, complete sequence
          Length = 48860

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 70    ttcttatataaagaaaactttat 92
             |||||||||||||||| ||||||
Sbjct: 44028 ttcttatataaagaaatctttat 44006
to top
>emb|AL031121.5|HS495O10 Human DNA sequence from clone RP3-495O10 on chromosome 6q26-27
            Contains an RPL37A (60S Ribosomal Protein L37A)
            pseudogene and the 3' end of the gene for a novel protein
            (FLJ32724), complete sequence
          Length = 187908

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 73   ttatataaagaaaacttta 91
            |||||||||||||||||||
Sbjct: 9507 ttatataaagaaaacttta 9489
to top
>emb|AL596025.22| Mouse DNA sequence from clone RP23-215H18 on chromosome 11 Contains a
             novel gene and the 3' end of a gene that is a possible
             ortholog of human dynein axonemal heavy polypeptide 9
             (DNAH9), complete sequence
          Length = 190066

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 18    tccctttcttttggatttc 36
             |||||||||||||||||||
Sbjct: 26063 tccctttcttttggatttc 26081
to top
>emb|AL662948.4|OSJN00150 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0060B20,
             complete sequence
          Length = 147254

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 21    ctttcttttggatttccattcta 43
             |||||| ||||||||||||||||
Sbjct: 91549 ctttctcttggatttccattcta 91571
to top
>emb|AL161513.2|ATCHRIV25 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 25
          Length = 179771

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 109    gctttctctagaatctcta 127
              |||||||||||||||||||
Sbjct: 142295 gctttctctagaatctcta 142277
to top
>gb|AC161426.5| Mus musculus BAC clone RP23-69L13 from chromosome 10, complete sequence
          Length = 255667

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 7     ggaatcccaactccctttc 25
             |||||||||||||||||||
Sbjct: 63897 ggaatcccaactccctttc 63915
to top
>gb|AC008951.6| Homo sapiens chromosome 5 clone CTD-2337A12, complete sequence
          Length = 124151

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                   
Query: 116   ctagaatctctatnaaaaaaga 137
             ||||||||||||| ||||||||
Sbjct: 89824 ctagaatctctattaaaaaaga 89803
to top
>gb|AC025460.7| Homo sapiens chromosome 5 clone CTD-2235E24, complete sequence
          Length = 214636

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 11     tcccaactccctttctttt 29
              |||||||||||||||||||
Sbjct: 208361 tcccaactccctttctttt 208379
to top
>gb|AC155952.2| Xenopus tropicalis clone CH216-120G20, complete sequence
          Length = 169117

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 74    tatataaagaaaactttat 92
             |||||||||||||||||||
Sbjct: 54162 tatataaagaaaactttat 54144
to top
>gb|AC018727.10| Oryza sativa chromosome 10 BAC OSJNBa0056G17 genomic sequence, complete
              sequence
          Length = 139999

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 21     ctttcttttggatttccattcta 43
              |||||| ||||||||||||||||
Sbjct: 136544 ctttctcttggatttccattcta 136522
to top
>gb|AC012673.37| Homo sapiens 12 BAC RP11-431G15 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 47302

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 67    taattcttatataaagaaa 85
             |||||||||||||||||||
Sbjct: 37911 taattcttatataaagaaa 37929
to top
>gb|AC008329.3|AC008329 Drosophila melanogaster, chromosome 2L, region 28C-28D, BAC clone
             BACR31D05, complete sequence
          Length = 172633

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 68    aattcttatataaagaaaacttt 90
             |||| ||||||||||||||||||
Sbjct: 91840 aattgttatataaagaaaacttt 91818
to top
>emb|BX649401.4| Zebrafish DNA sequence from clone DKEY-48E10 in linkage group 4, complete
              sequence
          Length = 211817

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 64     atctaattcttatataaag 82
              |||||||||||||||||||
Sbjct: 149357 atctaattcttatataaag 149339
to top
>gb|AC154436.2| Mus musculus BAC clone RP24-192B24 from chromosome 14, complete
             sequence
          Length = 180476

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                        
Query: 92    tcgtttcactttgtctcgctttctcta 118
             |||||||||||||||  ||||||||||
Sbjct: 16186 tcgtttcactttgtcaagctttctcta 16160
to top
>gb|AC096709.19| Homo sapiens chromosome 18, clone RP11-707P24, complete sequence
          Length = 199285

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 74    tatataaagaaaactttat 92
             |||||||||||||||||||
Sbjct: 20661 tatataaagaaaactttat 20643
to top
>gb|AC125005.15| Mus musculus chromosome 5, clone RP23-370D2, complete sequence
          Length = 176900

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 73     ttatataaagaaaacttta 91
              |||||||||||||||||||
Sbjct: 109557 ttatataaagaaaacttta 109575
to top
>emb|AL928932.14| Mouse DNA sequence from clone RP24-235B14 on chromosome 4, complete
              sequence
          Length = 201761

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 69     attcttatataaagaaaac 87
              |||||||||||||||||||
Sbjct: 103917 attcttatataaagaaaac 103935
to top
>emb|AL929222.6| Zebrafish DNA sequence from clone DKEY-31N5, complete sequence
          Length = 212599

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 14   caactccctttcttttgga 32
            |||||||||||||||||||
Sbjct: 3118 caactccctttcttttgga 3136
to top
>dbj|AK103472.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033130B05, full
            insert sequence
          Length = 2964

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 21   ctttcttttggatttccattcta 43
            |||||| ||||||||||||||||
Sbjct: 2392 ctttctcttggatttccattcta 2414
to top
>emb|BX547928.7| Zebrafish DNA sequence from clone DKEY-172O10 in linkage group 4,
             complete sequence
          Length = 228177

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 64    atctaattcttatataaag 82
             |||||||||||||||||||
Sbjct: 62409 atctaattcttatataaag 62427
to top
>emb|CT025669.8| Zebrafish DNA sequence from clone DKEY-256E21 in linkage group 4,
             complete sequence
          Length = 111887

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 22    tttcttttggatttccattctat 44
             |||||||||||||| ||||||||
Sbjct: 18872 tttcttttggattttcattctat 18850
to top
>gb|AE003619.3| Drosophila melanogaster chromosome 2L, section 28 of 83 of the complete
             sequence
          Length = 289516

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 68    aattcttatataaagaaaacttt 90
             |||| ||||||||||||||||||
Sbjct: 62230 aattgttatataaagaaaacttt 62208
to top
>gb|AF128396.1|T3H13 Arabidopsis thaliana BAC T3H13
          Length = 118737

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 109    gctttctctagaatctcta 127
              |||||||||||||||||||
Sbjct: 108589 gctttctctagaatctcta 108571
to top
>gb|AC005359.1|AC005359 REVERSE-COMPLEMENT OF: F23J3.GCG.SEQ  CHECK: 2754  FROM: 1  TO:
            93489, complete sequence
          Length = 93489

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 109  gctttctctagaatctcta 127
            |||||||||||||||||||
Sbjct: 7499 gctttctctagaatctcta 7481
to top
>emb|CT025528.10| Mouse DNA sequence from clone RP23-205O23 on chromosome 14, complete
              sequence
          Length = 224168

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                         
Query: 92     tcgtttcactttgtctcgctttctcta 118
              |||||||||||||||  ||||||||||
Sbjct: 159514 tcgtttcactttgtcaagctttctcta 159488


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,618,487
Number of Sequences: 3902068
Number of extensions: 1618487
Number of successful extensions: 122549
Number of sequences better than 10.0: 81
Number of HSP's better than 10.0 without gapping: 89
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 121874
Number of HSP's gapped (non-prelim): 675
length of query: 137
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 116
effective length of database: 17,151,101,840
effective search space: 1989527813440
effective search space used: 1989527813440
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
to top