ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd16e06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1YCX4_OENHO (Q9MTN4) Hypothetical 8.4 kDa protein in ycf9-trnS in... 107 2e-23
2PSBZ_WHEAT (P69695) Photosystem II reaction center Z protein 103 3e-22
3PSBZ_SACOF (Q6ENX9) Photosystem II reaction center Z protein 103 3e-22
4PSBZ_SACHY (Q6L3B0) Photosystem II reaction center Z protein 103 3e-22
5PSBZ_HORVU (P69696) Photosystem II reaction center Z protein 103 3e-22
6PSBZ_ORYSA (P12194) Photosystem II reaction center Z protein 102 8e-22
7PSBZ_ORYNI (Q6ENI9) Photosystem II reaction center Z protein 102 8e-22
8PSBZ_CALFE (Q7YJX5) Photosystem II reaction center Z protein 99 9e-21
9PSBZ_ACOGR (Q5QA82) Photosystem II reaction center Z protein 99 9e-21
10PSBZ_SPIOL (Q9M3M6) Photosystem II reaction center Z protein 98 2e-20
11PSBZ_PEA (Q32902) Photosystem II reaction center Z protein 98 2e-20
12PSBZ_ARATH (P56790) Photosystem II reaction center Z protein 97 3e-20
13PSBZ_PANGI (Q68S09) Photosystem II reaction center Z protein 97 3e-20
14PSBZ_OENHO (Q9MTN5) Photosystem II reaction center Z protein 97 3e-20
15PSBZ_NYMAL (Q6EW51) Photosystem II reaction center Z protein 97 3e-20
16PSBZ_LOTJA (Q9BBT2) Photosystem II reaction center Z protein 97 3e-20
17PSBZ_MAGTR (Q5IHA8) Photosystem II reaction center Z protein 96 5e-20
18PSBZ_MAGAC (Q5IHB0) Photosystem II reaction center Z protein 96 5e-20
19PSBZ_LIRTU (Q5IHA9) Photosystem II reaction center Z protein 96 5e-20
20PSBZ_TOBAC (P09974) Photosystem II reaction center Z protein 96 6e-20
21PSBZ_ATRBE (P59706) Photosystem II reaction center Z protein 96 6e-20
22PSBZ_AMBTC (Q70Y06) Photosystem II reaction center Z protein 96 7e-20
23PSBZ_MAIZE (Q33300) Photosystem II reaction center Z protein 94 3e-19
24PSBZ_ANTFO (P59705) Photosystem II reaction center Z protein 88 2e-17
25PSBZ_MARPO (P09973) Photosystem II reaction center Z protein 88 2e-17
26PSBZ_ADICA (Q85FM4) Photosystem II reaction center Z protein 84 2e-16
27PSBZ_PSINU (Q8WI21) Photosystem II reaction center Z protein 83 5e-16
28PSBZ_HUPLU (Q5SD09) Photosystem II reaction center Z protein 80 3e-15
29PSBZ_CRYJA (Q5IHA3) Photosystem II reaction center Z protein 80 4e-15
30PSBZ_PINTH (P41642) Photosystem II reaction center Z protein 79 9e-15
31PSBZ_CHAGL (Q8M9W6) Photosystem II reaction center Z protein 78 2e-14
32PSBZ_MESVI (Q9MUP9) Photosystem II reaction center Z protein 72 1e-12
33PSBZ_NEPOL (Q9TKX2) Photosystem II reaction center Z protein 65 1e-10
34PSBZ_CHLRE (P92276) Photosystem II reaction center Z protein 65 2e-10
35PSBZ_CHLVU (P56313) Photosystem II reaction center Z protein 64 2e-10
36PSBZ_SYNEL (Q8DHJ2) Photosystem II reaction center Z protein 60 5e-09
37PSBZ_GRATL (Q6B8V1) Photosystem II reaction center Z protein 60 6e-09
38PSBZ_PORPU (P51316) Photosystem II reaction center Z protein 58 2e-08
39PSBZ_CYAPA (P17159) Photosystem II reaction center Z protein 55 1e-07
40PSBZ_EUGGR (P32095) Photosystem II reaction center Z protein 54 3e-07
41PSBZ_ANASP (Q8YQ44) Photosystem II reaction center Z protein 54 3e-07
42PSBZ_SYNY3 (P73528) Photosystem II reaction center Z protein 51 3e-06
43PSBZ_GUITH (O78503) Photosystem II reaction center Z protein 49 1e-05
44PSBZ_CYAME (Q85FY1) Photosystem II reaction center Z protein 47 5e-05
45PSBZ_SYNP6 (Q5N0X7) Photosystem II reaction center Z protein 37 0.054
46PSBZ_SKECO (O96798) Photosystem II reaction center Z protein 37 0.054
47PSBZ_ODOSI (P49528) Photosystem II reaction center Z protein 33 0.46
48BCDO1_CHICK (Q9I993) Beta,beta-carotene 15,15'-monooxygenase (EC... 33 0.60
49PSBZ_EUGMY (Q8SL91) Photosystem II reaction center Z protein (Fr... 33 0.60
50PSBZ_EUGGA (Q8SL93) Photosystem II reaction center Z protein (Fr... 33 0.78
51SCN8A_HUMAN (Q9UQD0) Sodium channel protein type 8 alpha subunit... 31 2.3
52SCN8A_MOUSE (Q9WTU3) Sodium channel protein type 8 alpha subunit... 31 3.0
53PSBZ_EUGAN (Q8SL95) Photosystem II reaction center Z protein (Fr... 30 3.9
54TNP7_ECOLI (P13694) Transposase for transposon Tn3926 29 8.6 
>YCX4_OENHO (Q9MTN4) Hypothetical 8.4 kDa protein in ycf9-trnS intergenic|
           region (ORF75)
          Length = 75

 Score =  107 bits (267), Expect = 2e-23
 Identities = 52/61 (85%), Positives = 57/61 (93%)
 Frame = +1

Query: 148 KTSPIHNDVPENTTFLLFDQPSGEANTRGTLITKTEEVAINAKTANWKAIVIFLILQATI 327
           KT+PIHNDVPENTTFLL DQPSGEANT GTLI+K++EVAINAKTANWKAIV+ LILQAT 
Sbjct: 10  KTNPIHNDVPENTTFLLLDQPSGEANTTGTLISKSDEVAINAKTANWKAIVMLLILQATN 69

Query: 328 K 330
           K
Sbjct: 70  K 70
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>PSBZ_WHEAT (P69695) Photosystem II reaction center Z protein|
          Length = 62

 Score =  103 bits (258), Expect(2) = 3e-22
 Identities = 52/52 (100%), Positives = 52/52 (100%)
 Frame = -2

Query: 302 MTIAFQLAVFALIATSSVLVISVPLVFASPDGWSNNKNVVFSGTSLWIGLVF 147
           MTIAFQLAVFALIATSSVLVISVPLVFASPDGWSNNKNVVFSGTSLWIGLVF
Sbjct: 1   MTIAFQLAVFALIATSSVLVISVPLVFASPDGWSNNKNVVFSGTSLWIGLVF 52



 Score = 20.8 bits (42), Expect(2) = 3e-22
 Identities = 10/10 (100%), Positives = 10/10 (100%)
 Frame = -3

Query: 145 LVAILNSLIS 116
           LVAILNSLIS
Sbjct: 53  LVAILNSLIS 62
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>PSBZ_SACOF (Q6ENX9) Photosystem II reaction center Z protein|
          Length = 62

 Score =  103 bits (258), Expect(2) = 3e-22
 Identities = 52/52 (100%), Positives = 52/52 (100%)
 Frame = -2

Query: 302 MTIAFQLAVFALIATSSVLVISVPLVFASPDGWSNNKNVVFSGTSLWIGLVF 147
           MTIAFQLAVFALIATSSVLVISVPLVFASPDGWSNNKNVVFSGTSLWIGLVF
Sbjct: 1   MTIAFQLAVFALIATSSVLVISVPLVFASPDGWSNNKNVVFSGTSLWIGLVF 52



 Score = 20.8 bits (42), Expect(2) = 3e-22
 Identities = 10/10 (100%), Positives = 10/10 (100%)
 Frame = -3

Query: 145 LVAILNSLIS 116
           LVAILNSLIS
Sbjct: 53  LVAILNSLIS 62
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>PSBZ_SACHY (Q6L3B0) Photosystem II reaction center Z protein|
          Length = 62

 Score =  103 bits (258), Expect(2) = 3e-22
 Identities = 52/52 (100%), Positives = 52/52 (100%)
 Frame = -2

Query: 302 MTIAFQLAVFALIATSSVLVISVPLVFASPDGWSNNKNVVFSGTSLWIGLVF 147
           MTIAFQLAVFALIATSSVLVISVPLVFASPDGWSNNKNVVFSGTSLWIGLVF
Sbjct: 1   MTIAFQLAVFALIATSSVLVISVPLVFASPDGWSNNKNVVFSGTSLWIGLVF 52



 Score = 20.8 bits (42), Expect(2) = 3e-22
 Identities = 10/10 (100%), Positives = 10/10 (100%)
 Frame = -3

Query: 145 LVAILNSLIS 116
           LVAILNSLIS
Sbjct: 53  LVAILNSLIS 62
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>PSBZ_HORVU (P69696) Photosystem II reaction center Z protein|
          Length = 62

 Score =  103 bits (258), Expect(2) = 3e-22
 Identities = 52/52 (100%), Positives = 52/52 (100%)
 Frame = -2

Query: 302 MTIAFQLAVFALIATSSVLVISVPLVFASPDGWSNNKNVVFSGTSLWIGLVF 147
           MTIAFQLAVFALIATSSVLVISVPLVFASPDGWSNNKNVVFSGTSLWIGLVF
Sbjct: 1   MTIAFQLAVFALIATSSVLVISVPLVFASPDGWSNNKNVVFSGTSLWIGLVF 52



 Score = 20.8 bits (42), Expect(2) = 3e-22
 Identities = 10/10 (100%), Positives = 10/10 (100%)
 Frame = -3

Query: 145 LVAILNSLIS 116
           LVAILNSLIS
Sbjct: 53  LVAILNSLIS 62
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>PSBZ_ORYSA (P12194) Photosystem II reaction center Z protein|
          Length = 62

 Score =  102 bits (254), Expect(2) = 8e-22
 Identities = 51/52 (98%), Positives = 51/52 (98%)
 Frame = -2

Query: 302 MTIAFQLAVFALIATSSVLVISVPLVFASPDGWSNNKNVVFSGTSLWIGLVF 147
           MTIAFQLAVFALI TSSVLVISVPLVFASPDGWSNNKNVVFSGTSLWIGLVF
Sbjct: 1   MTIAFQLAVFALIVTSSVLVISVPLVFASPDGWSNNKNVVFSGTSLWIGLVF 52



 Score = 20.8 bits (42), Expect(2) = 8e-22
 Identities = 10/10 (100%), Positives = 10/10 (100%)
 Frame = -3

Query: 145 LVAILNSLIS 116
           LVAILNSLIS
Sbjct: 53  LVAILNSLIS 62
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>PSBZ_ORYNI (Q6ENI9) Photosystem II reaction center Z protein|
          Length = 62

 Score =  102 bits (254), Expect(2) = 8e-22
 Identities = 51/52 (98%), Positives = 51/52 (98%)
 Frame = -2

Query: 302 MTIAFQLAVFALIATSSVLVISVPLVFASPDGWSNNKNVVFSGTSLWIGLVF 147
           MTIAFQLAVFALI TSSVLVISVPLVFASPDGWSNNKNVVFSGTSLWIGLVF
Sbjct: 1   MTIAFQLAVFALIVTSSVLVISVPLVFASPDGWSNNKNVVFSGTSLWIGLVF 52



 Score = 20.8 bits (42), Expect(2) = 8e-22
 Identities = 10/10 (100%), Positives = 10/10 (100%)
 Frame = -3

Query: 145 LVAILNSLIS 116
           LVAILNSLIS
Sbjct: 53  LVAILNSLIS 62
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>PSBZ_CALFE (Q7YJX5) Photosystem II reaction center Z protein|
          Length = 62

 Score = 99.0 bits (245), Expect(2) = 9e-21
 Identities = 48/52 (92%), Positives = 51/52 (98%)
 Frame = -2

Query: 302 MTIAFQLAVFALIATSSVLVISVPLVFASPDGWSNNKNVVFSGTSLWIGLVF 147
           M IAFQLAVFALIATSS+L+ISVP+VFASPDGWSNNKNVVFSGTSLWIGLVF
Sbjct: 1   MIIAFQLAVFALIATSSILLISVPVVFASPDGWSNNKNVVFSGTSLWIGLVF 52



 Score = 20.8 bits (42), Expect(2) = 9e-21
 Identities = 10/10 (100%), Positives = 10/10 (100%)
 Frame = -3

Query: 145 LVAILNSLIS 116
           LVAILNSLIS
Sbjct: 53  LVAILNSLIS 62
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>PSBZ_ACOGR (Q5QA82) Photosystem II reaction center Z protein|
          Length = 62

 Score = 99.0 bits (245), Expect = 9e-21
 Identities = 47/52 (90%), Positives = 52/52 (100%)
 Frame = -2

Query: 302 MTIAFQLAVFALIATSSVLVISVPLVFASPDGWSNNKNVVFSGTSLWIGLVF 147
           MTIAFQLA+FALIATSS+L+ISVP+VFASPDGWS+NKNVVFSGTSLWIGLVF
Sbjct: 1   MTIAFQLAIFALIATSSILLISVPVVFASPDGWSSNKNVVFSGTSLWIGLVF 52
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>PSBZ_SPIOL (Q9M3M6) Photosystem II reaction center Z protein|
          Length = 62

 Score = 98.2 bits (243), Expect = 2e-20
 Identities = 46/52 (88%), Positives = 52/52 (100%)
 Frame = -2

Query: 302 MTIAFQLAVFALIATSSVLVISVPLVFASPDGWSNNKNVVFSGTSLWIGLVF 147
           MTIAFQLAVFALIATSS+L+ISVP+VFASPDGWS+NKN+VFSGTSLW+GLVF
Sbjct: 1   MTIAFQLAVFALIATSSILLISVPVVFASPDGWSSNKNIVFSGTSLWLGLVF 52
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>PSBZ_PEA (Q32902) Photosystem II reaction center Z protein|
          Length = 62

 Score = 97.8 bits (242), Expect = 2e-20
 Identities = 47/52 (90%), Positives = 51/52 (98%)
 Frame = -2

Query: 302 MTIAFQLAVFALIATSSVLVISVPLVFASPDGWSNNKNVVFSGTSLWIGLVF 147
           MTIAFQLAVFALI TSS+L+ISVP+VFASPDGWS+NKNVVFSGTSLWIGLVF
Sbjct: 1   MTIAFQLAVFALIVTSSILLISVPVVFASPDGWSSNKNVVFSGTSLWIGLVF 52
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>PSBZ_ARATH (P56790) Photosystem II reaction center Z protein|
          Length = 62

 Score = 97.4 bits (241), Expect = 3e-20
 Identities = 47/52 (90%), Positives = 51/52 (98%)
 Frame = -2

Query: 302 MTIAFQLAVFALIATSSVLVISVPLVFASPDGWSNNKNVVFSGTSLWIGLVF 147
           MTIAFQLAVFALI TSS+L+ISVP+VFASPDGWS+NKNVVFSGTSLWIGLVF
Sbjct: 1   MTIAFQLAVFALIITSSILLISVPVVFASPDGWSSNKNVVFSGTSLWIGLVF 52
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>PSBZ_PANGI (Q68S09) Photosystem II reaction center Z protein|
          Length = 62

 Score = 97.1 bits (240), Expect = 3e-20
 Identities = 46/52 (88%), Positives = 51/52 (98%)
 Frame = -2

Query: 302 MTIAFQLAVFALIATSSVLVISVPLVFASPDGWSNNKNVVFSGTSLWIGLVF 147
           MT+AFQLAVFALIATSS+L+I VP+VFASPDGWS+NKNVVFSGTSLWIGLVF
Sbjct: 1   MTLAFQLAVFALIATSSILLIGVPVVFASPDGWSSNKNVVFSGTSLWIGLVF 52
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>PSBZ_OENHO (Q9MTN5) Photosystem II reaction center Z protein|
          Length = 62

 Score = 97.1 bits (240), Expect = 3e-20
 Identities = 47/52 (90%), Positives = 52/52 (100%)
 Frame = -2

Query: 302 MTIAFQLAVFALIATSSVLVISVPLVFASPDGWSNNKNVVFSGTSLWIGLVF 147
           MTIAFQLAVFALIATSS+L+ISVP+VFASP+GWS+NKNVVFSGTSLWIGLVF
Sbjct: 1   MTIAFQLAVFALIATSSLLLISVPVVFASPEGWSSNKNVVFSGTSLWIGLVF 52
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>PSBZ_NYMAL (Q6EW51) Photosystem II reaction center Z protein|
          Length = 62

 Score = 97.1 bits (240), Expect = 3e-20
 Identities = 47/52 (90%), Positives = 51/52 (98%)
 Frame = -2

Query: 302 MTIAFQLAVFALIATSSVLVISVPLVFASPDGWSNNKNVVFSGTSLWIGLVF 147
           MTIAFQLAVFALIATSS+L+ISVP+VFASPDGWS+ KNVVFSGTSLWIGLVF
Sbjct: 1   MTIAFQLAVFALIATSSILLISVPVVFASPDGWSSKKNVVFSGTSLWIGLVF 52
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>PSBZ_LOTJA (Q9BBT2) Photosystem II reaction center Z protein|
          Length = 62

 Score = 97.1 bits (240), Expect = 3e-20
 Identities = 47/52 (90%), Positives = 51/52 (98%)
 Frame = -2

Query: 302 MTIAFQLAVFALIATSSVLVISVPLVFASPDGWSNNKNVVFSGTSLWIGLVF 147
           MTIAFQLAVFALIATSS+L+ISVP+VFASPDGWS+NKNVVFSGTSLWI LVF
Sbjct: 1   MTIAFQLAVFALIATSSILLISVPVVFASPDGWSSNKNVVFSGTSLWIALVF 52
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>PSBZ_MAGTR (Q5IHA8) Photosystem II reaction center Z protein|
          Length = 62

 Score = 96.3 bits (238), Expect(2) = 5e-20
 Identities = 47/52 (90%), Positives = 51/52 (98%)
 Frame = -2

Query: 302 MTIAFQLAVFALIATSSVLVISVPLVFASPDGWSNNKNVVFSGTSLWIGLVF 147
           MTIAFQLAVFALIATSS+L+ISVP+VFAS DGWS+NKNVVFSGTSLWIGLVF
Sbjct: 1   MTIAFQLAVFALIATSSILLISVPVVFASSDGWSSNKNVVFSGTSLWIGLVF 52



 Score = 20.8 bits (42), Expect(2) = 5e-20
 Identities = 10/10 (100%), Positives = 10/10 (100%)
 Frame = -3

Query: 145 LVAILNSLIS 116
           LVAILNSLIS
Sbjct: 53  LVAILNSLIS 62
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>PSBZ_MAGAC (Q5IHB0) Photosystem II reaction center Z protein|
          Length = 62

 Score = 96.3 bits (238), Expect(2) = 5e-20
 Identities = 47/52 (90%), Positives = 51/52 (98%)
 Frame = -2

Query: 302 MTIAFQLAVFALIATSSVLVISVPLVFASPDGWSNNKNVVFSGTSLWIGLVF 147
           MTIAFQLAVFALIATSS+L+ISVP+VFAS DGWS+NKNVVFSGTSLWIGLVF
Sbjct: 1   MTIAFQLAVFALIATSSILLISVPVVFASSDGWSSNKNVVFSGTSLWIGLVF 52



 Score = 20.8 bits (42), Expect(2) = 5e-20
 Identities = 10/10 (100%), Positives = 10/10 (100%)
 Frame = -3

Query: 145 LVAILNSLIS 116
           LVAILNSLIS
Sbjct: 53  LVAILNSLIS 62
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>PSBZ_LIRTU (Q5IHA9) Photosystem II reaction center Z protein|
          Length = 62

 Score = 96.3 bits (238), Expect(2) = 5e-20
 Identities = 47/52 (90%), Positives = 51/52 (98%)
 Frame = -2

Query: 302 MTIAFQLAVFALIATSSVLVISVPLVFASPDGWSNNKNVVFSGTSLWIGLVF 147
           MTIAFQLAVFALIATSS+L+ISVP+VFAS DGWS+NKNVVFSGTSLWIGLVF
Sbjct: 1   MTIAFQLAVFALIATSSILLISVPVVFASSDGWSSNKNVVFSGTSLWIGLVF 52



 Score = 20.8 bits (42), Expect(2) = 5e-20
 Identities = 10/10 (100%), Positives = 10/10 (100%)
 Frame = -3

Query: 145 LVAILNSLIS 116
           LVAILNSLIS
Sbjct: 53  LVAILNSLIS 62
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>PSBZ_TOBAC (P09974) Photosystem II reaction center Z protein|
          Length = 62

 Score = 96.3 bits (238), Expect = 6e-20
 Identities = 46/52 (88%), Positives = 51/52 (98%)
 Frame = -2

Query: 302 MTIAFQLAVFALIATSSVLVISVPLVFASPDGWSNNKNVVFSGTSLWIGLVF 147
           MT+AFQLAVFALIATS +L+ISVP+VFASPDGWS+NKNVVFSGTSLWIGLVF
Sbjct: 1   MTLAFQLAVFALIATSLILLISVPVVFASPDGWSSNKNVVFSGTSLWIGLVF 52
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>PSBZ_ATRBE (P59706) Photosystem II reaction center Z protein|
          Length = 62

 Score = 96.3 bits (238), Expect = 6e-20
 Identities = 46/52 (88%), Positives = 51/52 (98%)
 Frame = -2

Query: 302 MTIAFQLAVFALIATSSVLVISVPLVFASPDGWSNNKNVVFSGTSLWIGLVF 147
           MT+AFQLAVFALIATS +L+ISVP+VFASPDGWS+NKNVVFSGTSLWIGLVF
Sbjct: 1   MTLAFQLAVFALIATSLILLISVPVVFASPDGWSSNKNVVFSGTSLWIGLVF 52
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>PSBZ_AMBTC (Q70Y06) Photosystem II reaction center Z protein|
          Length = 62

 Score = 95.9 bits (237), Expect(2) = 7e-20
 Identities = 46/52 (88%), Positives = 51/52 (98%)
 Frame = -2

Query: 302 MTIAFQLAVFALIATSSVLVISVPLVFASPDGWSNNKNVVFSGTSLWIGLVF 147
           MTIAFQLAVFALIATSS+L+ISVP+VFAS DGWS+NKN+VFSGTSLWIGLVF
Sbjct: 1   MTIAFQLAVFALIATSSILLISVPVVFASSDGWSSNKNIVFSGTSLWIGLVF 52



 Score = 20.8 bits (42), Expect(2) = 7e-20
 Identities = 10/10 (100%), Positives = 10/10 (100%)
 Frame = -3

Query: 145 LVAILNSLIS 116
           LVAILNSLIS
Sbjct: 53  LVAILNSLIS 62
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>PSBZ_MAIZE (Q33300) Photosystem II reaction center Z protein|
          Length = 62

 Score = 94.0 bits (232), Expect(2) = 3e-19
 Identities = 48/52 (92%), Positives = 48/52 (92%)
 Frame = -2

Query: 302 MTIAFQLAVFALIATSSVLVISVPLVFASPDGWSNNKNVVFSGTSLWIGLVF 147
           M IAFQLAVFALIATSSVLVI   LVFASPDGWSNNKNVVFSGTSLWIGLVF
Sbjct: 1   MNIAFQLAVFALIATSSVLVIRGHLVFASPDGWSNNKNVVFSGTSLWIGLVF 52



 Score = 20.8 bits (42), Expect(2) = 3e-19
 Identities = 10/10 (100%), Positives = 10/10 (100%)
 Frame = -3

Query: 145 LVAILNSLIS 116
           LVAILNSLIS
Sbjct: 53  LVAILNSLIS 62
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>PSBZ_ANTFO (P59705) Photosystem II reaction center Z protein|
          Length = 62

 Score = 88.2 bits (217), Expect = 2e-17
 Identities = 43/52 (82%), Positives = 47/52 (90%)
 Frame = -2

Query: 302 MTIAFQLAVFALIATSSVLVISVPLVFASPDGWSNNKNVVFSGTSLWIGLVF 147
           MTIAFQLAVFALIATS +LVI VP+V ASPDGWS++KN VFSG SLWIGLVF
Sbjct: 1   MTIAFQLAVFALIATSFLLVIGVPVVLASPDGWSSSKNAVFSGASLWIGLVF 52
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>PSBZ_MARPO (P09973) Photosystem II reaction center Z protein|
          Length = 62

 Score = 87.8 bits (216), Expect = 2e-17
 Identities = 43/52 (82%), Positives = 47/52 (90%)
 Frame = -2

Query: 302 MTIAFQLAVFALIATSSVLVISVPLVFASPDGWSNNKNVVFSGTSLWIGLVF 147
           MTIAFQLAVFALIA S +LVI VP+V ASP+GWS+NKNVVFSG SLWIGLVF
Sbjct: 1   MTIAFQLAVFALIAISFLLVIGVPVVLASPEGWSSNKNVVFSGASLWIGLVF 52
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>PSBZ_ADICA (Q85FM4) Photosystem II reaction center Z protein|
          Length = 62

 Score = 84.3 bits (207), Expect = 2e-16
 Identities = 39/52 (75%), Positives = 45/52 (86%)
 Frame = -2

Query: 302 MTIAFQLAVFALIATSSVLVISVPLVFASPDGWSNNKNVVFSGTSLWIGLVF 147
           MT AFQ A+FALIATS +LV+ VP+ FASP GWS+NKN+VFSG SLWIGLVF
Sbjct: 1   MTTAFQFALFALIATSFLLVVGVPVAFASPGGWSDNKNIVFSGASLWIGLVF 52
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>PSBZ_PSINU (Q8WI21) Photosystem II reaction center Z protein|
          Length = 62

 Score = 83.2 bits (204), Expect = 5e-16
 Identities = 39/52 (75%), Positives = 46/52 (88%)
 Frame = -2

Query: 302 MTIAFQLAVFALIATSSVLVISVPLVFASPDGWSNNKNVVFSGTSLWIGLVF 147
           MTIAF+L+VFALI  S +LVI VP+V ASPDGWS++KN+VFSG SLWIGLVF
Sbjct: 1   MTIAFELSVFALITISFLLVIGVPVVLASPDGWSSSKNIVFSGASLWIGLVF 52
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>PSBZ_HUPLU (Q5SD09) Photosystem II reaction center Z protein|
          Length = 62

 Score = 80.5 bits (197), Expect = 3e-15
 Identities = 39/52 (75%), Positives = 44/52 (84%)
 Frame = -2

Query: 302 MTIAFQLAVFALIATSSVLVISVPLVFASPDGWSNNKNVVFSGTSLWIGLVF 147
           MTIAFQLAVFA IA   +LVI VP+V ASPDGWS+++NVVFSG S WIGLVF
Sbjct: 1   MTIAFQLAVFASIAIPFILVIGVPVVLASPDGWSSSRNVVFSGASSWIGLVF 52
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>PSBZ_CRYJA (Q5IHA3) Photosystem II reaction center Z protein|
          Length = 62

 Score = 80.1 bits (196), Expect = 4e-15
 Identities = 38/52 (73%), Positives = 45/52 (86%)
 Frame = -2

Query: 302 MTIAFQLAVFALIATSSVLVISVPLVFASPDGWSNNKNVVFSGTSLWIGLVF 147
           MTIAFQ +VFALIA S++LVI VP+  ASP+GWS+NKNV+FSG SLWIG VF
Sbjct: 1   MTIAFQSSVFALIAISTLLVIGVPVALASPNGWSSNKNVLFSGVSLWIGSVF 52
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>PSBZ_PINTH (P41642) Photosystem II reaction center Z protein|
          Length = 62

 Score = 79.0 bits (193), Expect = 9e-15
 Identities = 39/51 (76%), Positives = 43/51 (84%)
 Frame = -2

Query: 302 MTIAFQLAVFALIATSSVLVISVPLVFASPDGWSNNKNVVFSGTSLWIGLV 150
           MTIAFQ AVFALIA S +LVI VP+  ASPDGWS++KNVVFSG SLWIG V
Sbjct: 1   MTIAFQSAVFALIAISFLLVIGVPVALASPDGWSSSKNVVFSGVSLWIGSV 51
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>PSBZ_CHAGL (Q8M9W6) Photosystem II reaction center Z protein|
          Length = 62

 Score = 78.2 bits (191), Expect = 2e-14
 Identities = 36/52 (69%), Positives = 43/52 (82%)
 Frame = -2

Query: 302 MTIAFQLAVFALIATSSVLVISVPLVFASPDGWSNNKNVVFSGTSLWIGLVF 147
           M +AFQL+VFAL+A S +LV+ VP+V ASPDGWS +KN VFSG SLWI LVF
Sbjct: 1   MILAFQLSVFALVAISFLLVVGVPVVLASPDGWSTSKNAVFSGASLWIALVF 52
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>PSBZ_MESVI (Q9MUP9) Photosystem II reaction center Z protein|
          Length = 62

 Score = 72.0 bits (175), Expect = 1e-12
 Identities = 34/52 (65%), Positives = 40/52 (76%)
 Frame = -2

Query: 302 MTIAFQLAVFALIATSSVLVISVPLVFASPDGWSNNKNVVFSGTSLWIGLVF 147
           M  AFQL V ALIATS ++VI VP++FASP+GW  +KN VFSG  LWI LVF
Sbjct: 1   MLAAFQLTVLALIATSFLMVIGVPVIFASPEGWVKSKNFVFSGALLWISLVF 52
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>PSBZ_NEPOL (Q9TKX2) Photosystem II reaction center Z protein|
          Length = 62

 Score = 65.5 bits (158), Expect = 1e-10
 Identities = 29/52 (55%), Positives = 37/52 (71%)
 Frame = -2

Query: 302 MTIAFQLAVFALIATSSVLVISVPLVFASPDGWSNNKNVVFSGTSLWIGLVF 147
           MT  FQLA+FAL+A S +LV+ VP+ FA+P+GW+  K  VF G S W  LVF
Sbjct: 1   MTFIFQLALFALVALSFLLVVGVPVAFAAPEGWNVTKGYVFQGVSAWFALVF 52
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>PSBZ_CHLRE (P92276) Photosystem II reaction center Z protein|
          Length = 62

 Score = 64.7 bits (156), Expect = 2e-10
 Identities = 30/52 (57%), Positives = 39/52 (75%)
 Frame = -2

Query: 302 MTIAFQLAVFALIATSSVLVISVPLVFASPDGWSNNKNVVFSGTSLWIGLVF 147
           MT   Q+A+ ALI  S  LV+ VP+VFA+P+GW++NK  VFSG SLW+ LVF
Sbjct: 1   MTSILQVALLALIFVSFALVVGVPVVFATPNGWTDNKGAVFSGLSLWLLLVF 52
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>PSBZ_CHLVU (P56313) Photosystem II reaction center Z protein|
          Length = 62

 Score = 64.3 bits (155), Expect = 2e-10
 Identities = 28/52 (53%), Positives = 38/52 (73%)
 Frame = -2

Query: 302 MTIAFQLAVFALIATSSVLVISVPLVFASPDGWSNNKNVVFSGTSLWIGLVF 147
           M + FQLA+FA I  S +LV+ VP+V A+P+GW+ NK+ VFSG  +W  LVF
Sbjct: 1   MLLIFQLALFAFIVVSFLLVVGVPVVLATPEGWAENKSTVFSGIGIWFLLVF 52
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>PSBZ_SYNEL (Q8DHJ2) Photosystem II reaction center Z protein|
          Length = 62

 Score = 60.1 bits (144), Expect = 5e-09
 Identities = 27/51 (52%), Positives = 36/51 (70%)
 Frame = -2

Query: 302 MTIAFQLAVFALIATSSVLVISVPLVFASPDGWSNNKNVVFSGTSLWIGLV 150
           MTI FQLA+ AL+  S V+VI VP+ +ASP  W  +K ++F G+ LWI LV
Sbjct: 1   MTILFQLALAALVILSFVMVIGVPVAYASPQDWDRSKQLIFLGSGLWIALV 51
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>PSBZ_GRATL (Q6B8V1) Photosystem II reaction center Z protein|
          Length = 65

 Score = 59.7 bits (143), Expect = 6e-09
 Identities = 24/54 (44%), Positives = 38/54 (70%)
 Frame = -2

Query: 311 IRNMTIAFQLAVFALIATSSVLVISVPLVFASPDGWSNNKNVVFSGTSLWIGLV 150
           ++ MTI  QL VF L+  S++LV+ +P+ FASP  W  +KN++++G  +W GLV
Sbjct: 1   MKAMTIIVQLLVFILVIFSTLLVVGIPVTFASPGQWEKSKNLIYTGAGIWTGLV 54
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>PSBZ_PORPU (P51316) Photosystem II reaction center Z protein|
          Length = 62

 Score = 57.8 bits (138), Expect = 2e-08
 Identities = 26/55 (47%), Positives = 35/55 (63%)
 Frame = -2

Query: 302 MTIAFQLAVFALIATSSVLVISVPLVFASPDGWSNNKNVVFSGTSLWIGLVFXRS 138
           M IA QL V  LI  S++LV+ VP+V ASP  W  +K ++++G  LW GLV   S
Sbjct: 1   MIIAIQLLVLLLITLSTILVVGVPVVLASPGQWEQSKGLIYTGAGLWTGLVIVTS 55
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>PSBZ_CYAPA (P17159) Photosystem II reaction center Z protein|
          Length = 65

 Score = 55.5 bits (132), Expect = 1e-07
 Identities = 23/51 (45%), Positives = 36/51 (70%)
 Frame = -2

Query: 302 MTIAFQLAVFALIATSSVLVISVPLVFASPDGWSNNKNVVFSGTSLWIGLV 150
           M IAFQ AVFAL+  S VL+++VP+  ASP  W  ++ ++++G +LW  L+
Sbjct: 1   MLIAFQGAVFALVLLSFVLIVAVPVALASPGEWERSQRLIYAGAALWTSLI 51
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>PSBZ_EUGGR (P32095) Photosystem II reaction center Z protein|
          Length = 65

 Score = 54.3 bits (129), Expect = 3e-07
 Identities = 24/51 (47%), Positives = 33/51 (64%)
 Frame = -2

Query: 299 TIAFQLAVFALIATSSVLVISVPLVFASPDGWSNNKNVVFSGTSLWIGLVF 147
           T  FQ  V ALI  S +LV+++P++FASP GW NNK+ ++     W  LVF
Sbjct: 5   TFTFQALVLALIIFSFILVLTLPVIFASPKGWENNKSRIWLACRFWFFLVF 55
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>PSBZ_ANASP (Q8YQ44) Photosystem II reaction center Z protein|
          Length = 62

 Score = 54.3 bits (129), Expect = 3e-07
 Identities = 23/51 (45%), Positives = 35/51 (68%)
 Frame = -2

Query: 302 MTIAFQLAVFALIATSSVLVISVPLVFASPDGWSNNKNVVFSGTSLWIGLV 150
           MTI FQ A+ AL+  S VLV+ VP+ +A+P  W  +K +++ G+ +WI LV
Sbjct: 1   MTIIFQFALVALVLVSFVLVVGVPVAYATPQNWVESKKLLWLGSGVWIALV 51
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>PSBZ_SYNY3 (P73528) Photosystem II reaction center Z protein|
          Length = 62

 Score = 50.8 bits (120), Expect = 3e-06
 Identities = 21/51 (41%), Positives = 35/51 (68%)
 Frame = -2

Query: 302 MTIAFQLAVFALIATSSVLVISVPLVFASPDGWSNNKNVVFSGTSLWIGLV 150
           M+I FQ+A+ AL+  S V+V+ VP+ +ASP  W  +K +++ G+ +W  LV
Sbjct: 1   MSIVFQIALAALVLFSFVMVVGVPVAYASPQNWDRSKPLLYLGSGIWAILV 51
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>PSBZ_GUITH (O78503) Photosystem II reaction center Z protein|
          Length = 62

 Score = 48.9 bits (115), Expect = 1e-05
 Identities = 22/51 (43%), Positives = 29/51 (56%)
 Frame = -2

Query: 302 MTIAFQLAVFALIATSSVLVISVPLVFASPDGWSNNKNVVFSGTSLWIGLV 150
           M    QL V  LI  S  LV+ VP++  SP  W  +KN+V++   LW GLV
Sbjct: 1   MVTILQLLVSILILLSFALVVGVPVILVSPGEWERSKNLVYASAGLWFGLV 51
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>PSBZ_CYAME (Q85FY1) Photosystem II reaction center Z protein|
          Length = 62

 Score = 46.6 bits (109), Expect = 5e-05
 Identities = 19/51 (37%), Positives = 34/51 (66%)
 Frame = -2

Query: 302 MTIAFQLAVFALIATSSVLVISVPLVFASPDGWSNNKNVVFSGTSLWIGLV 150
           M+I  Q+ V ALI  S VL+++VP+  ++  GWS +K+ + + +  W+G+V
Sbjct: 1   MSIILQILVVALIVYSFVLIVAVPITLSTASGWSKSKSSIVTASIGWVGMV 51
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>PSBZ_SYNP6 (Q5N0X7) Photosystem II reaction center Z protein|
          Length = 62

 Score = 36.6 bits (83), Expect = 0.054
 Identities = 17/51 (33%), Positives = 28/51 (54%)
 Frame = -2

Query: 302 MTIAFQLAVFALIATSSVLVISVPLVFASPDGWSNNKNVVFSGTSLWIGLV 150
           M I FQLA+  L+  S VL++ VP+++A+      +  ++  G   W  LV
Sbjct: 1   MVILFQLALLLLVVMSFVLIVGVPVLYATNGDRVQSNRLILVGGLAWTALV 51
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>PSBZ_SKECO (O96798) Photosystem II reaction center Z protein|
          Length = 61

 Score = 36.6 bits (83), Expect = 0.054
 Identities = 15/40 (37%), Positives = 24/40 (60%)
 Frame = -2

Query: 269 LIATSSVLVISVPLVFASPDGWSNNKNVVFSGTSLWIGLV 150
           L+  S  LV++VP+  A+P  W ++K+       LW+GLV
Sbjct: 9   LVLISLALVVTVPVALATPGEWESSKDQFNKAFQLWVGLV 48
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>PSBZ_ODOSI (P49528) Photosystem II reaction center Z protein|
          Length = 61

 Score = 33.5 bits (75), Expect = 0.46
 Identities = 16/43 (37%), Positives = 23/43 (53%)
 Frame = -2

Query: 278 VFALIATSSVLVISVPLVFASPDGWSNNKNVVFSGTSLWIGLV 150
           V  L+  S  LVI+VP+  A+P  W  +K+        W+GLV
Sbjct: 6   VALLVFISLGLVITVPVALATPGEWEASKSTFTRAFQAWVGLV 48
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>BCDO1_CHICK (Q9I993) Beta,beta-carotene 15,15'-monooxygenase (EC 1.14.99.36)|
           (Beta-carotene dioxygenase 1)
          Length = 526

 Score = 33.1 bits (74), Expect = 0.60
 Identities = 21/71 (29%), Positives = 33/71 (46%)
 Frame = +3

Query: 333 KLTTYLIPHLTKIVKKYKK*EGFNHESIDSSL*LKFIT*PLFYLDMGVRGGYLVFISQAG 512
           K   + IP  + + +K KK   F H  +  S+  + +  P +Y   G+   Y+VFI Q  
Sbjct: 195 KYVLFKIP--SSVPEKEKKKSCFKHLEVVCSIPSRSLLQPSYYHSFGITENYIVFIEQPF 252

Query: 513 IADPVSVYTVY 545
             D V + T Y
Sbjct: 253 KLDIVKLATAY 263
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>PSBZ_EUGMY (Q8SL91) Photosystem II reaction center Z protein (Fragment)|
          Length = 32

 Score = 33.1 bits (74), Expect = 0.60
 Identities = 10/21 (47%), Positives = 17/21 (80%)
 Frame = -2

Query: 212 DGWSNNKNVVFSGTSLWIGLV 150
           + W NNKN++FSG+ +W+ L+
Sbjct: 1   NSWENNKNIIFSGSLIWVFLL 21
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>PSBZ_EUGGA (Q8SL93) Photosystem II reaction center Z protein (Fragment)|
          Length = 32

 Score = 32.7 bits (73), Expect = 0.78
 Identities = 12/21 (57%), Positives = 16/21 (76%)
 Frame = -2

Query: 212 DGWSNNKNVVFSGTSLWIGLV 150
           +GW++NKN V  G + WIGLV
Sbjct: 1   NGWNDNKNFVLFGAAAWIGLV 21
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>SCN8A_HUMAN (Q9UQD0) Sodium channel protein type 8 alpha subunit (Sodium|
           channel protein type VIII alpha subunit) (Voltage-gated
           sodium channel alpha subunit Nav1.6)
          Length = 1980

 Score = 31.2 bits (69), Expect = 2.3
 Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
 Frame = -2

Query: 335 LYLMVAWR-IRNMTIAFQL-AVFALIATSSVLVISVPLVFASPDGWSNNKNVVFSGTSLW 162
           LY++  +  IR + I   + +VF++I   ++L   V + F++P  WS N    F+G   +
Sbjct: 112 LYILSPFNLIRRIAIKILIHSVFSMIIMCTILTNCVFMTFSNPPDWSKNVEYTFTGIYTF 171

Query: 161 IGLV 150
             LV
Sbjct: 172 ESLV 175
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>SCN8A_MOUSE (Q9WTU3) Sodium channel protein type 8 alpha subunit (Sodium|
           channel protein type VIII alpha subunit) (Voltage-gated
           sodium channel alpha subunit Nav1.6)
          Length = 1978

 Score = 30.8 bits (68), Expect = 3.0
 Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
 Frame = -2

Query: 335 LYLMVAWR-IRNMTIAFQL-AVFALIATSSVLVISVPLVFASPDGWSNNKNVVFSGTSLW 162
           LY++  +  IR + I   + +VF++I   ++L   V + F++P  WS N    F+G   +
Sbjct: 112 LYILSPFNLIRRIAIKILIHSVFSMIIMCTILTNCVFMTFSNPPEWSKNVEYTFTGIYTF 171

Query: 161 IGLV 150
             LV
Sbjct: 172 ESLV 175
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>PSBZ_EUGAN (Q8SL95) Photosystem II reaction center Z protein (Fragment)|
          Length = 32

 Score = 30.4 bits (67), Expect = 3.9
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = -2

Query: 212 DGWSNNKNVVFSGTSLWIGLV 150
           +GW+ NKN +  G++ W GLV
Sbjct: 1   NGWNENKNYILIGSAAWAGLV 21
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>TNP7_ECOLI (P13694) Transposase for transposon Tn3926|
          Length = 990

 Score = 29.3 bits (64), Expect = 8.6
 Identities = 29/102 (28%), Positives = 47/102 (46%), Gaps = 12/102 (11%)
 Frame = -2

Query: 431  LKRRINGFMIK-----PLLLLVFFYNFG*VRDQICSQ-------LYLMVAWRIRNMTIAF 288
            L+RR++  + K      L   VFFY  G +RD+   Q       L L+ A  +   T+  
Sbjct: 873  LRRRVHAGLNKGEARNALARAVFFYRLGEIRDRSFEQQRYRASGLNLVTAAIVLWNTVYL 932

Query: 287  QLAVFALIATSSVLVISVPLVFASPDGWSNNKNVVFSGTSLW 162
            + A  AL    + L  ++ L + SP GW   +++  +G  LW
Sbjct: 933  ERATSALRGNGTALDDTL-LQYLSPLGW---EHINLTGDYLW 970


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 70,604,555
Number of Sequences: 219361
Number of extensions: 1295346
Number of successful extensions: 2856
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 2810
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2855
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4986986160
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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