ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd16d16
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK069925.1| Oryza sativa (japonica cultivar-group) cDNA clon... 389 e-105
2ref|XM_482580.1| Oryza sativa (japonica cultivar-group), mRNA 151 3e-33
3dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 145 2e-31
4dbj|AP005397.2| Oryza sativa (japonica cultivar-group) genomic D... 145 2e-31
5dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 82 3e-12
6dbj|AP005159.3| Oryza sativa (japonica cultivar-group) genomic D... 82 3e-12
7ref|NM_202094.1| Arabidopsis thaliana prenyl-dependent CAAX prot... 58 4e-05
8ref|NM_101293.3| Arabidopsis thaliana prenyl-dependent CAAX prot... 58 4e-05
9gb|AY091004.1| Arabidopsis thaliana unknown protein (At1g14270) ... 58 4e-05
10emb|BX815142.1|CNS0ACWM Arabidopsis thaliana Full-length cDNA Co... 58 4e-05
11gb|AY087512.1| Arabidopsis thaliana clone 36233 mRNA, complete s... 58 4e-05
12emb|BX813523.1|CNS0ADQW Arabidopsis thaliana Full-length cDNA Co... 50 0.009
13emb|BX817801.1|CNS0ACKF Arabidopsis thaliana Full-length cDNA Co... 50 0.009
14gb|AC151802.1| Solanum tuberosum chromosome 5 clone PGEC46 map M... 48 0.035
15gb|AC149291.1| Solanum demissum chromosome 5 clone PGEC568H16 ma... 48 0.035
16gb|AC149287.1| Solanum demissum chromosome 5 clone PGEC568D21 ma... 48 0.035
17gb|AY730337.1| Solanum tuberosum strain P6/210 clone BAC BA27c1,... 48 0.035
18gb|AY730334.1| Solanum tuberosum strain P6/210 clone BAC BA122p1... 48 0.035
19gb|AC144791.1| Solanum demissum chromosome 5 BAC PGEC668E02 geno... 48 0.035
20emb|AL116499.1|CNS01D8B Botrytis cinerea strain T4 cDNA library 44 0.55
21emb|AL114521.1|CNS01BPD Botrytis cinerea strain T4 cDNA library 44 0.55
22emb|AL111401.1|CNS019AP Botrytis cinerea strain T4 cDNA library 44 0.55
23gb|CP000238.1| Baumannia cicadellinicola str. Hc (Homalodisca co... 42 2.2
24emb|AL807247.10| Mouse DNA sequence from clone RP23-178D3 on chr... 42 2.2
25emb|AL607084.14| Mouse DNA sequence from clone RP23-272N19 on ch... 42 2.2
26gb|AC138289.8| Mus musculus chromosome 1, clone RP24-329K3, comp... 40 8.5
27ref|NM_001002571.1| Danio rerio zgc:92747 (zgc:92747), mRNA 40 8.5
28gb|AC134610.5| Mus musculus BAC clone RP23-79B24 from chromosome... 40 8.5
29gb|AC121796.3| Mus musculus BAC clone RP23-423D22 from chromosom... 40 8.5
30emb|AL121760.11|HSDJ968J1 Human DNA sequence from clone RP5-968J... 40 8.5
31gb|AC165065.2| Phakopsora pachyrhizi clone JGIAFNA-309D18, compl... 40 8.5
32emb|BX324210.12| Zebrafish DNA sequence from clone DKEY-20I20 in... 40 8.5
33gb|AC117589.13| Mus musculus chromosome 18, clone RP23-222A8, co... 40 8.5
34gb|BC076225.1| Danio rerio zgc:92747, mRNA (cDNA clone MGC:92747... 40 8.5
35gb|AC104808.4| Homo sapiens BAC clone RP11-636J1 from 4, complet... 40 8.5
36ref|NM_164418.1| Drosophila melanogaster CG31928-PA (CG31928) mR... 40 8.5
37gb|AC092188.1|AC092188 Drosophila melanogaster, chromosome 2L, r... 40 8.5
38gb|AC158800.6| Mus musculus 10 BAC RP23-435N6 (Roswell Park Canc... 40 8.5
39gb|AC154723.2| Mus musculus BAC clone RP24-372I16 from chromosom... 40 8.5
40gb|AC005035.2| Homo sapiens BAC clone RP11-353P23 from 2, comple... 40 8.5
41emb|AL929512.14| Zebrafish DNA sequence from clone CH211-1L10, c... 40 8.5
42gb|AE003586.3| Drosophila melanogaster chromosome 2L, section 5 ... 40 8.5
43gb|AC144802.3| Mus musculus BAC clone RP24-222O23 from 10, compl... 40 8.5
44gb|AC149598.2| Mus musculus BAC clone RP24-119N9 from 18, comple... 40 8.5
45gb|AC004440.1|AC004440 Drosophila melanogaster (P1 DS04892 (D66)... 40 8.5
46emb|AL731725.8| Mouse DNA sequence from clone RP23-146P19 on chr... 40 8.5 
>dbj|AK069925.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023036B16, full
            insert sequence
          Length = 2033

 Score =  389 bits (196), Expect = e-105
 Identities = 331/376 (88%)
 Strand = Plus / Minus

                                                                        
Query: 237  aaagccttcaagatgcccccaatagctccttgatatcgtacccttgcaactgaagaaagg 296
            |||||||||||||||| ||||| |||||||||||||| |||||||||| |||||||||||
Sbjct: 1873 aaagccttcaagatgctcccaaaagctccttgatatcatacccttgcagctgaagaaagg 1814

                                                                        
Query: 297  ttagcagcagtataactcccgagttccaaaatgcatgtattgtaataggagctagaagat 356
            ||| ||| | ||| ||||||||||||||||||||||||||||| ||||||| ||||||||
Sbjct: 1813 ttaacagtaatattactcccgagttccaaaatgcatgtattgtgataggagttagaagat 1754

                                                                        
Query: 357  tgcgagtttgagcatatgtaaatcctagtgcaacacctaatacaaacagttgtgggaatt 416
            |  | ||||||||||||| ||| || |  |||||||| | || |||||  ||||||||||
Sbjct: 1753 tatgggtttgagcatatgaaaaacccaacgcaacaccaagtataaacaactgtgggaatt 1694

                                                                        
Query: 417  gatcaggtgtcaaatgagcgaaggcaaatacagcagcactgagaatcacgcagactggag 476
            |  ||||||||| |||||| |||||||||| ||||||||||| ||  | ||| |||||||
Sbjct: 1693 gtccaggtgtcagatgagcaaaggcaaatagagcagcactgacaagtatgcaaactggag 1634

                                                                        
Query: 477  taggaaaccacttagtcaaggacaccattagaaatcctcggaacacagtctcctccagaa 536
            |||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||
Sbjct: 1633 taggaaaccacttagtcaaggacaccattaaaaatcctcgaaacacagtctcctccagaa 1574

                                                                        
Query: 537  ttggtgctagaactccagtaatccccaccaaataggcagtgctgagagttgatgagccaa 596
            |||||||||||||||||||||| ||||||| | | |||||||||  | |||||||||| |
Sbjct: 1573 ttggtgctagaactccagtaatgcccaccagaaaagcagtgctggcacttgatgagccga 1514

                            
Query: 597  ttagtggcagtaaaag 612
            ||| ||||| ||||||
Sbjct: 1513 ttaatggcaataaaag 1498
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>ref|XM_482580.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 966

 Score =  151 bits (76), Expect = 3e-33
 Identities = 265/328 (80%)
 Strand = Plus / Minus

                                                                       
Query: 286 ctgaagaaaggttagcagcagtataactcccgagttccaaaatgcatgtattgtaatagg 345
           ||||||||  |||||||  | ||| ||||| |||||||| |  ||||||||  |||||||
Sbjct: 930 ctgaagaactgttagcaataatattactccagagttccacatagcatgtataataatagg 871

                                                                       
Query: 346 agctagaagattgcgagtttgagcatatgtaaatcctagtgcaacacctaatacaaacag 405
           ||  |||||||||||||||||||||||||  ||||| ||| ||| ||| |  ||||| ||
Sbjct: 870 agtgagaagattgcgagtttgagcatatgagaatcccagtacaataccaagcacaaatag 811

                                                                       
Query: 406 ttgtgggaattgatcaggtgtcaaatgagcgaaggcaaatacagcagcactgagaatcac 465
            ||||| ||||   | ||||| | |||||| |||||||| || | |||| ||| || |||
Sbjct: 810 ctgtggaaattcgcctggtgtaagatgagcaaaggcaaacactgaagcagtgataagcac 751

                                                                       
Query: 466 gcagactggagtaggaaaccacttagtcaaggacaccattagaaatcctcggaacacagt 525
             | | |||||||| ||||||| | |||||||||||||||||||||||||| ||||||||
Sbjct: 750 agaaattggagtagaaaaccacatggtcaaggacaccattagaaatcctcgaaacacagt 691

                                                                       
Query: 526 ctcctccagaattggtgctagaactccagtaatccccaccaaataggcagtgctgagagt 585
            || |||||||| || || ||||| ||||| || ||||  ||| |||||||||| | | |
Sbjct: 690 ttcttccagaatcggcgcaagaaccccagtgatgcccagtaaacaggcagtgctaatatt 631

                                       
Query: 586 tgatgagccaattagtggcagtaaaagg 613
            || |||||||||||||||| |||||||
Sbjct: 630 agacgagccaattagtggcaataaaagg 603
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score =  145 bits (73), Expect = 2e-31
 Identities = 91/97 (93%)
 Strand = Plus / Minus

                                                                            
Query: 483      accacttagtcaaggacaccattagaaatcctcggaacacagtctcctccagaattggtg 542
                |||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||
Sbjct: 14628778 accacttagtcaaggacaccattaaaaatcctcgaaacacagtctcctccagaattggtg 14628719

                                                     
Query: 543      ctagaactccagtaatccccaccaaataggcagtgct 579
                |||||||||||||||| ||||||| | | ||||||||
Sbjct: 14628718 ctagaactccagtaatgcccaccagaaaagcagtgct 14628682



 Score =  105 bits (53), Expect = 2e-19
 Identities = 80/89 (89%)
 Strand = Plus / Minus

                                                                            
Query: 286      ctgaagaaaggttagcagcagtataactcccgagttccaaaatgcatgtattgtaatagg 345
                |||||||||||||| ||| | ||| ||||||||||||||||||||||||||||| |||||
Sbjct: 14629385 ctgaagaaaggttaacagtaatattactcccgagttccaaaatgcatgtattgtgatagg 14629326

                                             
Query: 346      agctagaagattgcgagtttgagcatatg 374
                || |||||||||  | |||||||||||||
Sbjct: 14629325 agttagaagattatgggtttgagcatatg 14629297



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 51/55 (92%)
 Strand = Plus / Minus

                                                                       
Query: 237      aaagccttcaagatgcccccaatagctccttgatatcgtacccttgcaactgaag 291
                |||||||||||||||| ||||| |||||||||||||| |||||||||| ||||||
Sbjct: 14629657 aaagccttcaagatgctcccaaaagctccttgatatcatacccttgcagctgaag 14629603



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 69/79 (87%)
 Strand = Plus / Minus

                                                                            
Query: 407      tgtgggaattgatcaggtgtcaaatgagcgaaggcaaatacagcagcactgagaatcacg 466
                |||||||||||  ||||||||| |||||| |||||||||| ||||||||||| ||  | |
Sbjct: 14628974 tgtgggaattgtccaggtgtcagatgagcaaaggcaaatagagcagcactgacaagtatg 14628915

                                   
Query: 467      cagactggagtaggaaacc 485
                || ||||||||||||||||
Sbjct: 14628914 caaactggagtaggaaacc 14628896
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>dbj|AP005397.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0643D11
          Length = 137525

 Score =  145 bits (73), Expect = 2e-31
 Identities = 91/97 (93%)
 Strand = Plus / Minus

                                                                         
Query: 483   accacttagtcaaggacaccattagaaatcctcggaacacagtctcctccagaattggtg 542
             |||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||
Sbjct: 50445 accacttagtcaaggacaccattaaaaatcctcgaaacacagtctcctccagaattggtg 50386

                                                  
Query: 543   ctagaactccagtaatccccaccaaataggcagtgct 579
             |||||||||||||||| ||||||| | | ||||||||
Sbjct: 50385 ctagaactccagtaatgcccaccagaaaagcagtgct 50349



 Score =  105 bits (53), Expect = 2e-19
 Identities = 80/89 (89%)
 Strand = Plus / Minus

                                                                         
Query: 286   ctgaagaaaggttagcagcagtataactcccgagttccaaaatgcatgtattgtaatagg 345
             |||||||||||||| ||| | ||| ||||||||||||||||||||||||||||| |||||
Sbjct: 51052 ctgaagaaaggttaacagtaatattactcccgagttccaaaatgcatgtattgtgatagg 50993

                                          
Query: 346   agctagaagattgcgagtttgagcatatg 374
             || |||||||||  | |||||||||||||
Sbjct: 50992 agttagaagattatgggtttgagcatatg 50964



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 51/55 (92%)
 Strand = Plus / Minus

                                                                    
Query: 237   aaagccttcaagatgcccccaatagctccttgatatcgtacccttgcaactgaag 291
             |||||||||||||||| ||||| |||||||||||||| |||||||||| ||||||
Sbjct: 51324 aaagccttcaagatgctcccaaaagctccttgatatcatacccttgcagctgaag 51270



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 69/79 (87%)
 Strand = Plus / Minus

                                                                         
Query: 407   tgtgggaattgatcaggtgtcaaatgagcgaaggcaaatacagcagcactgagaatcacg 466
             |||||||||||  ||||||||| |||||| |||||||||| ||||||||||| ||  | |
Sbjct: 50641 tgtgggaattgtccaggtgtcagatgagcaaaggcaaatagagcagcactgacaagtatg 50582

                                
Query: 467   cagactggagtaggaaacc 485
             || ||||||||||||||||
Sbjct: 50581 caaactggagtaggaaacc 50563
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 77/89 (86%)
 Strand = Plus / Minus

                                                                            
Query: 491      gtcaaggacaccattagaaatcctcggaacacagtctcctccagaattggtgctagaact 550
                |||||||||||||||||||||||||| |||||||| || |||||||| || || ||||| 
Sbjct: 21203334 gtcaaggacaccattagaaatcctcgaaacacagtttcttccagaatcggcgcaagaacc 21203275

                                             
Query: 551      ccagtaatccccaccaaataggcagtgct 579
                ||||| || ||||  ||| ||||||||||
Sbjct: 21203274 ccagtgatgcccagtaaacaggcagtgct 21203246



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 75/89 (84%)
 Strand = Plus / Minus

                                                                            
Query: 286      ctgaagaaaggttagcagcagtataactcccgagttccaaaatgcatgtattgtaatagg 345
                ||||||||  |||||||  | ||| ||||| |||||||| |  ||||||||  |||||||
Sbjct: 21203868 ctgaagaactgttagcaataatattactccagagttccacatagcatgtataataatagg 21203809

                                             
Query: 346      agctagaagattgcgagtttgagcatatg 374
                ||  |||||||||||||||||||||||||
Sbjct: 21203808 agtgagaagattgcgagtttgagcatatg 21203780



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                                 
Query: 241      ccttcaagatgcccccaatagctccttgatatcgtacccttgcaactga 289
                |||||||||||||  ||| ||||||||||||| ||| || |||||||||
Sbjct: 21204232 ccttcaagatgccaacaacagctccttgatattgtatccctgcaactga 21204184



 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 590      gagccaattagtggcagtaaaagg 613
                |||||||||||||||| |||||||
Sbjct: 21203123 gagccaattagtggcaataaaagg 21203100
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>dbj|AP005159.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0016C11
          Length = 170723

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 77/89 (86%)
 Strand = Plus / Minus

                                                                         
Query: 491   gtcaaggacaccattagaaatcctcggaacacagtctcctccagaattggtgctagaact 550
             |||||||||||||||||||||||||| |||||||| || |||||||| || || ||||| 
Sbjct: 29611 gtcaaggacaccattagaaatcctcgaaacacagtttcttccagaatcggcgcaagaacc 29552

                                          
Query: 551   ccagtaatccccaccaaataggcagtgct 579
             ||||| || ||||  ||| ||||||||||
Sbjct: 29551 ccagtgatgcccagtaaacaggcagtgct 29523



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 75/89 (84%)
 Strand = Plus / Minus

                                                                         
Query: 286   ctgaagaaaggttagcagcagtataactcccgagttccaaaatgcatgtattgtaatagg 345
             ||||||||  |||||||  | ||| ||||| |||||||| |  ||||||||  |||||||
Sbjct: 30145 ctgaagaactgttagcaataatattactccagagttccacatagcatgtataataatagg 30086

                                          
Query: 346   agctagaagattgcgagtttgagcatatg 374
             ||  |||||||||||||||||||||||||
Sbjct: 30085 agtgagaagattgcgagtttgagcatatg 30057



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                              
Query: 241   ccttcaagatgcccccaatagctccttgatatcgtacccttgcaactga 289
             |||||||||||||  ||| ||||||||||||| ||| || |||||||||
Sbjct: 30509 ccttcaagatgccaacaacagctccttgatattgtatccctgcaactga 30461



 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 590   gagccaattagtggcagtaaaagg 613
             |||||||||||||||| |||||||
Sbjct: 29400 gagccaattagtggcaataaaagg 29377
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>ref|NM_202094.1| Arabidopsis thaliana prenyl-dependent CAAX protease AT1G14270
            transcript variant AT1G14270.2 mRNA, complete cds
          Length = 1518

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 59/69 (85%)
 Strand = Plus / Minus

                                                                        
Query: 256  caatagctccttgatatcgtacccttgcaactgaagaaaggttagcagcagtataactcc 315
            |||||||||||| || || |||||||| | ||||||||| || || ||||  ||||||||
Sbjct: 1282 caatagctccttaatgtcatacccttggatctgaagaaaagtgagtagcaaaataactcc 1223

                     
Query: 316  cgagttcca 324
            |||||||||
Sbjct: 1222 cgagttcca 1214
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>ref|NM_101293.3| Arabidopsis thaliana prenyl-dependent CAAX protease AT1G14270
            transcript variant AT1G14270.1 mRNA, complete cds
          Length = 1325

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 59/69 (85%)
 Strand = Plus / Minus

                                                                        
Query: 256  caatagctccttgatatcgtacccttgcaactgaagaaaggttagcagcagtataactcc 315
            |||||||||||| || || |||||||| | ||||||||| || || ||||  ||||||||
Sbjct: 1089 caatagctccttaatgtcatacccttggatctgaagaaaagtgagtagcaaaataactcc 1030

                     
Query: 316  cgagttcca 324
            |||||||||
Sbjct: 1029 cgagttcca 1021
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>gb|AY091004.1| Arabidopsis thaliana unknown protein (At1g14270) mRNA, complete cds
          Length = 1290

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 59/69 (85%)
 Strand = Plus / Minus

                                                                        
Query: 256  caatagctccttgatatcgtacccttgcaactgaagaaaggttagcagcagtataactcc 315
            |||||||||||| || || |||||||| | ||||||||| || || ||||  ||||||||
Sbjct: 1037 caatagctccttaatgtcatacccttggatctgaagaaaagtgagtagcaaaataactcc 978

                     
Query: 316  cgagttcca 324
            |||||||||
Sbjct: 977  cgagttcca 969
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>emb|BX815142.1|CNS0ACWM Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS37ZG03 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1478

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 59/69 (85%)
 Strand = Plus / Minus

                                                                        
Query: 256  caatagctccttgatatcgtacccttgcaactgaagaaaggttagcagcagtataactcc 315
            |||||||||||| || || |||||||| | ||||||||| || || ||||  ||||||||
Sbjct: 1282 caatagctccttaatgtcatacccttggatctgaagaaaagtgagtagcaaaataactcc 1223

                     
Query: 316  cgagttcca 324
            |||||||||
Sbjct: 1222 cgagttcca 1214
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>gb|AY087512.1| Arabidopsis thaliana clone 36233 mRNA, complete sequence
          Length = 1169

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 59/69 (85%)
 Strand = Plus / Minus

                                                                        
Query: 256  caatagctccttgatatcgtacccttgcaactgaagaaaggttagcagcagtataactcc 315
            |||||||||||| || || |||||||| | ||||||||| || || ||||  ||||||||
Sbjct: 1033 caatagctccttaatgtcatacccttggatctgaagaaaagtgagtagcaaaataactcc 974

                     
Query: 316  cgagttcca 324
            |||||||||
Sbjct: 973  cgagttcca 965
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>emb|BX813523.1|CNS0ADQW Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB21ZH05 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1521

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 59/69 (85%), Gaps = 1/69 (1%)
 Strand = Plus / Minus

                                                                        
Query: 256  caatagctccttgatatcgtacccttgcaactgaagaaaggttagcagcagtataactcc 315
            |||||||||||| || || |||||||| | ||||||||| || || ||||  ||||||||
Sbjct: 1431 caatagctccttaatgtcatacccttggatctgaagaaaagtgagtagca-aataactcc 1373

                     
Query: 316  cgagttcca 324
            |||||||||
Sbjct: 1372 cgagttcca 1364
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>emb|BX817801.1|CNS0ACKF Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTSIL42ZD07 of Silique of strain col-0 of Arabidopsis
            thaliana (thale cress)
          Length = 1096

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 55/65 (84%)
 Strand = Plus / Minus

                                                                        
Query: 256  caatagctccttgatatcgtacccttgcaactgaagaaaggttagcagcagtataactcc 315
            |||||||||||| || || |||||||| | ||||||||| || || ||||  ||||||||
Sbjct: 1023 caatagctccttaatgtcatacccttggatctgaagaaaagtgagtagcaaaataactcc 964

                 
Query: 316  cgagt 320
            |||||
Sbjct: 963  cgagt 959
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>gb|AC151802.1| Solanum tuberosum chromosome 5 clone PGEC46 map MAP_LOC, complete
             sequence
          Length = 43509

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 63/76 (82%)
 Strand = Plus / Minus

                                                                         
Query: 483   accacttagtcaaggacaccattagaaatcctcggaacacagtctcctccagaattggtg 542
             ||||||||||||  || ||||| | ||||||||  ||||| |||||||| |||||||| |
Sbjct: 13951 accacttagtcagagagaccataaaaaatcctctaaacacggtctcctcaagaattggag 13892

                             
Query: 543   ctagaactccagtaat 558
             | || || ||||||||
Sbjct: 13891 caagtacaccagtaat 13876
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>gb|AC149291.1| Solanum demissum chromosome 5 clone PGEC568H16 map MAP_LOC, complete
             sequence
          Length = 146091

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 63/76 (82%)
 Strand = Plus / Plus

                                                                         
Query: 483   accacttagtcaaggacaccattagaaatcctcggaacacagtctcctccagaattggtg 542
             ||||||||||||  || ||||| | ||||||||  ||||| |||||||| |||||||| |
Sbjct: 84353 accacttagtcagagagaccataaaaaatcctctaaacacggtctcctcaagaattggag 84412

                             
Query: 543   ctagaactccagtaat 558
             | || || ||||||||
Sbjct: 84413 caagtacaccagtaat 84428
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>gb|AC149287.1| Solanum demissum chromosome 5 clone PGEC568D21 map MAP_LOC, complete
             sequence
          Length = 119525

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 63/76 (82%)
 Strand = Plus / Minus

                                                                         
Query: 483   accacttagtcaaggacaccattagaaatcctcggaacacagtctcctccagaattggtg 542
             ||||||||||||  || ||||| | ||||||||  ||||| |||||||| |||||||| |
Sbjct: 13591 accacttagtcagagagaccataaaaaatcctctaaacacggtctcctcaagaattggag 13532

                             
Query: 543   ctagaactccagtaat 558
             | || || ||||||||
Sbjct: 13531 caagtacaccagtaat 13516
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>gb|AY730337.1| Solanum tuberosum strain P6/210 clone BAC BA27c1, complete sequence
          Length = 91283

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 63/76 (82%)
 Strand = Plus / Plus

                                                                         
Query: 483   accacttagtcaaggacaccattagaaatcctcggaacacagtctcctccagaattggtg 542
             ||||||||||||  || ||||| | ||||||||  ||||| |||||||| |||||||| |
Sbjct: 89471 accacttagtcagagagaccataaaaaatcctctaaacacggtctcctcaagaattggag 89530

                             
Query: 543   ctagaactccagtaat 558
             | || || ||||||||
Sbjct: 89531 caagtacaccagtaat 89546
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>gb|AY730334.1| Solanum tuberosum strain P6/210 clone BAC BA122p13, complete sequence
          Length = 91226

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 63/76 (82%)
 Strand = Plus / Minus

                                                                         
Query: 483   accacttagtcaaggacaccattagaaatcctcggaacacagtctcctccagaattggtg 542
             ||||||||||||  || ||||| | ||||||||  ||||| |||||||| |||||||| |
Sbjct: 48113 accacttagtcagagagaccataaaaaatcctctaaacacggtctcctcaagaattggag 48054

                             
Query: 543   ctagaactccagtaat 558
             | || || ||||||||
Sbjct: 48053 caagtacaccagtaat 48038
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>gb|AC144791.1| Solanum demissum chromosome 5 BAC PGEC668E02 genomic sequence, complete
             sequence
          Length = 142575

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 63/76 (82%)
 Strand = Plus / Plus

                                                                         
Query: 483   accacttagtcaaggacaccattagaaatcctcggaacacagtctcctccagaattggtg 542
             ||||||||||||  || ||||| | ||||||||  ||||| |||||||| |||||||| |
Sbjct: 32598 accacttagtcagagagaccataaaaaatcctctaaacacggtctcctcaagaattggag 32657

                             
Query: 543   ctagaactccagtaat 558
             | || || ||||||||
Sbjct: 32658 caagtacaccagtaat 32673
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>emb|AL116499.1|CNS01D8B Botrytis cinerea strain T4 cDNA library
          Length = 650

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 171 cttcttccaggtctttctgcgg 192
           ||||||||||||||||||||||
Sbjct: 595 cttcttccaggtctttctgcgg 574
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>emb|AL114521.1|CNS01BPD Botrytis cinerea strain T4 cDNA library
          Length = 660

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 171 cttcttccaggtctttctgcgg 192
           ||||||||||||||||||||||
Sbjct: 590 cttcttccaggtctttctgcgg 569
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>emb|AL111401.1|CNS019AP Botrytis cinerea strain T4 cDNA library
          Length = 720

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 171 cttcttccaggtctttctgcgg 192
           ||||||||||||||||||||||
Sbjct: 590 cttcttccaggtctttctgcgg 569
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>gb|CP000238.1| Baumannia cicadellinicola str. Hc (Homalodisca coagulata), complete
              genome
          Length = 686194

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 380    cctagtgcaacacctaataca 400
              |||||||||||||||||||||
Sbjct: 296494 cctagtgcaacacctaataca 296514
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>emb|AL807247.10| Mouse DNA sequence from clone RP23-178D3 on chromosome 4, complete
            sequence
          Length = 184686

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 382  tagtgcaacacctaatacaaa 402
            |||||||||||||||||||||
Sbjct: 3419 tagtgcaacacctaatacaaa 3399
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>emb|AL607084.14| Mouse DNA sequence from clone RP23-272N19 on chromosome 4, complete
              sequence
          Length = 113877

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 60     atgaaaggaaccatacacaat 80
              |||||||||||||||||||||
Sbjct: 110344 atgaaaggaaccatacacaat 110324
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>gb|AC138289.8| Mus musculus chromosome 1, clone RP24-329K3, complete sequence
          Length = 168668

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 472    tggagtaggaaaccacttagtcaa 495
              ||||| ||||||||||||||||||
Sbjct: 156267 tggagaaggaaaccacttagtcaa 156244
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>ref|NM_001002571.1| Danio rerio zgc:92747 (zgc:92747), mRNA
          Length = 885

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 440 gcaaatacagcagcactgag 459
           ||||||||||||||||||||
Sbjct: 13  gcaaatacagcagcactgag 32
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>gb|AC134610.5| Mus musculus BAC clone RP23-79B24 from chromosome 13, complete sequence
          Length = 235557

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 13    tctatttgtatgattgaaca 32
             ||||||||||||||||||||
Sbjct: 46689 tctatttgtatgattgaaca 46670
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>gb|AC121796.3| Mus musculus BAC clone RP23-423D22 from chromosome 18, complete
             sequence
          Length = 158469

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 339   taataggagctagaagattg 358
             ||||||||||||||||||||
Sbjct: 14613 taataggagctagaagattg 14632
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>emb|AL121760.11|HSDJ968J1 Human DNA sequence from clone RP5-968J1 on chromosome 20 Contains a
             novel gene, ESTs, STSs, GSSs and a CpG island, complete
             sequence
          Length = 91937

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 22    atgattgaacattttccacc 41
             ||||||||||||||||||||
Sbjct: 17036 atgattgaacattttccacc 17017
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>gb|AC165065.2| Phakopsora pachyrhizi clone JGIAFNA-309D18, complete sequence
          Length = 36367

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 215  aagctgaaatcagatcggtt 234
            ||||||||||||||||||||
Sbjct: 6677 aagctgaaatcagatcggtt 6696
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>emb|BX324210.12| Zebrafish DNA sequence from clone DKEY-20I20 in linkage group 22,
            complete sequence
          Length = 230738

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 440  gcaaatacagcagcactgag 459
            ||||||||||||||||||||
Sbjct: 2200 gcaaatacagcagcactgag 2219
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>gb|AC117589.13| Mus musculus chromosome 18, clone RP23-222A8, complete sequence
          Length = 211309

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 339   taataggagctagaagattg 358
             ||||||||||||||||||||
Sbjct: 43405 taataggagctagaagattg 43386
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>gb|BC076225.1| Danio rerio zgc:92747, mRNA (cDNA clone MGC:92747 IMAGE:7083385),
           complete cds
          Length = 885

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 440 gcaaatacagcagcactgag 459
           ||||||||||||||||||||
Sbjct: 13  gcaaatacagcagcactgag 32
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>gb|AC104808.4| Homo sapiens BAC clone RP11-636J1 from 4, complete sequence
          Length = 162461

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 379   tcctagtgcaacacctaatacaaacagt 406
             |||||||||| ||||||||||| |||||
Sbjct: 10261 tcctagtgcagcacctaatacatacagt 10234
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>ref|NM_164418.1| Drosophila melanogaster CG31928-PA (CG31928) mRNA, complete cds
          Length = 1257

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 405 gttgtgggaattgatcaggt 424
           ||||||||||||||||||||
Sbjct: 267 gttgtgggaattgatcaggt 248
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>gb|AC092188.1|AC092188 Drosophila melanogaster, chromosome 2L, region 22B-22C, BAC clone
              BACR28O09, complete sequence
          Length = 177326

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 405    gttgtgggaattgatcaggt 424
              ||||||||||||||||||||
Sbjct: 152873 gttgtgggaattgatcaggt 152892
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>gb|AC158800.6| Mus musculus 10 BAC RP23-435N6 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 190805

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 233    ttataaagccttcaagatgc 252
              ||||||||||||||||||||
Sbjct: 136359 ttataaagccttcaagatgc 136340
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>gb|AC154723.2| Mus musculus BAC clone RP24-372I16 from chromosome 13, complete
             sequence
          Length = 191694

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 13    tctatttgtatgattgaaca 32
             ||||||||||||||||||||
Sbjct: 70263 tctatttgtatgattgaaca 70282
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>gb|AC005035.2| Homo sapiens BAC clone RP11-353P23 from 2, complete sequence
          Length = 193708

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 184    tttctgcggaagttactcaaggat 207
              ||||| ||||||||||||||||||
Sbjct: 101694 tttctacggaagttactcaaggat 101671
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>emb|AL929512.14| Zebrafish DNA sequence from clone CH211-1L10, complete sequence
          Length = 197232

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 567   aataggcagtgctgagagttgatg 590
             ||||||||||||| ||||||||||
Sbjct: 14025 aataggcagtgcttagagttgatg 14048
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>gb|AE003586.3| Drosophila melanogaster chromosome 2L, section 5 of 83 of the complete
              sequence
          Length = 306696

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 405    gttgtgggaattgatcaggt 424
              ||||||||||||||||||||
Sbjct: 257848 gttgtgggaattgatcaggt 257829
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>gb|AC144802.3| Mus musculus BAC clone RP24-222O23 from 10, complete sequence
          Length = 154807

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 233   ttataaagccttcaagatgc 252
             ||||||||||||||||||||
Sbjct: 12165 ttataaagccttcaagatgc 12146
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>gb|AC149598.2| Mus musculus BAC clone RP24-119N9 from 18, complete sequence
          Length = 161955

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 339   taataggagctagaagattg 358
             ||||||||||||||||||||
Sbjct: 82290 taataggagctagaagattg 82309
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>gb|AC004440.1|AC004440 Drosophila melanogaster (P1 DS04892 (D66)) DNA sequence, complete
             sequence
          Length = 62400

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 405   gttgtgggaattgatcaggt 424
             ||||||||||||||||||||
Sbjct: 16148 gttgtgggaattgatcaggt 16167
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>emb|AL731725.8| Mouse DNA sequence from clone RP23-146P19 on chromosome X, complete
             sequence
          Length = 213743

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 491   gtcaaggacaccattagaaa 510
             ||||||||||||||||||||
Sbjct: 61726 gtcaaggacaccattagaaa 61745


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,111,365
Number of Sequences: 3902068
Number of extensions: 5111365
Number of successful extensions: 91219
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 91077
Number of HSP's gapped (non-prelim): 141
length of query: 627
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 604
effective length of database: 17,143,297,704
effective search space: 10354551813216
effective search space used: 10354551813216
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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