ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd16d15
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AMPM_CHLMU (Q9PL68) Methionine aminopeptidase (EC 3.4.11.18) (MA... 31 3.6

>AMPM_CHLMU (Q9PL68) Methionine aminopeptidase (EC 3.4.11.18) (MAP) (Peptidase|
           M)
          Length = 291

 Score = 30.8 bits (68), Expect = 3.6
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = +3

Query: 474 RFHLNAYCIKHRSICKIPSIPPHQSYIVQSVHNL 575
           RFH N Y   HR+ CKIP + P  ++ ++ + N+
Sbjct: 214 RFHENPYVAHHRNSCKIP-LAPGMTFTIEPMINV 246


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 87,446,013
Number of Sequences: 219361
Number of extensions: 1762268
Number of successful extensions: 3273
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 3213
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3273
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5995743495
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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