ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd16d14
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC138197.3| Oryza sativa (japonica cultivar-group) chromosome... 242 1e-60
2dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 242 1e-60
3dbj|AK100924.1| Oryza sativa (japonica cultivar-group) cDNA clon... 242 1e-60
4dbj|AK100912.1| Oryza sativa (japonica cultivar-group) cDNA clon... 242 1e-60
5gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 242 1e-60
6gb|AC121965.3| Mus musculus BAC clone RP24-262G23 from chromosom... 46 0.13
7gb|AC122033.5| Mus musculus BAC clone RP24-403A7 from chromosome... 46 0.13
8gb|AC126254.3| Mus musculus BAC clone RP24-132D17 from chromosom... 46 0.13
9gb|AC154392.18| Mus musculus chromosome 1, clone RP23-413K6, com... 44 0.52
10ref|XM_638279.1| Dictyostelium discoideum hypothetical protein (... 42 2.0
11gb|CP000027.1| Dehalococcoides ethenogenes 195, complete genome 40 8.1
12gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete ge... 40 8.1
13gb|AC132624.3| Mus musculus BAC clone RP23-77B21 from chromosome... 40 8.1
14emb|BX323463.24| Zebrafish DNA sequence from clone DKEY-169J7 in... 40 8.1
15emb|BX897700.1| Bartonella quintana str. Toulouse, complete genome 40 8.1
16emb|AJ131022.1|DME131022 Drosophila melanogaster D-Sp1 gene for ... 40 8.1
17gb|AC023702.4| Drosophila melanogaster X BAC RP98-24L2 (Roswell ... 40 8.1
18ref|NM_167200.1| Drosophila melanogaster Sp1 CG1343-RB, transcri... 40 8.1
19ref|NM_132351.1| Drosophila melanogaster Sp1 CG1343-RA, transcri... 40 8.1
20dbj|AK155607.1| Mus musculus B6-derived CD11 +ve dendritic cells... 40 8.1
21gb|AC112697.4| Homo sapiens BAC clone RP11-562O10 from 2, comple... 40 8.1
22gb|AC154674.2| Mus musculus BAC clone RP24-299A15 from chromosom... 40 8.1
23gb|AC130390.4| Drosophila melanogaster X BAC RP98-21O19 (Roswell... 40 8.1
24gb|U43375.1| Caenorhabditis elegans cosmid K09C4, complete sequence 40 8.1
25emb|CT573015.11| Mouse DNA sequence from clone RP23-468I6 on chr... 40 8.1
26gb|AE003448.4| Drosophila melanogaster chromosome X, section 32 ... 40 8.1
27gb|L42023.1| Haemophilus influenzae Rd KW20, complete genome 40 8.1 
>gb|AC138197.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0055D24
              map C535, complete sequence
          Length = 174759

 Score =  242 bits (122), Expect = 1e-60
 Identities = 317/382 (82%)
 Strand = Plus / Plus

                                                                          
Query: 177    aaactttccgagctcccgatcactgcaatcggaataaatcctcaattgaggggccaatgg 236
              |||||||| ||| | | ||||| ||||||||||||||||||||||| |||||||||||| 
Sbjct: 147434 aaactttctgagtttctgatcattgcaatcggaataaatcctcaatggaggggccaatgc 147493

                                                                          
Query: 237    acattgcttcatccaccacttgcttcacactgggcctagcaatgctaaatagtgccagac 296
              ||||  |||||||  ||  ||| |||||| ||||||||||||||||||||  ||||||||
Sbjct: 147494 acatgacttcatcagccctttgtttcacattgggcctagcaatgctaaatgatgccagac 147553

                                                                          
Query: 297    cattagttgtaaccttgccacagccatgtatgtgaaggacctcaaggcgcatgcatccat 356
              ||||| | || | ||||||||| ||||| || || || || | |||||  |  || ||||
Sbjct: 147554 cattattagtgatcttgccacatccatggatatgcagaacttgaaggcatacacagccat 147613

                                                                          
Query: 357    ccttgagagcctgcaatccttggtcgcatatgtttcggcaacggttcacatgaagaattc 416
              ||   ||||||||||| |||||||| || ||||||||||||||||| ||||| |  ||||
Sbjct: 147614 cccctagagcctgcaaaccttggtcacaaatgtttcggcaacggttaacatgcaagattc 147673

                                                                          
Query: 417    ttagcttgttgcagttcgatccaatcgccgaccaaccaggtaagcggacgccatgacaga 476
              | ||||||||||||  | |||||||||| ||||| ||||| ||||| || ||||| ||||
Sbjct: 147674 tcagcttgttgcagagcaatccaatcgcagaccatccaggcaagcgaactccatggcaga 147733

                                                                          
Query: 477    cagcaaggttccactcctcgatcaacgggcacccactagctattgccaccacagaatcat 536
              |||| ||| |||| ||||| ||||| || ||||| ||||||||||||  |||||||||||
Sbjct: 147734 cagcgaggctccattcctcaatcaatggacacccgctagctattgccgtcacagaatcat 147793

                                    
Query: 537    cagtaagatagcggcacatcct 558
              | ||||| || |||||||||||
Sbjct: 147794 cggtaaggtaacggcacatcct 147815
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score =  242 bits (122), Expect = 1e-60
 Identities = 317/382 (82%)
 Strand = Plus / Minus

                                                                           
Query: 177     aaactttccgagctcccgatcactgcaatcggaataaatcctcaattgaggggccaatgg 236
               |||||||| ||| | | ||||| ||||||||||||||||||||||| |||||||||||| 
Sbjct: 8870793 aaactttctgagtttctgatcattgcaatcggaataaatcctcaatggaggggccaatgc 8870734

                                                                           
Query: 237     acattgcttcatccaccacttgcttcacactgggcctagcaatgctaaatagtgccagac 296
               ||||  |||||||  ||  ||| |||||| ||||||||||||||||||||  ||||||||
Sbjct: 8870733 acatgacttcatcagccctttgtttcacattgggcctagcaatgctaaatgatgccagac 8870674

                                                                           
Query: 297     cattagttgtaaccttgccacagccatgtatgtgaaggacctcaaggcgcatgcatccat 356
               ||||| | || | ||||||||| ||||| || || || || | |||||  |  || ||||
Sbjct: 8870673 cattattagtgatcttgccacatccatggatatgcagaacttgaaggcatacacagccat 8870614

                                                                           
Query: 357     ccttgagagcctgcaatccttggtcgcatatgtttcggcaacggttcacatgaagaattc 416
               ||   ||||||||||| |||||||| || ||||||||||||||||| ||||| |  ||||
Sbjct: 8870613 cccctagagcctgcaaaccttggtcacaaatgtttcggcaacggttaacatgcaagattc 8870554

                                                                           
Query: 417     ttagcttgttgcagttcgatccaatcgccgaccaaccaggtaagcggacgccatgacaga 476
               | ||||||||||||  | |||||||||| ||||| ||||| ||||| || ||||| ||||
Sbjct: 8870553 tcagcttgttgcagagcaatccaatcgcagaccatccaggcaagcgaactccatggcaga 8870494

                                                                           
Query: 477     cagcaaggttccactcctcgatcaacgggcacccactagctattgccaccacagaatcat 536
               |||| ||| |||| ||||| ||||| || ||||| ||||||||||||  |||||||||||
Sbjct: 8870493 cagcgaggctccattcctcaatcaatggacacccgctagctattgccgtcacagaatcat 8870434

                                     
Query: 537     cagtaagatagcggcacatcct 558
               | ||||| || |||||||||||
Sbjct: 8870433 cggtaaggtaacggcacatcct 8870412
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>dbj|AK100924.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023134E03, full
            insert sequence
          Length = 2249

 Score =  242 bits (122), Expect = 1e-60
 Identities = 317/382 (82%)
 Strand = Plus / Minus

                                                                        
Query: 177  aaactttccgagctcccgatcactgcaatcggaataaatcctcaattgaggggccaatgg 236
            |||||||| ||| | | ||||| ||||||||||||||||||||||| |||||||||||| 
Sbjct: 1739 aaactttctgagtttctgatcattgcaatcggaataaatcctcaatggaggggccaatgc 1680

                                                                        
Query: 237  acattgcttcatccaccacttgcttcacactgggcctagcaatgctaaatagtgccagac 296
            ||||  |||||||  ||  ||| |||||| ||||||||||||||||||||  ||||||||
Sbjct: 1679 acatgacttcatcagccctttgtttcacattgggcctagcaatgctaaatgatgccagac 1620

                                                                        
Query: 297  cattagttgtaaccttgccacagccatgtatgtgaaggacctcaaggcgcatgcatccat 356
            ||||| | || | ||||||||| ||||| || || || || | |||||  |  || ||||
Sbjct: 1619 cattattagtgatcttgccacatccatggatatgcagaacttgaaggcatacacagccat 1560

                                                                        
Query: 357  ccttgagagcctgcaatccttggtcgcatatgtttcggcaacggttcacatgaagaattc 416
            ||   ||||||||||| |||||||| || ||||||||||||||||| ||||| |  ||||
Sbjct: 1559 cccctagagcctgcaaaccttggtcacaaatgtttcggcaacggttaacatgcaagattc 1500

                                                                        
Query: 417  ttagcttgttgcagttcgatccaatcgccgaccaaccaggtaagcggacgccatgacaga 476
            | ||||||||||||  | |||||||||| ||||| ||||| ||||| || ||||| ||||
Sbjct: 1499 tcagcttgttgcagagcaatccaatcgcagaccatccaggcaagcgaactccatggcaga 1440

                                                                        
Query: 477  cagcaaggttccactcctcgatcaacgggcacccactagctattgccaccacagaatcat 536
            |||| ||| |||| ||||| ||||| || ||||| ||||||||||||  |||||||||||
Sbjct: 1439 cagcgaggctccattcctcaatcaatggacacccgctagctattgccgtcacagaatcat 1380

                                  
Query: 537  cagtaagatagcggcacatcct 558
            | ||||| || |||||||||||
Sbjct: 1379 cggtaaggtaacggcacatcct 1358
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>dbj|AK100912.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023132O20, full
            insert sequence
          Length = 2249

 Score =  242 bits (122), Expect = 1e-60
 Identities = 317/382 (82%)
 Strand = Plus / Minus

                                                                        
Query: 177  aaactttccgagctcccgatcactgcaatcggaataaatcctcaattgaggggccaatgg 236
            |||||||| ||| | | ||||| ||||||||||||||||||||||| |||||||||||| 
Sbjct: 1739 aaactttctgagtttctgatcattgcaatcggaataaatcctcaatggaggggccaatgc 1680

                                                                        
Query: 237  acattgcttcatccaccacttgcttcacactgggcctagcaatgctaaatagtgccagac 296
            ||||  |||||||  ||  ||| |||||| ||||||||||||||||||||  ||||||||
Sbjct: 1679 acatgacttcatcagccctttgtttcacattgggcctagcaatgctaaatgatgccagac 1620

                                                                        
Query: 297  cattagttgtaaccttgccacagccatgtatgtgaaggacctcaaggcgcatgcatccat 356
            ||||| | || | ||||||||| ||||| || || || || | |||||  |  || ||||
Sbjct: 1619 cattattagtgatcttgccacatccatggatatgcagaacttgaaggcatacacagccat 1560

                                                                        
Query: 357  ccttgagagcctgcaatccttggtcgcatatgtttcggcaacggttcacatgaagaattc 416
            ||   ||||||||||| |||||||| || ||||||||||||||||| ||||| |  ||||
Sbjct: 1559 cccctagagcctgcaaaccttggtcacaaatgtttcggcaacggttaacatgcaagattc 1500

                                                                        
Query: 417  ttagcttgttgcagttcgatccaatcgccgaccaaccaggtaagcggacgccatgacaga 476
            | ||||||||||||  | |||||||||| ||||| ||||| ||||| || ||||| ||||
Sbjct: 1499 tcagcttgttgcagagcaatccaatcgcagaccatccaggcaagcgaactccatggcaga 1440

                                                                        
Query: 477  cagcaaggttccactcctcgatcaacgggcacccactagctattgccaccacagaatcat 536
            |||| ||| |||| ||||| ||||| || ||||| ||||||||||||  |||||||||||
Sbjct: 1439 cagcgaggctccattcctcaatcaatggacacccgctagctattgccgtcacagaatcat 1380

                                  
Query: 537  cagtaagatagcggcacatcct 558
            | ||||| || |||||||||||
Sbjct: 1379 cggtaaggtaacggcacatcct 1358
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  242 bits (122), Expect = 1e-60
 Identities = 317/382 (82%)
 Strand = Plus / Minus

                                                                           
Query: 177     aaactttccgagctcccgatcactgcaatcggaataaatcctcaattgaggggccaatgg 236
               |||||||| ||| | | ||||| ||||||||||||||||||||||| |||||||||||| 
Sbjct: 8942456 aaactttctgagtttctgatcattgcaatcggaataaatcctcaatggaggggccaatgc 8942397

                                                                           
Query: 237     acattgcttcatccaccacttgcttcacactgggcctagcaatgctaaatagtgccagac 296
               ||||  |||||||  ||  ||| |||||| ||||||||||||||||||||  ||||||||
Sbjct: 8942396 acatgacttcatcagccctttgtttcacattgggcctagcaatgctaaatgatgccagac 8942337

                                                                           
Query: 297     cattagttgtaaccttgccacagccatgtatgtgaaggacctcaaggcgcatgcatccat 356
               ||||| | || | ||||||||| ||||| || || || || | |||||  |  || ||||
Sbjct: 8942336 cattattagtgatcttgccacatccatggatatgcagaacttgaaggcatacacagccat 8942277

                                                                           
Query: 357     ccttgagagcctgcaatccttggtcgcatatgtttcggcaacggttcacatgaagaattc 416
               ||   ||||||||||| |||||||| || ||||||||||||||||| ||||| |  ||||
Sbjct: 8942276 cccctagagcctgcaaaccttggtcacaaatgtttcggcaacggttaacatgcaagattc 8942217

                                                                           
Query: 417     ttagcttgttgcagttcgatccaatcgccgaccaaccaggtaagcggacgccatgacaga 476
               | ||||||||||||  | |||||||||| ||||| ||||| ||||| || ||||| ||||
Sbjct: 8942216 tcagcttgttgcagagcaatccaatcgcagaccatccaggcaagcgaactccatggcaga 8942157

                                                                           
Query: 477     cagcaaggttccactcctcgatcaacgggcacccactagctattgccaccacagaatcat 536
               |||| ||| |||| ||||| ||||| || ||||| ||||||||||||  |||||||||||
Sbjct: 8942156 cagcgaggctccattcctcaatcaatggacacccgctagctattgccgtcacagaatcat 8942097

                                     
Query: 537     cagtaagatagcggcacatcct 558
               | ||||| || |||||||||||
Sbjct: 8942096 cggtaaggtaacggcacatcct 8942075
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>gb|AC121965.3| Mus musculus BAC clone RP24-262G23 from chromosome 12, complete sequence
          Length = 170835

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 355    atccttgagagcctgcaatcctt 377
              |||||||||||||||||||||||
Sbjct: 149405 atccttgagagcctgcaatcctt 149427
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>gb|AC122033.5| Mus musculus BAC clone RP24-403A7 from chromosome 17, complete sequence
          Length = 119877

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 355   atccttgagagcctgcaatcctt 377
             |||||||||||||||||||||||
Sbjct: 95689 atccttgagagcctgcaatcctt 95711
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>gb|AC126254.3| Mus musculus BAC clone RP24-132D17 from chromosome 17, complete sequence
          Length = 167995

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 355    atccttgagagcctgcaatcctt 377
              |||||||||||||||||||||||
Sbjct: 164310 atccttgagagcctgcaatcctt 164288
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>gb|AC154392.18| Mus musculus chromosome 1, clone RP23-413K6, complete sequence
          Length = 205076

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 265    actgggcctagcaatgctaaatagtg 290
              |||||||| |||||||||||||||||
Sbjct: 109027 actgggccaagcaatgctaaatagtg 109052
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>ref|XM_638279.1| Dictyostelium discoideum hypothetical protein (DDB0217743), partial
            mRNA
          Length = 2697

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 162  tttgaaattttagctaaactt 182
            |||||||||||||||||||||
Sbjct: 1883 tttgaaattttagctaaactt 1863
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>gb|CP000027.1| Dehalococcoides ethenogenes 195, complete genome
          Length = 1469720

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 232    aatggacattgcttcatcca 251
              ||||||||||||||||||||
Sbjct: 157945 aatggacattgcttcatcca 157926
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>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome
          Length = 3696649

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 441     tcgccgaccaaccaggtaagcggacgcc 468
               |||||||||| ||||| |||||||||||
Sbjct: 3487902 tcgccgaccacccaggaaagcggacgcc 3487929
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>gb|AC132624.3| Mus musculus BAC clone RP23-77B21 from chromosome 18, complete sequence
          Length = 161099

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 160    actttgaaattttagctaaacttt 183
              ||||||||||||||||| ||||||
Sbjct: 106774 actttgaaattttagctgaacttt 106797
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>emb|BX323463.24| Zebrafish DNA sequence from clone DKEY-169J7 in linkage group 14,
            complete sequence
          Length = 86314

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 466  gccatgacagacagcaaggt 485
            ||||||||||||||||||||
Sbjct: 2567 gccatgacagacagcaaggt 2548
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>emb|BX897700.1| Bartonella quintana str. Toulouse, complete genome
          Length = 1581384

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 156    caaaactttgaaattttagc 175
              ||||||||||||||||||||
Sbjct: 921069 caaaactttgaaattttagc 921088
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>emb|AJ131022.1|DME131022 Drosophila melanogaster D-Sp1 gene for C2H2 zinc finger transcription
            factor
          Length = 3071

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 308  accttgccacagccatgtatgtga 331
            ||||||||||||||| ||||||||
Sbjct: 1574 accttgccacagccaggtatgtga 1551
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>gb|AC023702.4| Drosophila melanogaster X BAC RP98-24L2 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 159970

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 308    accttgccacagccatgtatgtga 331
              ||||||||||||||| ||||||||
Sbjct: 157313 accttgccacagccaggtatgtga 157290
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>ref|NM_167200.1| Drosophila melanogaster Sp1 CG1343-RB, transcript variant B (Sp1),
            mRNA
          Length = 2020

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 308  accttgccacagccatgtatgtga 331
            ||||||||||||||| ||||||||
Sbjct: 1056 accttgccacagccaggtatgtga 1033
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>ref|NM_132351.1| Drosophila melanogaster Sp1 CG1343-RA, transcript variant A (Sp1),
            mRNA
          Length = 2076

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 308  accttgccacagccatgtatgtga 331
            ||||||||||||||| ||||||||
Sbjct: 1112 accttgccacagccaggtatgtga 1089
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>dbj|AK155607.1| Mus musculus B6-derived CD11 +ve dendritic cells cDNA, RIKEN
            full-length enriched library, clone:F730021F21
            product:unclassifiable, full insert sequence
          Length = 4131

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 160  actttgaaattttagctaaacttt 183
            ||||||||||||||||| ||||||
Sbjct: 3265 actttgaaattttagctgaacttt 3242
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>gb|AC112697.4| Homo sapiens BAC clone RP11-562O10 from 2, complete sequence
          Length = 94769

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 312  tgccacagccatgtatgtga 331
            ||||||||||||||||||||
Sbjct: 9376 tgccacagccatgtatgtga 9357
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>gb|AC154674.2| Mus musculus BAC clone RP24-299A15 from chromosome 16, complete sequence
          Length = 152914

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 517    tattgccaccacagaatcatcagt 540
              |||| |||||||||||||||||||
Sbjct: 114293 tatttccaccacagaatcatcagt 114270
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>gb|AC130390.4| Drosophila melanogaster X BAC RP98-21O19 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 184175

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 308   accttgccacagccatgtatgtga 331
             ||||||||||||||| ||||||||
Sbjct: 98818 accttgccacagccaggtatgtga 98795
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>gb|U43375.1| Caenorhabditis elegans cosmid K09C4, complete sequence
          Length = 35444

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 163  ttgaaattttagctaaactt 182
            ||||||||||||||||||||
Sbjct: 9120 ttgaaattttagctaaactt 9101
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>emb|CT573015.11| Mouse DNA sequence from clone RP23-468I6 on chromosome 16, complete
              sequence
          Length = 162048

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 517    tattgccaccacagaatcatcagt 540
              |||| |||||||||||||||||||
Sbjct: 153053 tatttccaccacagaatcatcagt 153030
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>gb|AE003448.4| Drosophila melanogaster chromosome X, section 32 of 74 of the complete
              sequence
          Length = 318665

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 308    accttgccacagccatgtatgtga 331
              ||||||||||||||| ||||||||
Sbjct: 125707 accttgccacagccaggtatgtga 125684
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>gb|L42023.1| Haemophilus influenzae Rd KW20, complete genome
          Length = 1830138

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 353    ccatccttgagagcctgcaa 372
              ||||||||||||||||||||
Sbjct: 742577 ccatccttgagagcctgcaa 742596


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,464,987
Number of Sequences: 3902068
Number of extensions: 4464987
Number of successful extensions: 89781
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 89662
Number of HSP's gapped (non-prelim): 119
length of query: 594
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 571
effective length of database: 17,143,297,704
effective search space: 9788822988984
effective search space used: 9788822988984
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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