>emb|AJ634003.1| Schedonorus arundinaceus mRNA for putative mitogen-activated protein
            kinase (mapk gene)
          Length = 1470

 Score =  155 bits (78), Expect = 2e-34
 Identities = 114/126 (90%)
 Strand = Plus / Minus

                                                                        
Query: 353  aagatttaaaccaagaacgaacatgtgaagaccctggtgtggcacactgctgtcacatgt 412
            |||||||| || || |||||||||| ||||| ||||||| |||| |||||| ||||||||
Sbjct: 1187 aagatttatacaaaaaacgaacatgcgaagagcctggtgcggcatactgctctcacatgt 1128

                                                                        
Query: 413  tcattcctgcttgtcacatattcaccatcctggcggcctcggggtgatactggagcatct 472
            ||||||||||||||||||||||||||||  |||||||||| ||||| |||||||||||||
Sbjct: 1127 tcattcctgcttgtcacatattcaccattgtggcggcctcagggtggtactggagcatct 1068

                  
Query: 473  cctgcc 478
            ||||||
Sbjct: 1067 cctgcc 1062



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 86/101 (85%), Gaps = 2/101 (1%)
 Strand = Plus / Minus

                                                                        
Query: 214  aactgaactccgcttctacaatacagtagtccatatatactaccaagtactgacccacag 273
            ||||||| ||||||||||||| ||||||   ||||||||||| |||||| ||| ||| ||
Sbjct: 1335 aactgaattccgcttctacaacacagtacaacatatatacta-caagtagtgatccatag 1277

                                                     
Query: 274  ctagagaaatccatacgc-cgtttattgtgcacatatttac 313
            | ||| ||||||||||||  | |||||||||| ||||||||
Sbjct: 1276 ccagaaaaatccatacgctggcttattgtgcaaatatttac 1236



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 57/66 (86%), Gaps = 3/66 (4%)
 Strand = Plus / Minus

                                                                        
Query: 124  atagagcagcgtctagaattacaacttacaatcaggggaaaaa-agaagattacaactta 182
            |||||| ||||||||  |||||||||||||  ||||  ||||| | ||||||||||||||
Sbjct: 1407 atagaggagcgtctaagattacaacttaca--caggttaaaaagaaaagattacaactta 1350

                  
Query: 183  cacaag 188
            ||||||
Sbjct: 1349 cacaag 1344

>emb|AJ512642.1|OSA512642 Oryza sativa (japonica cultivar-group) mRNA for putative
            mitogen-activated protein kinase msrmk3 (msrmk3 gene)
          Length = 1371

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 104/128 (81%), Gaps = 4/128 (3%)
 Strand = Plus / Minus

                                                                        
Query: 353  aagatttaaaccaagaacgaacatgtgaagaccctggtgtggcacactgctgtcacatgt 412
            |||||||| || || ||| |||||||||||| | | |||| ||||  |||  ||||||||
Sbjct: 1203 aagatttatacaaaaaaccaacatgtgaagatcttagtgtagcacgttgccttcacatgt 1144

                                                                        
Query: 413  tcattcctgcttgtcacatattcaccatcctg--gcggcctcggggtgatactggagcat 470
            || ||| ||| ||||||||||||||  |||||   |  |||| |||||||| ||||||||
Sbjct: 1143 tcgttcttgcctgtcacatattcac--tcctgcaacaacctctgggtgatagtggagcat 1086

                    
Query: 471  ctcctgcc 478
            ||||||||
Sbjct: 1085 ctcctgcc 1078

>emb|AJ251330.1|OSA251330 Oryza sativa mRNA for MAPK4 protein (mapk4 gene)
          Length = 1653

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 104/128 (81%), Gaps = 4/128 (3%)
 Strand = Plus / Minus

                                                                        
Query: 353  aagatttaaaccaagaacgaacatgtgaagaccctggtgtggcacactgctgtcacatgt 412
            |||||||| || || ||| |||||||||||| | | |||| ||||  |||  ||||||||
Sbjct: 1407 aagatttatacaaaaaaccaacatgtgaagatcttagtgtagcacgttgccttcacatgt 1348

                                                                        
Query: 413  tcattcctgcttgtcacatattcaccatcctg--gcggcctcggggtgatactggagcat 470
            || ||| ||| ||||||||||||||  |||||   |  |||| |||||||| ||||||||
Sbjct: 1347 tcgttcttgcctgtcacatattcac--tcctgcaacaacctctgggtgatagtggagcat 1290

                    
Query: 471  ctcctgcc 478
            ||||||||
Sbjct: 1289 ctcctgcc 1282

>gb|AF216316.1| Oryza sativa MAP kinase 2 mRNA, complete cds
          Length = 1697

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 104/128 (81%), Gaps = 4/128 (3%)
 Strand = Plus / Minus

                                                                        
Query: 353  aagatttaaaccaagaacgaacatgtgaagaccctggtgtggcacactgctgtcacatgt 412
            |||||||| || || ||| |||||||||||| | | |||| ||||  |||  ||||||||
Sbjct: 1272 aagatttatacaaaaaaccaacatgtgaagatcttagtgtagcacgttgccttcacatgt 1213

                                                                        
Query: 413  tcattcctgcttgtcacatattcaccatcctg--gcggcctcggggtgatactggagcat 470
            || ||| ||| ||||||||||||||  |||||   |  |||| |||||||| ||||||||
Sbjct: 1212 tcgttcttgcctgtcacatattcac--tcctgcaacaacctctgggtgatagtggagcat 1155

                    
Query: 471  ctcctgcc 478
            ||||||||
Sbjct: 1154 ctcctgcc 1147

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 104/128 (81%), Gaps = 4/128 (3%)
 Strand = Plus / Minus

                                                                            
Query: 353      aagatttaaaccaagaacgaacatgtgaagaccctggtgtggcacactgctgtcacatgt 412
                |||||||| || || ||| |||||||||||| | | |||| ||||  |||  ||||||||
Sbjct: 28886315 aagatttatacaaaaaaccaacatgtgaagatcttagtgtagcacgttgccttcacatgt 28886256

                                                                            
Query: 413      tcattcctgcttgtcacatattcaccatcctg--gcggcctcggggtgatactggagcat 470
                || ||| ||| ||||||||||||||  |||||   |  |||| |||||||| ||||||||
Sbjct: 28886255 tcgttcttgcctgtcacatattcac--tcctgcaacaacctctgggtgatagtggagcat 28886198

                        
Query: 471      ctcctgcc 478
                ||||||||
Sbjct: 28886197 ctcctgcc 28886190

>dbj|AP004278.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0468G03
          Length = 143918

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 104/128 (81%), Gaps = 4/128 (3%)
 Strand = Plus / Minus

                                                                         
Query: 353   aagatttaaaccaagaacgaacatgtgaagaccctggtgtggcacactgctgtcacatgt 412
             |||||||| || || ||| |||||||||||| | | |||| ||||  |||  ||||||||
Sbjct: 36359 aagatttatacaaaaaaccaacatgtgaagatcttagtgtagcacgttgccttcacatgt 36300

                                                                         
Query: 413   tcattcctgcttgtcacatattcaccatcctg--gcggcctcggggtgatactggagcat 470
             || ||| ||| ||||||||||||||  |||||   |  |||| |||||||| ||||||||
Sbjct: 36299 tcgttcttgcctgtcacatattcac--tcctgcaacaacctctgggtgatagtggagcat 36242

                     
Query: 471   ctcctgcc 478
             ||||||||
Sbjct: 36241 ctcctgcc 36234

>emb|BX470150.13| Zebrafish DNA sequence from clone DKEY-164K14 in linkage group 23,
              complete sequence
          Length = 209342

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 372    aacatgtgaagaccctggtgtggcac 397
              ||||||||||||| ||||||||||||
Sbjct: 153578 aacatgtgaagactctggtgtggcac 153553

>dbj|AK071376.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023093O04, full
            insert sequence
          Length = 1692

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 64/76 (84%), Gaps = 4/76 (5%)
 Strand = Plus / Minus

                                                                        
Query: 405  tcacatgttcattcctgcttgtcacatattcaccatcctg--gcggcctcggggtgatac 462
            |||||||||| ||| ||| ||||||||||||||  |||||   |  |||| |||||||| 
Sbjct: 1321 tcacatgttcgttcttgcctgtcacatattcac--tcctgcaacaacctctgggtgatag 1264

                            
Query: 463  tggagcatctcctgcc 478
            ||||||||||||||||
Sbjct: 1263 tggagcatctcctgcc 1248

>ref|XM_239684.3| PREDICTED: Rattus norvegicus similar to Myosin XVIIIB (Myosin 18B)
            (LOC304551), mRNA
          Length = 8496

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 437  ccatcctggcggcctcggggt 457
            |||||||||||||||||||||
Sbjct: 2333 ccatcctggcggcctcggggt 2313

>gb|CP000103.1| Nitrosospira multiformis ATCC 25196, complete genome
          Length = 3184243

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 153   aatcaggggaaaaaagaagat 173
             |||||||||||||||||||||
Sbjct: 27783 aatcaggggaaaaaagaagat 27763

>gb|AE005674.1| Shigella flexneri 2a str. 301, complete genome
          Length = 4607203

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 343     aattgcattaaagatttaaa 362
               ||||||||||||||||||||
Sbjct: 1613681 aattgcattaaagatttaaa 1613662

>ref|XM_585790.2| PREDICTED: Bos taurus hypothetical LOC508934 (LOC508934), mRNA
          Length = 1057

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 346 tgcattaaagatttaaacca 365
           ||||||||||||||||||||
Sbjct: 329 tgcattaaagatttaaacca 348

>gb|U00096.2| Escherichia coli K-12 MG1655, complete genome
          Length = 4639675

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 343     aattgcattaaagatttaaa 362
               ||||||||||||||||||||
Sbjct: 1599309 aattgcattaaagatttaaa 1599290

>dbj|AP009048.1| Escherichia coli W3110 DNA, complete genome
          Length = 4646332

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 343     aattgcattaaagatttaaa 362
               ||||||||||||||||||||
Sbjct: 1602999 aattgcattaaagatttaaa 1602980

>gb|AC008446.5| Homo sapiens chromosome 5 clone CTC-340A15, complete sequence
          Length = 152232

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 342   taattgcattaaagatttaa 361
             ||||||||||||||||||||
Sbjct: 65217 taattgcattaaagatttaa 65198

>gb|AC106900.3| Homo sapiens BAC clone RP11-796E10 from 2, complete sequence
          Length = 149495

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 293  gtttattgtgcacatattta 312
            ||||||||||||||||||||
Sbjct: 7660 gtttattgtgcacatattta 7679

>gb|AE014073.1| Shigella flexneri 2a str. 2457T, complete genome
          Length = 4599354

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 343     aattgcattaaagatttaaa 362
               ||||||||||||||||||||
Sbjct: 1653318 aattgcattaaagatttaaa 1653299

>gb|AC113174.3| Homo sapiens chromosome 1 clone RP11-397A15, complete sequence
          Length = 175470

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 153   aatcaggggaaaaaagaaga 172
             ||||||||||||||||||||
Sbjct: 80371 aatcaggggaaaaaagaaga 80352

>gb|AC155253.1| Mus musculus BAC clone RP24-172G9 from 17, complete sequence
          Length = 160193

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 238    agtagtccatatatactacc 257
              ||||||||||||||||||||
Sbjct: 154908 agtagtccatatatactacc 154889

>emb|AL132801.5|CNS01DTN Human chromosome 14 DNA sequence BAC R-661D19 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 168624

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 172    attacaacttacacaagctt 191
              ||||||||||||||||||||
Sbjct: 143335 attacaacttacacaagctt 143354

>emb|CT030652.14| Mouse DNA sequence from clone RP23-48G20 on chromosome 17, complete
             sequence
          Length = 221351

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 238   agtagtccatatatactacc 257
             ||||||||||||||||||||
Sbjct: 96658 agtagtccatatatactacc 96639

>gb|AC163711.3| Gallus gallus BAC clone CH261-27J21 from chromosome ul, complete sequence
          Length = 232951

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 392    tggcacactgctgtcacatgttca 415
              ||||||||||||||| ||||||||
Sbjct: 206964 tggcacactgctgtctcatgttca 206941

>gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome
          Length = 5528445

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 343     aattgcattaaagatttaaa 362
               ||||||||||||||||||||
Sbjct: 1963265 aattgcattaaagatttaaa 1963284

>gb|AC149588.4| Mus musculus BAC clone RP23-366I10 from 15, complete sequence
          Length = 200656

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 343   aattgcattaaagatttaaa 362
             ||||||||||||||||||||
Sbjct: 53754 aattgcattaaagatttaaa 53735

>emb|AL929147.7| Mouse DNA sequence from clone RP23-429P18 on chromosome 2, complete
              sequence
          Length = 155602

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 341    ataattgcattaaagattta 360
              ||||||||||||||||||||
Sbjct: 131006 ataattgcattaaagattta 130987

>dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome
          Length = 5498450

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 343     aattgcattaaagatttaaa 362
               ||||||||||||||||||||
Sbjct: 2125207 aattgcattaaagatttaaa 2125188


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,694,186
Number of Sequences: 3902068
Number of extensions: 4694186
Number of successful extensions: 80434
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 80253
Number of HSP's gapped (non-prelim): 178
length of query: 479
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 457
effective length of database: 17,147,199,772
effective search space: 7836270295804
effective search space used: 7836270295804
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)