Clone Name | rbasd15o11 |
---|---|
Clone Library Name | barley_pub |
>gb|AY074784.1| Triticum aestivum dehydroascorbate reductase (DHAR) mRNA, complete cds Length = 956 Score = 648 bits (327), Expect = 0.0 Identities = 415/445 (93%) Strand = Plus / Minus Query: 259 ggcgggggagcttacgggttcaccttcggcgcccacccggcgatcaggttctccttggtc 318 |||||| | |||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 724 ggcgggagggcttacgggttcactttcggcgcccacccggcgatcaggttctccttggtc 665 Query: 319 ggcttggtcttgacgaacgactcgcggctgaagagagcctcggtgtaggcatggacgctg 378 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 664 gccttggtcttgacgaacgactcgcggctgaagagagcctcggtgtaggcatggacgctg 605 Query: 379 gtcagtgtttcagggaccttccagcctttgaagtgctccagggcaacctggaggtggaag 438 ||||| |||||||||||||||||||| ||||||||||||||||| |||||||| ||| || Sbjct: 604 gtcagggtttcagggaccttccagcccttgaagtgctccagggcgacctggagatggtag 545 Query: 439 agcttcggagccaagctgagatccgcggcggagacattcgccccgttgatatagggtcca 498 ||||||||||||| ||||||||| | ||||||| |||||||| ||||| ||||||||| Sbjct: 544 agcttcggagccaggctgagatcgacagcggagatgttcgccccattgatgtagggtcca 485 Query: 499 tgggcctttangtgctcttccagtgcctgcagctcgtcaacaagtgccttctccgagcca 558 |||||||| | ||||||||| || ||||||||||| |||||||||||||||||||| ||| Sbjct: 484 tgggccttcaggtgctcttcgagcgcctgcagctcatcaacaagtgccttctccgaacca 425 Query: 559 tcgctggcgtccttgctcttcaagaaggtgacaaaggtggagaagatttttgatcccact 618 |||||||| ||||||||||||||||| |||||||||||||||||||| |||||||||||| Sbjct: 424 tcgctggcatccttgctcttcaagaacgtgacaaaggtggagaagatctttgatcccact 365 Query: 619 gatgcatactcangaggggtcacaagtgatggagttgggtacttctcctcaatgacttga 678 |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 364 gatgcatattcagcaggggtcacaagtgatggagttgggtacttctcctcaatgacttga 305 Query: 679 gtaatcacatcagaatcagcaatcc 703 || |||||||||||||||||||||| Sbjct: 304 gtgatcacatcagaatcagcaatcc 280 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Minus Query: 149 aggctcgctcgcattattccaa 170 |||||||||||||||||||||| Sbjct: 806 aggctcgctcgcattattccaa 785
>emb|AJ622892.1| Triticum durum partial mRNA for DRP5 protein (drg5 gene) Length = 478 Score = 474 bits (239), Expect = e-130 Identities = 303/325 (93%) Strand = Plus / Plus Query: 379 gtcagtgtttcagggaccttccagcctttgaagtgctccagggcaacctggaggtggaag 438 ||||| |||||||||||||||||||| ||||||||||||||||| |||||||||||| || Sbjct: 1 gtcagggtttcagggaccttccagcccttgaagtgctccagggcgacctggaggtggtag 60 Query: 439 agcttcggagccaagctgagatccgcggcggagacattcgccccgttgatatagggtcca 498 ||||||||||||| ||||||||| ||||||||| |||||||||||||| ||||||||| Sbjct: 61 agcttcggagccaggctgagatcgacggcggagatgttcgccccgttgatgtagggtcca 120 Query: 499 tgggcctttangtgctcttccagtgcctgcagctcgtcaacaagtgccttctccgagcca 558 |||||||| | ||||||||| ||||||||||||||||||||||||||||| ||||| ||| Sbjct: 121 tgggccttcaggtgctcttcgagtgcctgcagctcgtcaacaagtgccttttccgaacca 180 Query: 559 tcgctggcgtccttgctcttcaagaaggtgacaaaggtggagaagatttttgatcccact 618 |||||||| ||||||||||||||||| |||||||||||||||||||| |||||||||||| Sbjct: 181 tcgctggcatccttgctcttcaagaacgtgacaaaggtggagaagatctttgatcccact 240 Query: 619 gatgcatactcangaggggtcacaagtgatggagttgggtacttctcctcaatgacttga 678 |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 gatgcatattcagcaggggtcacaagtgatggagttgggtacttctcctcaatgacttga 300 Query: 679 gtaatcacatcagaatcagcaatcc 703 || |||||||||||||||||||||| Sbjct: 301 gtgatcacatcagaatcagcaatcc 325
>gb|DQ090998.1| Puccinellia tenuiflora dehydroascorbate reductase protein mRNA, partial cds Length = 202 Score = 238 bits (120), Expect = 2e-59 Identities = 162/176 (92%) Strand = Plus / Minus Query: 268 gcttacgggttcaccttcggcgcccacccggcgatcaggttctccttggtcggcttggtc 327 |||||||||||||| || |||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 200 gcttacgggttcactttgggcgcccatccggcgatcaggttctccttggtgggcttggtc 141 Query: 328 ttgacgaacgactcgcggctgaagagagcctcggtgtaggcatggacgctggtcagtgtt 387 |||||||| || || |||||||| ||||||| |||||||||||||||||||||||| ||| Sbjct: 140 ttgacgaaggattcccggctgaacagagccttggtgtaggcatggacgctggtcagggtt 81 Query: 388 tcagggaccttccagcctttgaagtgctccagggcaacctggaggtggaagagctt 443 || ||||||||||| |||||||| |||||||||||||||||||| ||||||||||| Sbjct: 80 tcggggaccttccatcctttgaaatgctccagggcaacctggagatggaagagctt 25
>gb|DQ093638.1| Eustoma grandiflorum dehydroascorbate reductase protein mRNA, partial cds Length = 195 Score = 236 bits (119), Expect = 8e-59 Identities = 158/171 (92%) Strand = Plus / Minus Query: 273 cgggttcaccttcggcgcccacccggcgatcaggttctccttggtcggcttggtcttgac 332 ||||||||| || |||||||| ||||||||||||||||||||||| |||||||||||||| Sbjct: 195 cgggttcactttgggcgcccatccggcgatcaggttctccttggtgggcttggtcttgac 136 Query: 333 gaacgactcgcggctgaagagagcctcggtgtaggcatggacgctggtcagtgtttcagg 392 ||| || || |||||||| ||||||| |||||||||||||||||||||||| |||||||| Sbjct: 135 gaaggattcccggctgaacagagccttggtgtaggcatggacgctggtcagggtttcagg 76 Query: 393 gaccttccagcctttgaagtgctccagggcaacctggaggtggaagagctt 443 ||||||||| |||||||| |||||||||||||||||||| ||||||||||| Sbjct: 75 gaccttccatcctttgaaatgctccagggcaacctggagatggaagagctt 25
>gb|AY106435.1| Zea mays PCO106999 mRNA sequence Length = 1141 Score = 228 bits (115), Expect = 2e-56 Identities = 347/425 (81%) Strand = Plus / Minus Query: 277 ttcaccttcggcgcccacccggcgatcaggttctccttggtcggcttggtcttgacgaac 336 |||||||| |||||||| || || |||| || ||||| || ||||| |||||||| || Sbjct: 728 ttcaccttgggcgcccatcccgcaatcacgtgctcctcggatggcttagtcttgacaaaa 669 Query: 337 gactcgcggctgaagagagcctcggtgtaggcatggacgctggtcagtgtttcagggacc 396 || || |||||||| ||||||| ||||||||| |||||| |||| || |||| |||| | Sbjct: 668 gattcacggctgaaaagagccttggtgtaggcgtggacgttggttaggttttctgggatc 609 Query: 397 ttccagcctttgaagtgctccagggcaacctggaggtggaagagcttcggagccaagctg 456 |||||||||||||| |||||||| || | ||| |||||||| ||||| || ||| ||| Sbjct: 608 ttccagcctttgaaatgctccagtgcgatctgtaggtggaaaagctttggccccaggcta 549 Query: 457 agatccgcggcggagacattcgccccgttgatatagggtccatgggcctttangtgctct 516 ||||| || || || || ||| |||| || || ||||| ||||| || || | || || Sbjct: 548 agatcagctgctgacacgttctccccatttatgtaggggccatgagctttgagatgatca 489 Query: 517 tccagtgcctgcagctcgtcaacaagtgccttctccgagccatcgctggcgtccttgctc 576 ||||||||||||||||| || | ||| |||||||| || ||||| || || ||||||||| Sbjct: 488 tccagtgcctgcagctcatccagaagcgccttctctgacccatcactagcatccttgctc 429 Query: 577 ttcaagaaggtgacaaaggtggagaagatttttgatcccactgatgcatactcangaggg 636 |||||||| ||||||||| | ||| || |||||||||||||||||||| || ||||| Sbjct: 428 ttcaagaacttgacaaaggctgggaaaatctttgatcccactgatgcatattctggaggg 369 Query: 637 gtcacaagtgatggagttgggtacttctcctcaatgacttgagtaatcacatcagaatca 696 || || || || ||||||||| ||||||||||||||||||| || || |||||||||||| Sbjct: 368 gtgaccagagaaggagttgggaacttctcctcaatgacttgggtgattacatcagaatca 309 Query: 697 gcaat 701 ||||| Sbjct: 308 gcaat 304
>gb|AY074786.1| Oryza sativa dehydroascorbate reductase (DHAR) mRNA, complete cds Length = 1067 Score = 200 bits (101), Expect = 4e-48 Identities = 309/379 (81%) Strand = Plus / Minus Query: 325 gtcttgacgaacgactcgcggctgaagagagcctcggtgtaggcatggacgctggtcagt 384 ||||||| ||| || |||||||| || |||||||| ||||| ||||| || |||| || Sbjct: 666 gtcttgatgaaagattcgcggctaaacagagcctctgtgtaagcatgaacattggttagg 607 Query: 385 gtttcagggaccttccagcctttgaagtgctccagggcaacctggaggtggaagagcttc 444 ||| |||| ||||||||||||||| |||||||| ||||||||||| ||| ||||||| Sbjct: 606 tcttccgggatcttccagcctttgaaatgctccagagcaacctggagatggtagagcttt 547 Query: 445 ggagccaagctgagatccgcggcggagacattcgccccgttgatatagggtccatgggcc 504 || |||| ||| || || || || || | ||| |||||||||| |||| ||||| || Sbjct: 546 ggtgccaggctaaggtcagcagctgaaatgttctgcccgttgataaaggggccatgagct 487 Query: 505 tttangtgctcttccagtgcctgcagctcgtcaacaagtgccttctccgagccatcgctg 564 || | ||||| || ||||||||||| || || |||||||||||| || ||||| | Sbjct: 486 ttcagatgctcctcgagtgcctgcagttcagtaagaagtgccttctctgaaccatcattt 427 Query: 565 gcgtccttgctcttcaagaaggtgacaaaggtggagaagatttttgatcccactgatgca 624 | ||||||||||||||||| || ||| ||||| ||||||||||||||||||||| Sbjct: 426 ggatccttgctcttcaagaacgttgtgaagcatgagaaaatttttgatcccactgatgca 367 Query: 625 tactcangaggggtcacaagtgatggagttgggtacttctcctcaatgacttgagtaatc 684 |||||| ||||||| ||||| || || ||||||||||||||||||||||||||||| ||| Sbjct: 366 tactcaggaggggtgacaagagacggggttgggtacttctcctcaatgacttgagtgatc 307 Query: 685 acatcagaatcagcaatcc 703 ||||||||||||| ||||| Sbjct: 306 acatcagaatcaggaatcc 288
>dbj|AK070895.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023074C02, full insert sequence Length = 1198 Score = 200 bits (101), Expect = 4e-48 Identities = 309/379 (81%) Strand = Plus / Minus Query: 325 gtcttgacgaacgactcgcggctgaagagagcctcggtgtaggcatggacgctggtcagt 384 ||||||| ||| || |||||||| || |||||||| ||||| ||||| || |||| || Sbjct: 667 gtcttgatgaaagattcgcggctaaacagagcctctgtgtaagcatgaacattggttagg 608 Query: 385 gtttcagggaccttccagcctttgaagtgctccagggcaacctggaggtggaagagcttc 444 ||| |||| ||||||||||||||| |||||||| ||||||||||| ||| ||||||| Sbjct: 607 tcttccgggatcttccagcctttgaaatgctccagagcaacctggagatggtagagcttt 548 Query: 445 ggagccaagctgagatccgcggcggagacattcgccccgttgatatagggtccatgggcc 504 || |||| ||| || || || || || | ||| |||||||||| |||| ||||| || Sbjct: 547 ggtgccaggctaaggtcagcagctgaaatgttctgcccgttgataaaggggccatgagct 488 Query: 505 tttangtgctcttccagtgcctgcagctcgtcaacaagtgccttctccgagccatcgctg 564 || | ||||| || ||||||||||| || || |||||||||||| || ||||| | Sbjct: 487 ttcagatgctcctcgagtgcctgcagttcagtaagaagtgccttctctgaaccatcattt 428 Query: 565 gcgtccttgctcttcaagaaggtgacaaaggtggagaagatttttgatcccactgatgca 624 | ||||||||||||||||| || ||| ||||| ||||||||||||||||||||| Sbjct: 427 ggatccttgctcttcaagaacgttgtgaagcatgagaaaatttttgatcccactgatgca 368 Query: 625 tactcangaggggtcacaagtgatggagttgggtacttctcctcaatgacttgagtaatc 684 |||||| ||||||| ||||| || || ||||||||||||||||||||||||||||| ||| Sbjct: 367 tactcaggaggggtgacaagagacggggttgggtacttctcctcaatgacttgagtgatc 308 Query: 685 acatcagaatcagcaatcc 703 ||||||||||||| ||||| Sbjct: 307 acatcagaatcaggaatcc 289
>dbj|AK061836.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-D08, full insert sequence Length = 1053 Score = 200 bits (101), Expect = 4e-48 Identities = 309/379 (81%) Strand = Plus / Minus Query: 325 gtcttgacgaacgactcgcggctgaagagagcctcggtgtaggcatggacgctggtcagt 384 ||||||| ||| || |||||||| || |||||||| ||||| ||||| || |||| || Sbjct: 671 gtcttgatgaaagattcgcggctaaacagagcctctgtgtaagcatgaacattggttagg 612 Query: 385 gtttcagggaccttccagcctttgaagtgctccagggcaacctggaggtggaagagcttc 444 ||| |||| ||||||||||||||| |||||||| ||||||||||| ||| ||||||| Sbjct: 611 tcttccgggatcttccagcctttgaaatgctccagagcaacctggagatggtagagcttt 552 Query: 445 ggagccaagctgagatccgcggcggagacattcgccccgttgatatagggtccatgggcc 504 || |||| ||| || || || || || | ||| |||||||||| |||| ||||| || Sbjct: 551 ggtgccaggctaaggtcagcagctgaaatgttctgcccgttgataaaggggccatgagct 492 Query: 505 tttangtgctcttccagtgcctgcagctcgtcaacaagtgccttctccgagccatcgctg 564 || | ||||| || ||||||||||| || || |||||||||||| || ||||| | Sbjct: 491 ttcagatgctcctcgagtgcctgcagttcagtaagaagtgccttctctgaaccatcattt 432 Query: 565 gcgtccttgctcttcaagaaggtgacaaaggtggagaagatttttgatcccactgatgca 624 | ||||||||||||||||| || ||| ||||| ||||||||||||||||||||| Sbjct: 431 ggatccttgctcttcaagaacgttgtgaagcatgagaaaatttttgatcccactgatgca 372 Query: 625 tactcangaggggtcacaagtgatggagttgggtacttctcctcaatgacttgagtaatc 684 |||||| ||||||| ||||| || || ||||||||||||||||||||||||||||| ||| Sbjct: 371 tactcaggaggggtgacaagagacggggttgggtacttctcctcaatgacttgagtgatc 312 Query: 685 acatcagaatcagcaatcc 703 ||||||||||||| ||||| Sbjct: 311 acatcagaatcaggaatcc 293
>dbj|AB037970.1| Oryza sativa (japonica cultivar-group) DHAR1 mRNA for GSH-dependent dehydroascorbate reductase 1, complete cds Length = 1044 Score = 200 bits (101), Expect = 4e-48 Identities = 309/379 (81%) Strand = Plus / Minus Query: 325 gtcttgacgaacgactcgcggctgaagagagcctcggtgtaggcatggacgctggtcagt 384 ||||||| ||| || |||||||| || |||||||| ||||| ||||| || |||| || Sbjct: 636 gtcttgatgaaagattcgcggctaaacagagcctctgtgtaagcatgaacattggttagg 577 Query: 385 gtttcagggaccttccagcctttgaagtgctccagggcaacctggaggtggaagagcttc 444 ||| |||| ||||||||||||||| |||||||| ||||||||||| ||| ||||||| Sbjct: 576 tcttccgggatcttccagcctttgaaatgctccagagcaacctggagatggtagagcttt 517 Query: 445 ggagccaagctgagatccgcggcggagacattcgccccgttgatatagggtccatgggcc 504 || |||| ||| || || || || || | ||| |||||||||| |||| ||||| || Sbjct: 516 ggtgccaggctaaggtcagcagctgaaatgttctgcccgttgataaaggggccatgagct 457 Query: 505 tttangtgctcttccagtgcctgcagctcgtcaacaagtgccttctccgagccatcgctg 564 || | ||||| || ||||||||||| || || |||||||||||| || ||||| | Sbjct: 456 ttcagatgctcctcgagtgcctgcagttcagtaagaagtgccttctctgaaccatcattt 397 Query: 565 gcgtccttgctcttcaagaaggtgacaaaggtggagaagatttttgatcccactgatgca 624 | ||||||||||||||||| || ||| ||||| ||||||||||||||||||||| Sbjct: 396 ggatccttgctcttcaagaacgttgtgaagcatgagaaaatttttgatcccactgatgca 337 Query: 625 tactcangaggggtcacaagtgatggagttgggtacttctcctcaatgacttgagtaatc 684 |||||| ||||||| ||||| || || ||||||||||||||||||||||||||||| ||| Sbjct: 336 tactcaggaggggtgacaagagacggggttgggtacttctcctcaatgacttgagtgatc 277 Query: 685 acatcagaatcagcaatcc 703 ||||||||||||| ||||| Sbjct: 276 acatcagaatcaggaatcc 258
>gb|AC078977.6| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0496H07, complete sequence Length = 164477 Score = 123 bits (62), Expect = 8e-25 Identities = 82/89 (92%) Strand = Plus / Plus Query: 615 cactgatgcatactcangaggggtcacaagtgatggagttgggtacttctcctcaatgac 674 |||||||||||||||| ||||||| ||||| || || ||||||||||||||||||||||| Sbjct: 51804 cactgatgcatactcaggaggggtgacaagagacggggttgggtacttctcctcaatgac 51863 Query: 675 ttgagtaatcacatcagaatcagcaatcc 703 |||||| |||||||||||||||| ||||| Sbjct: 51864 ttgagtgatcacatcagaatcaggaatcc 51892 Score = 65.9 bits (33), Expect = 2e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 391 gggaccttccagcctttgaagtgctccagggcaacctggaggtggaagagctt 443 |||| ||||||||||||||| |||||||| ||||||||||| ||| ||||||| Sbjct: 50721 gggatcttccagcctttgaaatgctccagagcaacctggagatggtagagctt 50773
>gb|AC108504.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1654_B10, complete sequence Length = 140282 Score = 123 bits (62), Expect = 8e-25 Identities = 82/89 (92%) Strand = Plus / Plus Query: 615 cactgatgcatactcangaggggtcacaagtgatggagttgggtacttctcctcaatgac 674 |||||||||||||||| ||||||| ||||| || || ||||||||||||||||||||||| Sbjct: 119823 cactgatgcatactcaggaggggtgacaagagacggggttgggtacttctcctcaatgac 119882 Query: 675 ttgagtaatcacatcagaatcagcaatcc 703 |||||| |||||||||||||||| ||||| Sbjct: 119883 ttgagtgatcacatcagaatcaggaatcc 119911 Score = 65.9 bits (33), Expect = 2e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 391 gggaccttccagcctttgaagtgctccagggcaacctggaggtggaagagctt 443 |||| ||||||||||||||| |||||||| ||||||||||| ||| ||||||| Sbjct: 118740 gggatcttccagcctttgaaatgctccagagcaacctggagatggtagagctt 118792
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 123 bits (62), Expect = 8e-25 Identities = 82/89 (92%) Strand = Plus / Plus Query: 615 cactgatgcatactcangaggggtcacaagtgatggagttgggtacttctcctcaatgac 674 |||||||||||||||| ||||||| ||||| || || ||||||||||||||||||||||| Sbjct: 847381 cactgatgcatactcaggaggggtgacaagagacggggttgggtacttctcctcaatgac 847440 Query: 675 ttgagtaatcacatcagaatcagcaatcc 703 |||||| |||||||||||||||| ||||| Sbjct: 847441 ttgagtgatcacatcagaatcaggaatcc 847469 Score = 65.9 bits (33), Expect = 2e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 391 gggaccttccagcctttgaagtgctccagggcaacctggaggtggaagagctt 443 |||| ||||||||||||||| |||||||| ||||||||||| ||| ||||||| Sbjct: 846298 gggatcttccagcctttgaaatgctccagagcaacctggagatggtagagctt 846350
>gb|DQ430382.1| Sorghum propinquum locus pSB1945 genomic sequence Length = 610 Score = 73.8 bits (37), Expect = 7e-10 Identities = 73/85 (85%) Strand = Plus / Minus Query: 511 tgctcttccagtgcctgcagctcgtcaacaagtgccttctccgagccatcgctggcgtcc 570 ||||| ||||||||||||||||| || | ||| |||||||| || ||||| || || ||| Sbjct: 597 tgctcatccagtgcctgcagctcatccagaagcgccttctctgaaccatcactagcatcc 538 Query: 571 ttgctcttcaagaaggtgacaaagg 595 |||||||||||||| ||||||||| Sbjct: 537 ttgctcttcaagaacttgacaaagg 513
>gb|DQ430381.1| Sorghum bicolor voucher PI585454 locus pSB1945 genomic sequence Length = 618 Score = 73.8 bits (37), Expect = 7e-10 Identities = 73/85 (85%) Strand = Plus / Minus Query: 511 tgctcttccagtgcctgcagctcgtcaacaagtgccttctccgagccatcgctggcgtcc 570 ||||| ||||||||||||||||| || | ||| |||||||| || ||||| || || ||| Sbjct: 605 tgctcatccagtgcctgcagctcatccagaagcgccttctctgaaccatcactagcatcc 546 Query: 571 ttgctcttcaagaaggtgacaaagg 595 |||||||||||||| ||||||||| Sbjct: 545 ttgctcttcaagaacttgacaaagg 521
>gb|DQ430380.1| Sorghum bicolor voucher PI267539 locus pSB1945 genomic sequence Length = 798 Score = 73.8 bits (37), Expect = 7e-10 Identities = 73/85 (85%) Strand = Plus / Minus Query: 511 tgctcttccagtgcctgcagctcgtcaacaagtgccttctccgagccatcgctggcgtcc 570 ||||| ||||||||||||||||| || | ||| |||||||| || ||||| || || ||| Sbjct: 785 tgctcatccagtgcctgcagctcatccagaagcgccttctctgaaccatcactagcatcc 726 Query: 571 ttgctcttcaagaaggtgacaaagg 595 |||||||||||||| ||||||||| Sbjct: 725 ttgctcttcaagaacttgacaaagg 701
>gb|DQ430378.1| Sorghum bicolor voucher PI221607 locus pSB1945 genomic sequence Length = 798 Score = 73.8 bits (37), Expect = 7e-10 Identities = 73/85 (85%) Strand = Plus / Minus Query: 511 tgctcttccagtgcctgcagctcgtcaacaagtgccttctccgagccatcgctggcgtcc 570 ||||| ||||||||||||||||| || | ||| |||||||| || ||||| || || ||| Sbjct: 785 tgctcatccagtgcctgcagctcatccagaagcgccttctctgaaccatcactagcatcc 726 Query: 571 ttgctcttcaagaaggtgacaaagg 595 |||||||||||||| ||||||||| Sbjct: 725 ttgctcttcaagaacttgacaaagg 701
>gb|DQ430377.1| Sorghum bicolor voucher PI152702 locus pSB1945 genomic sequence Length = 798 Score = 73.8 bits (37), Expect = 7e-10 Identities = 73/85 (85%) Strand = Plus / Minus Query: 511 tgctcttccagtgcctgcagctcgtcaacaagtgccttctccgagccatcgctggcgtcc 570 ||||| ||||||||||||||||| || | ||| |||||||| || ||||| || || ||| Sbjct: 785 tgctcatccagtgcctgcagctcatccagaagcgccttctctgaaccatcactagcatcc 726 Query: 571 ttgctcttcaagaaggtgacaaagg 595 |||||||||||||| ||||||||| Sbjct: 725 ttgctcttcaagaacttgacaaagg 701
>gb|DQ430376.1| Sorghum bicolor voucher NSL92371 locus pSB1945 genomic sequence Length = 798 Score = 73.8 bits (37), Expect = 7e-10 Identities = 73/85 (85%) Strand = Plus / Minus Query: 511 tgctcttccagtgcctgcagctcgtcaacaagtgccttctccgagccatcgctggcgtcc 570 ||||| ||||||||||||||||| || | ||| |||||||| || ||||| || || ||| Sbjct: 785 tgctcatccagtgcctgcagctcatccagaagcgccttctctgaaccatcactagcatcc 726 Query: 571 ttgctcttcaagaaggtgacaaagg 595 |||||||||||||| ||||||||| Sbjct: 725 ttgctcttcaagaacttgacaaagg 701
>gb|DQ430375.1| Sorghum bicolor voucher NSL87902 locus pSB1945 genomic sequence Length = 798 Score = 73.8 bits (37), Expect = 7e-10 Identities = 73/85 (85%) Strand = Plus / Minus Query: 511 tgctcttccagtgcctgcagctcgtcaacaagtgccttctccgagccatcgctggcgtcc 570 ||||| ||||||||||||||||| || | ||| |||||||| || ||||| || || ||| Sbjct: 785 tgctcatccagtgcctgcagctcatccagaagcgccttctctgaaccatcactagcatcc 726 Query: 571 ttgctcttcaagaaggtgacaaagg 595 |||||||||||||| ||||||||| Sbjct: 725 ttgctcttcaagaacttgacaaagg 701
>gb|DQ430374.1| Sorghum bicolor voucher NSL87666 locus pSB1945 genomic sequence Length = 798 Score = 73.8 bits (37), Expect = 7e-10 Identities = 73/85 (85%) Strand = Plus / Minus Query: 511 tgctcttccagtgcctgcagctcgtcaacaagtgccttctccgagccatcgctggcgtcc 570 ||||| ||||||||||||||||| || | ||| |||||||| || ||||| || || ||| Sbjct: 785 tgctcatccagtgcctgcagctcatccagaagcgccttctctgaaccatcactagcatcc 726 Query: 571 ttgctcttcaagaaggtgacaaagg 595 |||||||||||||| ||||||||| Sbjct: 725 ttgctcttcaagaacttgacaaagg 701
>gb|DQ430373.1| Sorghum bicolor voucher NSL77217 locus pSB1945 genomic sequence Length = 798 Score = 73.8 bits (37), Expect = 7e-10 Identities = 73/85 (85%) Strand = Plus / Minus Query: 511 tgctcttccagtgcctgcagctcgtcaacaagtgccttctccgagccatcgctggcgtcc 570 ||||| ||||||||||||||||| || | ||| |||||||| || ||||| || || ||| Sbjct: 785 tgctcatccagtgcctgcagctcatccagaagcgccttctctgaaccatcactagcatcc 726 Query: 571 ttgctcttcaagaaggtgacaaagg 595 |||||||||||||| ||||||||| Sbjct: 725 ttgctcttcaagaacttgacaaagg 701
>gb|DQ430372.1| Sorghum bicolor voucher NSL77034 locus pSB1945 genomic sequence Length = 798 Score = 73.8 bits (37), Expect = 7e-10 Identities = 73/85 (85%) Strand = Plus / Minus Query: 511 tgctcttccagtgcctgcagctcgtcaacaagtgccttctccgagccatcgctggcgtcc 570 ||||| ||||||||||||||||| || | ||| |||||||| || ||||| || || ||| Sbjct: 785 tgctcatccagtgcctgcagctcatccagaagcgccttctctgaaccatcactagcatcc 726 Query: 571 ttgctcttcaagaaggtgacaaagg 595 |||||||||||||| ||||||||| Sbjct: 725 ttgctcttcaagaacttgacaaagg 701
>gb|DQ430371.1| Sorghum bicolor voucher NSL56174 locus pSB1945 genomic sequence Length = 798 Score = 73.8 bits (37), Expect = 7e-10 Identities = 73/85 (85%) Strand = Plus / Minus Query: 511 tgctcttccagtgcctgcagctcgtcaacaagtgccttctccgagccatcgctggcgtcc 570 ||||| ||||||||||||||||| || | ||| |||||||| || ||||| || || ||| Sbjct: 785 tgctcatccagtgcctgcagctcatccagaagcgccttctctgaaccatcactagcatcc 726 Query: 571 ttgctcttcaagaaggtgacaaagg 595 |||||||||||||| ||||||||| Sbjct: 725 ttgctcttcaagaacttgacaaagg 701
>gb|DQ430370.1| Sorghum bicolor voucher NSL56003 locus pSB1945 genomic sequence Length = 798 Score = 73.8 bits (37), Expect = 7e-10 Identities = 73/85 (85%) Strand = Plus / Minus Query: 511 tgctcttccagtgcctgcagctcgtcaacaagtgccttctccgagccatcgctggcgtcc 570 ||||| ||||||||||||||||| || | ||| |||||||| || ||||| || || ||| Sbjct: 785 tgctcatccagtgcctgcagctcatccagaagcgccttctctgaaccatcactagcatcc 726 Query: 571 ttgctcttcaagaaggtgacaaagg 595 |||||||||||||| ||||||||| Sbjct: 725 ttgctcttcaagaacttgacaaagg 701
>gb|DQ430369.1| Sorghum bicolor voucher NSL55243 locus pSB1945 genomic sequence Length = 798 Score = 73.8 bits (37), Expect = 7e-10 Identities = 73/85 (85%) Strand = Plus / Minus Query: 511 tgctcttccagtgcctgcagctcgtcaacaagtgccttctccgagccatcgctggcgtcc 570 ||||| ||||||||||||||||| || | ||| |||||||| || ||||| || || ||| Sbjct: 785 tgctcatccagtgcctgcagctcatccagaagcgccttctctgaaccatcactagcatcc 726 Query: 571 ttgctcttcaagaaggtgacaaagg 595 |||||||||||||| ||||||||| Sbjct: 725 ttgctcttcaagaacttgacaaagg 701
>gb|DQ430368.1| Sorghum bicolor voucher NSL51365 locus pSB1945 genomic sequence Length = 798 Score = 73.8 bits (37), Expect = 7e-10 Identities = 73/85 (85%) Strand = Plus / Minus Query: 511 tgctcttccagtgcctgcagctcgtcaacaagtgccttctccgagccatcgctggcgtcc 570 ||||| ||||||||||||||||| || | ||| |||||||| || ||||| || || ||| Sbjct: 785 tgctcatccagtgcctgcagctcatccagaagcgccttctctgaaccatcactagcatcc 726 Query: 571 ttgctcttcaagaaggtgacaaagg 595 |||||||||||||| ||||||||| Sbjct: 725 ttgctcttcaagaacttgacaaagg 701
>gb|DQ430367.1| Sorghum bicolor voucher NSL51030 locus pSB1945 genomic sequence Length = 618 Score = 73.8 bits (37), Expect = 7e-10 Identities = 73/85 (85%) Strand = Plus / Minus Query: 511 tgctcttccagtgcctgcagctcgtcaacaagtgccttctccgagccatcgctggcgtcc 570 ||||| ||||||||||||||||| || | ||| |||||||| || ||||| || || ||| Sbjct: 605 tgctcatccagtgcctgcagctcatccagaagcgccttctctgaaccatcactagcatcc 546 Query: 571 ttgctcttcaagaaggtgacaaagg 595 |||||||||||||| ||||||||| Sbjct: 545 ttgctcttcaagaacttgacaaagg 521
>gb|DQ430366.1| Sorghum bicolor voucher NSL50875 locus pSB1945 genomic sequence Length = 798 Score = 73.8 bits (37), Expect = 7e-10 Identities = 73/85 (85%) Strand = Plus / Minus Query: 511 tgctcttccagtgcctgcagctcgtcaacaagtgccttctccgagccatcgctggcgtcc 570 ||||| ||||||||||||||||| || | ||| |||||||| || ||||| || || ||| Sbjct: 785 tgctcatccagtgcctgcagctcatccagaagcgccttctctgaaccatcactagcatcc 726 Query: 571 ttgctcttcaagaaggtgacaaagg 595 |||||||||||||| ||||||||| Sbjct: 725 ttgctcttcaagaacttgacaaagg 701
>gb|DQ430365.1| Sorghum bicolor voucher BTx623 locus pSB1945 genomic sequence Length = 798 Score = 73.8 bits (37), Expect = 7e-10 Identities = 73/85 (85%) Strand = Plus / Minus Query: 511 tgctcttccagtgcctgcagctcgtcaacaagtgccttctccgagccatcgctggcgtcc 570 ||||| ||||||||||||||||| || | ||| |||||||| || ||||| || || ||| Sbjct: 785 tgctcatccagtgcctgcagctcatccagaagcgccttctctgaaccatcactagcatcc 726 Query: 571 ttgctcttcaagaaggtgacaaagg 595 |||||||||||||| ||||||||| Sbjct: 725 ttgctcttcaagaacttgacaaagg 701
>gb|DQ430379.1| Sorghum bicolor voucher PI267408 locus pSB1945 genomic sequence Length = 609 Score = 65.9 bits (33), Expect = 2e-07 Identities = 72/85 (84%) Strand = Plus / Minus Query: 511 tgctcttccagtgcctgcagctcgtcaacaagtgccttctccgagccatcgctggcgtcc 570 ||||| ||||||||||||||||| || | ||| |||||||| || ||||| || || ||| Sbjct: 596 tgctcatccagtgcctgcagctcatccagaagcgccttctctgaaccatcactagcatcc 537 Query: 571 ttgctcttcaagaaggtgacaaagg 595 |||||||||| ||| ||||||||| Sbjct: 536 ttgctcttcaggaacttgacaaagg 512
>gb|AE017283.1| Propionibacterium acnes KPA171202, complete genome Length = 2560265 Score = 44.1 bits (22), Expect = 0.62 Identities = 25/26 (96%) Strand = Plus / Minus Query: 315 ggtcggcttggtcttgacgaacgact 340 ||||||| |||||||||||||||||| Sbjct: 1119794 ggtcggcctggtcttgacgaacgact 1119769
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 44.1 bits (22), Expect = 0.62 Identities = 40/46 (86%) Strand = Plus / Plus Query: 655 gggtacttctcctcaatgacttgagtaatcacatcagaatcagcaa 700 ||||||||||| || || |||| ||||| |||||||||||||||| Sbjct: 6905074 gggtacttctcttctatcgcttgtgtaataacatcagaatcagcaa 6905119
>dbj|AP005522.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0479H10 Length = 139874 Score = 44.1 bits (22), Expect = 0.62 Identities = 40/46 (86%) Strand = Plus / Plus Query: 655 gggtacttctcctcaatgacttgagtaatcacatcagaatcagcaa 700 ||||||||||| || || |||| ||||| |||||||||||||||| Sbjct: 94599 gggtacttctcttctatcgcttgtgtaataacatcagaatcagcaa 94644
>dbj|AK106013.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-206-B04, full insert sequence Length = 1123 Score = 44.1 bits (22), Expect = 0.62 Identities = 40/46 (86%) Strand = Plus / Minus Query: 655 gggtacttctcctcaatgacttgagtaatcacatcagaatcagcaa 700 ||||||||||| || || |||| ||||| |||||||||||||||| Sbjct: 559 gggtacttctcttctatcgcttgtgtaataacatcagaatcagcaa 514
>dbj|AK070471.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023050F24, full insert sequence Length = 1197 Score = 44.1 bits (22), Expect = 0.62 Identities = 40/46 (86%) Strand = Plus / Plus Query: 655 gggtacttctcctcaatgacttgagtaatcacatcagaatcagcaa 700 ||||||||||| || || |||| ||||| |||||||||||||||| Sbjct: 612 gggtacttctcttctatcgcttgtgtaataacatcagaatcagcaa 657
>emb|AL162402.19| Human DNA sequence from clone RP5-1054K23 on chromosome 1p13.3-21.1, complete sequence Length = 80743 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 648 tggagttgggtacttctcctc 668 ||||||||||||||||||||| Sbjct: 18298 tggagttgggtacttctcctc 18278
>gb|AC109221.32| Mus musculus chromosome 7, clone RP23-207N2, complete sequence Length = 195657 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 83 agccaggcagggggcagacag 103 ||||||||||||||||||||| Sbjct: 71257 agccaggcagggggcagacag 71277
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 272 acgggttcaccttcggcgccc 292 ||||||||||||||||||||| Sbjct: 209716 acgggttcaccttcggcgccc 209736
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 311 ccttggtcggcttggtcttg 330 |||||||||||||||||||| Sbjct: 505341 ccttggtcggcttggtcttg 505322
>gb|AC168056.3| Mus musculus BAC clone RP24-189B1 from chromosome 13, complete sequence Length = 179458 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 425 cctggaggtggaagagcttc 444 |||||||||||||||||||| Sbjct: 51516 cctggaggtggaagagcttc 51497
>ref|XM_366481.1| Magnaporthe grisea 70-15 chromosome VII predicted protein (MG02557.4) partial mRNA Length = 966 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 318 cggcttggtcttgacgaacg 337 |||||||||||||||||||| Sbjct: 216 cggcttggtcttgacgaacg 197
>ref|XM_714685.1| Candida albicans SC5314 hypothetical protein (CaO19_14092), mRNA Length = 1569 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 210 tactactgccatcactactggcac 233 ||||||||||| |||||||||||| Sbjct: 1363 tactactgccagcactactggcac 1340
>ref|XM_714802.1| Candida albicans SC5314 hypothetical protein (CaO19_6800), mRNA Length = 1569 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 210 tactactgccatcactactggcac 233 ||||||||||| |||||||||||| Sbjct: 1363 tactactgccagcactactggcac 1340
>gb|AC144402.2| Atelerix albiventris clone LBNL4-89B6, complete sequence Length = 161430 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 caggcagagcacacagcaga 149 |||||||||||||||||||| Sbjct: 111810 caggcagagcacacagcaga 111829
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 296 cggcgatcaggttctccttg 315 |||||||||||||||||||| Sbjct: 3304928 cggcgatcaggttctccttg 3304947
>gb|AC063918.21| Homo sapiens 3 BAC RP11-49C18 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 97001 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 386 tttcagggaccttccagcct 405 |||||||||||||||||||| Sbjct: 18007 tttcagggaccttccagcct 17988
>dbj|AP008934.1| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 DNA, complete genome Length = 2516575 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 683 tcacatcagaatcagcaatc 702 |||||||||||||||||||| Sbjct: 2496718 tcacatcagaatcagcaatc 2496737
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 300 gatcaggttctccttggtcg 319 |||||||||||||||||||| Sbjct: 3814314 gatcaggttctccttggtcg 3814295
>emb|BX088727.14| Zebrafish DNA sequence from clone DKEY-218A22 in linkage group 2, complete sequence Length = 185178 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 156 ctcgcattattccaaaccca 175 |||||||||||||||||||| Sbjct: 28852 ctcgcattattccaaaccca 28833
>emb|Z84494.1|HSLUCA7 Human DNA sequence from clone XXcos-7 on chromosome 3, complete sequence Length = 16950 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 agccaggcagggggcagaca 102 |||||||||||||||||||| Sbjct: 12882 agccaggcagggggcagaca 12863
>emb|AL928663.4| Mouse DNA sequence from clone RP23-315A20 on chromosome 2, complete sequence Length = 94702 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 408 gaagtgctccagggcaacct 427 |||||||||||||||||||| Sbjct: 10457 gaagtgctccagggcaacct 10476 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,392,089 Number of Sequences: 3902068 Number of extensions: 4392089 Number of successful extensions: 84527 Number of sequences better than 10.0: 51 Number of HSP's better than 10.0 without gapping: 51 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 84186 Number of HSP's gapped (non-prelim): 333 length of query: 703 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 680 effective length of database: 17,143,297,704 effective search space: 11657442438720 effective search space used: 11657442438720 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)