Clone Name | rbasd15o08 |
---|---|
Clone Library Name | barley_pub |
>dbj|AK104654.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-C04, full insert sequence Length = 1209 Score = 206 bits (104), Expect = 5e-50 Identities = 218/252 (86%), Gaps = 8/252 (3%) Strand = Plus / Minus Query: 194 aactgtgggcagcaaccgctttagttcttattcttggacttatcccctgcccttggaact 253 ||||||||||| |||| | |||||| | ||||||||||| |||||||| ||||| Sbjct: 850 aactgtgggcaataaccattctagttcctgttcttggacttttcccctgctcttggg--- 794 Query: 254 gcaagtccaactgcatctgaacctttcatgaccctcagccttcggcaagactcggtgaac 313 |||||||||| ||||||||| |||||||||| || ||||| |||||||| ||||||||| Sbjct: 793 gcaagtccaattgcatctgagcctttcatgattctgagcctccggcaagagtcggtgaac 734 Query: 314 atctcccatgggacgtcaccaaccagcatccagtctccgtccttgtcttcgtaggtcagc 373 ||||||||||| || |||||||||||||||||||| || ||||||||||||||||| | | Sbjct: 733 atctcccatggaacatcaccaaccagcatccagtcaccatccttgtcttcgtaggttaac 674 Query: 374 acgtattcaccatcctttct-gttctcagatacaccatctttaccggtgctgaagccaat 432 || |||||||||| |||||| |||||||| |||| || |||||||||||||||||||| Sbjct: 673 acatattcaccat-ctttctggttctcag---caccttccttaccggtgctgaagccaat 618 Query: 433 gaacattttctc 444 |||||||||||| Sbjct: 617 gaacattttctc 606
>dbj|AK072001.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013094L17, full insert sequence Length = 1291 Score = 206 bits (104), Expect = 5e-50 Identities = 218/252 (86%), Gaps = 8/252 (3%) Strand = Plus / Minus Query: 194 aactgtgggcagcaaccgctttagttcttattcttggacttatcccctgcccttggaact 253 ||||||||||| |||| | |||||| | ||||||||||| |||||||| ||||| Sbjct: 947 aactgtgggcaataaccattctagttcctgttcttggacttttcccctgctcttggg--- 891 Query: 254 gcaagtccaactgcatctgaacctttcatgaccctcagccttcggcaagactcggtgaac 313 |||||||||| ||||||||| |||||||||| || ||||| |||||||| ||||||||| Sbjct: 890 gcaagtccaattgcatctgagcctttcatgattctgagcctccggcaagagtcggtgaac 831 Query: 314 atctcccatgggacgtcaccaaccagcatccagtctccgtccttgtcttcgtaggtcagc 373 ||||||||||| || |||||||||||||||||||| || ||||||||||||||||| | | Sbjct: 830 atctcccatggaacatcaccaaccagcatccagtcaccatccttgtcttcgtaggttaac 771 Query: 374 acgtattcaccatcctttct-gttctcagatacaccatctttaccggtgctgaagccaat 432 || |||||||||| |||||| |||||||| |||| || |||||||||||||||||||| Sbjct: 770 acatattcaccat-ctttctggttctcag---caccttccttaccggtgctgaagccaat 715 Query: 433 gaacattttctc 444 |||||||||||| Sbjct: 714 gaacattttctc 703
>dbj|AK066156.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013054L16, full insert sequence Length = 1194 Score = 206 bits (104), Expect = 5e-50 Identities = 218/252 (86%), Gaps = 8/252 (3%) Strand = Plus / Minus Query: 194 aactgtgggcagcaaccgctttagttcttattcttggacttatcccctgcccttggaact 253 ||||||||||| |||| | |||||| | ||||||||||| |||||||| ||||| Sbjct: 898 aactgtgggcaataaccattctagttcctgttcttggacttttcccctgctcttggg--- 842 Query: 254 gcaagtccaactgcatctgaacctttcatgaccctcagccttcggcaagactcggtgaac 313 |||||||||| ||||||||| |||||||||| || ||||| |||||||| ||||||||| Sbjct: 841 gcaagtccaattgcatctgagcctttcatgattctgagcctccggcaagagtcggtgaac 782 Query: 314 atctcccatgggacgtcaccaaccagcatccagtctccgtccttgtcttcgtaggtcagc 373 ||||||||||| || |||||||||||||||||||| || ||||||||||||||||| | | Sbjct: 781 atctcccatggaacatcaccaaccagcatccagtcaccatccttgtcttcgtaggttaac 722 Query: 374 acgtattcaccatcctttct-gttctcagatacaccatctttaccggtgctgaagccaat 432 || |||||||||| |||||| |||||||| |||| || |||||||||||||||||||| Sbjct: 721 acatattcaccat-ctttctggttctcag---caccttccttaccggtgctgaagccaat 666 Query: 433 gaacattttctc 444 |||||||||||| Sbjct: 665 gaacattttctc 654
>ref|NM_188615.1| Oryza sativa (japonica cultivar-group), Ozsa8218 predicted mRNA Length = 846 Score = 204 bits (103), Expect = 2e-49 Identities = 202/231 (87%), Gaps = 8/231 (3%) Strand = Plus / Minus Query: 215 tagttcttattcttggacttatcccctgcccttggaactgcaagtccaactgcatctgaa 274 |||||| | ||||||||||| |||||||| ||||| |||||||||| ||||||||| Sbjct: 845 tagttcctgttcttggacttttcccctgctcttggg---gcaagtccaattgcatctgag 789 Query: 275 cctttcatgaccctcagccttcggcaagactcggtgaacatctcccatgggacgtcacca 334 |||||||||| || ||||| |||||||| |||||||||||||||||||| || |||||| Sbjct: 788 cctttcatgattctgagcctccggcaagagtcggtgaacatctcccatggaacatcacca 729 Query: 335 accagcatccagtctccgtccttgtcttcgtaggtcagcacgtattcaccatcctttct- 393 |||||||||||||| || ||||||||||||||||| | ||| |||||||||| |||||| Sbjct: 728 accagcatccagtcaccatccttgtcttcgtaggttaacacatattcaccat-ctttctg 670 Query: 394 gttctcagatacaccatctttaccggtgctgaagccaatgaacattttctc 444 |||||||| |||| || |||||||||||||||||||||||||||||||| Sbjct: 669 gttctcag---caccttccttaccggtgctgaagccaatgaacattttctc 622
>dbj|AK106192.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-E03, full insert sequence Length = 1249 Score = 159 bits (80), Expect = 1e-35 Identities = 184/218 (84%), Gaps = 3/218 (1%) Strand = Plus / Minus Query: 227 ttggacttatcccctgcccttggaactgcaagtccaactgcatctgaacctttcatgacc 286 ||||||||||| ||||||||||| |||||||||| |||||||||||||||||||| | Sbjct: 866 ttggacttatcaactgcccttgga---gcaagtccaattgcatctgaacctttcatgatc 810 Query: 287 ctcagccttcggcaagactcggtgaacatctcccatgggacgtcaccaaccagcatccag 346 || || || || ||||| | || |||||||||||||| || || ||||| ||||||||| Sbjct: 809 ctgagtctgcgacaagagttggcaaacatctcccatggaacatcgccaacaagcatccag 750 Query: 347 tctccgtccttgtcttcgtaggtcagcacgtattcaccatcctttctgttctcagataca 406 ||||| ||||||||||| || |||||||| |||||||||||||| | | ||||||||| Sbjct: 749 tctccatccttgtcttcataagtcagcacatattcaccatccttgcggctctcagataag 690 Query: 407 ccatctttaccggtgctgaagccaatgaacattttctc 444 ||||| || || || |||||||||||||||| ||||| Sbjct: 689 ccatccttgccagttgtgaagccaatgaacatcttctc 652
>dbj|AK105936.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-B07, full insert sequence Length = 1240 Score = 159 bits (80), Expect = 1e-35 Identities = 184/218 (84%), Gaps = 3/218 (1%) Strand = Plus / Minus Query: 227 ttggacttatcccctgcccttggaactgcaagtccaactgcatctgaacctttcatgacc 286 ||||||||||| ||||||||||| |||||||||| |||||||||||||||||||| | Sbjct: 857 ttggacttatcaactgcccttgga---gcaagtccaattgcatctgaacctttcatgatc 801 Query: 287 ctcagccttcggcaagactcggtgaacatctcccatgggacgtcaccaaccagcatccag 346 || || || || ||||| | || |||||||||||||| || || ||||| ||||||||| Sbjct: 800 ctgagtctgcgacaagagttggcaaacatctcccatggaacatcgccaacaagcatccag 741 Query: 347 tctccgtccttgtcttcgtaggtcagcacgtattcaccatcctttctgttctcagataca 406 ||||| ||||||||||| || |||||||| |||||||||||||| | | ||||||||| Sbjct: 740 tctccatccttgtcttcataagtcagcacatattcaccatccttgcggctctcagataag 681 Query: 407 ccatctttaccggtgctgaagccaatgaacattttctc 444 ||||| || || || |||||||||||||||| ||||| Sbjct: 680 ccatccttgccagttgtgaagccaatgaacatcttctc 643
>dbj|AK102762.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033107D08, full insert sequence Length = 1150 Score = 159 bits (80), Expect = 1e-35 Identities = 184/218 (84%), Gaps = 3/218 (1%) Strand = Plus / Minus Query: 227 ttggacttatcccctgcccttggaactgcaagtccaactgcatctgaacctttcatgacc 286 ||||||||||| ||||||||||| |||||||||| |||||||||||||||||||| | Sbjct: 837 ttggacttatcaactgcccttgga---gcaagtccaattgcatctgaacctttcatgatc 781 Query: 287 ctcagccttcggcaagactcggtgaacatctcccatgggacgtcaccaaccagcatccag 346 || || || || ||||| | || |||||||||||||| || || ||||| ||||||||| Sbjct: 780 ctgagtctgcgacaagagttggcaaacatctcccatggaacatcgccaacaagcatccag 721 Query: 347 tctccgtccttgtcttcgtaggtcagcacgtattcaccatcctttctgttctcagataca 406 ||||| ||||||||||| || |||||||| |||||||||||||| | | ||||||||| Sbjct: 720 tctccatccttgtcttcataagtcagcacatattcaccatccttgcggctctcagataag 661 Query: 407 ccatctttaccggtgctgaagccaatgaacattttctc 444 ||||| || || || |||||||||||||||| ||||| Sbjct: 660 ccatccttgccagttgtgaagccaatgaacatcttctc 623
>dbj|AK069902.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023034K17, full insert sequence Length = 1306 Score = 143 bits (72), Expect = 6e-31 Identities = 152/178 (85%), Gaps = 3/178 (1%) Strand = Plus / Minus Query: 227 ttggacttatcccctgcccttggaactgcaagtccaactgcatctgaacctttcatgacc 286 ||||||||||| ||||||||||| |||||||||| |||||||||||||||||||| | Sbjct: 923 ttggacttatcaactgcccttgga---gcaagtccaattgcatctgaacctttcatgatc 867 Query: 287 ctcagccttcggcaagactcggtgaacatctcccatgggacgtcaccaaccagcatccag 346 || || || || ||||| | || |||||||||||||| || || ||||| ||||||||| Sbjct: 866 ctgagtctgcgacaagagttggcaaacatctcccatggaacatcgccaacaagcatccag 807 Query: 347 tctccgtccttgtcttcgtaggtcagcacgtattcaccatcctttctgttctcagata 404 ||||| ||||||||||| || |||||||| |||||||||||||| | | ||||||||| Sbjct: 806 tctccatccttgtcttcataagtcagcacatattcaccatccttgcggctctcagata 749
>gb|AC145477.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1402B06, complete sequence Length = 134001 Score = 89.7 bits (45), Expect = 7e-15 Identities = 78/89 (87%) Strand = Plus / Minus Query: 316 ctcccatgggacgtcaccaaccagcatccagtctccgtccttgtcttcgtaggtcagcac 375 ||||||||| || || ||||| |||||||||||||| ||||||||||| || |||||||| Sbjct: 130362 ctcccatggaacatcgccaacaagcatccagtctccatccttgtcttcataagtcagcac 130303 Query: 376 gtattcaccatcctttctgttctcagata 404 |||||||||||||| | | ||||||||| Sbjct: 130302 atattcaccatccttgcggctctcagata 130274 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 255 caagtccaactgcatctgaacctttcatga 284 ||||||||| |||||||||||||||||||| Sbjct: 130535 caagtccaattgcatctgaacctttcatga 130506
>gb|AC145396.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0042F15, complete sequence Length = 162959 Score = 89.7 bits (45), Expect = 7e-15 Identities = 78/89 (87%) Strand = Plus / Minus Query: 316 ctcccatgggacgtcaccaaccagcatccagtctccgtccttgtcttcgtaggtcagcac 375 ||||||||| || || ||||| |||||||||||||| ||||||||||| || |||||||| Sbjct: 37551 ctcccatggaacatcgccaacaagcatccagtctccatccttgtcttcataagtcagcac 37492 Query: 376 gtattcaccatcctttctgttctcagata 404 |||||||||||||| | | ||||||||| Sbjct: 37491 atattcaccatccttgcggctctcagata 37463 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 255 caagtccaactgcatctgaacctttcatga 284 ||||||||| |||||||||||||||||||| Sbjct: 37724 caagtccaattgcatctgaacctttcatga 37695
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 89.7 bits (45), Expect = 7e-15 Identities = 78/89 (87%) Strand = Plus / Minus Query: 316 ctcccatgggacgtcaccaaccagcatccagtctccgtccttgtcttcgtaggtcagcac 375 ||||||||| || || ||||| |||||||||||||| ||||||||||| || |||||||| Sbjct: 7852776 ctcccatggaacatcgccaacaagcatccagtctccatccttgtcttcataagtcagcac 7852717 Query: 376 gtattcaccatcctttctgttctcagata 404 |||||||||||||| | | ||||||||| Sbjct: 7852716 atattcaccatccttgcggctctcagata 7852688 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 323 gggacgtcaccaaccagcatccagtctccgtccttgtcttcgtaggtcagcacgta 378 |||||||| || || ||||||||||| ||||||||||| ||||| ||| ||||||| Sbjct: 4624577 gggacgtctccgacgagcatccagtcgccgtccttgtcctcgtacgtcggcacgta 4624632 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 255 caagtccaactgcatctgaacctttcatga 284 ||||||||| |||||||||||||||||||| Sbjct: 7852949 caagtccaattgcatctgaacctttcatga 7852920 Score = 42.1 bits (21), Expect = 1.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 329 tcaccaaccagcatccagtctccgtccttgtcttcgtaggt 369 |||||||| ||||||||||| | ||||||||||| ||||| Sbjct: 27627747 tcaccaacaagcatccagtcagcatccttgtcttcataggt 27627787
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 87.7 bits (44), Expect = 3e-14 Identities = 65/72 (90%) Strand = Plus / Minus Query: 316 ctcccatgggacgtcaccaaccagcatccagtctccgtccttgtcttcgtaggtcagcac 375 ||||||||| || |||||||||||||||||||| || ||||||||||||||||| | ||| Sbjct: 7251225 ctcccatggaacatcaccaaccagcatccagtcaccatccttgtcttcgtaggttaacac 7251166 Query: 376 gtattcaccatc 387 ||||||||||| Sbjct: 7251165 atattcaccatc 7251154 Score = 67.9 bits (34), Expect = 3e-08 Identities = 49/54 (90%) Strand = Plus / Minus Query: 316 ctcccatgggacgtcaccaaccagcatccagtctccgtccttgtcttcgtaggt 369 ||||||||||||||| ||||||| ||||||||| ||||||| |||||| ||||| Sbjct: 10312454 ctcccatgggacgtccccaaccatcatccagtccccgtcctggtcttcataggt 10312401 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Minus Query: 255 caagtccaactgcatctgaacctttcatgaccctcagccttcggcaagactcggtgaaca 314 ||||||||| ||||||||| |||||||||| || ||||| |||||||| |||||||||| Sbjct: 7251406 caagtccaattgcatctgagcctttcatgattctgagcctccggcaagagtcggtgaaca 7251347 Query: 315 tc 316 || Sbjct: 7251346 tc 7251345 Score = 60.0 bits (30), Expect = 7e-06 Identities = 30/30 (100%) Strand = Plus / Minus Query: 415 accggtgctgaagccaatgaacattttctc 444 |||||||||||||||||||||||||||||| Sbjct: 7250276 accggtgctgaagccaatgaacattttctc 7250247 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 323 gggacgtcaccaaccagcatccagtctccgtccttgtcttcgtaggtcagcacgta 378 |||||||| || || ||||||||||| ||||||||||| ||||| ||| ||||||| Sbjct: 4074630 gggacgtcgccgacgagcatccagtcgccgtccttgtcctcgtacgtcggcacgta 4074685 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 319 ccatgggacgtcaccaaccagcatccagtctcc 351 |||||| ||||| ||||||||||||| |||||| Sbjct: 30971862 ccatggcacgtccccaaccagcatcctgtctcc 30971830 Score = 40.1 bits (20), Expect = 6.1 Identities = 47/56 (83%) Strand = Plus / Minus Query: 194 aactgtgggcagcaaccgctttagttcttattcttggacttatcccctgcccttgg 249 ||||||||||| |||| | |||||| | ||||||||||| |||||||| ||||| Sbjct: 7252344 aactgtgggcaataaccattctagttcctgttcttggacttttcccctgctcttgg 7252289
>dbj|AP001859.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0485D09 Length = 150594 Score = 87.7 bits (44), Expect = 3e-14 Identities = 65/72 (90%) Strand = Plus / Minus Query: 316 ctcccatgggacgtcaccaaccagcatccagtctccgtccttgtcttcgtaggtcagcac 375 ||||||||| || |||||||||||||||||||| || ||||||||||||||||| | ||| Sbjct: 145873 ctcccatggaacatcaccaaccagcatccagtcaccatccttgtcttcgtaggttaacac 145814 Query: 376 gtattcaccatc 387 ||||||||||| Sbjct: 145813 atattcaccatc 145802 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Minus Query: 255 caagtccaactgcatctgaacctttcatgaccctcagccttcggcaagactcggtgaaca 314 ||||||||| ||||||||| |||||||||| || ||||| |||||||| |||||||||| Sbjct: 146054 caagtccaattgcatctgagcctttcatgattctgagcctccggcaagagtcggtgaaca 145995 Query: 315 tc 316 || Sbjct: 145994 tc 145993 Score = 60.0 bits (30), Expect = 7e-06 Identities = 30/30 (100%) Strand = Plus / Minus Query: 415 accggtgctgaagccaatgaacattttctc 444 |||||||||||||||||||||||||||||| Sbjct: 144924 accggtgctgaagccaatgaacattttctc 144895 Score = 40.1 bits (20), Expect = 6.1 Identities = 47/56 (83%) Strand = Plus / Minus Query: 194 aactgtgggcagcaaccgctttagttcttattcttggacttatcccctgcccttgg 249 ||||||||||| |||| | |||||| | ||||||||||| |||||||| ||||| Sbjct: 146992 aactgtgggcaataaccattctagttcctgttcttggacttttcccctgctcttgg 146937
>dbj|AP001550.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0431F01 Length = 143209 Score = 87.7 bits (44), Expect = 3e-14 Identities = 65/72 (90%) Strand = Plus / Minus Query: 316 ctcccatgggacgtcaccaaccagcatccagtctccgtccttgtcttcgtaggtcagcac 375 ||||||||| || |||||||||||||||||||| || ||||||||||||||||| | ||| Sbjct: 52655 ctcccatggaacatcaccaaccagcatccagtcaccatccttgtcttcgtaggttaacac 52596 Query: 376 gtattcaccatc 387 ||||||||||| Sbjct: 52595 atattcaccatc 52584 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Minus Query: 255 caagtccaactgcatctgaacctttcatgaccctcagccttcggcaagactcggtgaaca 314 ||||||||| ||||||||| |||||||||| || ||||| |||||||| |||||||||| Sbjct: 52836 caagtccaattgcatctgagcctttcatgattctgagcctccggcaagagtcggtgaaca 52777 Query: 315 tc 316 || Sbjct: 52776 tc 52775 Score = 60.0 bits (30), Expect = 7e-06 Identities = 30/30 (100%) Strand = Plus / Minus Query: 415 accggtgctgaagccaatgaacattttctc 444 |||||||||||||||||||||||||||||| Sbjct: 51706 accggtgctgaagccaatgaacattttctc 51677 Score = 40.1 bits (20), Expect = 6.1 Identities = 47/56 (83%) Strand = Plus / Minus Query: 194 aactgtgggcagcaaccgctttagttcttattcttggacttatcccctgcccttgg 249 ||||||||||| |||| | |||||| | ||||||||||| |||||||| ||||| Sbjct: 53774 aactgtgggcaataaccattctagttcctgttcttggacttttcccctgctcttgg 53719
>emb|AJ575098.1|TAE575098 Triticum aestivum partial mRNA for IAA1 protein Length = 1104 Score = 87.7 bits (44), Expect = 3e-14 Identities = 53/56 (94%) Strand = Plus / Minus Query: 311 aacatctcccatgggacgtcaccaaccagcatccagtctccgtccttgtcttcgta 366 |||||||||||||||||||| ||||| |||||||||||||| |||||||||||||| Sbjct: 684 aacatctcccatgggacgtctccaacaagcatccagtctccatccttgtcttcgta 629
>gb|BT013567.1| Lycopersicon esculentum clone 132305F, mRNA sequence Length = 1626 Score = 81.8 bits (41), Expect = 2e-12 Identities = 86/101 (85%) Strand = Plus / Minus Query: 266 gcatctgaacctttcatgaccctcagccttcggcaagactcggtgaacatctcccatggg 325 ||||||||||||||||||| ||||| |||| ||||| ||| | ||||||||||| ||| Sbjct: 1236 gcatctgaacctttcatgatcctcaaccttttgcaagtatcgataaacatctcccagggg 1177 Query: 326 acgtcaccaaccagcatccagtctccgtccttgtcttcgta 366 || ||||| || ||||||||||| || ||||| |||||||| Sbjct: 1176 acatcaccgacaagcatccagtccccatccttatcttcgta 1136
>emb|AJ937282.1| Lycopersicon esculentum partial mRNA for Aux/IAA protein (iaa9 gene) Length = 1752 Score = 81.8 bits (41), Expect = 2e-12 Identities = 86/101 (85%) Strand = Plus / Minus Query: 266 gcatctgaacctttcatgaccctcagccttcggcaagactcggtgaacatctcccatggg 325 ||||||||||||||||||| ||||| |||| ||||| ||| | ||||||||||| ||| Sbjct: 1235 gcatctgaacctttcatgatcctcaaccttttgcaagtatcgataaacatctcccagggg 1176 Query: 326 acgtcaccaaccagcatccagtctccgtccttgtcttcgta 366 || ||||| || ||||||||||| || ||||| |||||||| Sbjct: 1175 acatcaccgacaagcatccagtccccatccttatcttcgta 1135
>gb|DQ115325.1| Lycopersicon esculentum AUX/IAA protein (IAA4) mRNA, complete cds Length = 1707 Score = 81.8 bits (41), Expect = 2e-12 Identities = 86/101 (85%) Strand = Plus / Minus Query: 266 gcatctgaacctttcatgaccctcagccttcggcaagactcggtgaacatctcccatggg 325 ||||||||||||||||||| ||||| |||| ||||| ||| | ||||||||||| ||| Sbjct: 1236 gcatctgaacctttcatgatcctcaaccttttgcaagtatcgataaacatctcccagggg 1177 Query: 326 acgtcaccaaccagcatccagtctccgtccttgtcttcgta 366 || ||||| || ||||||||||| || ||||| |||||||| Sbjct: 1176 acatcaccgacaagcatccagtccccatccttatcttcgta 1136
>dbj|AK068213.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013149K13, full insert sequence Length = 1545 Score = 79.8 bits (40), Expect = 7e-12 Identities = 64/72 (88%) Strand = Plus / Minus Query: 311 aacatctcccatgggacgtcaccaaccagcatccagtctccgtccttgtcttcgtaggtc 370 |||||||||||||||||||| || || ||||||||||| ||||||||||| |||||||| Sbjct: 992 aacatctcccatgggacgtcgccgacgagcatccagtcgccgtccttgtcctcgtaggtt 933 Query: 371 agcacgtattca 382 |||| |||||| Sbjct: 932 ggcacatattca 921
>ref|XM_468970.1| Oryza sativa (japonica cultivar-group), mRNA Length = 707 Score = 73.8 bits (37), Expect = 4e-10 Identities = 61/69 (88%) Strand = Plus / Minus Query: 310 gaacatctcccatgggacgtcaccaaccagcatccagtctccgtccttgtcttcgtaggt 369 |||||||||||| |||||||| || || ||||||||||| ||||||||||| ||||| || Sbjct: 620 gaacatctcccacgggacgtcgccgacgagcatccagtcgccgtccttgtcctcgtacgt 561 Query: 370 cagcacgta 378 | ||||||| Sbjct: 560 cggcacgta 552
>emb|AJ843999.1| Plantago major mRNA for auxin resistance protein (axr2 gene) Length = 1195 Score = 73.8 bits (37), Expect = 4e-10 Identities = 49/53 (92%) Strand = Plus / Minus Query: 311 aacatctcccatgggacgtcaccaaccagcatccagtctccgtccttgtcttc 363 |||||||||||||||||||||||||| ||||||||||| || ||||| ||||| Sbjct: 743 aacatctcccatgggacgtcaccaacaagcatccagtcaccatccttatcttc 691
>gb|AY103603.1| Zea mays PCO094169 mRNA sequence Length = 1576 Score = 73.8 bits (37), Expect = 4e-10 Identities = 106/129 (82%) Strand = Plus / Minus Query: 316 ctcccatgggacgtcaccaaccagcatccagtctccgtccttgtcttcgtaggtcagcac 375 ||||||||| ||||| || || |||||||| ||||| |||||||| ||||| ||||| || Sbjct: 642 ctcccatggtacgtcgccgacaagcatccaatctccatccttgtcctcgtaagtcagaac 583 Query: 376 gtattcaccatcctttctgttctcagatacaccatctttaccggtgctgaagccaatgaa 435 |||||||||||||| | || ||||||| || || || || || ||||||||| |||| Sbjct: 582 atattcaccatccttgcggtactcagatgagccgtccttgccagtactgaagccactgaa 523 Query: 436 cattttctc 444 ||| ||||| Sbjct: 522 catcttctc 514
>gb|AY137964.1| Mirabilis jalapa clone MSR-193 Aux/IAA4 mRNA, partial cds Length = 157 Score = 71.9 bits (36), Expect = 2e-09 Identities = 96/116 (82%) Strand = Plus / Minus Query: 260 ccaactgcatctgaacctttcatgaccctcagccttcggcaagactcggtgaacatctcc 319 |||| |||||| |||| |||||||| | ||| ||| |||||| || ||||||||||| Sbjct: 119 ccaattgcatcagaacttttcatgatcttcaacctcttgcaagaatcaatgaacatctcc 60 Query: 320 catgggacgtcaccaaccagcatccagtctccgtccttgtcttcgtaggtcagcac 375 || ||||| || ||||| ||||||||||| || |||||||| || ||||||||||| Sbjct: 59 caggggacatctccaacaagcatccagtcgccatccttgtcctcataggtcagcac 4
>gb|AF123508.1|AF123508 Nicotiana tabacum Nt-iaa28 deduced protein mRNA, complete cds Length = 943 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Minus Query: 311 aacatctcccatgggacgtcaccaaccagcatccagtctccgtccttgtcttcgta 366 ||||||||||| || || |||||||| |||||||||||||| |||||||||||||| Sbjct: 689 aacatctcccaaggtacatcaccaacaagcatccagtctccatccttgtcttcgta 634
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 69.9 bits (35), Expect = 7e-09 Identities = 59/67 (88%) Strand = Plus / Plus Query: 316 ctcccatgggacgtcaccaaccagcatccagtctccgtccttgtcttcgtaggtcagcac 375 ||||||||||||||| || || ||||||||||| ||||||||||| |||||||| |||| Sbjct: 25345350 ctcccatgggacgtcgccgacgagcatccagtcgccgtccttgtcctcgtaggttggcac 25345409 Query: 376 gtattca 382 |||||| Sbjct: 25345410 atattca 25345416 Score = 60.0 bits (30), Expect = 7e-06 Identities = 30/30 (100%) Strand = Plus / Plus Query: 415 accggtgctgaagccaatgaacattttctc 444 |||||||||||||||||||||||||||||| Sbjct: 17852965 accggtgctgaagccaatgaacattttctc 17852994
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 69.9 bits (35), Expect = 7e-09 Identities = 59/67 (88%) Strand = Plus / Plus Query: 316 ctcccatgggacgtcaccaaccagcatccagtctccgtccttgtcttcgtaggtcagcac 375 ||||||||||||||| || || ||||||||||| ||||||||||| |||||||| |||| Sbjct: 25273526 ctcccatgggacgtcgccgacgagcatccagtcgccgtccttgtcctcgtaggttggcac 25273585 Query: 376 gtattca 382 |||||| Sbjct: 25273586 atattca 25273592 Score = 60.0 bits (30), Expect = 7e-06 Identities = 30/30 (100%) Strand = Plus / Plus Query: 415 accggtgctgaagccaatgaacattttctc 444 |||||||||||||||||||||||||||||| Sbjct: 17779284 accggtgctgaagccaatgaacattttctc 17779313
>emb|AL837528.5|CNS08CAR Oryza sativa chromosome 12, . BAC OSJNBb0062H20 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 152914 Score = 69.9 bits (35), Expect = 7e-09 Identities = 59/67 (88%) Strand = Plus / Plus Query: 316 ctcccatgggacgtcaccaaccagcatccagtctccgtccttgtcttcgtaggtcagcac 375 ||||||||||||||| || || ||||||||||| ||||||||||| |||||||| |||| Sbjct: 12160 ctcccatgggacgtcgccgacgagcatccagtcgccgtccttgtcctcgtaggttggcac 12219 Query: 376 gtattca 382 |||||| Sbjct: 12220 atattca 12226
>ref|NM_183562.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 570 Score = 67.9 bits (34), Expect = 3e-08 Identities = 49/54 (90%) Strand = Plus / Minus Query: 316 ctcccatgggacgtcaccaaccagcatccagtctccgtccttgtcttcgtaggt 369 ||||||||||||||| ||||||| ||||||||| ||||||| |||||| ||||| Sbjct: 558 ctcccatgggacgtccccaaccatcatccagtccccgtcctggtcttcataggt 505
>gb|AY962829.1| Prunus armeniaca auxin-induced protein mRNA, partial cds Length = 364 Score = 67.9 bits (34), Expect = 3e-08 Identities = 73/86 (84%) Strand = Plus / Minus Query: 278 ttcatgaccctcagccttcggcaagactcggtgaacatctcccatgggacgtcaccaacc 337 ||||||| ||||||||| ||| ||||| || ||||||||||| |||||||| || || Sbjct: 179 ttcatgatcctcagcctcttgcatgactcagtaaacatctcccaagggacgtctcccact 120 Query: 338 agcatccagtctccgtccttgtcttc 363 |||||||||||||| || |||||||| Sbjct: 119 agcatccagtctccatctttgtcttc 94
>dbj|AP002070.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0511C01 Length = 170402 Score = 67.9 bits (34), Expect = 3e-08 Identities = 49/54 (90%) Strand = Plus / Minus Query: 316 ctcccatgggacgtcaccaaccagcatccagtctccgtccttgtcttcgtaggt 369 ||||||||||||||| ||||||| ||||||||| ||||||| |||||| ||||| Sbjct: 19174 ctcccatgggacgtccccaaccatcatccagtccccgtcctggtcttcataggt 19121
>gb|AY781902.1| Saccharum hybrid cultivar isolate c57 auxin-induced protein mRNA, partial cds Length = 1046 Score = 65.9 bits (33), Expect = 1e-07 Identities = 60/69 (86%) Strand = Plus / Minus Query: 310 gaacatctcccatgggacgtcaccaaccagcatccagtctccgtccttgtcttcgtaggt 369 |||||||||||| || ||||| || || ||||||||||| || |||||||| |||||||| Sbjct: 476 gaacatctcccacggcacgtcgccgacgagcatccagtcgccctccttgtcctcgtaggt 417 Query: 370 cagcacgta 378 | ||||||| Sbjct: 416 cggcacgta 408
>emb|AM040278.1| Capsicum chinense mRNA for auxin induced protein (aux/iaa gene) Length = 1778 Score = 65.9 bits (33), Expect = 1e-07 Identities = 96/117 (82%) Strand = Plus / Minus Query: 266 gcatctgaacctttcatgaccctcagccttcggcaagactcggtgaacatctcccatggg 325 ||||||||||||||||||| ||||||||| ||| | || | ||||||||||| ||| Sbjct: 1267 gcatctgaacctttcatgatcctcagcctcttgcaggtatcaataaacatctcccagggg 1208 Query: 326 acgtcaccaaccagcatccagtctccgtccttgtcttcgtaggtcagcacgtattca 382 || ||||| || ||||||||||| || ||||| || ||||| || || ||||||||| Sbjct: 1207 acatcaccgactagcatccagtccccatccttatcctcgtacgtgagtacgtattca 1151
>emb|AJ627255.1| Oryza sativa (indica cultivar-group) partial mRNA for putative IAA20 transcriptional repressor (putative IAA20 gene) Length = 561 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 317 tcccatgggacgtcaccaaccagcatccagtctccgtccttgtcttcgtaggt 369 |||||||||||||| ||||||| ||||||||| ||||||| |||||| ||||| Sbjct: 514 tcccatgggacgtccccaaccatcatccagtccccgtcctggtcttcataggt 462
>dbj|AK103865.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033149F09, full insert sequence Length = 860 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 317 tcccatgggacgtcaccaaccagcatccagtctccgtccttgtcttcgtaggt 369 |||||||||||||| ||||||| ||||||||| ||||||| |||||| ||||| Sbjct: 500 tcccatgggacgtccccaaccatcatccagtccccgtcctggtcttcataggt 448
>dbj|AK069376.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023012K19, full insert sequence Length = 1230 Score = 65.9 bits (33), Expect = 1e-07 Identities = 60/69 (86%) Strand = Plus / Minus Query: 310 gaacatctcccatgggacgtcaccaaccagcatccagtctccgtccttgtcttcgtaggt 369 |||||||| ||| |||||||| || || ||||||||||| ||||||||||| |||||||| Sbjct: 624 gaacatcttccaggggacgtcgccgacgagcatccagtcgccgtccttgtcctcgtaggt 565 Query: 370 cagcacgta 378 ||||||| Sbjct: 564 gggcacgta 556
>gb|AY103836.1| Zea mays PCO135053 mRNA sequence Length = 1519 Score = 65.9 bits (33), Expect = 1e-07 Identities = 60/69 (86%) Strand = Plus / Minus Query: 310 gaacatctcccatgggacgtcaccaaccagcatccagtctccgtccttgtcttcgtaggt 369 |||||||||||| || || || || || ||||||||||| ||||||||||| |||||||| Sbjct: 903 gaacatctcccacggcacatcgccgacgagcatccagtccccgtccttgtcctcgtaggt 844 Query: 370 cagcacgta 378 | ||||||| Sbjct: 843 cggcacgta 835
>ref|XM_550382.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1054 Score = 63.9 bits (32), Expect = 4e-07 Identities = 59/68 (86%) Strand = Plus / Minus Query: 311 aacatctcccatgggacgtcaccaaccagcatccagtctccgtccttgtcttcgtaggtc 370 ||||||| ||| |||||||| || || ||||||||||| ||||||||||| ||||| ||| Sbjct: 645 aacatcttccaggggacgtcgccgacgagcatccagtcgccgtccttgtcctcgtacgtc 586 Query: 371 agcacgta 378 ||||||| Sbjct: 585 ggcacgta 578
>dbj|AK109373.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-208-G03, full insert sequence Length = 1118 Score = 63.9 bits (32), Expect = 4e-07 Identities = 59/68 (86%) Strand = Plus / Minus Query: 311 aacatctcccatgggacgtcaccaaccagcatccagtctccgtccttgtcttcgtaggtc 370 ||||||| ||| |||||||| || || ||||||||||| ||||||||||| ||||| ||| Sbjct: 645 aacatcttccaggggacgtcgccgacgagcatccagtcgccgtccttgtcctcgtacgtc 586 Query: 371 agcacgta 378 ||||||| Sbjct: 585 ggcacgta 578
>dbj|AK100800.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023121G17, full insert sequence Length = 1078 Score = 63.9 bits (32), Expect = 4e-07 Identities = 59/68 (86%) Strand = Plus / Minus Query: 311 aacatctcccatgggacgtcaccaaccagcatccagtctccgtccttgtcttcgtaggtc 370 ||||||| ||| |||||||| || || ||||||||||| ||||||||||| ||||| ||| Sbjct: 647 aacatcttccaggggacgtcgccgacgagcatccagtcgccgtccttgtcctcgtacgtc 588 Query: 371 agcacgta 378 ||||||| Sbjct: 587 ggcacgta 580
>dbj|AK069242.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023010B20, full insert sequence Length = 1089 Score = 63.9 bits (32), Expect = 4e-07 Identities = 59/68 (86%) Strand = Plus / Minus Query: 311 aacatctcccatgggacgtcaccaaccagcatccagtctccgtccttgtcttcgtaggtc 370 ||||||| ||| |||||||| || || ||||||||||| ||||||||||| ||||| ||| Sbjct: 637 aacatcttccaggggacgtcgccgacgagcatccagtcgccgtccttgtcctcgtacgtc 578 Query: 371 agcacgta 378 ||||||| Sbjct: 577 ggcacgta 570
>dbj|AK060091.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-D01, full insert sequence Length = 1054 Score = 63.9 bits (32), Expect = 4e-07 Identities = 59/68 (86%) Strand = Plus / Minus Query: 311 aacatctcccatgggacgtcaccaaccagcatccagtctccgtccttgtcttcgtaggtc 370 ||||||| ||| |||||||| || || ||||||||||| ||||||||||| ||||| ||| Sbjct: 645 aacatcttccaggggacgtcgccgacgagcatccagtcgccgtccttgtcctcgtacgtc 586 Query: 371 agcacgta 378 ||||||| Sbjct: 585 ggcacgta 578
>gb|AF123509.1|AF123509 Nicotiana tabacum Nt-iaa4.1 deduced protein mRNA, complete cds Length = 884 Score = 63.9 bits (32), Expect = 4e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 311 aacatctcccatgggacgtcaccaaccagcatccagtctccgtccttgtcttcgta 366 ||||||||||| || || |||||||| |||||||||||||| || ||||||||||| Sbjct: 647 aacatctcccaaggtacatcaccaacaagcatccagtctccatctttgtcttcgta 592
>dbj|AB051384.1| Cucumis sativus mRNA, putative member of Aux/IAA gene family, partial cds Length = 375 Score = 63.9 bits (32), Expect = 4e-07 Identities = 62/72 (86%) Strand = Plus / Minus Query: 302 gactcggtgaacatctcccatgggacgtcaccaaccagcatccagtctccgtccttgtct 361 ||||| |||||||||||||| ||||| |||||||| |||||||| ||||| || || ||| Sbjct: 72 gactccgtgaacatctcccaagggacatcaccaacaagcatccaatctccatctttatct 13 Query: 362 tcgtaggtcagc 373 || |||||||| Sbjct: 12 tcacaggtcagc 1
>ref|XM_467542.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1006 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Minus Query: 310 gaacatctcccatgggacgtcaccaaccagcatccagtctccgtccttgtcttcgtaggt 369 ||||| ||||||||| ||||| ||| ||| |||||||||||| |||| ||||||||| || Sbjct: 656 gaacagctcccatggcacgtctccagccatcatccagtctccctcctggtcttcgtatgt 597 Query: 370 cag 372 ||| Sbjct: 596 cag 594
>gb|AC145780.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0069P02 map near S13580, complete sequence Length = 88044 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Minus Query: 316 ctcccatgggacgtcaccaaccagcatccagtctccgtccttgtcttcgtaggtcagcac 375 |||||| |||||||| || || ||||||||||| ||||||||||| ||||| ||| |||| Sbjct: 5741 ctcccacgggacgtcgccgacgagcatccagtcgccgtccttgtcctcgtacgtcggcac 5682 Query: 376 gta 378 ||| Sbjct: 5681 gta 5679
>gb|DQ191055.1| Glycine max clone DD7.2 SP-5 mRNA, complete cds Length = 478 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 311 aacatctcccatgggacgtcaccaaccagcatccagtctccgtccttgtcttcgtaggt 369 ||||||||||||||||| ||||| || ||||||||||| || |||||||| || ||||| Sbjct: 293 aacatctcccatgggacatcaccgacaagcatccagtcaccatccttgtcctcataggt 235
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 316 ctcccatgggacgtcaccaaccagcatccagtctccgtccttgtcttcgtaggtcagcac 375 |||||| |||||||| || || ||||||||||| ||||||||||| ||||| ||| |||| Sbjct: 24085715 ctcccacgggacgtcgccgacgagcatccagtcgccgtccttgtcctcgtacgtcggcac 24085774 Query: 376 gta 378 ||| Sbjct: 24085775 gta 24085777 Score = 42.1 bits (21), Expect = 1.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 323 gggacgtcaccaaccagcatccagtctccgtccttgtcttc 363 ||||| || ||||| ||||||||||| || ||||||||||| Sbjct: 30188868 gggacatctccaacaagcatccagtcaccatccttgtcttc 30188908
>gb|AC145379.2| Oryza sativa chromosome 3 BAC OSJNBa0010N03 genomic sequence, complete sequence Length = 140980 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Minus Query: 316 ctcccatgggacgtcaccaaccagcatccagtctccgtccttgtcttcgtaggtcagcac 375 |||||| |||||||| || || ||||||||||| ||||||||||| ||||| ||| |||| Sbjct: 136841 ctcccacgggacgtcgccgacgagcatccagtcgccgtccttgtcctcgtacgtcggcac 136782 Query: 376 gta 378 ||| Sbjct: 136781 gta 136779
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 316 ctcccatgggacgtcaccaaccagcatccagtctccgtccttgtcttcgtaggtcagcac 375 |||||| |||||||| || || ||||||||||| ||||||||||| ||||| ||| |||| Sbjct: 24003184 ctcccacgggacgtcgccgacgagcatccagtcgccgtccttgtcctcgtacgtcggcac 24003243 Query: 376 gta 378 ||| Sbjct: 24003244 gta 24003246 Score = 42.1 bits (21), Expect = 1.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 323 gggacgtcaccaaccagcatccagtctccgtccttgtcttc 363 ||||| || ||||| ||||||||||| || ||||||||||| Sbjct: 30280290 gggacatctccaacaagcatccagtcaccatccttgtcttc 30280330
>dbj|AK066518.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013070M23, full insert sequence Length = 1006 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Minus Query: 310 gaacatctcccatgggacgtcaccaaccagcatccagtctccgtccttgtcttcgtaggt 369 ||||| ||||||||| ||||| ||| ||| |||||||||||| |||| ||||||||| || Sbjct: 656 gaacagctcccatggcacgtctccagccatcatccagtctccctcctggtcttcgtatgt 597 Query: 370 cag 372 ||| Sbjct: 596 cag 594
>gb|J03919.1|SOYAUX28 Soybean auxin-regulated protein (Aux28) mRNA, complete cds Length = 1784 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 311 aacatctcccatgggacgtcaccaaccagcatccagtctccgtccttgtcttcgtaggt 369 ||||||||||||||||| ||||| || ||||||||||| || |||||||| || ||||| Sbjct: 1143 aacatctcccatgggacatcaccgacaagcatccagtcaccatccttgtcctcataggt 1085
>gb|AC158504.10| Medicago truncatula clone mth2-151m4, complete sequence Length = 117136 Score = 60.0 bits (30), Expect = 7e-06 Identities = 57/66 (86%) Strand = Plus / Plus Query: 316 ctcccatgggacgtcaccaaccagcatccagtctccgtccttgtcttcgtaggtcagcac 375 ||||||||| || |||||||| |||||||| || || ||||||||||| ||||| ||||| Sbjct: 95752 ctcccatggaacatcaccaactagcatccaatcaccatccttgtcttcataggtaagcac 95811 Query: 376 gtattc 381 ||||| Sbjct: 95812 atattc 95817
>dbj|AB026822.1| Cucumis sativus CsIAA2 mRNA for Aux/IAA protein, complete cds Length = 1646 Score = 60.0 bits (30), Expect = 7e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 299 caagactcggtgaacatctcccatgggacgtcaccaaccagcatccagtc 348 ||||| ||| ||||||||||||| ||||| |||||||| ||||||||||| Sbjct: 1218 caagagtcgatgaacatctcccaagggacatcaccaacgagcatccagtc 1169
>emb|AL928744.3|CNS08CBH Oryza sativa chromosome 12, . BAC OSJNBa0041B10 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 147543 Score = 60.0 bits (30), Expect = 7e-06 Identities = 30/30 (100%) Strand = Plus / Minus Query: 415 accggtgctgaagccaatgaacattttctc 444 |||||||||||||||||||||||||||||| Sbjct: 145541 accggtgctgaagccaatgaacattttctc 145512
>emb|AL731787.3|CNS08C8B Oryza sativa chromosome 12, . BAC OSJNBb0014C10 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 142246 Score = 60.0 bits (30), Expect = 7e-06 Identities = 30/30 (100%) Strand = Plus / Plus Query: 415 accggtgctgaagccaatgaacattttctc 444 |||||||||||||||||||||||||||||| Sbjct: 72163 accggtgctgaagccaatgaacattttctc 72192
>gb|DQ252491.1| Solanum tuberosum clone 060E03 Aux/IAA protein-like mRNA, complete cds Length = 1590 Score = 60.0 bits (30), Expect = 7e-06 Identities = 81/98 (82%) Strand = Plus / Minus Query: 266 gcatctgaacctttcatgaccctcagccttcggcaagactcggtgaacatctcccatggg 325 ||||||||||||||||||| ||||| ||| ||||| || | ||||||||||| || Sbjct: 1138 gcatctgaacctttcatgatcctcaacctcttgcaagtgtcaataaacatctcccaaggt 1079 Query: 326 acgtcaccaaccagcatccagtctccgtccttgtcttc 363 || |||||||| ||||||||||| || ||||| ||||| Sbjct: 1078 acatcaccaacaagcatccagtccccatccttatcttc 1041
>ref|NM_186606.1| Oryza sativa (japonica cultivar-group), mRNA Length = 393 Score = 58.0 bits (29), Expect = 3e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 416 ccggtgctgaagccaatgaacattttctc 444 ||||||||||||||||||||||||||||| Sbjct: 104 ccggtgctgaagccaatgaacattttctc 76
>gb|AY098938.1| Solanum tuberosum Aux/IAA protein mRNA, complete cds Length = 1589 Score = 58.0 bits (29), Expect = 3e-05 Identities = 83/101 (82%) Strand = Plus / Minus Query: 266 gcatctgaacctttcatgaccctcagccttcggcaagactcggtgaacatctcccatggg 325 ||||||||||||||||||| ||||| ||| ||||| || | ||||||||||| || Sbjct: 1201 gcatctgaacctttcatgatcctcaacctcttgcaagtgtcaataaacatctcccaaggt 1142 Query: 326 acgtcaccaaccagcatccagtctccgtccttgtcttcgta 366 || ||||| || ||||||||||| || ||||| |||||||| Sbjct: 1141 acatcaccgacaagcatccagtccccatccttatcttcgta 1101
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 58.0 bits (29), Expect = 3e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 416 ccggtgctgaagccaatgaacattttctc 444 ||||||||||||||||||||||||||||| Sbjct: 6723358 ccggtgctgaagccaatgaacattttctc 6723386
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 316 ctcccatgggacgtcaccaaccagcatccagtctccgtccttgtcttcgtaggtcag 372 ||||||||| ||||| ||| ||| |||||||||||| |||| ||||||||| ||||| Sbjct: 30084112 ctcccatggcacgtctccagccatcatccagtctccctcctggtcttcgtatgtcag 30084056 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Minus Query: 316 ctcccatgggacgtcaccaaccagcatcca 345 ||||||||| ||||| |||||||||||||| Sbjct: 34367862 ctcccatggcacgtccccaaccagcatcca 34367833
>dbj|AP005113.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0685G12 Length = 149155 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 316 ctcccatgggacgtcaccaaccagcatccagtctccgtccttgtcttcgtaggtcag 372 ||||||||| ||||| ||| ||| |||||||||||| |||| ||||||||| ||||| Sbjct: 63709 ctcccatggcacgtctccagccatcatccagtctccctcctggtcttcgtatgtcag 63653
>dbj|AP005719.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1130E10 Length = 151606 Score = 58.0 bits (29), Expect = 3e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 416 ccggtgctgaagccaatgaacattttctc 444 ||||||||||||||||||||||||||||| Sbjct: 116357 ccggtgctgaagccaatgaacattttctc 116385
>dbj|AP005197.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0592C06 Length = 160071 Score = 58.0 bits (29), Expect = 3e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 416 ccggtgctgaagccaatgaacattttctc 444 ||||||||||||||||||||||||||||| Sbjct: 17492 ccggtgctgaagccaatgaacattttctc 17520
>emb|AJ306830.1|PTR306830 Populus tremula x Populus tremuloides mRNA for aux/IAA protein (IAA7 gene) Length = 1178 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 311 aacatctcccatgggacgtcaccaaccagcatccagtctccgtccttgtcttc 363 ||||| ||||||||||| ||||| || ||||||||||| |||||||| ||||| Sbjct: 668 aacatgtcccatgggacatcaccgacgagcatccagtcaccgtccttatcttc 616
>dbj|AP006634.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT15O18, TM0086, complete sequence Length = 133572 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 311 aacatctcccatgggacgtcaccaaccagcatccagtctccgtccttgtcttc 363 |||||||||||||| || || ||||| ||||||||||| || ||||||||||| Sbjct: 27203 aacatctcccatggaacatctccaactagcatccagtcaccatccttgtcttc 27151
>gb|AC144738.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0029B02, complete sequence Length = 156649 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 323 gggacgtcaccaaccagcatccagtctccgtccttgtcttcgtaggtcagcacgta 378 |||||||| || || ||||||||||| ||||||||||| ||||| ||| ||||||| Sbjct: 135044 gggacgtctccgacgagcatccagtcgccgtccttgtcctcgtacgtcggcacgta 135099
>gb|DQ442404.1| Striga asiatica clone StIAA-2 auxin-regulated protein mRNA, complete cds Length = 1126 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Minus Query: 311 aacatctcccatgggacgtcaccaaccagcatccagtctccgtccttgtcttcgtaggtc 370 |||||| |||| || || ||||| || |||||||| ||||| ||||||||||| |||||| Sbjct: 653 aacatcccccaaggaacatcaccgacaagcatccaatctccatccttgtcttcataggtc 594 Query: 371 agcacgta 378 ||||||| Sbjct: 593 ggcacgta 586
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 323 gggacgtcaccaaccagcatccagtctccgtccttgtcttcgtaggtcagcacgta 378 |||||||| || || ||||||||||| ||||||||||| |||||||| ||||||| Sbjct: 23119015 gggacgtcgccgacgagcatccagtcgccgtccttgtcctcgtaggtgggcacgta 23118960 Score = 40.1 bits (20), Expect = 6.1 Identities = 32/36 (88%) Strand = Plus / Plus Query: 316 ctcccatgggacgtcaccaaccagcatccagtctcc 351 ||||||||| ||||| || ||| ||||||||||||| Sbjct: 3341986 ctcccatggcacgtctccgacctgcatccagtctcc 3342021
>emb|BX822779.1|CNS0A64T Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB63ZG06 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 732 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Minus Query: 310 gaacatctcccatgggacgtcaccaaccagcatccagtctccgtccttgtcttcgtaggt 369 |||||||||||| || || || ||||||| ||||||||| || || |||||| |||| || Sbjct: 515 gaacatctcccaaggaacatctccaaccatcatccagtcaccttctttgtctgcgtacgt 456 Query: 370 cagcacgt 377 |||||||| Sbjct: 455 cagcacgt 448
>dbj|AP002903.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0509B06 Length = 104515 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 323 gggacgtcaccaaccagcatccagtctccgtccttgtcttcgtaggtcagcacgta 378 |||||||| || || ||||||||||| ||||||||||| ||||| ||| ||||||| Sbjct: 41373 gggacgtcgccgacgagcatccagtcgccgtccttgtcctcgtacgtcggcacgta 41428
>dbj|AP002524.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0406H10 Length = 156419 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 323 gggacgtcaccaaccagcatccagtctccgtccttgtcttcgtaggtcagcacgta 378 |||||||| || || ||||||||||| ||||||||||| ||||| ||| ||||||| Sbjct: 21601 gggacgtcgccgacgagcatccagtcgccgtccttgtcctcgtacgtcggcacgta 21656
>dbj|AP004236.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0417D05 Length = 165752 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 323 gggacgtcaccaaccagcatccagtctccgtccttgtcttcgtaggtcagcacgta 378 |||||||| || || ||||||||||| ||||||||||| |||||||| ||||||| Sbjct: 69663 gggacgtcgccgacgagcatccagtcgccgtccttgtcctcgtaggtgggcacgta 69608
>dbj|AK100080.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023001M24, full insert sequence Length = 1204 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 323 gggacgtcaccaaccagcatccagtctccgtccttgtcttcgtaggtcagcacgta 378 |||||||| || || ||||||||||| ||||||||||| ||||| ||| ||||||| Sbjct: 680 gggacgtctccgacgagcatccagtcgccgtccttgtcctcgtacgtcggcacgta 625
>dbj|AK061796.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-G05, full insert sequence Length = 1201 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 323 gggacgtcaccaaccagcatccagtctccgtccttgtcttcgtaggtcagcacgta 378 |||||||| || || ||||||||||| ||||||||||| ||||| ||| ||||||| Sbjct: 677 gggacgtctccgacgagcatccagtcgccgtccttgtcctcgtacgtcggcacgta 622
>dbj|AK061037.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-205-B07, full insert sequence Length = 1241 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 323 gggacgtcaccaaccagcatccagtctccgtccttgtcttcgtaggtcagcacgta 378 |||||||| || || ||||||||||| ||||||||||| |||||||| ||||||| Sbjct: 610 gggacgtcgccgacgagcatccagtcgccgtccttgtcctcgtaggtgggcacgta 555
>gb|AY289600.1| Pinus taeda auxin-induced protein 1 (IAA1) mRNA, complete cds Length = 1209 Score = 54.0 bits (27), Expect = 4e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 311 aacatctcccatgggacgtcaccaaccagcatccagtctccgtccttgtcttcgtaggt 369 ||||| ||||| ||||| || || || |||||||||||||| ||||||||||| ||||| Sbjct: 665 aacatatcccaggggacatcgcctacaagcatccagtctccatccttgtcttcataggt 607
>gb|AY062215.1| Antirrhinum majus auxin-induced AUX/IAA1 mRNA, partial cds Length = 517 Score = 54.0 bits (27), Expect = 4e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 309 tgaacatctcccatgggacgtcaccaaccagcatccagtctccgtccttgtcttc 363 ||||||| |||||||| || || ||||||| |||||| ||||| ||||||||||| Sbjct: 466 tgaacatatcccatggcacatctccaaccaacatccaatctccatccttgtcttc 412
>ref|NM_113205.1| Arabidopsis thaliana IAA7 (AUXIN RESISTANT 2); transcription factor AT3G23050 (IAA7) transcript variant AT3G23050.1 mRNA, complete cds Length = 1196 Score = 52.0 bits (26), Expect = 0.002 Identities = 59/70 (84%) Strand = Plus / Minus Query: 298 gcaagactcggtgaacatctcccatgggacgtcaccaaccagcatccagtctccgtcctt 357 |||||||||| ||||| ||||||||||| || ||||| ||||||||||| || || || Sbjct: 705 gcaagactcgacaaacatttcccatgggacatcgccaacgagcatccagtcaccatcttt 646 Query: 358 gtcttcgtag 367 ||| |||||| Sbjct: 645 gtcctcgtag 636
>gb|BT012096.1| Arabidopsis thaliana At3g23050 mRNA sequence Length = 732 Score = 52.0 bits (26), Expect = 0.002 Identities = 59/70 (84%) Strand = Plus / Minus Query: 298 gcaagactcggtgaacatctcccatgggacgtcaccaaccagcatccagtctccgtcctt 357 |||||||||| ||||| ||||||||||| || ||||| ||||||||||| || || || Sbjct: 648 gcaagactcgacaaacatttcccatgggacatcgccaacgagcatccagtcaccatcttt 589 Query: 358 gtcttcgtag 367 ||| |||||| Sbjct: 588 gtcctcgtag 579
>gb|AY137963.1| Mirabilis jalapa clone RS-74 Aux/IAA3 mRNA, partial cds Length = 301 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 310 gaacatctcccatgggacgtcaccaaccagcatccagtctccgtccttgtcttc 363 |||||||||||| || ||||| ||||| |||||||| |||||||| ||||||| Sbjct: 54 gaacatctcccaaggaacgtcgccaacaagcatccaatctccgtctctgtcttc 1
>gb|AY072461.1| Arabidopsis thaliana auxin-responsive protein IAA7 (At3g23050; MXC7.8) mRNA, complete cds Length = 782 Score = 52.0 bits (26), Expect = 0.002 Identities = 59/70 (84%) Strand = Plus / Minus Query: 298 gcaagactcggtgaacatctcccatgggacgtcaccaaccagcatccagtctccgtcctt 357 |||||||||| ||||| ||||||||||| || ||||| ||||||||||| || || || Sbjct: 648 gcaagactcgacaaacatttcccatgggacatcgccaacgagcatccagtcaccatcttt 589 Query: 358 gtcttcgtag 367 ||| |||||| Sbjct: 588 gtcctcgtag 579
>gb|AY054651.1| Arabidopsis thaliana auxin-responsive protein IAA7 (At3g23050; MXC7.8) mRNA, complete cds Length = 935 Score = 52.0 bits (26), Expect = 0.002 Identities = 59/70 (84%) Strand = Plus / Minus Query: 298 gcaagactcggtgaacatctcccatgggacgtcaccaaccagcatccagtctccgtcctt 357 |||||||||| ||||| ||||||||||| || ||||| ||||||||||| || || || Sbjct: 703 gcaagactcgacaaacatttcccatgggacatcgccaacgagcatccagtcaccatcttt 644 Query: 358 gtcttcgtag 367 ||| |||||| Sbjct: 643 gtcctcgtag 634
>gb|AF332395.1| Arabidopsis thaliana clone C00014 (o) indoleacetic acid-inducible protein IAA7 (At3g23050) mRNA, complete cds Length = 732 Score = 52.0 bits (26), Expect = 0.002 Identities = 59/70 (84%) Strand = Plus / Minus Query: 298 gcaagactcggtgaacatctcccatgggacgtcaccaaccagcatccagtctccgtcctt 357 |||||||||| ||||| ||||||||||| || ||||| ||||||||||| || || || Sbjct: 648 gcaagactcgacaaacatttcccatgggacatcgccaacgagcatccagtcaccatcttt 589 Query: 358 gtcttcgtag 367 ||| |||||| Sbjct: 588 gtcctcgtag 579
>emb|BX825560.1|CNS0A534 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL44ZG09 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 946 Score = 52.0 bits (26), Expect = 0.002 Identities = 59/70 (84%) Strand = Plus / Minus Query: 298 gcaagactcggtgaacatctcccatgggacgtcaccaaccagcatccagtctccgtcctt 357 |||||||||| ||||| ||||||||||| || ||||| ||||||||||| || || || Sbjct: 646 gcaagactcgacaaacatttcccatgggacatcgccaacgagcatccagtcaccatcttt 587 Query: 358 gtcttcgtag 367 ||| |||||| Sbjct: 586 gtcctcgtag 577
>gb|AY087765.1| Arabidopsis thaliana clone 38286 mRNA, complete sequence Length = 1195 Score = 52.0 bits (26), Expect = 0.002 Identities = 59/70 (84%) Strand = Plus / Minus Query: 298 gcaagactcggtgaacatctcccatgggacgtcaccaaccagcatccagtctccgtcctt 357 |||||||||| ||||| ||||||||||| || ||||| ||||||||||| || || || Sbjct: 705 gcaagactcgacaaacatttcccatgggacatcgccaacgagcatccagtcaccatcttt 646 Query: 358 gtcttcgtag 367 ||| |||||| Sbjct: 645 gtcctcgtag 636
>emb|AJ306829.1|PTR306829 Populus tremula x Populus tremuloides mRNA for aux/IAA protein (IAA6 gene) Length = 1206 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Minus Query: 311 aacatctcccatgggacgtcaccaaccagcatccagtctccgtccttgtcttcgtagg 368 |||||||||||||| || ||||| || |||||||| || || ||||||||||| |||| Sbjct: 944 aacatctcccatggaacatcacccacaagcatccaatcgccatccttgtcttcatagg 887
>emb|AJ249996.1|LES249996 Lycopersicon esculentum partial mRNA for auxin-responsive protein (ctd1 gene) Length = 454 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Minus Query: 266 gcatctgaacctttcatgaccctcagccttcggcaagactcggtgaacatctcccatggg 325 ||||||||||||||||||| ||||| |||| ||||| ||| | ||||||||||| ||| Sbjct: 66 gcatctgaacctttcatgatcctcaaccttttgcaagtatcgataaacatctcccagggg 7 Query: 326 ac 327 || Sbjct: 6 ac 5
>gb|AF169830.1|AF169830 Glycine max auxin-induced protein ali50 mRNA, partial cds Length = 731 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 311 aacatctcccatgggacgtcaccaaccagcatccagtc 348 ||||||||||||||||| ||||| || ||||||||||| Sbjct: 402 aacatctcccatgggacatcacccacgagcatccagtc 365
>gb|U18409.1|ATU18409 Arabidopsis thaliana IAA7 (IAA7) gene, complete cds Length = 899 Score = 52.0 bits (26), Expect = 0.002 Identities = 59/70 (84%) Strand = Plus / Minus Query: 298 gcaagactcggtgaacatctcccatgggacgtcaccaaccagcatccagtctccgtcctt 357 |||||||||| ||||| ||||||||||| || ||||| ||||||||||| || || || Sbjct: 670 gcaagactcgacaaacatttcccatgggacatcgccaacgagcatccagtcaccatcttt 611 Query: 358 gtcttcgtag 367 ||| |||||| Sbjct: 610 gtcctcgtag 601
>dbj|AB004933.1| Vigna radiata mRNA for Aux22e, complete cds Length = 1006 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 310 gaacatctcccatgggacgtcaccaaccagcatccagtctccgtccttgtcttc 363 |||||| | |||||| || || ||||||||||||||||| || ||||||||||| Sbjct: 620 gaacatgttccatggaacatctccaaccagcatccagtcaccatccttgtcttc 567
>ref|XM_469684.1| Oryza sativa (japonica cultivar-group), mRNA Length = 811 Score = 50.1 bits (25), Expect = 0.006 Identities = 46/53 (86%) Strand = Plus / Minus Query: 311 aacatctcccatgggacgtcaccaaccagcatccagtctccgtccttgtcttc 363 ||||||| ||| ||||| || ||||| ||||||||||| || ||||||||||| Sbjct: 717 aacatctgccacgggacatctccaacaagcatccagtcaccatccttgtcttc 665
>gb|AY137961.1| Mirabilis jalapa clone SM-36 Aux/IAA1 mRNA, partial cds Length = 291 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Minus Query: 311 aacatctcccatgggacgtcaccaaccagcatccagtctcc 351 |||||||||||||| || |||||||| |||||||| ||||| Sbjct: 200 aacatctcccatggaacatcaccaacaagcatccaatctcc 160
>gb|AY289604.1| Pinus taeda auxin-induced protein 5 (IAA5) mRNA, complete cds Length = 1289 Score = 50.1 bits (25), Expect = 0.006 Identities = 46/53 (86%) Strand = Plus / Minus Query: 311 aacatctcccatgggacgtcaccaaccagcatccagtctccgtccttgtcttc 363 ||||||| |||||| || || || || |||||||||||||| ||||||||||| Sbjct: 785 aacatctgccatggaacatcgcctacaagcatccagtctccatccttgtcttc 733
>gb|DQ442403.1| Striga asiatica clone StIAA-1 auxin-regulated protein mRNA, complete cds Length = 1228 Score = 50.1 bits (25), Expect = 0.006 Identities = 55/65 (84%) Strand = Plus / Minus Query: 311 aacatctcccatgggacgtcaccaaccagcatccagtctccgtccttgtcttcgtaggtc 370 ||||||||||| || || || ||||| |||||||||||||| ||||| || || || ||| Sbjct: 824 aacatctcccaaggaacatccccaacaagcatccagtctccatccttatcctcatacgtc 765 Query: 371 agcac 375 ||||| Sbjct: 764 agcac 760
>gb|AY129669.1| Mirabilis jalapa auxin-responsive protein IAA1 mRNA, partial cds Length = 990 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Minus Query: 311 aacatctcccatgggacgtcaccaaccagcatccagtctcc 351 |||||||||||||| || |||||||| |||||||| ||||| Sbjct: 491 aacatctcccatggaacatcaccaacaagcatccaatctcc 451
>emb|AJ251791.1|OSA251791 Oryza sativa partial mRNA for putative IAA1 protein (iaa1 gene) Length = 1068 Score = 50.1 bits (25), Expect = 0.006 Identities = 46/53 (86%) Strand = Plus / Minus Query: 311 aacatctcccatgggacgtcaccaaccagcatccagtctccgtccttgtcttc 363 ||||||| ||| ||||| || ||||| ||||||||||| || ||||||||||| Sbjct: 769 aacatctgccacgggacatctccaacaagcatccagtcaccatccttgtcttc 717
>dbj|AK100790.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023121A20, full insert sequence Length = 1092 Score = 50.1 bits (25), Expect = 0.006 Identities = 46/53 (86%) Strand = Plus / Minus Query: 311 aacatctcccatgggacgtcaccaaccagcatccagtctccgtccttgtcttc 363 ||||||| ||| ||||| || ||||| ||||||||||| || ||||||||||| Sbjct: 779 aacatctgccacgggacatctccaacaagcatccagtcaccatccttgtcttc 727
>dbj|AK059838.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-C11, full insert sequence Length = 1180 Score = 50.1 bits (25), Expect = 0.006 Identities = 46/53 (86%) Strand = Plus / Minus Query: 311 aacatctcccatgggacgtcaccaaccagcatccagtctccgtccttgtcttc 363 ||||||| ||| ||||| || ||||| ||||||||||| || ||||||||||| Sbjct: 774 aacatctgccacgggacatctccaacaagcatccagtcaccatccttgtcttc 722
>gb|AY104734.1| Zea mays PCO138559 mRNA sequence Length = 1116 Score = 50.1 bits (25), Expect = 0.006 Identities = 49/57 (85%) Strand = Plus / Minus Query: 310 gaacatctcccatgggacgtcaccaaccagcatccagtctccgtccttgtcttcgta 366 |||||||| ||| |||||||| || || ||||||||||| || |||||||| ||||| Sbjct: 650 gaacatcttccaggggacgtcgccgacgagcatccagtcgccatccttgtcctcgta 594
>dbj|D14413.1|VIRAUX22B Vigna radiata auxin-regulated mRNA Length = 1165 Score = 50.1 bits (25), Expect = 0.006 Identities = 46/53 (86%) Strand = Plus / Minus Query: 311 aacatctcccatgggacgtcaccaaccagcatccagtctccgtccttgtcttc 363 ||||| |||||||| || || ||||| ||||||||||| || ||||||||||| Sbjct: 579 aacatgtcccatggtacatctccaactagcatccagtcaccatccttgtcttc 527
>ref|NM_116075.2| Arabidopsis thaliana IAA30; transcription factor AT3G62100 (IAA30) mRNA, complete cds Length = 731 Score = 48.1 bits (24), Expect = 0.025 Identities = 57/68 (83%) Strand = Plus / Minus Query: 310 gaacatctcccatgggacgtcaccaaccagcatccagtctccgtccttgtcttcgtaggt 369 |||||||||||| || || || ||||||| ||||||||| || || |||||| |||| || Sbjct: 515 gaacatctcccaaggaacatctccaaccatcatccagtcaccttctttgtctgcgtacgt 456 Query: 370 cagcacgt 377 ||||||| Sbjct: 455 tagcacgt 448
>ref|NM_130267.3| Arabidopsis thaliana IAA20; transcription factor AT2G46990 (IAA20) mRNA, complete cds Length = 652 Score = 48.1 bits (24), Expect = 0.025 Identities = 57/68 (83%) Strand = Plus / Minus Query: 310 gaacatctcccatgggacgtcaccaaccagcatccagtctccgtccttgtcttcgtaggt 369 |||||||||||| || || || ||||||| ||||||||| || ||||| ||| |||| || Sbjct: 483 gaacatctcccaaggaacatctccaaccatcatccagtcaccttccttatctgcgtacgt 424 Query: 370 cagcacgt 377 ||||||| Sbjct: 423 tagcacgt 416
>ref|NM_202626.1| Arabidopsis thaliana IAA7 (AUXIN RESISTANT 2) AT3G23050 (IAA7) transcript variant AT3G23050.2 mRNA, complete cds Length = 990 Score = 48.1 bits (24), Expect = 0.025 Identities = 45/52 (86%) Strand = Plus / Minus Query: 316 ctcccatgggacgtcaccaaccagcatccagtctccgtccttgtcttcgtag 367 |||||||||||| || ||||| ||||||||||| || || ||||| |||||| Sbjct: 687 ctcccatgggacatcgccaacgagcatccagtcaccatctttgtcctcgtag 636
>emb|AJ566558.1|TCA566558 Theobroma cacao microsatellite, clone mTcCIR237 Length = 208 Score = 48.1 bits (24), Expect = 0.025 Identities = 30/32 (93%) Strand = Plus / Minus Query: 332 ccaaccagcatccagtctccgtccttgtcttc 363 ||||| |||||||||||||| ||||||||||| Sbjct: 79 ccaactagcatccagtctccatccttgtcttc 48
>gb|AF348576.1| Arabidopsis thaliana clone C00049 (f) auxin-induced protein IAA20 (At2g46990) mRNA, complete cds Length = 528 Score = 48.1 bits (24), Expect = 0.025 Identities = 57/68 (83%) Strand = Plus / Minus Query: 310 gaacatctcccatgggacgtcaccaaccagcatccagtctccgtccttgtcttcgtaggt 369 |||||||||||| || || || ||||||| ||||||||| || ||||| ||| |||| || Sbjct: 477 gaacatctcccaaggaacatctccaaccatcatccagtcaccttccttatctgcgtacgt 418 Query: 370 cagcacgt 377 ||||||| Sbjct: 417 tagcacgt 410
>dbj|AK117233.1| Arabidopsis thaliana At2g46990 mRNA for putative auxin-induced protein, complete cds, clone: RAFL16-78-L02 Length = 644 Score = 48.1 bits (24), Expect = 0.025 Identities = 57/68 (83%) Strand = Plus / Minus Query: 310 gaacatctcccatgggacgtcaccaaccagcatccagtctccgtccttgtcttcgtaggt 369 |||||||||||| || || || ||||||| ||||||||| || ||||| ||| |||| || Sbjct: 483 gaacatctcccaaggaacatctccaaccatcatccagtcaccttccttatctgcgtacgt 424 Query: 370 cagcacgt 377 ||||||| Sbjct: 423 tagcacgt 416
>dbj|AB026655.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MXC7 Length = 79284 Score = 48.1 bits (24), Expect = 0.025 Identities = 45/52 (86%) Strand = Plus / Minus Query: 316 ctcccatgggacgtcaccaaccagcatccagtctccgtccttgtcttcgtag 367 |||||||||||| || ||||| ||||||||||| || || ||||| |||||| Sbjct: 36825 ctcccatgggacatcgccaacgagcatccagtcaccatctttgtcctcgtag 36774
>emb|AJ306825.1|PTR306825 Populus tremula x Populus tremuloides mRNA for aux/IAA protein (IAA2 gene) Length = 1763 Score = 48.1 bits (24), Expect = 0.025 Identities = 39/44 (88%) Strand = Plus / Minus Query: 311 aacatctcccatgggacgtcaccaaccagcatccagtctccgtc 354 ||||||||||| || || || ||||| ||||||||||||||||| Sbjct: 1191 aacatctcccagggaacatcgccaacaagcatccagtctccgtc 1148
>gb|U49076.1|ATU49076 Arabidopsis thaliana early auxin-induced (IAA20) mRNA, partial cds Length = 624 Score = 48.1 bits (24), Expect = 0.025 Identities = 57/68 (83%) Strand = Plus / Minus Query: 310 gaacatctcccatgggacgtcaccaaccagcatccagtctccgtccttgtcttcgtaggt 369 |||||||||||| || || || ||||||| ||||||||| || ||||| ||| |||| || Sbjct: 451 gaacatctcccaaggaacatctccaaccatcatccagtcaccttccttatctgcgtacgt 392 Query: 370 cagcacgt 377 ||||||| Sbjct: 391 tagcacgt 384
>gb|AY669801.1| Arabidopsis thaliana clone C105339 IAA30 (At3g62100) mRNA, complete cds Length = 550 Score = 48.1 bits (24), Expect = 0.025 Identities = 57/68 (83%) Strand = Plus / Minus Query: 310 gaacatctcccatgggacgtcaccaaccagcatccagtctccgtccttgtcttcgtaggt 369 |||||||||||| || || || ||||||| ||||||||| || || |||||| |||| || Sbjct: 471 gaacatctcccaaggaacatctccaaccatcatccagtcaccttctttgtctgcgtacgt 412 Query: 370 cagcacgt 377 ||||||| Sbjct: 411 tagcacgt 404
>gb|AY847064.1| Avena sativa Aux/IAA3 mRNA, partial cds Length = 360 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Minus Query: 343 ccagtctccgtccttgtcttcgta 366 |||||||||||||||||||||||| Sbjct: 360 ccagtctccgtccttgtcttcgta 337
>ref|NM_100305.2| Arabidopsis thaliana SHY2 (SHORT HYPOCOTYL 2); transcription factor AT1G04240 (SHY2) mRNA, complete cds Length = 1042 Score = 46.1 bits (23), Expect = 0.099 Identities = 47/55 (85%) Strand = Plus / Minus Query: 309 tgaacatctcccatgggacgtcaccaaccagcatccagtctccgtccttgtcttc 363 |||||||||||||||| || ||||||| |||||||| || || || |||||||| Sbjct: 598 tgaacatctcccatggaacatcaccaatgagcatccaatcaccatctttgtcttc 544
>gb|AY064007.1| Arabidopsis thaliana putative auxin-induced protein IAA3 (At1g04240) mRNA, complete cds Length = 1003 Score = 46.1 bits (23), Expect = 0.099 Identities = 47/55 (85%) Strand = Plus / Minus Query: 309 tgaacatctcccatgggacgtcaccaaccagcatccagtctccgtccttgtcttc 363 |||||||||||||||| || ||||||| |||||||| || || || |||||||| Sbjct: 598 tgaacatctcccatggaacatcaccaatgagcatccaatcaccatctttgtcttc 544
>gb|AF332393.1| Arabidopsis thaliana clone C00011 (f) auxin-induced protein IAA3 (At1g04240) mRNA, complete cds Length = 570 Score = 46.1 bits (23), Expect = 0.099 Identities = 47/55 (85%) Strand = Plus / Minus Query: 309 tgaacatctcccatgggacgtcaccaaccagcatccagtctccgtccttgtcttc 363 |||||||||||||||| || ||||||| |||||||| || || || |||||||| Sbjct: 502 tgaacatctcccatggaacatcaccaatgagcatccaatcaccatctttgtcttc 448
>emb|X68217.1|PSIAA6R P.sativum mRNA for auxin-induced protein (clone pIAA6) Length = 702 Score = 46.1 bits (23), Expect = 0.099 Identities = 32/35 (91%) Strand = Plus / Minus Query: 311 aacatctcccatgggacgtcaccaaccagcatcca 345 ||||||||||| ||||| || |||||||||||||| Sbjct: 378 aacatctcccaagggacatctccaaccagcatcca 344
>emb|AJ417876.1|NTA417876 Nicotiana tabacum mRNA for IAA9 protein Length = 1675 Score = 46.1 bits (23), Expect = 0.099 Identities = 68/83 (81%) Strand = Plus / Minus Query: 266 gcatctgaacctttcatgaccctcagccttcggcaagactcggtgaacatctcccatggg 325 ||||||||||||||||||| ||||||||| || | || | ||||||||||| ||| Sbjct: 1198 gcatctgaacctttcatgattctcagccttttacaggtttcaataaacatctcccagggg 1139 Query: 326 acgtcaccaaccagcatccagtc 348 || ||||| || ||||||||||| Sbjct: 1138 acatcaccgacaagcatccagtc 1116
>gb|U18406.1|ATU18406 Arabidopsis thaliana IAA3 (IAA3) gene, complete cds Length = 1031 Score = 46.1 bits (23), Expect = 0.099 Identities = 47/55 (85%) Strand = Plus / Minus Query: 309 tgaacatctcccatgggacgtcaccaaccagcatccagtctccgtccttgtcttc 363 |||||||||||||||| || ||||||| |||||||| || || || |||||||| Sbjct: 587 tgaacatctcccatggaacatcaccaatgagcatccaatcaccatctttgtcttc 533
>gb|AC069158.6| Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0049O12, from chromosome 2, complete sequence Length = 155154 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Plus Query: 316 ctcccatgggacgtcaccaaccagcatcca 345 ||||||||| ||||| |||||||||||||| Sbjct: 137244 ctcccatggcacgtccccaaccagcatcca 137273
>emb|BX822145.1|CNS0A5ZY Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB16ZA02 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1329 Score = 44.1 bits (22), Expect = 0.39 Identities = 43/50 (86%) Strand = Plus / Minus Query: 298 gcaagactcggtgaacatctcccatgggacgtcaccaaccagcatccagt 347 |||||||||| ||||| ||||||||||| || ||||| |||||||||| Sbjct: 949 gcaagactcgacaaacatttcccatgggacatcgccaacgagcatccagt 900
>gb|AF154652.1| Nicotiana tabacum clone PR39 mRNA sequence Length = 824 Score = 44.1 bits (22), Expect = 0.39 Identities = 34/38 (89%) Strand = Plus / Minus Query: 311 aacatctcccatgggacgtcaccaaccagcatccagtc 348 ||||||||||| ||||| ||||| || ||||||||||| Sbjct: 739 aacatctcccaagggacatcaccgacaagcatccagtc 702
>gb|AY085353.1| Arabidopsis thaliana clone 147711 mRNA, complete sequence Length = 783 Score = 44.1 bits (22), Expect = 0.39 Identities = 49/58 (84%) Strand = Plus / Minus Query: 309 tgaacatctcccatgggacgtcaccaaccagcatccagtctccgtccttgtcttcgta 366 ||||||||| ||| || || || || || ||||||||||||| |||||||||||||| Sbjct: 582 tgaacatctgccaaggtacatctccgacgagcatccagtctctatccttgtcttcgta 525
>gb|AF123507.1| Nicotiana tabacum Nt-iaa4.5 deduced protein mRNA, complete cds Length = 993 Score = 44.1 bits (22), Expect = 0.39 Identities = 46/54 (85%) Strand = Plus / Minus Query: 310 gaacatctcccatgggacgtcaccaaccagcatccagtctccgtccttgtcttc 363 |||||| |||||||| || || ||||| |||||||| || || ||||||||||| Sbjct: 612 gaacatatcccatggtacatctccaactagcatccaatcaccatccttgtcttc 559
>dbj|AP004240.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1548_F12 Length = 118814 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Minus Query: 316 ctcccatgggacgtcaccaaccagcatcca 345 ||||||||| ||||| |||||||||||||| Sbjct: 65509 ctcccatggcacgtccccaaccagcatcca 65480
>dbj|AP006633.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT12L11, TM0071, complete sequence Length = 69786 Score = 44.1 bits (22), Expect = 0.39 Identities = 46/54 (85%) Strand = Plus / Minus Query: 316 ctcccatgggacgtcaccaaccagcatccagtctccgtccttgtcttcgtaggt 369 |||||||||||| || || || ||||||||||| || ||||| ||||| ||||| Sbjct: 23077 ctcccatgggacatctcccacgagcatccagtcaccatccttatcttcataggt 23024
>dbj|D14412.1|VIRAUX22A Vigna radiata auxin-regulated mRNA Length = 838 Score = 44.1 bits (22), Expect = 0.39 Identities = 43/50 (86%) Strand = Plus / Minus Query: 299 caagactcggtgaacatctcccatgggacgtcaccaaccagcatccagtc 348 |||||||| ||||||| |||||||| || || ||||| ||||||||||| Sbjct: 552 caagactccatgaacatttcccatggcacatctccaacaagcatccagtc 503
>dbj|AB004932.1| Vigna radiata mRNA for Aux22d, complete cds Length = 936 Score = 44.1 bits (22), Expect = 0.39 Identities = 46/54 (85%) Strand = Plus / Minus Query: 310 gaacatctcccatgggacgtcaccaaccagcatccagtctccgtccttgtcttc 363 |||||| | |||||| || || ||||||||||||||||| || || |||||||| Sbjct: 605 gaacatgttccatggaacatctccaaccagcatccagtcaccatctttgtcttc 552
>dbj|AB004931.1| Vigna radiata mRNA for Aux22c, complete cds Length = 899 Score = 44.1 bits (22), Expect = 0.39 Identities = 34/38 (89%) Strand = Plus / Minus Query: 311 aacatctcccatgggacgtcaccaaccagcatccagtc 348 ||||||||||| || || || ||||||||||||||||| Sbjct: 474 aacatctcccaaggaacatctccaaccagcatccagtc 437
>ref|NM_112422.2| Arabidopsis thaliana IAA19; transcription factor AT3G15540 (IAA19) mRNA, complete cds Length = 968 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 338 agcatccagtctccgtccttgtcttcgta 366 |||||||||||||| || ||||||||||| Sbjct: 558 agcatccagtctccatctttgtcttcgta 530
>ref|NM_104161.2| Arabidopsis thaliana IAA6; transcription factor AT1G52830 (IAA6) mRNA, complete cds Length = 829 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 338 agcatccagtctccgtccttgtcttcgta 366 ||||||||||||| |||||||||||||| Sbjct: 555 agcatccagtctctatccttgtcttcgta 527
>ref|NM_119006.3| Arabidopsis thaliana IAA11; transcription factor AT4G28640 (IAA11) mRNA, complete cds Length = 1108 Score = 42.1 bits (21), Expect = 1.5 Identities = 45/53 (84%) Strand = Plus / Minus Query: 311 aacatctcccatgggacgtcaccaaccagcatccagtctccgtccttgtcttc 363 |||||| |||| || || || ||||| |||||||| ||||| ||||||||||| Sbjct: 821 aacatcccccacggaacatcgccaacaagcatccaatctccttccttgtcttc 769
>ref|NM_117535.4| Arabidopsis thaliana IAA14 (SOLITARY ROOT); transcription factor AT4G14550 (IAA14) mRNA, complete cds Length = 1482 Score = 42.1 bits (21), Expect = 1.5 Identities = 39/45 (86%) Strand = Plus / Minus Query: 323 gggacgtcaccaaccagcatccagtctccgtccttgtcttcgtag 367 ||||| |||||||| ||||||||||| || || ||||| |||||| Sbjct: 677 gggacatcaccaacgagcatccagtcaccatctttgtcctcgtag 633
>ref|NM_123736.2| Arabidopsis thaliana ATAUX2-11; transcription factor AT5G43700 (ATAUX2-11) mRNA, complete cds Length = 1168 Score = 42.1 bits (21), Expect = 1.5 Identities = 45/53 (84%) Strand = Plus / Minus Query: 311 aacatctcccatgggacgtcaccaaccagcatccagtctccgtccttgtcttc 363 ||||||||||| || || |||||||| |||||||| || || || |||||||| Sbjct: 720 aacatctcccaaggaacatcaccaacaagcatccaatcaccatctttgtcttc 668
>ref|XM_468283.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1012 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 317 tcccatgggacgtcaccaaccagcatcca 345 |||||||| ||||| |||||||||||||| Sbjct: 654 tcccatggcacgtccccaaccagcatcca 626
>ref|NM_191150.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1008 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 319 ccatgggacgtcaccaaccagcatccagtctcc 351 |||||| ||||| ||||||||||||| |||||| Sbjct: 918 ccatggcacgtccccaaccagcatcctgtctcc 886
>ref|XM_469685.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1379 Score = 42.1 bits (21), Expect = 1.5 Identities = 36/41 (87%) Strand = Plus / Minus Query: 323 gggacgtcaccaaccagcatccagtctccgtccttgtcttc 363 ||||| || ||||| ||||||||||| || ||||||||||| Sbjct: 760 gggacatctccaacaagcatccagtcaccatccttgtcttc 720
>gb|AF334718.1| Arabidopsis thaliana IAA14 (At4g14550) mRNA, complete cds Length = 687 Score = 42.1 bits (21), Expect = 1.5 Identities = 39/45 (86%) Strand = Plus / Minus Query: 323 gggacgtcaccaaccagcatccagtctccgtccttgtcttcgtag 367 ||||| |||||||| ||||||||||| || || ||||| |||||| Sbjct: 581 gggacatcaccaacgagcatccagtcaccatctttgtcctcgtag 537
>gb|AC144735.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0001A14, complete sequence Length = 129292 Score = 42.1 bits (21), Expect = 1.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 329 tcaccaaccagcatccagtctccgtccttgtcttcgtaggt 369 |||||||| ||||||||||| | ||||||||||| ||||| Sbjct: 95023 tcaccaacaagcatccagtcagcatccttgtcttcataggt 95063
>gb|AC096855.5| Oryza sativa chromosome 3 BAC OJ1365_D05 genomic sequence, complete sequence Length = 163972 Score = 42.1 bits (21), Expect = 1.5 Identities = 36/41 (87%) Strand = Plus / Minus Query: 323 gggacgtcaccaaccagcatccagtctccgtccttgtcttc 363 ||||| || ||||| ||||||||||| || ||||||||||| Sbjct: 35027 gggacatctccaacaagcatccagtcaccatccttgtcttc 34987
>emb|AJ563599.2|OSA563599 Oryza sativa (indica cultivar-group) iaa1 gene for Aux/IAA protein, exons 1-5 Length = 4539 Score = 42.1 bits (21), Expect = 1.5 Identities = 36/41 (87%) Strand = Plus / Minus Query: 323 gggacgtcaccaaccagcatccagtctccgtccttgtcttc 363 ||||| || ||||| ||||||||||| || ||||||||||| Sbjct: 3952 gggacatctccaacaagcatccagtcaccatccttgtcttc 3912
>gb|AC024081.1| Arabidopsis thaliana chromosome III P1 MJK13 genomic sequence, complete sequence Length = 82893 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 338 agcatccagtctccgtccttgtcttcgta 366 |||||||||||||| || ||||||||||| Sbjct: 79618 agcatccagtctccatctttgtcttcgta 79590
>emb|Z97336.1|ATFCA1 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 1 Length = 206606 Score = 42.1 bits (21), Expect = 1.5 Identities = 39/45 (86%) Strand = Plus / Plus Query: 323 gggacgtcaccaaccagcatccagtctccgtccttgtcttcgtag 367 ||||| |||||||| ||||||||||| || || ||||| |||||| Sbjct: 107016 gggacatcaccaacgagcatccagtcaccatctttgtcctcgtag 107060
>gb|BT000261.1| Arabidopsis thaliana early auxin-inducible protein 11 (At4g28640) mRNA, complete cds Length = 887 Score = 42.1 bits (21), Expect = 1.5 Identities = 45/53 (84%) Strand = Plus / Minus Query: 311 aacatctcccatgggacgtcaccaaccagcatccagtctccgtccttgtcttc 363 |||||| |||| || || || ||||| |||||||| ||||| ||||||||||| Sbjct: 668 aacatcccccacggaacatcgccaacaagcatccaatctccttccttgtcttc 616
>emb|AL161539.2|ATCHRIV39 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 39 Length = 197976 Score = 42.1 bits (21), Expect = 1.5 Identities = 39/45 (86%) Strand = Plus / Plus Query: 323 gggacgtcaccaaccagcatccagtctccgtccttgtcttcgtag 367 ||||| |||||||| ||||||||||| || || ||||| |||||| Sbjct: 52512 gggacatcaccaacgagcatccagtcaccatctttgtcctcgtag 52556
>gb|AY099670.1| Arabidopsis thaliana early auxin-inducible protein 11 (At4g28640) mRNA, complete cds Length = 1091 Score = 42.1 bits (21), Expect = 1.5 Identities = 45/53 (84%) Strand = Plus / Minus Query: 311 aacatctcccatgggacgtcaccaaccagcatccagtctccgtccttgtcttc 363 |||||| |||| || || || ||||| |||||||| ||||| ||||||||||| Sbjct: 807 aacatcccccacggaacatcgccaacaagcatccaatctccttccttgtcttc 755
>gb|BT024586.1| Arabidopsis thaliana At3g15540 mRNA, complete cds Length = 594 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 338 agcatccagtctccgtccttgtcttcgta 366 |||||||||||||| || ||||||||||| Sbjct: 482 agcatccagtctccatctttgtcttcgta 454
>gb|AF336915.1| Arabidopsis thaliana clone C00013 (h) IAA6 (At1g52830) mRNA, complete cds Length = 570 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 338 agcatccagtctccgtccttgtcttcgta 366 ||||||||||||| |||||||||||||| Sbjct: 470 agcatccagtctctatccttgtcttcgta 442
>gb|AF332397.1| Arabidopsis thaliana clone C00018 (e) early auxin-inducible protein 11 (At4g28640) mRNA, complete cds Length = 741 Score = 42.1 bits (21), Expect = 1.5 Identities = 45/53 (84%) Strand = Plus / Minus Query: 311 aacatctcccatgggacgtcaccaaccagcatccagtctccgtccttgtcttc 363 |||||| |||| || || || ||||| |||||||| ||||| ||||||||||| Sbjct: 668 aacatcccccacggaacatcgccaacaagcatccaatctccttccttgtcttc 616
>emb|BX817970.1|CNS0AE4C Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL54ZB06 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 742 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 338 agcatccagtctccgtccttgtcttcgta 366 ||||||||||||| |||||||||||||| Sbjct: 542 agcatccagtctctatccttgtcttcgta 514
>emb|BX827786.1|CNS0A3TV Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH21ZC02 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1476 Score = 42.1 bits (21), Expect = 1.5 Identities = 39/45 (86%) Strand = Plus / Minus Query: 323 gggacgtcaccaaccagcatccagtctccgtccttgtcttcgtag 367 ||||| |||||||| ||||||||||| || || ||||| |||||| Sbjct: 670 gggacatcaccaacgagcatccagtcaccatctttgtcctcgtag 626
>gb|AC019018.9|AC019018 Arabidopsis thaliana chromosome 1 BAC F14G24 genomic sequence, complete sequence Length = 126253 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 338 agcatccagtctccgtccttgtcttcgta 366 ||||||||||||| |||||||||||||| Sbjct: 41970 agcatccagtctctatccttgtcttcgta 41998
>gb|BT005853.1| Arabidopsis thaliana At5g43700 gene, complete cds Length = 561 Score = 42.1 bits (21), Expect = 1.5 Identities = 45/53 (84%) Strand = Plus / Minus Query: 311 aacatctcccatgggacgtcaccaaccagcatccagtctccgtccttgtcttc 363 ||||||||||| || || |||||||| |||||||| || || || |||||||| Sbjct: 488 aacatctcccaaggaacatcaccaacaagcatccaatcaccatctttgtcttc 436
>dbj|AP003768.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0439E07 Length = 176486 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 319 ccatgggacgtcaccaaccagcatccagtctcc 351 |||||| ||||| ||||||||||||| |||||| Sbjct: 28841 ccatggcacgtccccaaccagcatcctgtctcc 28809
>gb|AY088753.1| Arabidopsis thaliana clone 94231 mRNA, complete sequence Length = 939 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 338 agcatccagtctccgtccttgtcttcgta 366 |||||||||||||| || ||||||||||| Sbjct: 529 agcatccagtctccatctttgtcttcgta 501
>dbj|AK109363.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-E12, full insert sequence Length = 1220 Score = 42.1 bits (21), Expect = 1.5 Identities = 36/41 (87%) Strand = Plus / Minus Query: 329 tcaccaaccagcatccagtctccgtccttgtcttcgtaggt 369 |||||||| ||||||||||| | ||||||||||| ||||| Sbjct: 817 tcaccaacaagcatccagtcagcatccttgtcttcataggt 777
>dbj|AK118377.1| Arabidopsis thaliana At4g28640 mRNA for putative early auxin-inducible protein 11 (IAA11), complete cds, clone: RAFL19-64-E04 Length = 1093 Score = 42.1 bits (21), Expect = 1.5 Identities = 45/53 (84%) Strand = Plus / Minus Query: 311 aacatctcccatgggacgtcaccaaccagcatccagtctccgtccttgtcttc 363 |||||| |||| || || || ||||| |||||||| ||||| ||||||||||| Sbjct: 807 aacatcccccacggaacatcgccaacaagcatccaatctccttccttgtcttc 755
>dbj|AB022218.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MJK13 Length = 82893 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 338 agcatccagtctccgtccttgtcttcgta 366 |||||||||||||| || ||||||||||| Sbjct: 79618 agcatccagtctccatctttgtcttcgta 79590
>dbj|AK111128.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-176-C09, full insert sequence Length = 956 Score = 42.1 bits (21), Expect = 1.5 Identities = 39/45 (86%) Strand = Plus / Minus Query: 310 gaacatctcccatgggacgtcaccaaccagcatccagtctccgtc 354 |||||||||||| || ||||| || || ||||||||||| ||||| Sbjct: 416 gaacatctcccagggcacgtcgccgacgagcatccagtcgccgtc 372
>dbj|AK106181.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-D03, full insert sequence Length = 1261 Score = 42.1 bits (21), Expect = 1.5 Identities = 36/41 (87%) Strand = Plus / Minus Query: 329 tcaccaaccagcatccagtctccgtccttgtcttcgtaggt 369 |||||||| ||||||||||| | ||||||||||| ||||| Sbjct: 858 tcaccaacaagcatccagtcagcatccttgtcttcataggt 818
>dbj|AK104018.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-H11, full insert sequence Length = 1221 Score = 42.1 bits (21), Expect = 1.5 Identities = 36/41 (87%) Strand = Plus / Minus Query: 329 tcaccaaccagcatccagtctccgtccttgtcttcgtaggt 369 |||||||| ||||||||||| | ||||||||||| ||||| Sbjct: 811 tcaccaacaagcatccagtcagcatccttgtcttcataggt 771
>dbj|AK099253.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013168H04, full insert sequence Length = 1209 Score = 42.1 bits (21), Expect = 1.5 Identities = 36/41 (87%) Strand = Plus / Minus Query: 329 tcaccaaccagcatccagtctccgtccttgtcttcgtaggt 369 |||||||| ||||||||||| | ||||||||||| ||||| Sbjct: 806 tcaccaacaagcatccagtcagcatccttgtcttcataggt 766
>dbj|AK073365.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033030K18, full insert sequence Length = 1012 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 317 tcccatgggacgtcaccaaccagcatcca 345 |||||||| ||||| |||||||||||||| Sbjct: 654 tcccatggcacgtccccaaccagcatcca 626
>dbj|AK073361.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033027E22, full insert sequence Length = 1165 Score = 42.1 bits (21), Expect = 1.5 Identities = 51/61 (83%) Strand = Plus / Minus Query: 309 tgaacatctcccatgggacgtcaccaaccagcatccagtctccgtccttgtcttcgtagg 368 |||||||||| |||||||||| || || ||||| ||| ||||||||||| ||||||| Sbjct: 648 tgaacatctcgaatgggacgtcgccgacgagcatgaggtcgccgtccttgtcctcgtagg 589 Query: 369 t 369 | Sbjct: 588 t 588
>dbj|AK068600.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013154A18, full insert sequence Length = 2214 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 319 ccatgggacgtcaccaaccagcatccagtctcc 351 |||||| ||||| ||||||||||||| |||||| Sbjct: 1775 ccatggcacgtccccaaccagcatcctgtctcc 1743
>dbj|AK061439.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-B11, full insert sequence Length = 1222 Score = 42.1 bits (21), Expect = 1.5 Identities = 36/41 (87%) Strand = Plus / Minus Query: 329 tcaccaaccagcatccagtctccgtccttgtcttcgtaggt 369 |||||||| ||||||||||| | ||||||||||| ||||| Sbjct: 819 tcaccaacaagcatccagtcagcatccttgtcttcataggt 779
>gb|U18416.1|ATU18416 Arabidopsis thaliana IAA14 (IAA14) gene, partial cds Length = 732 Score = 42.1 bits (21), Expect = 1.5 Identities = 39/45 (86%) Strand = Plus / Minus Query: 323 gggacgtcaccaaccagcatccagtctccgtccttgtcttcgtag 367 ||||| |||||||| ||||||||||| || || ||||| |||||| Sbjct: 389 gggacatcaccaacgagcatccagtcaccatctttgtcctcgtag 345
>gb|U18413.1|ATU18413 Arabidopsis thaliana IAA11 (IAA11) gene, complete cds Length = 998 Score = 42.1 bits (21), Expect = 1.5 Identities = 45/53 (84%) Strand = Plus / Minus Query: 311 aacatctcccatgggacgtcaccaaccagcatccagtctccgtccttgtcttc 363 |||||| |||| || || || ||||| |||||||| ||||| ||||||||||| Sbjct: 711 aacatcccccacggaacatcgccaacaagcatccaatctccttccttgtcttc 659
>gb|U18408.1|ATU18408 Arabidopsis thaliana IAA6 (IAA6) gene, complete cds Length = 764 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 338 agcatccagtctccgtccttgtcttcgta 366 ||||||||||||| |||||||||||||| Sbjct: 490 agcatccagtctctatccttgtcttcgta 462
>emb|CT033754.8| Mouse DNA sequence from clone RP23-174E11 on chromosome 9, complete sequence Length = 165339 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 429 caatgaacattttctctagcc 449 ||||||||||||||||||||| Sbjct: 35599 caatgaacattttctctagcc 35619
>gb|U49075.1|ATU49075 Arabidopsis thaliana early auxin-induced (IAA19) mRNA, partial cds Length = 620 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 338 agcatccagtctccgtccttgtcttcgta 366 |||||||||||||| || ||||||||||| Sbjct: 327 agcatccagtctccatctttgtcttcgta 299
>gb|AY669798.1| Arabidopsis thaliana clone C105336 IAA19 (At3g15540) mRNA, complete cds Length = 625 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 338 agcatccagtctccgtccttgtcttcgta 366 |||||||||||||| || ||||||||||| Sbjct: 482 agcatccagtctccatctttgtcttcgta 454
>dbj|AP006130.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT36O13, TM0226, complete sequence Length = 140838 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 316 ctcccatgggacgtcaccaaccagcatccagtc 348 |||||| ||||| || ||||||||||||||||| Sbjct: 57582 ctcccaagggacatctccaaccagcatccagtc 57550
>gb|L15450.1|ATHIAA4A Arabidopsis thaliana auxin-responsive protein (IAA4) mRNA, 5' partial cds Length = 558 Score = 42.1 bits (21), Expect = 1.5 Identities = 45/53 (84%) Strand = Plus / Minus Query: 311 aacatctcccatgggacgtcaccaaccagcatccagtctccgtccttgtcttc 363 ||||||||||| || || |||||||| |||||||| || || || |||||||| Sbjct: 488 aacatctcccaaggaacatcaccaacaagcatccaatcaccatctttgtcttc 436
>ref|XM_550358.1| Oryza sativa (japonica cultivar-group), mRNA Length = 998 Score = 40.1 bits (20), Expect = 6.1 Identities = 32/36 (88%) Strand = Plus / Minus Query: 316 ctcccatgggacgtcaccaaccagcatccagtctcc 351 ||||||||| ||||| || ||| ||||||||||||| Sbjct: 573 ctcccatggcacgtctccgacctgcatccagtctcc 538
>gb|AC130697.10| Mus musculus chromosome 15, clone RP24-121O7, complete sequence Length = 152112 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 432 tgaacattttctctagcccc 451 |||||||||||||||||||| Sbjct: 143061 tgaacattttctctagcccc 143080
>gb|AC084386.2| Mus musculus BAC clone RP23-61O2 from 17, complete sequence Length = 209523 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 388 ctttctgttctcagatacaccatc 411 ||||||||||||||| |||||||| Sbjct: 196794 ctttctgttctcagagacaccatc 196817
>ref|XM_763526.1| Giardia lamblia ATCC 50803 hypothetical protein (GLP_169_22321_32229) partial mRNA Length = 9909 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 33 tggaaatagcatgcgtacaa 52 |||||||||||||||||||| Sbjct: 8760 tggaaatagcatgcgtacaa 8741
>emb|AL161573.2|ATCHRIV69 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 69 Length = 197655 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 332 ccaaccagcatccagtctccgtccttgtcttc 363 ||||| |||||||| ||||| ||||||||||| Sbjct: 64214 ccaacaagcatccaatctccttccttgtcttc 64183
>gb|AC087382.11| Homo sapiens chromosome 15, clone RP11-653J6, complete sequence Length = 227632 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 333 caaccagcatccagtctccg 352 |||||||||||||||||||| Sbjct: 125967 caaccagcatccagtctccg 125948
>gb|AC048334.21| Homo sapiens 3 BAC RP11-572C15 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 215719 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 424 gaagccaatgaacattttct 443 |||||||||||||||||||| Sbjct: 43122 gaagccaatgaacattttct 43103
>gb|AC155636.3| Mus musculus BAC clone RP23-345F5 from chromosome 17, complete sequence Length = 223528 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 388 ctttctgttctcagatacaccatc 411 ||||||||||||||| |||||||| Sbjct: 151297 ctttctgttctcagagacaccatc 151274
>gb|AY087635.1| Arabidopsis thaliana clone 37274 mRNA, complete sequence Length = 1403 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 314 atctcccatgggacgtcaccaaccagcatcca 345 |||||||||||||| || ||||| |||||||| Sbjct: 1092 atctcccatgggacatcgccaacaagcatcca 1061
>dbj|AP002536.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0015I14 Length = 150650 Score = 40.1 bits (20), Expect = 6.1 Identities = 32/36 (88%) Strand = Plus / Plus Query: 316 ctcccatgggacgtcaccaaccagcatccagtctcc 351 ||||||||| ||||| || ||| ||||||||||||| Sbjct: 129349 ctcccatggcacgtctccgacctgcatccagtctcc 129384
>dbj|AB023482.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, clone P0680A03 Length = 156054 Score = 40.1 bits (20), Expect = 6.1 Identities = 32/36 (88%) Strand = Plus / Plus Query: 316 ctcccatgggacgtcaccaaccagcatccagtctcc 351 ||||||||| ||||| || ||| ||||||||||||| Sbjct: 33540 ctcccatggcacgtctccgacctgcatccagtctcc 33575
>dbj|AK102541.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033096K11, full insert sequence Length = 998 Score = 40.1 bits (20), Expect = 6.1 Identities = 32/36 (88%) Strand = Plus / Minus Query: 316 ctcccatgggacgtcaccaaccagcatccagtctcc 351 ||||||||| ||||| || ||| ||||||||||||| Sbjct: 573 ctcccatggcacgtctccgacctgcatccagtctcc 538
>gb|AY108311.1| Zea mays PCO113729 mRNA sequence Length = 1202 Score = 40.1 bits (20), Expect = 6.1 Identities = 50/60 (83%) Strand = Plus / Minus Query: 309 tgaacatctcccatgggacgtcaccaaccagcatccagtctccgtccttgtcttcgtagg 368 |||||||||||||||| ||||| || | ||||| ||| ||||||||||| ||||||| Sbjct: 643 tgaacatctcccatggcacgtcgccggcgagcatgaggtcgccgtccttgtcctcgtagg 584
>gb|AC138765.9| Mus musculus chromosome 15, clone RP23-30B1, complete sequence Length = 204614 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 432 tgaacattttctctagcccc 451 |||||||||||||||||||| Sbjct: 181482 tgaacattttctctagcccc 181463
>gb|AE017194.1| Bacillus cereus ATCC 10987, complete genome Length = 5224283 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 381 caccatcctttctgttctca 400 |||||||||||||||||||| Sbjct: 4690826 caccatcctttctgttctca 4690845
>gb|AF059607.1|AF059607 Lytechinus variegatus beta-C integrin subunit mRNA, complete cds Length = 2708 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 218 ttcttattcttggacttatc 237 |||||||||||||||||||| Sbjct: 41 ttcttattcttggacttatc 60 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,469,906 Number of Sequences: 3902068 Number of extensions: 3469906 Number of successful extensions: 55871 Number of sequences better than 10.0: 188 Number of HSP's better than 10.0 without gapping: 197 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 55250 Number of HSP's gapped (non-prelim): 609 length of query: 454 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 432 effective length of database: 17,147,199,772 effective search space: 7407590301504 effective search space used: 7407590301504 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)