ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd15o07 |
|---|---|
| Clone Library Name | barley_pub |
>YHG9_YEAST (P38758) Uncharacterized protein YHR009C| Length = 523 Score = 74.3 bits (181), Expect = 3e-13 Identities = 43/126 (34%), Positives = 67/126 (53%), Gaps = 5/126 (3%) Frame = -1 Query: 593 EVYICGMSKD-EQVPDDPATIAGEPDSIAMLHKIAGRVSSQLKTEEGAEVVAEQACYLPC 417 EVY+CG +P+ + + L+ ++S L ++ +QAC+LP Sbjct: 398 EVYVCGEGDTLVNIPESSDDVEVVSEKCDELYHYVSKLSPTLSK---GHLLRKQACFLPV 454 Query: 416 ----TDDGLPVIGEMPGVKGCYVATGHSCWGILNAPVTGAALAELILDGQAKIVDLAPFS 249 T G P+IGE VK Y+A+GHSCWGI NAP TG +AE++LDG+A +++ Sbjct: 455 LNVPTSSG-PLIGET-NVKDLYIASGHSCWGINNAPATGKLMAEILLDGEATSAEISSLD 512 Query: 248 PARFLN 231 P + + Sbjct: 513 PKLYFD 518
>YAM3_SCHPO (Q10058) Hypothetical protein C1F5.03c in chromosome I| Length = 382 Score = 71.2 bits (173), Expect = 3e-12 Identities = 41/117 (35%), Positives = 60/117 (51%), Gaps = 1/117 (0%) Frame = -1 Query: 593 EVYICGMSKDEQVPDDPATIAGEPDSIAMLHKIAGRVSSQLKTEEGAEVVAEQACYLPCT 414 E+Y+CG DE +P+ + + D A++ + A ++ + V QACYLP + Sbjct: 266 ELYVCGEFDDEPLPELSSDTKVDQDKCALIKQCANHFHQIIRD---SPVKVRQACYLPIS 322 Query: 413 D-DGLPVIGEMPGVKGCYVATGHSCWGILNAPVTGAALAELILDGQAKIVDLAPFSP 246 + G PVIG++ YVA H CWGI P TG L+ELILDG ++ P Sbjct: 323 NATGAPVIGKIGS--SIYVAAAHGCWGITLGPGTGKVLSELILDGAVTSANIDLLDP 377
>YURR_BACSU (O32159) Hypothetical oxidoreductase yurR (EC 1.-.-.-)| Length = 372 Score = 53.1 bits (126), Expect = 7e-07 Identities = 29/87 (33%), Positives = 45/87 (51%) Frame = -1 Query: 503 HKIAGRVSSQLKTEEGAEVVAEQACYLPCTDDGLPVIGEMPGVKGCYVATGHSCWGILNA 324 H++ + + A V + + P T LPV+G +P V+G Y A G G+ Sbjct: 283 HEVLSKALAVAPGLADAAAVETRVGFRPFTPGFLPVVGAVPNVQGLYAANGLGASGLTMG 342 Query: 323 PVTGAALAELILDGQAKIVDLAPFSPA 243 P GA LA+L+L Q ++ DL+P+ PA Sbjct: 343 PFLGAELAKLVLGKQTEL-DLSPYDPA 368
>Y4548_PSEAE (P33642) Probable D-amino acid oxidase PA4548| Length = 364 Score = 50.4 bits (119), Expect = 5e-06 Identities = 27/68 (39%), Positives = 42/68 (61%) Frame = -1 Query: 446 VAEQACYLPCTDDGLPVIGEMPGVKGCYVATGHSCWGILNAPVTGAALAELILDGQAKIV 267 VA A P + +G+P IG +PG G ++ TGH G++ AP + LA+L + G+ I+ Sbjct: 295 VAHWAGLRPGSPEGIPYIGPVPGFDGLWLNTGHYRNGLVLAPASCRLLADL-MSGREPII 353 Query: 266 DLAPFSPA 243 D AP++PA Sbjct: 354 DPAPYAPA 361
>GLOX_BACSU (O31616) Glycine oxidase (EC 1.4.3.19)| Length = 369 Score = 42.4 bits (98), Expect = 0.001 Identities = 32/110 (29%), Positives = 48/110 (43%) Frame = -1 Query: 614 VYPRPTGEVYICGMSKDEQVPDDPATIAGEPDSIAMLHKIAGRVSSQLKTEEGAEVVAEQ 435 + PR +G + + K P + PD + L + + + L + +V Sbjct: 247 IVPRKSGRLVVGATMK-------PGDWSETPD-LGGLESVMKKAKTMLPAIQNMKVDRFW 298 Query: 434 ACYLPCTDDGLPVIGEMPGVKGCYVATGHSCWGILNAPVTGAALAELILD 285 A P T DG P IG P A GH GIL AP TGA +++LI++ Sbjct: 299 AGLRPGTKDGKPYIGRHPEDSRILFAAGHFRNGILLAPATGALISDLIMN 348
>THIG_SYNY3 (Q55710) Bifunctional goxB/thiG protein [Includes: Glycine oxidase| (EC 1.5.3.-); Thiazole biosynthesis protein thiG] Length = 656 Score = 39.7 bits (91), Expect = 0.008 Identities = 26/65 (40%), Positives = 36/65 (55%) Frame = -1 Query: 428 YLPCTDDGLPVIGEMPGVKGCYVATGHSCWGILNAPVTGAALAELILDGQAKIVDLAPFS 249 + P T D P +G P +A GH GIL AP+T A +++LILD + + + FS Sbjct: 297 FRPGTPDEQPFLGYGP-CDNLILAIGHYRNGILLAPITAALISDLILDQKVSPL-IHAFS 354 Query: 248 PARFL 234 P RFL Sbjct: 355 PQRFL 359
>Y1751_PSEPK (Q88M24) UPF0209 protein PP1751| Length = 654 Score = 37.4 bits (85), Expect = 0.040 Identities = 33/136 (24%), Positives = 58/136 (42%), Gaps = 26/136 (19%) Frame = -1 Query: 629 CSTRKVYPRPTGEVYICGMSKDEQVPDDPATIAGEPDSIAMLHKIAGRVSSQLKTEE-GA 453 C+ V P GE + G S D D T+A ++A+L +I+ ++ +L E Sbjct: 488 CAEGYVAPPREGE-HTLGASFDFHSEDLAPTVAEHQGNLALLDEISVDLAQRLAVAELDP 546 Query: 452 EVVAEQACYLPCTDDGLPVIGEM-------------------------PGVKGCYVATGH 348 E + +A + + D LP++G + P + G YV +GH Sbjct: 547 EQLQGRAAFRCTSPDYLPIVGPIADAQAFAEAYAVLGRDARQVPDVPCPWLGGLYVNSGH 606 Query: 347 SCWGILNAPVTGAALA 300 G++ AP++G +A Sbjct: 607 GSRGLITAPLSGELVA 622
>M2GD_MOUSE (Q9DBT9) Dimethylglycine dehydrogenase, mitochondrial precursor (EC| 1.5.99.2) (ME2GLYDH) Length = 869 Score = 37.0 bits (84), Expect = 0.052 Identities = 28/79 (35%), Positives = 40/79 (50%) Frame = -1 Query: 473 LKTEEGAEVVAEQACYLPCTDDGLPVIGEMPGVKGCYVATGHSCWGILNAPVTGAALAEL 294 LK + VV Y P D LP++G GV+ +VATG +GI++A G L++ Sbjct: 352 LKKADIINVVNGPITYSP---DILPMVGPHQGVRNYWVATGFG-YGIIHAGGVGKFLSDW 407 Query: 293 ILDGQAKIVDLAPFSPARF 237 IL G+ DL P R+ Sbjct: 408 ILHGEPPF-DLIELDPNRY 425
>Y3456_PSEAE (Q9HYF0) UPF0209 protein PA3456| Length = 654 Score = 37.0 bits (84), Expect = 0.052 Identities = 32/139 (23%), Positives = 61/139 (43%), Gaps = 26/139 (18%) Frame = -1 Query: 629 CSTRKVYPRPTGEVYICGMSKDEQVPDDPATIAGEPDSIAMLHKIAGRVSSQLKTEE-GA 453 C+ V P P G+ + G S D + D T+A ++ +L +I+ + +L ++ Sbjct: 486 CAEGYVAP-PRGDEHTLGASFDFKSEDLAPTLAEHQGNLELLREISPDLLQRLGADDLPL 544 Query: 452 EVVAEQACYLPCTDDGLPVIGEM-------------------------PGVKGCYVATGH 348 E + +A + + D LP++G + P + G Y+ +GH Sbjct: 545 ERLEGRAAFRCTSPDYLPLVGPLAERAAFDEAYAVLARDARQVPERACPWLPGLYLNSGH 604 Query: 347 SCWGILNAPVTGAALAELI 291 G+++AP++G LA I Sbjct: 605 GSRGLISAPLSGELLAAWI 623
>THIG_ANASP (Q8YRC9) Bifunctional goxB/thiG protein [Includes: Glycine oxidase| (EC 1.5.3.-); Thiazole biosynthesis protein thiG] Length = 652 Score = 37.0 bits (84), Expect = 0.052 Identities = 20/48 (41%), Positives = 29/48 (60%) Frame = -1 Query: 428 YLPCTDDGLPVIGEMPGVKGCYVATGHSCWGILNAPVTGAALAELILD 285 + P T D LP++G +ATGH GIL AP+T A +A+LI++ Sbjct: 300 FRPATPDELPILGTSH-CPNLTLATGHYRNGILLAPITAALIADLIVE 346
>DADA1_RALSO (Q8Y0W7) D-amino acid dehydrogenase 1 small subunit (EC 1.4.99.1)| Length = 429 Score = 36.6 bits (83), Expect = 0.068 Identities = 21/63 (33%), Positives = 34/63 (53%) Frame = -1 Query: 422 PCTDDGLPVIGEMPGVKGCYVATGHSCWGILNAPVTGAALAELILDGQAKIVDLAPFSPA 243 P T DG P++G P V+G ++ TGH G A +G L++L+ G++ + S Sbjct: 356 PMTPDGTPIVGPTP-VRGLWINTGHGTLGWTMACGSGQLLSDLV-SGRSPAIRADDLSVY 413 Query: 242 RFL 234 R+L Sbjct: 414 RYL 416
>DADA_YERPE (Q8ZEL7) D-amino acid dehydrogenase small subunit (EC 1.4.99.1)| Length = 434 Score = 36.2 bits (82), Expect = 0.089 Identities = 20/52 (38%), Positives = 28/52 (53%) Frame = -1 Query: 422 PCTDDGLPVIGEMPGVKGCYVATGHSCWGILNAPVTGAALAELILDGQAKIV 267 P T DG P++G P +K Y+ TGH G A +G LA++I + IV Sbjct: 356 PMTPDGTPIVGRTP-LKNLYLNTGHGTLGWTMACGSGQLLADIIQGRRPAIV 406
>MTOX_SALTY (P58525) N-methyl-L-tryptophan oxidase (EC 1.5.3.-) (MTOX)| Length = 372 Score = 36.2 bits (82), Expect = 0.089 Identities = 25/65 (38%), Positives = 31/65 (47%), Gaps = 4/65 (6%) Frame = -1 Query: 419 CTDDGLP----VIGEMPGVKGCYVATGHSCWGILNAPVTGAALAELILDGQAKIVDLAPF 252 CT D P +I +PG + V TG S G APV G A+ L G+ DL PF Sbjct: 307 CTYDNSPDEDFIIDTLPGHENTLVITGLSGHGFKFAPVLGEIAADFAL-GKTPSFDLTPF 365 Query: 251 SPARF 237 +RF Sbjct: 366 RLSRF 370
>MTOX_SALTI (P58524) N-methyl-L-tryptophan oxidase (EC 1.5.3.-) (MTOX)| Length = 372 Score = 36.2 bits (82), Expect = 0.089 Identities = 25/65 (38%), Positives = 31/65 (47%), Gaps = 4/65 (6%) Frame = -1 Query: 419 CTDDGLP----VIGEMPGVKGCYVATGHSCWGILNAPVTGAALAELILDGQAKIVDLAPF 252 CT D P +I +PG + V TG S G APV G A+ L G+ DL PF Sbjct: 307 CTYDNSPDEDFIIDTLPGHENTLVITGLSGHGFKFAPVLGEIAADFAL-GKTPSFDLTPF 365 Query: 251 SPARF 237 +RF Sbjct: 366 RLSRF 370
>DADA2_RALSO (Q8XX54) D-amino acid dehydrogenase 2 small subunit (EC 1.4.99.1)| Length = 425 Score = 36.2 bits (82), Expect = 0.089 Identities = 25/78 (32%), Positives = 37/78 (47%) Frame = -1 Query: 473 LKTEEGAEVVAEQACYLPCTDDGLPVIGEMPGVKGCYVATGHSCWGILNAPVTGAALAEL 294 L+ + A A P T G+PV+G P V G ++ GH G A + LA+L Sbjct: 350 LRASDAGADAAPWAGMRPATPTGVPVVGPSP-VDGLWLNVGHGALGFTLAMGSAGLLADL 408 Query: 293 ILDGQAKIVDLAPFSPAR 240 I +A + AP++ AR Sbjct: 409 IA-RRAPAIAAAPYALAR 425
>DADA_XANCP (Q8P4Q9) D-amino acid dehydrogenase small subunit (EC 1.4.99.1)| Length = 429 Score = 35.8 bits (81), Expect = 0.12 Identities = 22/69 (31%), Positives = 34/69 (49%) Frame = -1 Query: 422 PCTDDGLPVIGEMPGVKGCYVATGHSCWGILNAPVTGAALAELILDGQAKIVDLAPFSPA 243 P T DG PV+G P ++ TGH G A +G LA+L + G+ +D Sbjct: 357 PATPDGTPVVGATP-YANLFLNTGHGTLGWTMACGSGRYLADL-MQGRTPEIDTEGLDVF 414 Query: 242 RFLNNKKSR 216 R+L+ + +R Sbjct: 415 RYLSTRSTR 423
>OOXB1_RHIME (Q92XP5) Opine oxidase subunit B (EC 1.-.-.-) (Octopine oxidase| subunit B) Length = 368 Score = 35.0 bits (79), Expect = 0.20 Identities = 27/77 (35%), Positives = 37/77 (48%), Gaps = 2/77 (2%) Frame = -1 Query: 521 DSIAMLHKIAGRVSSQLKTEEGAEVVAEQACYLPCTDDGLPVIGEMPGVKGCYVATGHS- 345 ++IA L +I RV L+ A ++ + DGLP+ E P + G YV T HS Sbjct: 278 ETIARLCRIGTRVFPALRA---ARLIRAWGALRIMSPDGLPIYEEAPEMPGAYVVTCHSG 334 Query: 344 -CWGILNAPVTGAALAE 297 L+A G ALAE Sbjct: 335 VTLASLHALELGPALAE 351
>M2GD_HUMAN (Q9UI17) Dimethylglycine dehydrogenase, mitochondrial precursor (EC| 1.5.99.2) (ME2GLYDH) Length = 866 Score = 35.0 bits (79), Expect = 0.20 Identities = 29/88 (32%), Positives = 42/88 (47%) Frame = -1 Query: 500 KIAGRVSSQLKTEEGAEVVAEQACYLPCTDDGLPVIGEMPGVKGCYVATGHSCWGILNAP 321 K A + LK + VV Y P D LP++G GV+ +VA G +GI++A Sbjct: 350 KAAMEMVPVLKKADIINVVNGPITYSP---DILPMVGPHQGVRNYWVAIGFG-YGIIHAG 405 Query: 320 VTGAALAELILDGQAKIVDLAPFSPARF 237 G L++ IL G+ DL P R+ Sbjct: 406 GVGKYLSDWILHGEPPF-DLIELDPNRY 432
>DADA_XYLFT (Q87AK0) D-amino acid dehydrogenase small subunit (EC 1.4.99.1)| Length = 435 Score = 34.7 bits (78), Expect = 0.26 Identities = 19/44 (43%), Positives = 25/44 (56%) Frame = -1 Query: 422 PCTDDGLPVIGEMPGVKGCYVATGHSCWGILNAPVTGAALAELI 291 P T DG PVIG P +G ++ TGH G + +G LA+LI Sbjct: 357 PATPDGTPVIGATP-YQGLFLNTGHGTLGWTMSSGSGRYLADLI 399
>DADA_XYLFA (Q9PF27) D-amino acid dehydrogenase small subunit (EC 1.4.99.1)| Length = 435 Score = 34.7 bits (78), Expect = 0.26 Identities = 19/44 (43%), Positives = 25/44 (56%) Frame = -1 Query: 422 PCTDDGLPVIGEMPGVKGCYVATGHSCWGILNAPVTGAALAELI 291 P T DG PVIG P +G ++ TGH G + +G LA+LI Sbjct: 357 PATPDGTPVIGATP-YQGLFLNTGHGTLGWTMSSGSGRYLADLI 399
>M2GD_RAT (Q63342) Dimethylglycine dehydrogenase, mitochondrial precursor (EC| 1.5.99.2) (ME2GLYDH) Length = 857 Score = 34.3 bits (77), Expect = 0.34 Identities = 26/79 (32%), Positives = 39/79 (49%) Frame = -1 Query: 473 LKTEEGAEVVAEQACYLPCTDDGLPVIGEMPGVKGCYVATGHSCWGILNAPVTGAALAEL 294 LK + +V Y P D LP++G GV+ +VA G +GI++A G L++ Sbjct: 352 LKKADIINIVNGPITYSP---DILPMVGPHQGVRNYWVAIGFG-YGIIHAGGVGKYLSDW 407 Query: 293 ILDGQAKIVDLAPFSPARF 237 IL G+ DL P R+ Sbjct: 408 ILHGEPPF-DLIELDPNRY 425
>Y1639_PSESM (Q886E0) UPF0209 protein PSPTO1639| Length = 660 Score = 34.3 bits (77), Expect = 0.34 Identities = 30/136 (22%), Positives = 56/136 (41%), Gaps = 26/136 (19%) Frame = -1 Query: 629 CSTRKVYPRPTGEVYICGMSKDEQVPDDPATIAGEPDSIAMLHKIAGRVSSQLKT-EEGA 453 C+ V P GE + G S D D +A ++ +L +I+ ++S+L+ + Sbjct: 492 CAEGYVAPARLGE-HTLGASFDFNSVDLTPNVADHLGNLTLLQEISADLASRLEAADRPP 550 Query: 452 EVVAEQACYLPCTDDGLPVIGEM-------------------------PGVKGCYVATGH 348 E + +A + + D LP++G + P + G YV +GH Sbjct: 551 EQLRGRAAFRCTSPDYLPIVGPLADREAFVQAYAALGKDARQVPDIACPWLDGLYVNSGH 610 Query: 347 SCWGILNAPVTGAALA 300 G++ AP+ +A Sbjct: 611 GSRGLITAPLCAELIA 626
>DADA_XANAC (Q8PGC9) D-amino acid dehydrogenase small subunit (EC 1.4.99.1)| Length = 429 Score = 33.9 bits (76), Expect = 0.44 Identities = 22/69 (31%), Positives = 33/69 (47%) Frame = -1 Query: 422 PCTDDGLPVIGEMPGVKGCYVATGHSCWGILNAPVTGAALAELILDGQAKIVDLAPFSPA 243 P T DG PV+G P ++ TGH G A +G LA+L + G+ +D Sbjct: 357 PATPDGTPVVGATP-YANLFLNTGHGTLGWTMACGSGRYLADL-MQGRTPEIDTEGLDVF 414 Query: 242 RFLNNKKSR 216 R+L+ + R Sbjct: 415 RYLSPRSVR 423
>MTOX_ECO57 (P58523) N-methyl-L-tryptophan oxidase (EC 1.5.3.-) (MTOX)| Length = 372 Score = 33.1 bits (74), Expect = 0.76 Identities = 39/146 (26%), Positives = 56/146 (38%), Gaps = 14/146 (9%) Frame = -1 Query: 632 RCSTRKVYPRPTGEVYICGMSKDEQVPDDPATIAGEPDSIAMLHKIAGRVSSQLKTEEGA 453 R S + +P TGE+ +D I G+ + ++H RV +G+ Sbjct: 228 RYSVKNKFPAFTGELPNGDQYYGFPAENDALKI-GKHNGGQVIHSADERVPFAEVVSDGS 286 Query: 452 EVVAEQACYLP----------CTDDGLP----VIGEMPGVKGCYVATGHSCWGILNAPVT 315 E LP CT D P +I +PG + TG S G A V Sbjct: 287 EAFPFLRNVLPGIGCCLYGAACTYDNSPDEDFIIDTLPGHDNTLLITGLSGHGFKFASVL 346 Query: 314 GAALAELILDGQAKIVDLAPFSPARF 237 G A+ D ++ DL PFS +RF Sbjct: 347 GEIAADFAQDKKSDF-DLTPFSLSRF 371
>DADA_PSESM (Q88BB6) D-amino acid dehydrogenase small subunit (EC 1.4.99.1)| Length = 433 Score = 33.1 bits (74), Expect = 0.76 Identities = 17/44 (38%), Positives = 25/44 (56%) Frame = -1 Query: 422 PCTDDGLPVIGEMPGVKGCYVATGHSCWGILNAPVTGAALAELI 291 P T DG P++G P ++ ++ TGH G A +G LA+LI Sbjct: 357 PTTPDGTPIVGATP-LRNLFLNTGHGTLGWTMACGSGRLLADLI 399
>DADA_VIBCH (Q9KTV1) D-amino acid dehydrogenase small subunit (EC 1.4.99.1)| Length = 421 Score = 32.7 bits (73), Expect = 0.99 Identities = 17/53 (32%), Positives = 27/53 (50%) Frame = -1 Query: 428 YLPCTDDGLPVIGEMPGVKGCYVATGHSCWGILNAPVTGAALAELILDGQAKI 270 + P T DG P+IG P Y TGH G A + + LA+++ G++ + Sbjct: 356 FRPMTPDGTPIIGATP-YTNLYTNTGHGTLGWTMACGSASILADVLTHGESPL 407
>ZC3H6_MOUSE (Q8BYK8) Zinc finger CCCH-type domain-containing protein 6| Length = 1177 Score = 32.7 bits (73), Expect = 0.99 Identities = 17/43 (39%), Positives = 24/43 (55%) Frame = +1 Query: 280 CPSRMSSASAAPVTGALRIPQQLCPVAT*HPFTPGISPMTGSP 408 CP RM S+ ++P G+ ++PQ C HP +PG P G P Sbjct: 466 CPQRMYSSESSPGPGS-KVPQG-CESPVRHPGSPGHHPCVGPP 506
>Y1942_CHRVO (Q7NWN9) UPF0209 protein CV_1942| Length = 660 Score = 32.3 bits (72), Expect = 1.3 Identities = 36/141 (25%), Positives = 58/141 (41%), Gaps = 28/141 (19%) Frame = -1 Query: 551 DDPATIAGE-PDSIAMLHKIAGRVSSQLKTEEGAEVVAEQACYLPCTDDGLPVIGEM--- 384 DD GE +++AML ++A + + L + E + +A + + D LP++G Sbjct: 514 DDLGVNDGEHAENLAMLAELAPSLRASLD-RDAPEHLDGRAAFRCTSPDYLPLVGPAVAA 572 Query: 383 ----------------------PGVKGCYVATGHSCWGILNAPVTGAALAELILDGQAKI 270 P +G YV H G++ AP++G LA L+ A + Sbjct: 573 RDFVHAYRELARDATLRPATACPWAEGLYVNAAHGSRGLITAPLSGEILASLLEGEPAPL 632 Query: 269 -VDL-APFSPARFLNNKKSRR 213 DL P+RFL RR Sbjct: 633 PADLMRAVHPSRFLLRDLIRR 653
>DADA_RHILV (Q9RAE6) D-amino acid dehydrogenase small subunit (EC 1.4.99.1)| Length = 416 Score = 31.6 bits (70), Expect = 2.2 Identities = 18/51 (35%), Positives = 26/51 (50%) Frame = -1 Query: 422 PCTDDGLPVIGEMPGVKGCYVATGHSCWGILNAPVTGAALAELILDGQAKI 270 P T DG PVIG V G ++ TGH G + + + +L+ GQ +I Sbjct: 356 PMTPDGTPVIGPTK-VAGLFLNTGHGTLGWTMSTGSARLIGDLVGGGQPEI 405
>DADA_SHIFL (Q7UCT6) D-amino acid dehydrogenase small subunit (EC 1.4.99.1)| Length = 432 Score = 31.6 bits (70), Expect = 2.2 Identities = 21/62 (33%), Positives = 30/62 (48%) Frame = -1 Query: 422 PCTDDGLPVIGEMPGVKGCYVATGHSCWGILNAPVTGAALAELILDGQAKIVDLAPFSPA 243 P T DG PV+G K ++ TGH G A +G L++L L G+ + S A Sbjct: 356 PMTPDGTPVVGS-TRFKNLWLNTGHGTLGWTMACGSGQLLSDL-LSGRTPAIPYEDLSVA 413 Query: 242 RF 237 R+ Sbjct: 414 RY 415
>DADA_ECOLI (P0A6J5) D-amino acid dehydrogenase small subunit (EC 1.4.99.1)| Length = 432 Score = 31.6 bits (70), Expect = 2.2 Identities = 21/62 (33%), Positives = 30/62 (48%) Frame = -1 Query: 422 PCTDDGLPVIGEMPGVKGCYVATGHSCWGILNAPVTGAALAELILDGQAKIVDLAPFSPA 243 P T DG PV+G K ++ TGH G A +G L++L L G+ + S A Sbjct: 356 PMTPDGTPVVGR-TRFKNLWLNTGHGTLGWTMACGSGQLLSDL-LSGRTPAIPYEDLSVA 413 Query: 242 RF 237 R+ Sbjct: 414 RY 415
>DADA_ECOL6 (P0A6J6) D-amino acid dehydrogenase small subunit (EC 1.4.99.1)| Length = 432 Score = 31.6 bits (70), Expect = 2.2 Identities = 21/62 (33%), Positives = 30/62 (48%) Frame = -1 Query: 422 PCTDDGLPVIGEMPGVKGCYVATGHSCWGILNAPVTGAALAELILDGQAKIVDLAPFSPA 243 P T DG PV+G K ++ TGH G A +G L++L L G+ + S A Sbjct: 356 PMTPDGTPVVGR-TRFKNLWLNTGHGTLGWTMACGSGQLLSDL-LSGRTPAIPYEDLSVA 413 Query: 242 RF 237 R+ Sbjct: 414 RY 415
>DADA_ECO57 (P0A6J7) D-amino acid dehydrogenase small subunit (EC 1.4.99.1)| Length = 432 Score = 31.6 bits (70), Expect = 2.2 Identities = 21/62 (33%), Positives = 30/62 (48%) Frame = -1 Query: 422 PCTDDGLPVIGEMPGVKGCYVATGHSCWGILNAPVTGAALAELILDGQAKIVDLAPFSPA 243 P T DG PV+G K ++ TGH G A +G L++L L G+ + S A Sbjct: 356 PMTPDGTPVVGR-TRFKNLWLNTGHGTLGWTMACGSGQLLSDL-LSGRTPAIPYEDLSVA 413 Query: 242 RF 237 R+ Sbjct: 414 RY 415
>MTOX_SHIFL (Q83RT9) N-methyl-L-tryptophan oxidase (EC 1.5.3.-) (MTOX)| Length = 372 Score = 31.6 bits (70), Expect = 2.2 Identities = 39/146 (26%), Positives = 54/146 (36%), Gaps = 14/146 (9%) Frame = -1 Query: 632 RCSTRKVYPRPTGEVYICGMSKDEQVPDDPATIAGEPDSIAMLHKIAGRVSSQLKTEEGA 453 R S + +P TGE+ +D I G+ + ++H RV +G+ Sbjct: 228 RYSVKNKFPAFTGELPNGDQYYGFPAENDALKI-GKHNGGQVIHSADERVPFAEVASDGS 286 Query: 452 EVVAEQACYLP----------CTDDGLP----VIGEMPGVKGCYVATGHSCWGILNAPVT 315 E LP CT D P +I +PG + TG S G A V Sbjct: 287 EAFPFLRNVLPGIGCCLYGAACTYDNSPDEDFIIDTLPGHDNTLLITGLSGHGFKFASVL 346 Query: 314 GAALAELILDGQAKIVDLAPFSPARF 237 G A+ D Q DL PF +RF Sbjct: 347 GEIAADFAQD-QKSDFDLTPFRLSRF 371
>Y1959_OCEIH (Q8EPX2) UPF0365 protein OB1959| Length = 330 Score = 31.2 bits (69), Expect = 2.9 Identities = 17/34 (50%), Positives = 23/34 (67%), Gaps = 2/34 (5%) Frame = +3 Query: 531 GNRCRIIWNLLVLAHSADVHLP--RGARVDLPGR 626 GN R++ N L+ AH A++ LP RGA +DL GR Sbjct: 86 GNVDRVV-NALIAAHRANIDLPFERGAAIDLAGR 118
>Y4SL_RHISN (P55655) Hypothetical protein y4sL| Length = 203 Score = 31.2 bits (69), Expect = 2.9 Identities = 18/62 (29%), Positives = 31/62 (50%) Frame = -1 Query: 422 PCTDDGLPVIGEMPGVKGCYVATGHSCWGILNAPVTGAALAELILDGQAKIVDLAPFSPA 243 P T DG PVIG + G ++ TGH G + + +A+L+ G+ +D + + Sbjct: 143 PMTPDGTPVIGPTK-IAGLFLNTGHGTLGWTMSSGSARVIADLV-SGRKPEIDATDLAVS 200 Query: 242 RF 237 R+ Sbjct: 201 RY 202
>DADA_SALTY (Q8ZP17) D-amino acid dehydrogenase small subunit (EC 1.4.99.1)| Length = 432 Score = 31.2 bits (69), Expect = 2.9 Identities = 21/62 (33%), Positives = 30/62 (48%) Frame = -1 Query: 422 PCTDDGLPVIGEMPGVKGCYVATGHSCWGILNAPVTGAALAELILDGQAKIVDLAPFSPA 243 P T DG PV+G K ++ TGH G A +G L++ IL G+ + S A Sbjct: 356 PMTPDGTPVVGR-TRYKNLWLNTGHGTLGWTMACGSGQLLSD-ILSGRTPAIPYDDLSVA 413 Query: 242 RF 237 R+ Sbjct: 414 RY 415
>DADA_SALTI (Q8Z687) D-amino acid dehydrogenase small subunit (EC 1.4.99.1)| Length = 432 Score = 31.2 bits (69), Expect = 2.9 Identities = 20/62 (32%), Positives = 31/62 (50%) Frame = -1 Query: 422 PCTDDGLPVIGEMPGVKGCYVATGHSCWGILNAPVTGAALAELILDGQAKIVDLAPFSPA 243 P T DG PV+G K ++ TGH G A +G L++++L G+ + S A Sbjct: 356 PMTPDGTPVVGR-TRYKNLWLNTGHGTLGWTMACGSGQLLSDILL-GRTPAIPYDDLSVA 413 Query: 242 RF 237 R+ Sbjct: 414 RY 415
>MTOX_ECOLI (P40874) N-methyl-L-tryptophan oxidase (EC 1.5.3.-) (MTOX)| Length = 372 Score = 31.2 bits (69), Expect = 2.9 Identities = 38/146 (26%), Positives = 55/146 (37%), Gaps = 14/146 (9%) Frame = -1 Query: 632 RCSTRKVYPRPTGEVYICGMSKDEQVPDDPATIAGEPDSIAMLHKIAGRVSSQLKTEEGA 453 R S + +P TGE+ +D I G+ + ++H RV +G+ Sbjct: 228 RYSVKNKFPAFTGELPNGDQYYGFPAENDALKI-GKHNGGQVIHSADERVPFAEVASDGS 286 Query: 452 EVVAEQACYLP----------CTDDGLP----VIGEMPGVKGCYVATGHSCWGILNAPVT 315 E LP CT D P +I +PG + TG S G A V Sbjct: 287 EAFPFLRNVLPGIGCCLYGAACTYDNSPDEDFIIDTLPGHDNTLLITGLSGHGFKFASVL 346 Query: 314 GAALAELILDGQAKIVDLAPFSPARF 237 G A+ D ++ DL PF +RF Sbjct: 347 GEIAADFAQDKKSDF-DLTPFRLSRF 371
>SOX_RABIT (P79371) Peroxisomal sarcosine oxidase (EC 1.5.3.1) (PSO)| (L-pipecolate oxidase) (EC 1.5.3.7) (L-pipecolic acid oxidase) Length = 390 Score = 30.8 bits (68), Expect = 3.7 Identities = 36/133 (27%), Positives = 48/133 (36%), Gaps = 7/133 (5%) Frame = -1 Query: 614 VYPRPTGEV-------YICGMSKDEQVPDDPATIAGEPDSIAMLHKIAGRVSSQLKTEEG 456 +Y PTGE Y G D + D P T + + +L LK E Sbjct: 256 IYGLPTGEYPGLMKVSYHHGNHADPEERDCP-TARTDIGDVQILSSFVRDHLPDLKPEPA 314 Query: 455 AEVVAEQACYLPCTDDGLPVIGEMPGVKGCYVATGHSCWGILNAPVTGAALAELILDGQA 276 ++C T D ++ P + G S G APV G L EL + Sbjct: 315 VI----ESCMYTNTPDEQFILDRHPKYDNIVIGAGFSGHGFKLAPVVGKILYELSMK-LT 369 Query: 275 KIVDLAPFSPARF 237 DLAPF +RF Sbjct: 370 PSYDLAPFRISRF 382
>SOX_HUMAN (Q9P0Z9) Peroxisomal sarcosine oxidase (EC 1.5.3.1) (PSO)| (L-pipecolate oxidase) (EC 1.5.3.7) (L-pipecolic acid oxidase) Length = 390 Score = 30.8 bits (68), Expect = 3.7 Identities = 36/133 (27%), Positives = 48/133 (36%), Gaps = 7/133 (5%) Frame = -1 Query: 614 VYPRPTGEV-------YICGMSKDEQVPDDPATIAGEPDSIAMLHKIAGRVSSQLKTEEG 456 +Y PTGE Y G D + D P T + + +L LK E Sbjct: 256 IYGLPTGEYPGLMKVSYHHGNHADPEERDCP-TARTDIGDVQILSSFVRDHLPDLKPEPA 314 Query: 455 AEVVAEQACYLPCTDDGLPVIGEMPGVKGCYVATGHSCWGILNAPVTGAALAELILDGQA 276 ++C T D ++ P + G S G APV G L EL + Sbjct: 315 VI----ESCMYTNTPDEQFILDRHPKYDNIVIGAGFSGHGFKLAPVVGKILYELSMK-LT 369 Query: 275 KIVDLAPFSPARF 237 DLAPF +RF Sbjct: 370 PSYDLAPFRISRF 382
>KP58_DROME (Q9VPC0) Serine/threonine-protein kinase PITSLRE (EC 2.7.11.22)| (Cell division cycle 2-like) Length = 952 Score = 30.8 bits (68), Expect = 3.7 Identities = 15/43 (34%), Positives = 22/43 (51%) Frame = -1 Query: 470 KTEEGAEVVAEQACYLPCTDDGLPVIGEMPGVKGCYVATGHSC 342 K +E + + EQ +PC D G+P+ PGV+GC C Sbjct: 521 KLKEKQKSLEEQ---IPCDDKGIPLPNYYPGVQGCRSVEEFQC 560
>DADA1_PSEPK (Q88EM0) D-amino acid dehydrogenase 1 small subunit (EC 1.4.99.1)| Length = 432 Score = 30.8 bits (68), Expect = 3.7 Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 4/69 (5%) Frame = -1 Query: 422 PCTDDGLPVIGEMPGVKGCYVATGHSCWGILNAPVTGAALAELILDGQAKI----VDLAP 255 P T DG P++G+ + ++ TGH G + +G LA+L+ + KI +D++ Sbjct: 357 PATPDGTPIVGKTK-YRNLFLNTGHGTLGWTMSCGSGRLLADLMAGKKPKISAKGLDISR 415 Query: 254 FSPARFLNN 228 +S + +N Sbjct: 416 YSNQKEAHN 424
>MSH3_MOUSE (P13705) DNA mismatch repair protein Msh3 (Repair-3 protein) (REP-1)| Length = 1091 Score = 30.4 bits (67), Expect = 4.9 Identities = 12/54 (22%), Positives = 26/54 (48%) Frame = -1 Query: 635 PRCSTRKVYPRPTGEVYICGMSKDEQVPDDPATIAGEPDSIAMLHKIAGRVSSQ 474 P C K YP G ++ + +++ D + PDS+ L++I ++++ Sbjct: 967 PVCELEKCYPEQVGNYHMGFLVNEDESKQDSGDMEQMPDSVTFLYQITRGIAAR 1020
>DADA2_PSEPK (Q88CB1) D-amino acid dehydrogenase 2 small subunit (EC 1.4.99.1)| Length = 434 Score = 30.0 bits (66), Expect = 6.4 Identities = 16/44 (36%), Positives = 23/44 (52%) Frame = -1 Query: 422 PCTDDGLPVIGEMPGVKGCYVATGHSCWGILNAPVTGAALAELI 291 P T DG P++G + ++ TGH G A +G LA+LI Sbjct: 357 PATPDGTPIVG-ATAFRNLFLNTGHGTLGWTMACGSGRLLADLI 399
>DADA_KLEAE (O30745) D-amino acid dehydrogenase small subunit (EC 1.4.99.1)| Length = 432 Score = 30.0 bits (66), Expect = 6.4 Identities = 19/62 (30%), Positives = 30/62 (48%) Frame = -1 Query: 422 PCTDDGLPVIGEMPGVKGCYVATGHSCWGILNAPVTGAALAELILDGQAKIVDLAPFSPA 243 P T DG PV+G K ++ TGH G A +G +++LI G+ + + A Sbjct: 356 PMTPDGTPVVGR-TAYKNLWLNTGHGTLGWTMACGSGQLISDLI-SGRTPAIPYDDLAVA 413 Query: 242 RF 237 R+ Sbjct: 414 RY 415
>RP1_MOUSE (P56716) Oxygen-regulated protein 1 (Retinitis pigmentosa RP1 protein| homolog) Length = 2095 Score = 29.6 bits (65), Expect = 8.3 Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 5/62 (8%) Frame = +3 Query: 384 HFPNDRQPVIGAREV----AGLFRDYLCALLCLELAGHPPSNLMKHCNGV-RLPGNRCRI 548 +F RQ + A +V + +DYL ALL L P+N KH NG+ ++PG+ + Sbjct: 1042 NFATKRQSIEVAIQVDTMGENVLKDYLPALLLRHLEAFVPNN-QKHQNGISQIPGSLAEV 1100 Query: 549 IW 554 ++ Sbjct: 1101 VF 1102
>RTJK_DROFU (P21329) RNA-directed DNA polymerase from mobile element jockey (EC| 2.7.7.49) (Reverse transcriptase) Length = 916 Score = 29.6 bits (65), Expect = 8.3 Identities = 26/78 (33%), Positives = 37/78 (47%), Gaps = 8/78 (10%) Frame = -1 Query: 476 QLKTEEGAEVVAEQACYLPCTDDGL--------PVIGEMPGVKGCYVATGHSCWGILNAP 321 QL+T EG V+A A YLP + + V+G G Y A H+ WG A Sbjct: 96 QLQTAEGPVVLA--AVYLPPRERWIRAEFESLFAVLGNKFIAGGDYNAK-HAWWGNSRAC 152 Query: 320 VTGAALAELILDGQAKIV 267 G L E++ +GQ +I+ Sbjct: 153 ARGKVLQEVVANGQYQIL 170
>GCSP_PHOLL (Q7N199) Glycine dehydrogenase [decarboxylating] (EC 1.4.4.2)| (Glycine decarboxylase) (Glycine cleavage system P-protein) Length = 958 Score = 29.6 bits (65), Expect = 8.3 Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 2/52 (3%) Frame = +3 Query: 192 PRITLHSAPALLV--VEKSCRAEGRKINDLGLPIEDELGECCTGNWSIEDPP 341 P ++ A L+V E + E + D L I E+G+ G WS+ED P Sbjct: 844 PTMSFPVAGTLMVEPTESESKVEIDRFVDAMLAIRAEIGKVAKGEWSLEDNP 895 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 107,190,220 Number of Sequences: 219361 Number of extensions: 2556187 Number of successful extensions: 7007 Number of sequences better than 10.0: 49 Number of HSP's better than 10.0 without gapping: 6604 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6998 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6314008338 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
