Clone Name | rbasd15o07 |
---|---|
Clone Library Name | barley_pub |
>dbj|AK105193.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-107-D11, full insert sequence Length = 1364 Score = 331 bits (167), Expect = 2e-87 Identities = 364/427 (85%), Gaps = 2/427 (0%) Strand = Plus / Minus Query: 232 ttgagaaatcttgccgggctgaagggcgcaagatcaacgatcttggcctgcccatcgagg 291 |||||||| ||||| |||||||| ||||| ||||| ||||||||||| | || |||||| Sbjct: 1175 ttgagaaaccttgctgggctgaacggcgcgagatcgacgatcttggcatcgccgtcgagg 1116 Query: 292 atgagctcggcgagtgctgcaccggtaactggagcattgaggatcccccagcagctgtgc 351 |||||||| ||||| || |||||||| |||||||||||||||||||||||||||||||| Sbjct: 1115 atgagctctgcgagagcggcaccggtggctggagcattgaggatcccccagcagctgtgc 1056 Query: 352 ccggttgcaacgtagcatcccttcaccccgggcatttccccaatgaccggcagcccgtca 411 ||||| || || ||||| |||||||| || ||||| ||||| || ||||||| |||||| Sbjct: 1055 ccggtggcgacatagcaacccttcactccaggcatctccccgatcaccggcaaaccgtca 996 Query: 412 tcggtgcacgggaggtagcaggcctgttccgcgactacctctgcgccctcctctgtcttg 471 ||||||||||| |||||||| ||||| ||||| || ||||| ||||| ||||| |||| Sbjct: 995 tcggtgcacggcaggtagcaagcctgctccgccaccacctccgcgccttcctccctcttc 936 Query: 472 agctggctggacaccctcccagcaatcttatgaagcattgcaatggagtcaggctccccg 531 ||||||| ||| |||||||| || ||||| || ||||| ||||| ||||| ||||| ||| Sbjct: 935 agctggccggaaaccctcccggcgatcttgtgcagcatcgcaattgagtccggctcaccg 876 Query: 532 gcaatcgttgccggatcatctggaacttgctcgtccttgctcattccgcagatgtacacc 591 | ||||| |||| ||||| || || | ||| |||||| ||||||| || ||||||||| Sbjct: 875 gtgatcgtctccgggtcatcgggcacctcctcatccttggtcattccacaaatgtacacc 816 Query: 592 tcccccgtggggcgcgggtagaccttccgggtcgagcatcttggcgccgggctncgggct 651 ||||| ||||| |||||||||||| |||||||||||||||||||||||||||| | |||| Sbjct: 815 tccccggtgggccgcgggtagacc-tccgggtcgagcatcttggcgccgggct-ctggct 758 Query: 652 ggtagct 658 ||||||| Sbjct: 757 ggtagct 751
>gb|AY105159.1| Zea mays PCO075778 mRNA sequence Length = 604 Score = 297 bits (150), Expect = 2e-77 Identities = 351/417 (84%), Gaps = 1/417 (0%) Strand = Plus / Plus Query: 232 ttgagaaatcttgccgggctgaagggcgcaagatcaacgatcttggcctgcccatcgagg 291 |||||||| |||||||||||||| ||| | |||||||||||||||| || || || ||| Sbjct: 182 ttgagaaaccttgccgggctgaaaggctcgagatcaacgatcttggacttgccgtccagg 241 Query: 292 atgagctcggcgagtgctgcaccggtaactggagcattgaggatcccccagcagctgtgc 351 |||||||||||||| ||||| ||||| | ||| |||||||||| |||||||||||||| Sbjct: 242 atgagctcggcgagggctgcgccggtggccggaccattgaggataccccagcagctgtgg 301 Query: 352 ccggttgcaacgtagcatcccttcaccccgggcatttccccaatgaccggcagcccgtca 411 || || || || ||||| || ||||| || || || ||||| ||||||||||||||||| Sbjct: 302 cccgtggccacatagcaccctttcacgcctggtatctccccgatgaccggcagcccgtcg 361 Query: 412 tcggtgcacgggaggtagcaggcctgttccgcgactacctctgcgccctcctctgtcttg 471 |||||||||| |||||||| ||||| |||||||| ||||| ||||||||||| |||| Sbjct: 362 gcggtgcacggcaggtagcacgcctgctccgcgaccacctcagcgccctcctccttcttc 421 Query: 472 agctggctggacaccctcccagcaatcttatgaagcattgcaatggagtcaggctccccg 531 |||||||||||||| | || || |||||||| ||||||||||| ||||| ||||| || Sbjct: 422 agctggctggacactttgcctgcgatcttatgcagcattgcaatcgagtctggctcgcct 481 Query: 532 gcaatcgttgccggatcatctggaacttgctcgtccttgctcattccgcagatgtacacc 591 | |||||||| || |||||||| | ||||||||||||||| || || ||||||||| Sbjct: 482 actatcgttgctgggtcatctggcgggttctcgtccttgctcatcccacatatgtacacc 541 Query: 592 tcccccgtggggcgcgggtagaccttccgggtcgagcatcttggcgccgggctncgg 648 ||||| ||||| |||||||| ||| || ||||||||||||||||||||||||| ||| Sbjct: 542 tccccggtgggccgcgggtacacc-tcggggtcgagcatcttggcgccgggctccgg 597
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 264 bits (133), Expect = 3e-67 Identities = 307/365 (84%) Strand = Plus / Minus Query: 232 ttgagaaatcttgccgggctgaagggcgcaagatcaacgatcttggcctgcccatcgagg 291 |||||||| ||||| |||||||| ||||| ||||| ||||||||||| | || |||||| Sbjct: 2978646 ttgagaaaccttgctgggctgaacggcgcgagatcgacgatcttggcatcgccgtcgagg 2978587 Query: 292 atgagctcggcgagtgctgcaccggtaactggagcattgaggatcccccagcagctgtgc 351 |||||||| ||||| || |||||||| |||||||||||||||||||||||||||||||| Sbjct: 2978586 atgagctctgcgagagcggcaccggtggctggagcattgaggatcccccagcagctgtgc 2978527 Query: 352 ccggttgcaacgtagcatcccttcaccccgggcatttccccaatgaccggcagcccgtca 411 ||||| || || ||||| |||||||| || ||||| ||||| || ||||||| |||||| Sbjct: 2978526 ccggtggcgacatagcaacccttcactccaggcatctccccgatcaccggcaaaccgtca 2978467 Query: 412 tcggtgcacgggaggtagcaggcctgttccgcgactacctctgcgccctcctctgtcttg 471 ||||||||||| |||||||| ||||| ||||| || ||||| ||||| ||||| |||| Sbjct: 2978466 tcggtgcacggcaggtagcaagcctgctccgccaccacctccgcgccttcctccctcttc 2978407 Query: 472 agctggctggacaccctcccagcaatcttatgaagcattgcaatggagtcaggctccccg 531 ||||||| ||| |||||||| || ||||| || ||||| ||||| ||||| ||||| ||| Sbjct: 2978406 agctggccggaaaccctcccggcgatcttgtgcagcatcgcaattgagtccggctcaccg 2978347 Query: 532 gcaatcgttgccggatcatctggaacttgctcgtccttgctcattccgcagatgtacacc 591 | ||||| |||| ||||| || || | ||| |||||| ||||||| || ||||||||| Sbjct: 2978346 gtgatcgtctccgggtcatcgggcacctcctcatccttggtcattccacaaatgtacacc 2978287 Query: 592 tcccc 596 ||||| Sbjct: 2978286 tcccc 2978282 Score = 73.8 bits (37), Expect = 6e-10 Identities = 57/61 (93%), Gaps = 2/61 (3%) Strand = Plus / Minus Query: 598 gtggggcgcgggtagaccttccgggtcgagcatcttggcgccgggctncgggctggtagc 657 ||||| ||||||||||||| ||||||||||||||||||||||||||| | |||||||||| Sbjct: 2978187 gtgggccgcgggtagacct-ccgggtcgagcatcttggcgccgggct-ctggctggtagc 2978130 Query: 658 t 658 | Sbjct: 2978129 t 2978129
>dbj|AP005409.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0024L18 Length = 150128 Score = 264 bits (133), Expect = 3e-67 Identities = 307/365 (84%) Strand = Plus / Minus Query: 232 ttgagaaatcttgccgggctgaagggcgcaagatcaacgatcttggcctgcccatcgagg 291 |||||||| ||||| |||||||| ||||| ||||| ||||||||||| | || |||||| Sbjct: 24701 ttgagaaaccttgctgggctgaacggcgcgagatcgacgatcttggcatcgccgtcgagg 24642 Query: 292 atgagctcggcgagtgctgcaccggtaactggagcattgaggatcccccagcagctgtgc 351 |||||||| ||||| || |||||||| |||||||||||||||||||||||||||||||| Sbjct: 24641 atgagctctgcgagagcggcaccggtggctggagcattgaggatcccccagcagctgtgc 24582 Query: 352 ccggttgcaacgtagcatcccttcaccccgggcatttccccaatgaccggcagcccgtca 411 ||||| || || ||||| |||||||| || ||||| ||||| || ||||||| |||||| Sbjct: 24581 ccggtggcgacatagcaacccttcactccaggcatctccccgatcaccggcaaaccgtca 24522 Query: 412 tcggtgcacgggaggtagcaggcctgttccgcgactacctctgcgccctcctctgtcttg 471 ||||||||||| |||||||| ||||| ||||| || ||||| ||||| ||||| |||| Sbjct: 24521 tcggtgcacggcaggtagcaagcctgctccgccaccacctccgcgccttcctccctcttc 24462 Query: 472 agctggctggacaccctcccagcaatcttatgaagcattgcaatggagtcaggctccccg 531 ||||||| ||| |||||||| || ||||| || ||||| ||||| ||||| ||||| ||| Sbjct: 24461 agctggccggaaaccctcccggcgatcttgtgcagcatcgcaattgagtccggctcaccg 24402 Query: 532 gcaatcgttgccggatcatctggaacttgctcgtccttgctcattccgcagatgtacacc 591 | ||||| |||| ||||| || || | ||| |||||| ||||||| || ||||||||| Sbjct: 24401 gtgatcgtctccgggtcatcgggcacctcctcatccttggtcattccacaaatgtacacc 24342 Query: 592 tcccc 596 ||||| Sbjct: 24341 tcccc 24337 Score = 73.8 bits (37), Expect = 6e-10 Identities = 57/61 (93%), Gaps = 2/61 (3%) Strand = Plus / Minus Query: 598 gtggggcgcgggtagaccttccgggtcgagcatcttggcgccgggctncgggctggtagc 657 ||||| ||||||||||||| ||||||||||||||||||||||||||| | |||||||||| Sbjct: 24242 gtgggccgcgggtagacct-ccgggtcgagcatcttggcgccgggct-ctggctggtagc 24185 Query: 658 t 658 | Sbjct: 24184 t 24184
>gb|BT017394.1| Zea mays clone EL01N0327H09.c mRNA sequence Length = 711 Score = 246 bits (124), Expect = 8e-62 Identities = 353/427 (82%), Gaps = 2/427 (0%) Strand = Plus / Minus Query: 232 ttgagaaatcttgccgggctgaagggcgcaagatcaacgatcttggcctgcccatcgagg 291 |||||||| |||||||||||||| ||| | |||||||||||||||| || || || ||| Sbjct: 652 ttgagaaaccttgccgggctgaaaggctcgagatcaacgatcttggacttgccgtccagg 593 Query: 292 atgagctcggcgagtgctgcaccggtaactggagcattgaggatcccccagcagctgtgc 351 |||||||||||||| ||||| ||||| | ||| |||||||||| |||||||||||||| Sbjct: 592 atgagctcggcgagggctgcgccggtggccggaccattgaggataccccagcagctgtgg 533 Query: 352 ccggttgcaacgtagcatcccttcaccccgggcatttccccaatgaccggcagcccgtca 411 || || || || ||||| || ||||| || || || ||||| ||||||||||||||||| Sbjct: 532 cccgtggccacatagcaccctttcacgcctggtatctccccgatgaccggcagcccgtcg 473 Query: 412 tcggtgcacgggaggtagcaggcctgttccgcgactacctctgcgccctcctctgtcttg 471 |||||||||| |||||||| ||||| |||||||| ||||| ||||||||||| |||| Sbjct: 472 gcggtgcacggcaggtagcacgcctgctccgcgaccacctcagcgccctcctccttcttc 413 Query: 472 agctggctggacaccctcccagcaatcttatgaagcattgcaatggagtcaggctccccg 531 |||||||||||||| | || || |||||||| ||||||||||| ||||| ||||| || Sbjct: 412 agctggctggacactttgcctgcgatcttatgcagcattgcaatcgagtctggctcgcct 353 Query: 532 gcaatcgttgccggatcatctggaacttgctcgtccttgctcattccgcagatgtacacc 591 | |||||||| || |||||||| | ||| |||| |||||| || || ||||||||| Sbjct: 352 actatcgttgctgggtcatctggcgggttctcctcctagctcatcccacatatgtacacc 293 Query: 592 tcccccgtggggcgcgggtagaccttccgggtcgagcatcttggcgccgggctncgggct 651 ||| || |||||||| ||| || ||||||||||||||||||||||||| | |||| Sbjct: 292 tccaaaaaaggccgcgggtacacc-tcggggtcgagcatcttggcgccgggctcc-ggct 235 Query: 652 ggtagct 658 ||||||| Sbjct: 234 ggtagct 228
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 135 bits (68), Expect = 2e-28 Identities = 170/204 (83%) Strand = Plus / Plus Query: 288 gaggatgagctcggcgagtgctgcaccggtaactggagcattgaggatcccccagcagct 347 |||||||||||| ||||| || || ||||| | ||||| |||||||| ||||| | || Sbjct: 23298054 gaggatgagctccgcgagcgcagcgccggtggccggagcgttgaggattccccacccgcc 23298113 Query: 348 gtgcccggttgcaacgtagcatcccttcaccccgggcatttccccaatgaccggcagccc 407 ||||||||| || |||||||| ||||||||||| ||||| || || || ||||||| ||| Sbjct: 23298114 gtgcccggtggcgacgtagcaacccttcaccccaggcatctctccgatcaccggcaaccc 23298173 Query: 408 gtcatcggtgcacgggaggtagcaggcctgttccgcgactacctctgcgccctcctctgt 467 |||| ||||||||| | |||||| ||||| ||||| || ||||| ||||| ||||| | Sbjct: 23298174 gtcactggtgcacggcatgtagcaagcctgctccgccaccacctccgcgccttcctccct 23298233 Query: 468 cttgagctggctggacaccctccc 491 ||| |||||||||||||||||||| Sbjct: 23298234 cttcagctggctggacaccctccc 23298257 Score = 56.0 bits (28), Expect = 2e-04 Identities = 46/51 (90%), Gaps = 1/51 (1%) Strand = Plus / Plus Query: 598 gtggggcgcgggtagaccttccgggtcgagcatcttggcgccgggctncgg 648 ||||| |||||||||| || ||||| ||||||||||||||||||||| ||| Sbjct: 23298464 gtgggccgcgggtagatct-ccggggcgagcatcttggcgccgggctccgg 23298513
>dbj|AP003333.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1103C09 Length = 163996 Score = 135 bits (68), Expect = 2e-28 Identities = 170/204 (83%) Strand = Plus / Plus Query: 288 gaggatgagctcggcgagtgctgcaccggtaactggagcattgaggatcccccagcagct 347 |||||||||||| ||||| || || ||||| | ||||| |||||||| ||||| | || Sbjct: 23752 gaggatgagctccgcgagcgcagcgccggtggccggagcgttgaggattccccacccgcc 23811 Query: 348 gtgcccggttgcaacgtagcatcccttcaccccgggcatttccccaatgaccggcagccc 407 ||||||||| || |||||||| ||||||||||| ||||| || || || ||||||| ||| Sbjct: 23812 gtgcccggtggcgacgtagcaacccttcaccccaggcatctctccgatcaccggcaaccc 23871 Query: 408 gtcatcggtgcacgggaggtagcaggcctgttccgcgactacctctgcgccctcctctgt 467 |||| ||||||||| | |||||| ||||| ||||| || ||||| ||||| ||||| | Sbjct: 23872 gtcactggtgcacggcatgtagcaagcctgctccgccaccacctccgcgccttcctccct 23931 Query: 468 cttgagctggctggacaccctccc 491 ||| |||||||||||||||||||| Sbjct: 23932 cttcagctggctggacaccctccc 23955 Score = 56.0 bits (28), Expect = 2e-04 Identities = 46/51 (90%), Gaps = 1/51 (1%) Strand = Plus / Plus Query: 598 gtggggcgcgggtagaccttccgggtcgagcatcttggcgccgggctncgg 648 ||||| |||||||||| || ||||| ||||||||||||||||||||| ||| Sbjct: 24162 gtgggccgcgggtagatct-ccggggcgagcatcttggcgccgggctccgg 24211
>dbj|AP003253.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0451D05 Length = 148381 Score = 135 bits (68), Expect = 2e-28 Identities = 170/204 (83%) Strand = Plus / Plus Query: 288 gaggatgagctcggcgagtgctgcaccggtaactggagcattgaggatcccccagcagct 347 |||||||||||| ||||| || || ||||| | ||||| |||||||| ||||| | || Sbjct: 84796 gaggatgagctccgcgagcgcagcgccggtggccggagcgttgaggattccccacccgcc 84855 Query: 348 gtgcccggttgcaacgtagcatcccttcaccccgggcatttccccaatgaccggcagccc 407 ||||||||| || |||||||| ||||||||||| ||||| || || || ||||||| ||| Sbjct: 84856 gtgcccggtggcgacgtagcaacccttcaccccaggcatctctccgatcaccggcaaccc 84915 Query: 408 gtcatcggtgcacgggaggtagcaggcctgttccgcgactacctctgcgccctcctctgt 467 |||| ||||||||| | |||||| ||||| ||||| || ||||| ||||| ||||| | Sbjct: 84916 gtcactggtgcacggcatgtagcaagcctgctccgccaccacctccgcgccttcctccct 84975 Query: 468 cttgagctggctggacaccctccc 491 ||| |||||||||||||||||||| Sbjct: 84976 cttcagctggctggacaccctccc 84999 Score = 56.0 bits (28), Expect = 2e-04 Identities = 46/51 (90%), Gaps = 1/51 (1%) Strand = Plus / Plus Query: 598 gtggggcgcgggtagaccttccgggtcgagcatcttggcgccgggctncgg 648 ||||| |||||||||| || ||||| ||||||||||||||||||||| ||| Sbjct: 85206 gtgggccgcgggtagatct-ccggggcgagcatcttggcgccgggctccgg 85255
>gb|AC112676.8| Mus musculus chromosome 9, clone RP23-174F7, complete sequence Length = 230293 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 330 gaggatcccccagcagctgtgcc 352 ||||||||||||||||||||||| Sbjct: 190376 gaggatcccccagcagctgtgcc 190398
>dbj|AP002833.3| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-688I9, complete sequence Length = 175562 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 454 gcgccctcctctgtcttgagc 474 ||||||||||||||||||||| Sbjct: 118037 gcgccctcctctgtcttgagc 118017
>gb|BC068332.1| Danio rerio zgc:85626, mRNA (cDNA clone MGC:85626 IMAGE:6525318), complete cds Length = 1888 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 agtgttgaaggtttatttat 60 |||||||||||||||||||| Sbjct: 1565 agtgttgaaggtttatttat 1546
>ref|XM_656096.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN3584.2), mRNA Length = 1464 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 288 gaggatgagctcggcgagtg 307 |||||||||||||||||||| Sbjct: 129 gaggatgagctcggcgagtg 148
>gb|AC184077.2| Populus trichocarpa clone Pop1-53L15, complete sequence Length = 28233 Score = 40.1 bits (20), Expect = 9.0 Identities = 47/56 (83%) Strand = Plus / Minus Query: 337 ccccagcagctgtgcccggttgcaacgtagcatcccttcaccccgggcatttcccc 392 ||||| ||| ||||||| || ||||| || || |||||||||||||| || ||||| Sbjct: 16855 ccccaacagttgtgcccagtggcaacataacaacccttcaccccgggaatctcccc 16800
>emb|AL772148.6| Zebrafish DNA sequence from clone CH211-153C20 in linkage group 24 Contains part of a novel gene similar to human DECR2 (peroxisomal 2,4-dienoyl CoA reductase 2), a novel gene similar to human KIAA0665, a novel gene similar to human KIAA0683, a novel gene similar to human KIAA0590, part of a novel gene and three CpG islands, complete sequence Length = 161218 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 agtgttgaaggtttatttat 60 |||||||||||||||||||| Sbjct: 153628 agtgttgaaggtttatttat 153647
>emb|BX897741.9| Zebrafish DNA sequence from clone DKEY-273O13 in linkage group 5, complete sequence Length = 168673 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 221 tcttcttgttgttgagaaat 240 |||||||||||||||||||| Sbjct: 22893 tcttcttgttgttgagaaat 22874
>gb|AC104450.2| Homo sapiens chromosome 3 clone RP11-493K19, complete sequence Length = 217337 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 470 tgagctggctggacaccctc 489 |||||||||||||||||||| Sbjct: 86896 tgagctggctggacaccctc 86915
>gb|AF291662.1| Aspergillus nidulans Kex2-like dibasic endoprotease ANPC gene, complete cds Length = 4688 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 288 gaggatgagctcggcgagtg 307 |||||||||||||||||||| Sbjct: 3889 gaggatgagctcggcgagtg 3908
>ref|XM_681635.1| PREDICTED: Danio rerio similar to 2,4-dienoyl CoA reductase 2, peroxisomal, transcript variant 1 (LOC573514), mRNA Length = 1848 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 agtgttgaaggtttatttat 60 |||||||||||||||||||| Sbjct: 1583 agtgttgaaggtttatttat 1564
>ref|XM_703423.1| PREDICTED: Danio rerio similar to 2,4-dienoyl CoA reductase 2, peroxisomal, transcript variant 2 (LOC573514), mRNA Length = 1796 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 agtgttgaaggtttatttat 60 |||||||||||||||||||| Sbjct: 1531 agtgttgaaggtttatttat 1512
>ref|XM_681286.1| PREDICTED: Danio rerio similar to 2,4-dienoyl CoA reductase 2, peroxisomal, transcript variant 1 (LOC573411), mRNA Length = 1846 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 agtgttgaaggtttatttat 60 |||||||||||||||||||| Sbjct: 1581 agtgttgaaggtttatttat 1562
>ref|XM_703300.1| PREDICTED: Danio rerio similar to 2,4-dienoyl CoA reductase 2, peroxisomal, transcript variant 2 (LOC573411), mRNA Length = 1794 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 agtgttgaaggtttatttat 60 |||||||||||||||||||| Sbjct: 1529 agtgttgaaggtttatttat 1510
>ref|NM_213321.1| Danio rerio zgc:85626 (zgc:85626), mRNA Length = 1888 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 agtgttgaaggtttatttat 60 |||||||||||||||||||| Sbjct: 1565 agtgttgaaggtttatttat 1546
>gb|AC009490.10| Homo sapiens BAC clone RP11-355A23 from 2, complete sequence Length = 158692 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 223 ttcttgttgttgagaaatct 242 |||||||||||||||||||| Sbjct: 68733 ttcttgttgttgagaaatct 68714
>emb|BX322785.6| Zebrafish DNA sequence from clone DKEYP-78B1 in linkage group 24, complete sequence Length = 176602 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 agtgttgaaggtttatttat 60 |||||||||||||||||||| Sbjct: 37735 agtgttgaaggtttatttat 37716
>gb|AC151747.3| Ornithorhynchus anatinus chromosome UNK clone OABb-520P24, complete sequence Length = 142317 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 99 tacattatttgatttggtgtcccc 122 ||||||||||||||| |||||||| Sbjct: 3519 tacattatttgattttgtgtcccc 3496
>gb|AC004814.2|AC004814 Homo sapiens clone 3938P1, complete sequence Length = 83030 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 470 tgagctggctggacaccctc 489 |||||||||||||||||||| Sbjct: 8137 tgagctggctggacaccctc 8156
>emb|AL954147.12| Zebrafish DNA sequence from clone CH211-117H23 in linkage group 24, complete sequence Length = 188067 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 agtgttgaaggtttatttat 60 |||||||||||||||||||| Sbjct: 112391 agtgttgaaggtttatttat 112372 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,523,508 Number of Sequences: 3902068 Number of extensions: 4523508 Number of successful extensions: 76046 Number of sequences better than 10.0: 27 Number of HSP's better than 10.0 without gapping: 27 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 75937 Number of HSP's gapped (non-prelim): 104 length of query: 659 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 636 effective length of database: 17,143,297,704 effective search space: 10903137339744 effective search space used: 10903137339744 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)